BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00033502
         (629 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU41210.1| hypothetical protein MIMGU_mgv1a020437mg [Mimulus...   362   5e-98
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   325   5e-87
ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containi...   315   5e-84
ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citr...   314   1e-83
ref|XP_007216125.1| hypothetical protein PRUPE_ppa018932mg [Prun...   310   2e-82
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...   310   2e-82
ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily p...   309   5e-82
gb|EPS72239.1| hypothetical protein M569_02517, partial [Genlise...   304   1e-80
ref|XP_007216398.1| hypothetical protein PRUPE_ppa022530mg [Prun...   303   2e-80
ref|XP_002893429.1| pentatricopeptide repeat-containing protein ...   302   5e-80
ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containi...   301   8e-80
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   301   1e-79
ref|XP_006306802.1| hypothetical protein CARUB_v10008344mg [Caps...   300   2e-79
ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containi...   300   3e-79
ref|NP_173907.1| pentatricopeptide repeat-containing protein [Ar...   298   7e-79
ref|XP_002302000.2| pentatricopeptide repeat-containing family p...   298   9e-79
ref|XP_007144135.1| hypothetical protein PHAVU_007G131600g [Phas...   297   2e-78
ref|XP_004495263.1| PREDICTED: pentatricopeptide repeat-containi...   297   2e-78
ref|XP_003535453.2| PREDICTED: pentatricopeptide repeat-containi...   296   4e-78
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   295   6e-78

>gb|EYU41210.1| hypothetical protein MIMGU_mgv1a020437mg [Mimulus guttatus]
          Length = 680

 Score =  362 bits (929), Expect = 5e-98
 Identities = 175/209 (83%), Positives = 195/209 (93%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKCG++ QAR+IFD+   KDL+SWNA+LSAYVS GKI EAK+IF+EM EKN+LSWTVMIS
Sbjct: 222 WKCGELEQARSIFDSISIKDLISWNAILSAYVSKGKIHEAKSIFDEMSEKNMLSWTVMIS 281

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQHGSGEEALKLF++MKSNGLEPCDYAFSGAITSCAVLA+LEQGRQLHGQLIR+GFDS
Sbjct: 282 GLAQHGSGEEALKLFSKMKSNGLEPCDYAFSGAITSCAVLASLEQGRQLHGQLIRLGFDS 341

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY RCG LDAAYS+FLTMP LD VSWNAMIAA GQHGHG +A++LYEEML
Sbjct: 342 SLSAGNALITMYARCGVLDAAYSVFLTMPCLDSVSWNAMIAALGQHGHGNQALQLYEEML 401

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           EE ILPDRITFLTVLSACSHAGLV++GK+
Sbjct: 402 EERILPDRITFLTVLSACSHAGLVEQGKQ 430



 Score =  123 bits (308), Expect = 5e-26
 Identities = 65/205 (31%), Positives = 116/205 (56%), Gaps = 4/205 (1%)
 Frame = +3

Query: 27  ARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSG 206
           AR +FD    KD +SW  +++ YV    +D AK +F+ M EK +++W  MISG  Q G  
Sbjct: 94  ARKLFDVMPEKDELSWTTIITGYVKNEDLDSAKEVFDGMDEKLVVAWNAMISGYVQKGLV 153

Query: 207 EEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRV----GFDSSLSA 374
            +  ++F  M S G++  D+ ++  +++CA       G+Q+H  ++R      +   +S 
Sbjct: 154 FKVFEMFRSMHSLGIKHDDFTYTNVLSACADAGLFLHGKQVHAYILRTEAKPAWAFMVSV 213

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHI 554
            NALIT+Y +CG L+ A S+F ++   D +SWNA+++A+   G   EA  +++EM E+++
Sbjct: 214 NNALITLYWKCGELEQARSIFDSISIKDLISWNAILSAYVSKGKIHEAKSIFDEMSEKNM 273

Query: 555 LPDRITFLTVLSACSHAGLVDEGKK 629
           L    ++  ++S  +  G  +E  K
Sbjct: 274 L----SWTVMISGLAQHGSGEEALK 294


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  325 bits (834), Expect = 5e-87
 Identities = 153/209 (73%), Positives = 183/209 (87%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKCGK+++AR +F+    KDLVSWNA+LS YV+AG+IDEAK+ F EM E+N+L+WTVMIS
Sbjct: 341 WKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMIS 400

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GEE+LKLFNRMKS G EPCDYAF+GAI +CA LAAL  GRQLH QL+R+GFDS
Sbjct: 401 GLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDS 460

