BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00033906
         (728 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   367   2e-99
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   321   2e-85
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   288   1e-75
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   284   2e-74
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   282   7e-74
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   281   1e-73
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   278   1e-72
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              277   3e-72
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   277   3e-72
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   275   9e-72
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   275   9e-72
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   274   2e-71
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   269   8e-70
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   268   1e-69
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...   265   1e-68
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   265   1e-68
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   265   1e-68
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   263   5e-68
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   258   1e-66
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   258   2e-66

>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  367 bits (943), Expect = 2e-99
 Identities = 182/242 (75%), Positives = 201/242 (83%)
 Frame = +3

Query: 3    SLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFK 182
            SLFQ KYPS D  P EEF LV RPLFRGLNPYQEMVH             GLTEPGTLFK
Sbjct: 723  SLFQKKYPSCDGYPAEEFSLVSRPLFRGLNPYQEMVHSIASREVIVRSTRGLTEPGTLFK 782

Query: 183  NLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAY 362
            NLMAILRDVVIC+DGTVRNMCSNSI+QFEYGVNTANIASEFCAGDPVGVLAATAMSNPAY
Sbjct: 783  NLMAILRDVVICHDGTVRNMCSNSIIQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAY 842

Query: 363  KAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKN 542
            KAVLD        W+MMKEILLCGV FKND  DRRV+LYL+ CDCGRKHCQE+AAL VKN
Sbjct: 843  KAVLDSSSSSNSSWEMMKEILLCGVSFKNDITDRRVILYLSHCDCGRKHCQESAALVVKN 902

Query: 543  HLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKCQ 722
             LK++SLK+ A+EFLIEYRSQ VHE+++ + G LVGHIHLNK+QL+QSNI + DVLEKC+
Sbjct: 903  QLKKVSLKDTAMEFLIEYRSQSVHESHETSHG-LVGHIHLNKTQLVQSNISMDDVLEKCR 961

Query: 723  DT 728
            +T
Sbjct: 962  ET 963


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  321 bits (822), Expect = 2e-85
 Identities = 156/242 (64%), Positives = 184/242 (76%)
 Frame = +3

Query: 3    SLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFK 182
            SLF+ KYPS DD P E+FGLV +PLFRGLNPYQEMVH             GLTEPGTLFK
Sbjct: 723  SLFRSKYPSSDDCPTEDFGLVCQPLFRGLNPYQEMVHSISSREVIVRSSRGLTEPGTLFK 782

Query: 183  NLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAY 362
            NLMAILRDVVICYDGTVRNMCSNSI+QFEY  N+ +I +EFCAGDPVGVLAAT+MSNPAY
Sbjct: 783  NLMAILRDVVICYDGTVRNMCSNSIIQFEYSANSTDIVTEFCAGDPVGVLAATSMSNPAY 842

Query: 363  KAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKN 542
            KAVLD        W MMK+ILLC   FKND +DRRV+LYL  C+CGRKHCQET AL V+N
Sbjct: 843  KAVLDSSSSSNSAWQMMKDILLCATSFKNDISDRRVILYLTDCECGRKHCQETGALVVQN 902

Query: 543  HLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKCQ 722
            HLK+++LK+ A++FLIEY  QL     +G  G LVGHIHL++ +L++SN+    + E C 
Sbjct: 903  HLKKVTLKDTAVDFLIEYFHQLCQSLEEGYPG-LVGHIHLSEMELIRSNVNKDRIFEGCL 961

Query: 723  DT 728
            +T
Sbjct: 962  ET 963


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  288 bits (738), Expect = 1e-75
 Identities = 151/242 (62%), Positives = 176/242 (72%), Gaps = 2/242 (0%)
 Frame = +3

Query: 6    LFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKN 185
            LFQ KYPS   +P EEFGLV   LF GL+PYQ M+H             GLTEPGTLFKN
Sbjct: 726  LFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRGLTEPGTLFKN 785

