BLASTX nr result

ID: Mentha28_contig00034433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00034433
         (579 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU32229.1| hypothetical protein MIMGU_mgv1a001432mg [Mimulus...   115   7e-24
ref|XP_006339696.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   1e-06
ref|XP_006339695.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   1e-06
ref|XP_004231213.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   2e-06

>gb|EYU32229.1| hypothetical protein MIMGU_mgv1a001432mg [Mimulus guttatus]
          Length = 820

 Score =  115 bits (289), Expect = 7e-24
 Identities = 61/119 (51%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
 Frame = +1

Query: 91  MTSRIAPFHPILRPILCEVFPHRLQFHFFRPANLQRRLLLSRLPVISPVPLGTFGFSTRS 270
           M S ++PFHPILRPI   V P +L++HF    NLQR LLL+R   + P PLG   FSTRS
Sbjct: 1   MPSTLSPFHPILRPIFSGVLPQKLRYHFLATRNLQRSLLLTRAESLIPAPLGNSSFSTRS 60

Query: 271 GRDRM---TXXXXXXXXXXXXXXLIDDEADLSDWVSGLKSDSFKKTRVYSDTEDDDNKK 438
           GR+ +                  LIDDEADLSDWVSGL S SF KTRVYS++E +D+ +
Sbjct: 61  GRESIGSGFGQGVRAGSSSSSKSLIDDEADLSDWVSGLNSKSFMKTRVYSESEREDDDR 119


>ref|XP_006339696.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like isoform X2
           [Solanum tuberosum]
          Length = 869

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = +1

Query: 130 PILCEVFPHRLQFHFFRPANLQRRLLLSRLPVISPVPLGTFGFSTRSGRDRMTXXXXXXX 309
           P+   +FPH+L++                 P+++        FS+RSGR R         
Sbjct: 36  PVFSRMFPHKLKYRSIG------------FPILAAQEQELRRFSSRSGRPR----PGSGA 79

Query: 310 XXXXXXXLIDDEADLSDWVSGLKSD-SFKKTRVYSDTEDDDNKK 438
                  LI+DEA+LSDWVSGL+SD SF KT+VYS+++D++  +
Sbjct: 80  DVRVSKSLIEDEAELSDWVSGLRSDSSFTKTQVYSESDDNEGDR 123


>ref|XP_006339695.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like isoform X1
           [Solanum tuberosum]
          Length = 894

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = +1

Query: 130 PILCEVFPHRLQFHFFRPANLQRRLLLSRLPVISPVPLGTFGFSTRSGRDRMTXXXXXXX 309
           P+   +FPH+L++                 P+++        FS+RSGR R         
Sbjct: 36  PVFSRMFPHKLKYRSIG------------FPILAAQEQELRRFSSRSGRPR----PGSGA 79

Query: 310 XXXXXXXLIDDEADLSDWVSGLKSD-SFKKTRVYSDTEDDDNKK 438
                  LI+DEA+LSDWVSGL+SD SF KT+VYS+++D++  +
Sbjct: 80  DVRVSKSLIEDEAELSDWVSGLRSDSSFTKTQVYSESDDNEGDR 123


>ref|XP_004231213.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like [Solanum
           lycopersicum]
          Length = 841

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = +1

Query: 130 PILCEVFPHRLQFHFFRPANLQRRLLLSRLPVISPVPLGTFGFSTRSGRDRMTXXXXXXX 309
           P    +FPH+L++                 P+++        FS+RSGR R         
Sbjct: 36  PAFSRMFPHKLKYRSIA------------FPILAAQEQELRRFSSRSGRPR----PGSGA 79

Query: 310 XXXXXXXLIDDEADLSDWVSGLKSD-SFKKTRVYSDTEDDDNKK 438
                  LI+DEA+LSDWVSGL+SD SF KT+VYS+++D++  +
Sbjct: 80  DVRVSKSLIEDEAELSDWVSGLRSDSSFTKTQVYSESDDNEGDR 123


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