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY +CG ++AA+ +FLTMPYLD VSWNAMIAA GQHGHGA+A++L+E ML
Sbjct: 461 SLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELML 520

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           +E ILPDRITFLTVLS CSHAGLV+EG +
Sbjct: 521 KEDILPDRITFLTVLSTCSHAGLVEEGHR 549



 Score =  133 bits (334), Expect = 5e-29
 Identities = 70/205 (34%), Positives = 114/205 (55%), Gaps = 4/205 (1%)
 Frame = +3

Query: 27  ARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSG 206
           AR +FD    +D +SW  M++ YV  G++D A+   + M EK +++W  MISG   HG  
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272

Query: 207 EEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRV----GFDSSLSA 374
            EAL++F +M   G++  ++ ++  +++CA       G+Q+H  ++R       D SLS 
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHI 554
            NAL T+Y +CG +D A  +F  MP  D VSWNA+++ +   G   EA   +EEM E ++
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL 392

Query: 555 LPDRITFLTVLSACSHAGLVDEGKK 629
           L    T+  ++S  +  G  +E  K
Sbjct: 393 L----TWTVMISGLAQNGFGEESLK 413



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 43/251 (17%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIF--NEMREKNILSWTVMI 179
           K   +  A ++FD     D+V+   +++A+ SAG  + A+ IF    +  ++ + +  MI
Sbjct: 62  KSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMI 121

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVGF 356
           +G + +  G  A++LF  +  NG  P ++ F+  + + A++   E Q +Q+H  +++ G 
Sbjct: 122 TGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGS 181

Query: 357 DSSLSAGNALITMYGRC----------------------------------------GAL 416
               S  NAL++++ +C                                        G L
Sbjct: 182 GFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGEL 241

Query: 417 DAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSAC 596
           DAA      M     V+WNAMI+ +  HG   EA++++ +M    I  D  T+ +VLSAC
Sbjct: 242 DAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSAC 301

Query: 597 SHAGLVDEGKK 629
           ++AG    GK+
Sbjct: 302 ANAGFFLHGKQ 312


>ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like isoform X1 [Citrus sinensis]
           gi|568839239|ref|XP_006473596.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like isoform X2 [Citrus sinensis]
          Length = 799

 Score =  315 bits (808), Expect = 5e-84
 Identities = 151/209 (72%), Positives = 181/209 (86%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKCGK+N+AR+IF+    +DLVSWNA+LSAYVSAG IDEAK++F  MRE+N+L+WTVMIS
Sbjct: 341 WKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFGTMRERNLLTWTVMIS 400

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GEE LKLF++M+  G EPCDYAF+GAITSCA L ALE GRQLH QL+  G+DS
Sbjct: 401 GLAQNGYGEEGLKLFSQMRLEGFEPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDS 460

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY RCG ++AA  +F TMP +D VSWNAMIAA GQHG+GA+AI+LYE+ML
Sbjct: 461 SLSAGNALITMYARCGVVEAANRVFHTMPNVDSVSWNAMIAALGQHGNGAQAIELYEQML 520

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           +E ILPDRITFLTVLSAC+HAGLV EG++
Sbjct: 521 KEGILPDRITFLTVLSACNHAGLVKEGRR 549



 Score =  112 bits (281), Expect = 7e-23
 Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 4/205 (1%)
 Frame = +3

Query: 27  ARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSG 206
           AR +FD    +D +SW  M++ YV    +D A+   + M E   ++W  +ISG       
Sbjct: 213 ARRVFDEMPERDELSWTTMMTGYVKNDDLDAAREFLDGMSENVGVAWNALISGYVHRELY 272

Query: 207 EEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGF----DSSLSA 374
           +EAL++F +M    ++  ++ ++  I++CA       G+Q+H  L+R       + SL  
Sbjct: 273 QEALEMFRKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPV 332

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHI 554
            NAL+T+Y +CG ++ A  +F  MP  D VSWNA+++A+   G   EA  L+  M E ++
Sbjct: 333 NNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFGTMRERNL 392

Query: 555 LPDRITFLTVLSACSHAGLVDEGKK 629
           L    T+  ++S  +  G  +EG K
Sbjct: 393 L----TWTVMISGLAQNGYGEEGLK 413



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 61/248 (24%), Positives = 123/248 (49%), Gaps = 43/248 (17%)
 Frame = +3