Query: 186  LMAILRDVVICYDGTVRNMCSNSIVQFEYGVNT-ANIASEFCAGDPVGVLAATAMSNPAY 362
            LMAILRDVVICYDGTVRN+ SNSI+QFEYG +  +N+ SEFCAGDPVGVLAATAMSNPAY
Sbjct: 786  LMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVLAATAMSNPAY 845

Query: 363  KAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKN 542
            KAVLD        W+MMKEILLCGV FKND +DRRV+LYLN C C R +C+E AA  VKN
Sbjct: 846  KAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYCREKAAYVVKN 905

Query: 543  HLKRISLKEAAIEFLIEYRS-QLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKC 719
            HL ++ LK+AA EFLIEY   Q  +EN +  +G L+GHI LN+ QL    I + +V E+C
Sbjct: 906  HLSKVCLKDAADEFLIEYAGRQAGYENSETGTG-LIGHIRLNQGQLENLGISVLEVHERC 964

Query: 720  QD 725
            Q+
Sbjct: 965  QE 966


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  284 bits (727), Expect = 2e-74
 Identities = 149/242 (61%), Positives = 174/242 (71%), Gaps = 2/242 (0%)
 Frame = +3

Query: 6   LFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKN 185
           LFQ KYPS   +P EEFGLV   LF GL+PYQ M+H             GLTEPGTLF N
Sbjct: 277 LFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRGLTEPGTLFXN 336

Query: 186 LMAILRDVVICYDGTVRNMCSNSIVQFEYGVNT-ANIASEFCAGDPVGVLAATAMSNPAY 362
           LMAILRDVVICYDGTVRN+ SNSI+QFEYG +  +N+ SEFCAGDPVGVLAATAMSNPAY
Sbjct: 337 LMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVLAATAMSNPAY 396

Query: 363 KAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKN 542
           KA LD        W+MMKEILLCGV FKND +DRRV+LYLN C C R +C+E AA  VKN
Sbjct: 397 KAXLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYCREKAAYVVKN 456

Query: 543 HLKRISLKEAAIEFLIEYRS-QLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKC 719
           HL ++ LK+AA EFLIEY   Q  +EN +  +G L+GHI LN+ QL    I + +V E+C
Sbjct: 457 HLSKVCLKDAADEFLIEYAGRQAGYENSETGTG-LIGHIRLNQGQLENLGISVLEVHERC 515

Query: 720 QD 725
           Q+
Sbjct: 516 QE 517


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  282 bits (722), Expect = 7e-74
 Identities = 145/243 (59%), Positives = 172/243 (70%), Gaps = 1/243 (0%)
 Frame = +3

Query: 3    SLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFK 182
            SL   KYPS  D P  E+GLV    F GL+PY+ +VH             GL+EPGTLFK
Sbjct: 727  SLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLSEPGTLFK 786

Query: 183  NLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGVLAATAMSNPA 359
            NLMAILRDVVICYDGTVRN+CSNSI+QFEYGVN  +     F AG+PVGVLAATAMSNPA
Sbjct: 787  NLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQHLFPAGEPVGVLAATAMSNPA 846

Query: 360  YKAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVK 539
            YKAVLD        W++MKEILLC V FKN+  DRRV+LYLN C CGRK+C+E AA  VK
Sbjct: 847  YKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRERAACLVK 906

Query: 540  NHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKC 719
            N LK++SLK+ A+EF+IEY +QL       N   LVGHIHLN+  L + NI + D+L+KC
Sbjct: 907  NQLKKVSLKDTAVEFMIEYNNQLSGLGSLINDAGLVGHIHLNEDMLRELNIGVHDILQKC 966

Query: 720  QDT 728
            Q+T
Sbjct: 967  QET 969


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  281 bits (720), Expect = 1e-73
 Identities = 145/242 (59%), Positives = 171/242 (70%), Gaps = 1/242 (0%)
 Frame = +3

Query: 3    SLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFK 182
            SLF  KYP  D  P EEFG V R  F GL+PY+E+VH             GL EPGTLFK
Sbjct: 525  SLFHQKYPFADVYPSEEFGFVSRCFFHGLDPYEEIVHSIATREVIVRSSKGLAEPGTLFK 584

