BLASTX nr result

ID: Mentha28_contig00034805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00034805
         (466 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]    60   3e-07
dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. ru...    58   1e-06

>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
          Length = 1409

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
 Frame = +3

Query: 78  AQMSRGRGNAPHQTS-------TPRTMHRPPGGGGKEDKNSLWCSHCGKTRHTRETCFLR 236
           A +SRG     HQ S        P T  +P G GG        C+HCG T+HT+ETCF  
Sbjct: 254 AMLSRGXHKPQHQLSFQTPSNGKPNTTTKPKGEGGG-------CTHCGNTKHTKETCFKL 306

Query: 237 VGYPEW*EEKKTKPQAKLAMG 299
            GYP+W  E K K + + + G
Sbjct: 307 HGYPDWWHELKAKKKREASGG 327


>dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = +3

Query: 39  EPSSGSDIGHGYRAQMSRGRGNAPHQTSTPRTMH--RPPGGGGKEDKNSLWCSHCGKTRH 212
           E  S   IG G   + + G+G       T R+M+  R      + DK++L C HCGK  H
Sbjct: 254 EQISSLGIGQGLTVKPATGKGRGK---GTDRSMNTIRSNNASSRMDKSNLLCEHCGKKGH 310

Query: 213 TRETCFLRVGYPEW*EEKK-TKPQAKLA 293
           +RE CF   GYPEW E K+ T  Q K A
Sbjct: 311 SREKCFQIHGYPEWWEGKRITTGQGKTA 338


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