Query: 15  KINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMISGL 188
           K+  AR +FD     D+V+   +++AY ++G +  A+ +FN+  ++ ++ + +  MI+  
Sbjct: 65  KLVYARTLFDEIPQPDIVARTTLIAAYSASGNVKLAREMFNKTPLKMRDTVFYNAMITAY 124

Query: 189 AQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVGFDSS 365
           + +  G  A++LF  M+ + ++P ++ F+  +++ A++   E Q  Q+H  +++ G    
Sbjct: 125 SHNSDGHAAIELFRDMRRDNVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLF 184

Query: 366 LSAGNALITMYGRC---------GALDAAYSMFLTMPYLDP------------------- 461
            S  NALI++Y +C          ++ AA  +F  MP  D                    
Sbjct: 185 TSVLNALISVYVKCVSSPFVSSRSSMGAARRVFDEMPERDELSWTTMMTGYVKNDDLDAA 244

Query: 462 ------------VSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHA 605
                       V+WNA+I+ +       EA++++ +ML   I  D  T+ +V+SAC+++
Sbjct: 245 REFLDGMSENVGVAWNALISGYVHRELYQEALEMFRKMLMLRIQLDEFTYTSVISACANS 304

Query: 606 GLVDEGKK 629
           GL   GK+
Sbjct: 305 GLFRLGKQ 312


>ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citrus clementina]
           gi|557537225|gb|ESR48343.1| hypothetical protein
           CICLE_v10000322mg [Citrus clementina]
          Length = 799

 Score =  314 bits (805), Expect = 1e-83
 Identities = 151/209 (72%), Positives = 180/209 (86%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKCGK+N+AR+IF+    +DLVSWNA+LSAYVSAG IDEAK++F  MRE+N+LSWTVMIS
Sbjct: 341 WKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMIS 400

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GEE LKLF++M+  G +PCDYAF+GAITSCA L ALE GRQLH QL+  G+DS
Sbjct: 401 GLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDS 460

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY RCG ++AA  +F TMP +D VSWNAMIAA GQHG+GA AI+LYE+ML
Sbjct: 461 SLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQML 520

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           +E ILPDRITFLTVLSAC+HAGLV EG++
Sbjct: 521 KEGILPDRITFLTVLSACNHAGLVKEGRR 549



 Score =  115 bits (289), Expect = 8e-24
 Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 4/205 (1%)
 Frame = +3

Query: 27  ARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSG 206
           AR +FD    +D +SW  M++ YV    +D A+   + M E   ++W  +ISG       
Sbjct: 213 ARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELY 272

Query: 207 EEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGF----DSSLSA 374
           +EAL++F +M   G++  ++ ++  I++CA       G+Q+H  L+R       + SL  
Sbjct: 273 QEALEMFRKMLMLGIQLDEFTYTTVISACANSGLFRLGKQVHAYLLRTEAKRTPEFSLPV 332

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHI 554
            NAL+T+Y +CG ++ A  +F  MP  D VSWNA+++A+   G   EA  L+E M E ++
Sbjct: 333 NNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNL 392

Query: 555 LPDRITFLTVLSACSHAGLVDEGKK 629
           L    ++  ++S  +  G  +EG K
Sbjct: 393 L----SWTVMISGLAQNGYGEEGLK 413



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 64/252 (25%), Positives = 126/252 (50%), Gaps = 45/252 (17%)
 Frame = +3

Query: 9   CGKIN--QARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVM 176
           C  +N   AR +FD     D+V+   +++AY ++  +  A+ +FN+  +++++ + +  M
Sbjct: 61  CKSLNLVYARKLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKKRDTVFYNAM 120

Query: 177 ISGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVG 353
           I+  + + +G  A++LF  M+ + ++P ++ F+  +++ A++   E Q  Q+H  +++ G
Sbjct: 121 ITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSG 180

Query: 354 FDSSLSAGNALITMYGRC---------GALDAAYSMFLTMP------------------Y 452
                S  NALI++Y +C           + AA  +F  MP                  Y
Sbjct: 181 TGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDY 240

Query: 453 LDP-------------VSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSA 593
           LD              V+WNA+I+ +       EA++++ +ML   I  D  T+ TV+SA
Sbjct: 241 LDAAREFLDGMSENVGVAWNALISGYVHRELYQEALEMFRKMLMLGIQLDEFTYTTVISA 300

