BLASTX nr result

ID: Mentha28_contig00034377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00034377
         (523 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45590.1| hypothetical protein MIMGU_mgv1a002079mg [Mimulus...    76   6e-12
ref|XP_002314392.2| transcription activation domain-interacting ...    59   7e-07

>gb|EYU45590.1| hypothetical protein MIMGU_mgv1a002079mg [Mimulus guttatus]
          Length = 718

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 60/166 (36%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
 Frame = -2

Query: 492 ELSDNGG---IPVMGNIGPDTQLAAEAMGDLCLELHLDEISKSGYKGVYSPEKAATQKKL 322
           ELS+N     +P   +IGPDTQLAAEAM +LC E+ L E +++  K              
Sbjct: 195 ELSENDANEDVPKTVDIGPDTQLAAEAMENLCFEVQLPESNRASKK-------------- 240

Query: 321 RNRTVHSEEHLLYSTSVGVVTRQAKRTKRITTRNSSGSSLPPNQCRITKNTDDGALEKAE 142
                       Y  SVGV+TRQAK+ KR +   S+  S  P   + T+       ++  
Sbjct: 241 ----------RSYIASVGVLTRQAKQLKRASIGASNEHSPTPELPKRTR-------KRRN 283

Query: 141 QGRMEAESPGQRSGTSDR-EDKLDFSVPVAHRTRRSTNLSCSKVPA 7
              +E ES  Q S      ED+L F+VPVAHRTR+ T L+  K  A
Sbjct: 284 TMPLETESTVQMSEKKRHFEDQLGFAVPVAHRTRKCTKLNRPKATA 329


>ref|XP_002314392.2| transcription activation domain-interacting family protein [Populus
            trichocarpa] gi|550328889|gb|EEF00563.2| transcription
            activation domain-interacting family protein [Populus
            trichocarpa]
          Length = 1102

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
 Frame = -2

Query: 516  QLHEVPRRELSDNGGIPVMGNIGPDTQLAAEAMGDLCLELHLDEIS----KSGYKGVYSP 349
            QL  + R+E      +P M +IG DTQ+AAEAM  L    H + I+      G +     
Sbjct: 469  QLEALTRKE------VPEMLDIGLDTQMAAEAMEAL---FHGEGIAYDATNDGQQIPAVN 519

Query: 348  EKAATQKKLRNR---TVHSEEHLLYSTS-VGVVTRQAKRTKRITTRNSSGSSLPPNQC-- 187
             K   +  LR++   ++HS++H L +   +GV T Q+K+T +I+ +    S  P  +C  
Sbjct: 520  SKDLMEGSLRSKAKKSIHSKQHSLSNNEDIGVTTHQSKKTLKISAKLGKQSLTPSQKCPE 579

Query: 186  RITKNTD-DGALEKAEQGRMEA-----------ESPGQRS-GTSDREDKLDFSVPVAHRT 46
             + K  D D  + ++++ R +A            S G RS    D   +L  S PVAHRT
Sbjct: 580  NVRKECDMDVVMTRSKRARSDAGLDELDRCNGTASRGHRSVKKQDLPVELATSTPVAHRT 639

Query: 45   RRSTNLSCSKVPAN 4
            R+S  +S  K   N
Sbjct: 640  RQSLAVSKLKSAEN 653


Top