Query: 183  NLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAY 362
            NLMA+LRDVVICYDGTVRN+ SNS++QFEYGV      + F AGDPVGVLAATAMSNPAY
Sbjct: 585  NLMAVLRDVVICYDGTVRNISSNSVIQFEYGVGGMQSQNLFPAGDPVGVLAATAMSNPAY 644

Query: 363  KAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKN 542
            KAVLD        WDMMKEIL C   F+ND  DRRV+LYLN C CGRK+CQE A+  VKN
Sbjct: 645  KAVLDSSPNSNSSWDMMKEILFCRANFRNDINDRRVILYLNDCCCGRKYCQENASCLVKN 704

Query: 543  HLKRISLKEAAIEFLIEY-RSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKC 719
            HLK++SL++AAIE  IEY R +L  E+ + ++G LVGHIHLN   L  S I + D+L+KC
Sbjct: 705  HLKKVSLRDAAIELAIEYKRPKLEPESCEIDAG-LVGHIHLNSGLLKASGIGMHDILQKC 763

Query: 720  QD 725
            ++
Sbjct: 764  EE 765


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  278 bits (712), Expect = 1e-72
 Identities = 145/244 (59%), Positives = 174/244 (71%), Gaps = 2/244 (0%)
 Frame = +3

Query: 3    SLFQMKYPS-YDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLF 179
            S F  KYP+   D P  ++GL+    F GL+ Y+EM H             GL+EPGTLF
Sbjct: 730  SHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRSSRGLSEPGTLF 789

Query: 180  KNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIA-SEFCAGDPVGVLAATAMSNP 356
            KNLMAILRDVVICYDGTVRN+ SNSI+QFEYGV     + S F AG+PVGVLAATAMSNP
Sbjct: 790  KNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVKVGTESQSLFPAGEPVGVLAATAMSNP 849

Query: 357  AYKAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAV 536
            AYKAVLD        WDMMKEILLC VGFKND ADRRV+LYLN C CGR +CQE AA  V
Sbjct: 850  AYKAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRNYCQERAAYLV 909

Query: 537  KNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEK 716
            KNHL+++SLK+ A  F+IEY+SQ + E++  ++G LVGH+HL+K +L   NI    +LEK
Sbjct: 910  KNHLEKVSLKDIAKCFMIEYKSQQIPESFGSDAG-LVGHVHLDKRKLQDLNITAQVILEK 968

Query: 717  CQDT 728
            CQ+T
Sbjct: 969  CQET 972


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  277 bits (708), Expect = 3e-72
 Identities = 143/243 (58%), Positives = 167/243 (68%), Gaps = 2/243 (0%)
 Frame = +3

Query: 6    LFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFK 182
            LF+ KYP +  D P  EFGL+    F GL+PY+EMVH             GL+EPGTLFK
Sbjct: 785  LFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFK 844

Query: 183  NLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFC-AGDPVGVLAATAMSNPA 359
            NLMAILRDVVICYDGTVRN+CSNSI+QFEYGV        F  AG+PVGVLAATAMSNPA
Sbjct: 845  NLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPA 904

Query: 360  YKAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVK 539
            YKAVLD        W++MKEILLC V FKND  DRRV+LYLN CDCGRK+C+E AA  VK
Sbjct: 905  YKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVK 964

Query: 540  NHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKC 719
            N LK+ SLK+ A+EF+IEY  Q            LVGHIHLNK  L   N+ + +V +KC
Sbjct: 965  NQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKC 1024

Query: 720  QDT 728
            ++T
Sbjct: 1025 EET 1027


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  277 bits (708), Expect = 3e-72
 Identities = 143/243 (58%), Positives = 167/243 (68%), Gaps = 2/243 (0%)
 Frame = +3

Query: 6    LFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFK 182
            LF+ KYP +  D P  EFGL+    F GL+PY+EMVH             GL+EPGTLFK
Sbjct: 725  LFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFK 784