Query: 594 CSHAGLVDEGKK 629
           C+++GL   GK+
Sbjct: 301 CANSGLFRLGKQ 312


>ref|XP_007216125.1| hypothetical protein PRUPE_ppa018932mg [Prunus persica]
           gi|462412275|gb|EMJ17324.1| hypothetical protein
           PRUPE_ppa018932mg [Prunus persica]
          Length = 689

 Score =  310 bits (794), Expect = 2e-82
 Identities = 150/208 (72%), Positives = 175/208 (84%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           +KCGK+++AR IF+    KDLVSWNA+LS YVSAG+I EAK+ F EM E++IL+WTVMIS
Sbjct: 231 YKCGKLDEARYIFNNMPVKDLVSWNAILSGYVSAGRIQEAKSFFKEMPERSILTWTVMIS 290

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GEEA+KLFN+M+S G EPCDYAFSGAITSCA L ALE GRQLH QLI +GFDS
Sbjct: 291 GLAQNGLGEEAMKLFNQMRSEGFEPCDYAFSGAITSCAALGALEHGRQLHAQLISLGFDS 350

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSA NALITMY RCG  + A S+FLTMPY+D VSWNAMIAA  QHGHG +AI L+E+ML
Sbjct: 351 SLSAANALITMYARCGVFEDANSVFLTMPYIDSVSWNAMIAALAQHGHGVQAIDLFEKML 410

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGK 626
           +  ILPDRITFL +LSACSHAGLV EG+
Sbjct: 411 KADILPDRITFLIILSACSHAGLVKEGR 438



 Score =  129 bits (324), Expect = 7e-28
 Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
 Frame = +3

Query: 18  INQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQH 197
           + +ARN+F+    +D +SW  M++ Y+    +  A+ + + M E+  + W  MISG A H
Sbjct: 100 MGEARNLFNEMPERDELSWTTMITGYIRNEDLHAARELLDGMDERMEVVWNAMISGYAHH 159

Query: 198 GSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRV----GFDSS 365
            S +EAL LF +M+  G+   ++ ++  I++CA     + G+Q+H  ++R       D S
Sbjct: 160 NSFQEALLLFRKMRLLGIHQDEFTYTSVISTCANNGLFQLGKQVHAYILRTEAKPTVDFS 219

Query: 366 LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLE 545
           LS  N L+T+Y +CG LD A  +F  MP  D VSWNA+++ +   G   EA   ++EM E
Sbjct: 220 LSVNNTLLTLYYKCGKLDEARYIFNNMPVKDLVSWNAILSGYVSAGRIQEAKSFFKEMPE 279

Query: 546 EHILPDRITFLTVLSACSHAGLVDEGKK 629
             IL    T+  ++S  +  GL +E  K
Sbjct: 280 RSIL----TWTVMISGLAQNGLGEEAMK 303



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 41/201 (20%)
 Frame = +3

Query: 150 KNILSWTVMISGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQ 326
           ++ + +  MI+G +++  G  +++LF  M+  G  P D+ ++  ++  A +  +E Q +Q
Sbjct: 2   RDTVCYNAMITGYSRNNDGYASIRLFCEMRQGGFRPDDFTYTTVLSGAAQIVDVEKQCQQ 61

Query: 327 LHGQLIRVGFDSSLSAGNALITMYGRCGA---------LDAAYSMFLTMPYLDPVS---- 467
           LH  +++ G   + S  NAL+++Y RC +         +  A ++F  MP  D +S    
Sbjct: 62  LHCAVVKSGTGFATSVWNALLSVYVRCASSPLVSSSSLMGEARNLFNEMPERDELSWTTM 121

Query: 468 ---------------------------WNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDR 566
                                      WNAMI+ +  H    EA+ L+ +M    I  D 
Sbjct: 122 ITGYIRNEDLHAARELLDGMDERMEVVWNAMISGYAHHNSFQEALLLFRKMRLLGIHQDE 181

Query: 567 ITFLTVLSACSHAGLVDEGKK 629
            T+ +V+S C++ GL   GK+
Sbjct: 182 FTYTSVISTCANNGLFQLGKQ 202


>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score =  310 bits (794), Expect = 2e-82
 Identities = 147/209 (70%), Positives = 176/209 (84%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKCGK+++A+ +F+    +DLVSWN +LS Y++AG++DEAK  F EM EKNILSW VMIS
Sbjct: 343 WKCGKVDEAQEVFNNMPVRDLVSWNTILSGYLNAGRMDEAKTFFEEMPEKNILSWVVMIS 402

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GEE LKLFN+MK  G EPCDYAF+GAITSC++L  LE GRQLH QL+R GFDS
Sbjct: 403 GLAQNGFGEEGLKLFNQMKLRGFEPCDYAFAGAITSCSMLGLLEHGRQLHAQLVRFGFDS 462

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY RCG ++AA ++FL+MP +D VSWNAMIAA GQHG+G +AI+L+EEML
Sbjct: 463 SLSAGNALITMYARCGVVEAARTLFLSMPCVDSVSWNAMIAALGQHGYGVQAIELFEEML 522

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
            E ILPDRITFLTVLSACSHAGLV EG +
Sbjct: 523 IEGILPDRITFLTVLSACSHAGLVKEGHR 551



 Score =  134 bits (338), Expect = 2e-29
 Identities = 70/205 (34%), Positives = 118/205 (57%), Gaps = 4/205 (1%)
 Frame = +3

Query: 27  ARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSG 206
           AR +FD    +D +SW  +++ YV    +D A+ +F+ MREK ++ W  MISG    G  
Sbjct: 215 ARRLFDEMPVRDELSWTTIITGYVKNDDLDAAREVFDGMREKLVVVWNAMISGYMHRGLY 274

Query: 207 EEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRV----GFDSSLSA 374
           +EAL++F +M   GL+  ++ ++  I++CA    L+ G+Q+H  +++       D SL  
Sbjct: 275 QEALEMFRKMYLAGLKLDEFTYTSIISACANAGFLQHGKQVHAYILKTEAMPSPDFSLPV 334

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHI 554
            NAL+T+Y +CG +D A  +F  MP  D VSWN +++ +   G   EA   +EEM E++I
Sbjct: 335 NNALVTLYWKCGKVDEAQEVFNNMPVRDLVSWNTILSGYLNAGRMDEAKTFFEEMPEKNI 394

Query: 555 LPDRITFLTVLSACSHAGLVDEGKK 629
           L    +++ ++S  +  G  +EG K
Sbjct: 395 L----SWVVMISGLAQNGFGEEGLK 415



 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 43/251 (17%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMI 179
           K  K++ AR++FD     D+V+   +++AY + G +  AK +F E  +  ++ + +  MI
Sbjct: 64  KSSKLSYARSLFDEIPQPDIVARTTLINAYSATGHLKLAKEMFYETPLIMRDAVIYNAMI 123

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQG-RQLHGQLIRVGF 356
           +  + +  G  A++LF  MK N   P ++ F+  + + A++A  E+  +QLH  +++ G 
Sbjct: 124 TAYSHNNDGHAAIELFCDMKRNDFRPDNFTFTSVLGALALVAENERHCQQLHCTVVKSGT 183

Query: 357 DSSLSAGNALITMYGRCGA---------LDAAYSMFLTMPYLDPVS-------------- 467
               S  NALI++Y +C +         + AA  +F  MP  D +S              
Sbjct: 184 WFVTSVLNALISVYVKCASSPSVISSSLMGAARRLFDEMPVRDELSWTTIITGYVKNDDL 243

Query: 468 -----------------WNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSAC 596
                            WNAMI+ +   G   EA++++ +M    +  D  T+ +++SAC
Sbjct: 244 DAAREVFDGMREKLVVVWNAMISGYMHRGLYQEALEMFRKMYLAGLKLDEFTYTSIISAC 303

Query: 597 SHAGLVDEGKK 629
           ++AG +  GK+
Sbjct: 304 ANAGFLQHGKQ 314



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 28/96 (29%), Positives = 52/96 (54%)
 Frame = +3

Query: 63  LVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSGEEALKLFNRMKS 242
           L + NA+++ Y   G ++ A+ +F  M   + +SW  MI+ L QHG G +A++LF  M  
Sbjct: 464 LSAGNALITMYARCGVVEAARTLFLSMPCVDSVSWNAMIAALGQHGYGVQAIELFEEMLI 523

Query: 243 NGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRV 350
            G+ P    F   +++C+    +++G +    + RV
Sbjct: 524 EGILPDRITFLTVLSACSHAGLVKEGHRYFNSMSRV 559


>ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508713722|gb|EOY05619.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 788

 Score =  309 bits (791), Expect = 5e-82
 Identities = 146/208 (70%), Positives = 177/208 (85%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKC K++ AR +F+    +DLVSWNA+LS YV+AG+IDE  + F EM E+N+L+W VMIS
Sbjct: 330 WKCDKVDWAREVFNNMPVRDLVSWNAILSGYVNAGRIDEGMSFFREMPERNLLTWIVMIS 389