Query: 183  NLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFC-AGDPVGVLAATAMSNPA 359
            NLMAILRDVVICYDGTVRN+CSNSI+QFEYGV        F  AG+PVGVLAATAMSNPA
Sbjct: 785  NLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPA 844

Query: 360  YKAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVK 539
            YKAVLD        W++MKEILLC V FKND  DRRV+LYLN CDCGRK+C+E AA  VK
Sbjct: 845  YKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVK 904

Query: 540  NHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKC 719
            N LK+ SLK+ A+EF+IEY  Q            LVGHIHLNK  L   N+ + +V +KC
Sbjct: 905  NQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKC 964

Query: 720  QDT 728
            ++T
Sbjct: 965  EET 967


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  275 bits (704), Expect = 9e-72
 Identities = 141/242 (58%), Positives = 168/242 (69%)
 Frame = +3

Query: 3    SLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFK 182
            S F+  YP   + P  ++GL+    F GL+PY+EM H             GL+EPGTLFK
Sbjct: 725  SHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTLFK 784

Query: 183  NLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAY 362
            NLMA+LRDVVICYDGTVRN+CSNSI+QF+Y VN     S F AG+PVGVLAATAMSNPAY
Sbjct: 785  NLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATAMSNPAY 844

Query: 363  KAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKN 542
            KAVLD        W++MKEILLC V F ND  DRRV+LYLN C CGRK+CQE AA  VKN
Sbjct: 845  KAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERAAYMVKN 904

Query: 543  HLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKCQ 722
             LKR+SLK+AA+EFLIEY+   +  + +G    LVGHIHLNK  L    I + D+L KCQ
Sbjct: 905  QLKRVSLKDAAVEFLIEYKKPEIISDDEG----LVGHIHLNKILLEDLRISMHDILPKCQ 960

Query: 723  DT 728
            +T
Sbjct: 961  ET 962


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  275 bits (704), Expect = 9e-72
 Identities = 141/242 (58%), Positives = 168/242 (69%)
 Frame = +3

Query: 3    SLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFK 182
            S F+  YP   + P  ++GL+    F GL+PY+EM H             GL+EPGTLFK
Sbjct: 726  SHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTLFK 785

Query: 183  NLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAY 362
            NLMA+LRDVVICYDGTVRN+CSNSI+QF+Y VN     S F AG+PVGVLAATAMSNPAY
Sbjct: 786  NLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATAMSNPAY 845

Query: 363  KAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKN 542
            KAVLD        W++MKEILLC V F ND  DRRV+LYLN C CGRK+CQE AA  VKN
Sbjct: 846  KAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERAAYMVKN 905

Query: 543  HLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKCQ 722
             LKR+SLK+AA+EFLIEY+   +  + +G    LVGHIHLNK  L    I + D+L KCQ
Sbjct: 906  QLKRVSLKDAAVEFLIEYKKPEIISDDEG----LVGHIHLNKILLEDLRISMHDILPKCQ 961

Query: 723  DT 728
            +T
Sbjct: 962  ET 963


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  274 bits (701), Expect = 2e-71
 Identities = 141/244 (57%), Positives = 176/244 (72%), Gaps = 2/244 (0%)
 Frame = +3

Query: 3    SLFQMKYPS-YDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLF 179
            SL+Q KYPS   D P  EFGLV R    GL+P + M+H             GL+EPGTLF
Sbjct: 723  SLYQNKYPSDIVDYPSAEFGLVHRGFVHGLDPVEGMIHSIATREVIVRSSRGLSEPGTLF 782

Query: 180  KNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGVLAATAMSNP 356
            KNLMA LRDVVICYDGTVRN+CSNSI+QFEYGV + +     F AG+PVGVLAATAMSNP
Sbjct: 783  KNLMATLRDVVICYDGTVRNVCSNSIIQFEYGVKSGSGPENLFPAGEPVGVLAATAMSNP 842