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GEE LKLFN+MKS G EPCDY+F+GAITSCA+L AL+ GRQLH QL+R+GFDS
Sbjct: 390 GLAQNGFGEEGLKLFNQMKSEGFEPCDYSFAGAITSCAMLGALKHGRQLHAQLVRLGFDS 449

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY RCGA++AA  +F TMP +D VSWNAMIAA GQHGHG +A++L+E+ML
Sbjct: 450 SLSAGNALITMYARCGAVEAASVLFHTMPCVDSVSWNAMIAALGQHGHGVQALELFEQML 509

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGK 626
           +E ILPDRITFLTVLSACSHAGLV EG+
Sbjct: 510 KEGILPDRITFLTVLSACSHAGLVKEGQ 537



 Score =  133 bits (334), Expect = 5e-29
 Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
 Frame = +3

Query: 9   CGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGL 188
           C  + +AR +FD    KD +SW  M++ YV   ++D A+ + + M EK  ++W  MISG 
Sbjct: 196 CTLMFEARKLFDEMSEKDELSWTTMVTGYVKNDELDAARELVDGMNEKLAVAWNAMISGY 255

Query: 189 AQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGF---- 356
             HG  EEAL +F +M   G++  ++ ++  I+ CA     + G+Q+H  ++R       
Sbjct: 256 VHHGRYEEALDMFRKMYFMGIKMDEFTYTSIISGCAHAGLFQLGQQVHAYVLRTEGKPTP 315

Query: 357 DSSLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEE 536
           D SL   NAL+T+Y +C  +D A  +F  MP  D VSWNA+++ +   G   E +  + E
Sbjct: 316 DFSLPVNNALVTLYWKCDKVDWAREVFNNMPVRDLVSWNAILSGYVNAGRIDEGMSFFRE 375

Query: 537 MLEEHILPDRITFLTVLSACSHAGLVDEGKK 629
           M E ++L    T++ ++S  +  G  +EG K
Sbjct: 376 MPERNLL----TWIVMISGLAQNGFGEEGLK 402



 Score =  100 bits (248), Expect = 5e-19
 Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 34/242 (14%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMI 179
           K  +I+ ARN+FD     D+VS  +++ AY ++G I +A+ +F E  +  ++ + +  MI
Sbjct: 60  KSSRIDYARNLFDKIPAPDIVSRTSLVLAYSTSGNIKKAREMFEETPLSIRDSVFYNAMI 119

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVGF 356
           +G +++  G   +KLF +M  +   P ++ F+  +   A++   E Q +Q+H  + + G 
Sbjct: 120 TGFSRNEDGHACIKLFRQMLRDEFRPDNFTFTSVLGGLALVVDREMQCKQMHCTVFKSGT 179

Query: 357 DSSLSAGNALITMYGRCGALDAAYSMFLTMPYLD-------------------------- 458
               S  NAL+++Y  C  +  A  +F  M   D                          
Sbjct: 180 VFVTSVLNALVSVYVNCTLMFEARKLFDEMSEKDELSWTTMVTGYVKNDELDAARELVDG 239

Query: 459 -----PVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVDEG 623
                 V+WNAMI+ +  HG   EA+ ++ +M    I  D  T+ +++S C+HAGL   G
Sbjct: 240 MNEKLAVAWNAMISGYVHHGRYEEALDMFRKMYFMGIKMDEFTYTSIISGCAHAGLFQLG 299

Query: 624 KK 629
           ++
Sbjct: 300 QQ 301



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
 Frame = +3

Query: 63  LVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSGEEALKLFNRMKS 242
           L + NA+++ Y   G ++ A  +F+ M   + +SW  MI+ L QHG G +AL+LF +M  
Sbjct: 451 LSAGNALITMYARCGAVEAASVLFHTMPCVDSVSWNAMIAALGQHGHGVQALELFEQMLK 510

Query: 243 NGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSSLSAGN----ALITMYGRCG 410
            G+ P    F   +++C+    +++G+     + R+     L+ G      L+ +  R G
Sbjct: 511 EGILPDRITFLTVLSACSHAGLVKEGQYYFDSMHRL---YRLTPGEDHYARLVDLLCRAG 567

Query: 411 ALDAAYSMFLTMPYLD--PVSWNAMIAAFGQHGH---GAEAIKLYEEMLEEH 551
               A  +  +MP+    PV W A++A    HG+   G +A +   E++ +H
Sbjct: 568 KFLEAKDVLTSMPFEPGAPV-WEALLAGCRTHGNVDLGIQAAERLIELMPQH 618


>gb|EPS72239.1| hypothetical protein M569_02517, partial [Genlisea aurea]
          Length = 786

 Score =  304 bits (779), Expect = 1e-80
 Identities = 154/210 (73%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           W+CGKI QA+ +FD A  KDLVS NAMLSA+V  GK+ EAK IF+ M EKN LSWTVMIS
Sbjct: 327 WRCGKILQAKQVFDGAPIKDLVSCNAMLSAFVGCGKLREAKRIFDGMPEKNHLSWTVMIS 386

Query: 183 GLAQHGSGEEALKLFNRMK-SNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFD 359
           GLAQ GSGEEALKLFN M+   GL+PCDYAF+G I SCAVL+ALEQGRQLH QLIR+GFD
Sbjct: 387 GLAQQGSGEEALKLFNLMRLQEGLKPCDYAFAGGIISCAVLSALEQGRQLHSQLIRLGFD 446

Query: 360 SSLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEM 539
           SSLSAGNALITMY RCG LD A + F  MP LD VSWNAMIAA GQHGHG  A++ +  M
Sbjct: 447 SSLSAGNALITMYARCGVLDDASNAFSAMPVLDSVSWNAMIAALGQHGHGKAALEYFRVM 506

Query: 540 LEEHILPDRITFLTVLSACSHAGLVDEGKK 629
           L E I PDRITFLTVLSACSHAGLV+EG+K
Sbjct: 507 LREEIRPDRITFLTVLSACSHAGLVEEGRK 536



 Score =  113 bits (283), Expect = 4e-23
 Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 5/213 (2%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISG 185
           KC  +  AR +FD    KD +SW  +++ YV    +  A+ +F+ M E+ +++W  M+SG
Sbjct: 191 KCESMASARLLFDEMVHKDELSWTTIIAGYVKNDDLAAAREVFDGMDEELVVAWNAMMSG 250

Query: 186 LAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLI-----RV 350
             Q G   E   +   M S G+   D+ ++  +++CA       GR+LHG +I     R+
Sbjct: 251 YVQKGMVSEVFGMLREMYSRGINFDDFTYTSVLSACADSELFLHGRELHGYIIKTEAKRL 310

Query: 351 GFDSSLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLY 530
             D  +S  NALIT+Y RCG +  A  +F   P  D VS NAM++AF   G   EA +++
Sbjct: 311 TSDLVVSIHNALITLYWRCGKILQAKQVFDGAPIKDLVSCNAMLSAFVGCGKLREAKRIF 370

Query: 531 EEMLEEHILPDRITFLTVLSACSHAGLVDEGKK 629
           + M E+    + +++  ++S  +  G  +E  K
Sbjct: 371 DGMPEK----NHLSWTVMISGLAQQGSGEEALK 399



 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 35/243 (14%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMI 179
           K    + AR +FD     D+V+   +++AY S G    A+ +F+   +  ++ + +  MI
Sbjct: 55  KSSCFDYARKMFDEIPQPDVVTRTTLIAAYSSYGNPKMARVLFDATPVGIRDNICYNAMI 114

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGR--QLHGQLIRVG 353
           +  + +  G  ALKLF  MK +G  P  ++++  + + A   +  + R  QLH  +I+ G
Sbjct: 115 TCYSHNDDGCAALKLFVDMKRDGFTPDFFSYTSVLAALAPPISDRESRCHQLHCAVIKSG 174

Query: 354 FDSSLSAGNALITMYGRCGALDAAYSMFLTMPYLDP------------------------ 461
                S  NAL+++Y +C ++ +A  +F  M + D                         
Sbjct: 175 CGQVTSVLNALVSVYVKCESMASARLLFDEMVHKDELSWTTIIAGYVKNDDLAAAREVFD 234

Query: 462 -------VSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVDE 620
                  V+WNAM++ + Q G  +E   +  EM    I  D  T+ +VLSAC+ + L   
Sbjct: 235 GMDEELVVAWNAMMSGYVQKGMVSEVFGMLREMYSRGINFDDFTYTSVLSACADSELFLH 294

Query: 621 GKK 629
           G++
Sbjct: 295 GRE 297


>ref|XP_007216398.1| hypothetical protein PRUPE_ppa022530mg [Prunus persica]
           gi|462412548|gb|EMJ17597.1| hypothetical protein
           PRUPE_ppa022530mg [Prunus persica]
          Length = 689