Query: 357  AYKAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAV 536
            AYKAVLD        WD+MKEILLC V FKN+  DRRV+LYLN C CGRK+C+E AA  V
Sbjct: 843  AYKAVLDSTPSSNSSWDLMKEILLCKVNFKNELIDRRVVLYLNDCGCGRKYCREHAAYLV 902

Query: 537  KNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEK 716
            KN LK++SLK+ A+EF+IEY+ +    + + +SG LVGH+HLN+  L + N+ +S++L+K
Sbjct: 903  KNRLKKVSLKDTAVEFMIEYQKERAAGSMEIDSG-LVGHVHLNEMLLRELNLGMSEILQK 961

Query: 717  CQDT 728
            C++T
Sbjct: 962  CEET 965


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  269 bits (687), Expect = 8e-70
 Identities = 142/245 (57%), Positives = 169/245 (68%), Gaps = 3/245 (1%)
 Frame = +3

Query: 3    SLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLF 179
            SLF  +Y S   D P  EFGLV    F GL+PY+EMVH             GLTEPGTLF
Sbjct: 724  SLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLF 783

Query: 180  KNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIA--SEFCAGDPVGVLAATAMSN 353
            KNLMAILRDVVICYDGTVRN+CSNSI+Q EYG+    +   S F  G+PVGVLAATAMS 
Sbjct: 784  KNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMST 843

Query: 354  PAYKAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALA 533
            PAYKAVLD        WDMMKEILLC V FKN+  DRRV+LYLN C CGRK+C E AA  
Sbjct: 844  PAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYV 903

Query: 534  VKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLE 713
            VK+HLK+++LK+AA++F+IEY  Q       G    LVGH+HLN+  L + NI +++VL 
Sbjct: 904  VKSHLKKVTLKDAAMDFMIEYNRQ---PTPSGLGPGLVGHVHLNRMLLKELNIDMTEVLR 960

Query: 714  KCQDT 728
            +CQ+T
Sbjct: 961  RCQET 965


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  268 bits (685), Expect = 1e-69
 Identities = 135/240 (56%), Positives = 172/240 (71%)
 Frame = +3

Query: 6    LFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKN 185
            L+  KYP   D P  E GL+    F GL+PY+E+VH             GLTEPGTLFKN
Sbjct: 729  LYTRKYPENVDYPSAEHGLIRSCFFHGLDPYEEIVHSISTREVIVRSSRGLTEPGTLFKN 788

Query: 186  LMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYK 365
            LMAILRDVVICYDGTVRN+CSNSI+QFEYG  +A   + + AG+PVGVLAATAMSNPAYK
Sbjct: 789  LMAILRDVVICYDGTVRNVCSNSIIQFEYGRGSAR--NLYPAGEPVGVLAATAMSNPAYK 846

Query: 366  AVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKNH 545
            AVLD        W++MKEILLC   F+N+  DRRV+LYLN C CGRK+C+E A   V+N 
Sbjct: 847  AVLDSSPSSNSSWELMKEILLCKAIFRNELIDRRVILYLNHCGCGRKYCREQATYLVQNQ 906

Query: 546  LKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKCQD 725
            LK++SLK+ A+EF+IEY++Q      D N+G LVGHIHLN+  L + +I ++++L+KC++
Sbjct: 907  LKKVSLKDTAVEFMIEYKNQSSFSAVDMNAG-LVGHIHLNEVLLKEMDIGMNEILQKCEE 965


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score =  265 bits (677), Expect = 1e-68
 Identities = 141/242 (58%), Positives = 168/242 (69%), Gaps = 2/242 (0%)
 Frame = +3

Query: 9    FQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKN 185
            FQ  YPS   D P  EFGL+    F GL+PY+ MVH             GL+EPGTLFKN
Sbjct: 727  FQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTLFKN 786

Query: 186  LMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYK 365
            LMAILRDVVICYDGTVRN+ SNSI+QF+YG+N A    +F AG+PVGVLAATAMSNPAYK
Sbjct: 787  LMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVLAATAMSNPAYK 845

Query: 366  AVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKNH 545
            AVLD        W++MKEILLC V  KND  DRRV+LYL  CDCGRK+CQE AA  VKNH
Sbjct: 846  AVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQENAAYLVKNH 905

Query: 546  LKRISLKEAAIEFLIEYR-SQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKCQ 722
            L+++ LK+ A+E + EY+  Q V E+  G    LVGHI LNK+ L + NI + +V  KCQ
Sbjct: 906  LRKVKLKDTAVELIFEYKQQQTVSESEAG----LVGHILLNKAVLKELNISMQEVHMKCQ 961

Query: 723  DT 728
            +T
Sbjct: 962  ET 963


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  265 bits (677), Expect = 1e-68
 Identities = 141/242 (58%), Positives = 168/242 (69%), Gaps = 2/242 (0%)
 Frame = +3

Query: 9    FQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKN 185
            FQ  YPS   D P  EFGL+    F GL+PY+ MVH             GL+EPGTLFKN
Sbjct: 727  FQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTLFKN 786

Query: 186  LMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYK 365
            LMAILRDVVICYDGTVRN+ SNSI+QF+YG+N A    +F AG+PVGVLAATAMSNPAYK
Sbjct: 787  LMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVLAATAMSNPAYK 845

Query: 366  AVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKNH 545
            AVLD        W++MKEILLC V  KND  DRRV+LYL  CDCGRK+CQE AA  VKNH
Sbjct: 846  AVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQENAAYLVKNH 905

Query: 546  LKRISLKEAAIEFLIEYR-SQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKCQ 722
            L+++ LK+ A+E + EY+  Q V E+  G    LVGHI LNK+ L + NI + +V  KCQ
Sbjct: 906  LRKVKLKDTAVELIFEYKQQQTVSESEAG----LVGHILLNKAVLKELNISMQEVHMKCQ 961

Query: 723  DT 728
            +T
Sbjct: 962  ET 963


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  265 bits (677), Expect = 1e-68
 Identities = 141/247 (57%), Positives = 171/247 (69%), Gaps = 5/247 (2%)
 Frame = +3

Query: 3    SLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLF 179
            SLF  +Y S   D P  EFGLV    F GL+PY+EMVH             GLTEPGTLF
Sbjct: 754  SLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLF 813

Query: 180  KNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIA--SEFCAGDPVGVLAATAMSN 353
            KNLMAILRDVVICYDGTVRN+CSNSI+Q EYG+    +   S F  G+PVGVLAATAMS 
Sbjct: 814  KNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMST 873

Query: 354  PAYKAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALA 533
            PAYKAVLD        WDMMKEILLC V FKN+  DRRV+LYLN C CGRK+C E AA  
Sbjct: 874  PAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYV 933

Query: 534  VKNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLM--QSNIILSDV 707
            VK+HLK+++LK+AA++F+IEY  Q       G    LVGH+HLN+ +++  + NI +++V
Sbjct: 934  VKSHLKKVTLKDAAMDFMIEYNRQ---PTPSGLGPGLVGHVHLNRVRMLLKELNIDMTEV 990

Query: 708  LEKCQDT 728
            L +CQ+T
Sbjct: 991  LRRCQET 997


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  263 bits (672), Expect = 5e-68
 Identities = 131/232 (56%), Positives = 168/232 (72%), Gaps = 1/232 (0%)
 Frame = +3

Query: 33   DDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVV 212
            D  P  EFGL+    F GL+PY+E+VH             GL+EPGTLFKNLMAILRDVV
Sbjct: 739  DGYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIVRSSRGLSEPGTLFKNLMAILRDVV 798

Query: 213  ICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGVLAATAMSNPAYKAVLDXXXX 389
            ICYDGTVRN+CSNSI+QFEYG+ + + +   F AG+PVGVLAAT+MSNPAYKAVLD    
Sbjct: 799  ICYDGTVRNVCSNSIIQFEYGIQSGDKSQPLFPAGEPVGVLAATSMSNPAYKAVLDASPS 858

Query: 390  XXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKNHLKRISLKE 569
                W+ MKEILLC V F+N+  DRRV+LYLN CDCGR +C+E AA  VKN L+++SLK+
Sbjct: 859  SNSSWEFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRSYCRENAAYLVKNQLRKVSLKD 918

Query: 570  AAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKCQD 725
            AA++F +EY+ Q    +   ++G LVGHIHLN++ L +  I +S+V +KCQ+
Sbjct: 919  AALDFTVEYQQQRRRNDGSEDAG-LVGHIHLNEAMLEKLKINMSEVYQKCQE 969


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  258 bits (660), Expect = 1e-66
 Identities = 129/230 (56%), Positives = 160/230 (69%), Gaps = 1/230 (0%)
 Frame = +3

Query: 33   DDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVV 212
            D  P  E+GL+    F GL+PY+EMVH             GL+EPGTLFKNLMAILRDVV
Sbjct: 739  DGYPSAEYGLLKGCFFNGLDPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVV 798

Query: 213  ICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGVLAATAMSNPAYKAVLDXXXX 389
            ICYDGTVRN+CSNSI+QFEYG+   +     F AG+PVGVLAATAMSNPAYKAVLD    
Sbjct: 799  ICYDGTVRNICSNSIIQFEYGIQAGDKTEHLFPAGEPVGVLAATAMSNPAYKAVLDASPN 858

Query: 390  XXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAVKNHLKRISLKE 569
                W++MKEILLC V F+N+  DRRV+LYLN CDCG   C+E AA +VKN L+++SLK 
Sbjct: 859  SNSSWELMKEILLCKVNFRNEPVDRRVILYLNDCDCGGSCCRENAAYSVKNQLRKVSLKN 918

Query: 570  AAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEKC 719
            AA+EF+IEY+ Q   +        LVGHI+L++  L +  I +++V EKC
Sbjct: 919  AAVEFIIEYQQQRTQKENSETDAGLVGHIYLDEMMLEELKISMANVFEKC 968


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  258 bits (658), Expect = 2e-66
 Identities = 132/243 (54%), Positives = 172/243 (70%), Gaps = 2/243 (0%)
 Frame = +3

Query: 3    SLFQMK-YPSYDDSPYEEFGLVGRPLFRGLNPYQEMVHXXXXXXXXXXXXXGLTEPGTLF 179
            S FQ+K +   DD P  EFGL+    F GL+PY+E+VH             GL+EPGTLF
Sbjct: 810  SHFQLKCFYDKDDYPSAEFGLLKGCFFHGLDPYEELVHSIATREIIDRSSRGLSEPGTLF 869

Query: 180  KNLMAILRDVVICYDGTVRNMCSNSIVQFEYGVNTANIASE-FCAGDPVGVLAATAMSNP 356
            KNLMAILRDVVICYDGTVRN+CSNSI+QFEYG+ + + A   F AG+PVGVLAAT+MSNP
Sbjct: 870  KNLMAILRDVVICYDGTVRNVCSNSIIQFEYGIQSGDAAQHLFPAGEPVGVLAATSMSNP 929

Query: 357  AYKAVLDXXXXXXXXWDMMKEILLCGVGFKNDTADRRVLLYLNGCDCGRKHCQETAALAV 536
            AYKAVLD        W  MKEILLC V F+N+  DRRV+LYLN CDCGR +C+E AA  V
Sbjct: 930  AYKAVLDASPSSNSSWGFMKEILLCKVNFRNEPNDRRVILYLNDCDCGRNYCRENAAYLV 989

Query: 537  KNHLKRISLKEAAIEFLIEYRSQLVHENYDGNSGLLVGHIHLNKSQLMQSNIILSDVLEK 716
            +N L+++SLK+AA++F++EY+ Q    +   ++G LV HI L + +L +  I +++V +K
Sbjct: 990  QNQLRKVSLKDAALDFIVEYQQQRRRRDGTEDAG-LVCHIRLKEVKLEELKINMTEVYQK 1048

Query: 717  CQD 725
            CQ+
Sbjct: 1049 CQE 1051