 Score =  303 bits (777), Expect = 2e-80
 Identities = 148/208 (71%), Positives = 172/208 (82%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           +KCGK+++AR IF+    KDLVSWNA+LS YVSAG+I EAK+ F EM E++IL+WTVMIS
Sbjct: 231 YKCGKLDEARYIFNNMPVKDLVSWNAILSGYVSAGRIQEAKSFFKEMPERSILTWTVMIS 290

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GEEA+ LFN+M+S G EPCDYAFSGAITSCA L ALE GRQLH QLI +GFDS
Sbjct: 291 GLAQNGLGEEAMTLFNQMRSEGFEPCDYAFSGAITSCAALGALEHGRQLHAQLISLGFDS 350

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSA NALITMY RCG    A S+FLTMP +D VSWNAMIAA  QHGHG +AI L+E+ML
Sbjct: 351 SLSAANALITMYARCGVFKDANSVFLTMPCIDSVSWNAMIAALAQHGHGVQAIDLFEQML 410

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGK 626
           +  ILPDRITFL +LSACSHAGLV EG+
Sbjct: 411 KADILPDRITFLIILSACSHAGLVKEGR 438



 Score =  127 bits (320), Expect = 2e-27
 Identities = 69/205 (33%), Positives = 114/205 (55%), Gaps = 4/205 (1%)
 Frame = +3

Query: 18  INQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQH 197
           + +ARN+F+    +D +SW  M++ Y+    +  A+ + + M E+  + W  MISG A H
Sbjct: 100 MGEARNLFNEMPERDELSWTTMITGYIRNEDLHAARELLDGMDERMEVVWNAMISGYAHH 159

Query: 198 GSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRV----GFDSS 365
            S +EAL LF +M+  G+   ++ ++  I++CA     + G+Q+H  ++R       D S
Sbjct: 160 NSFQEALLLFRKMRLLGIHQDEFTYTSVISTCANNGQFQLGKQVHAYILRTEAKPTVDFS 219

Query: 366 LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLE 545
           LS  N L+T+Y +CG LD A  +F  MP  D VSWNA+++ +   G   EA   ++EM E
Sbjct: 220 LSVNNTLLTLYYKCGKLDEARYIFNNMPVKDLVSWNAILSGYVSAGRIQEAKSFFKEMPE 279

Query: 546 EHILPDRITFLTVLSACSHAGLVDE 620
             IL    T+  ++S  +  GL +E
Sbjct: 280 RSIL----TWTVMISGLAQNGLGEE 300



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 41/201 (20%)
 Frame = +3

Query: 150 KNILSWTVMISGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCA-VLAALEQGRQ 326
           ++ + +  MI+G +++  G  +++LF  M+  G  P D+ ++  ++  A ++ A +Q +Q
Sbjct: 2   RDTVCYNAMITGYSRNNDGYASIRLFCEMRQGGFRPNDFTYTTVLSGVAQIVDAEKQCQQ 61

Query: 327 LHGQLIRVGFDSSLSAGNALITMYGRCGA---------LDAAYSMFLTMPYLDPVS---- 467
           LH  +++ G   + S  NAL+++Y RC +         +  A ++F  MP  D +S    
Sbjct: 62  LHCAVVKSGTGFATSVWNALLSVYVRCASSPLVSSSSLMGEARNLFNEMPERDELSWTTM 121

Query: 468 ---------------------------WNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDR 566
                                      WNAMI+ +  H    EA+ L+ +M    I  D 
Sbjct: 122 ITGYIRNEDLHAARELLDGMDERMEVVWNAMISGYAHHNSFQEALLLFRKMRLLGIHQDE 181

Query: 567 ITFLTVLSACSHAGLVDEGKK 629
            T+ +V+S C++ G    GK+
Sbjct: 182 FTYTSVISTCANNGQFQLGKQ 202


>ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339271|gb|EFH69688.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 790

 Score =  302 bits (774), Expect = 5e-80
 Identities = 145/209 (69%), Positives = 171/209 (81%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           +KCGK N+AR IF+    KDLVSWNA+LS YVS+G I EAK IF EM+EKNILSW +MIS
Sbjct: 331 YKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLA++G GEE LKLF+ MK  G EPCDYAFSGAI SCAVL A   G+Q H QL+++GFDS
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDS 450

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY +CG ++ A  +F TMP LD VSWNA+IAA GQHGHG EA+ +YEEML
Sbjct: 451 SLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEML 510

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           ++ I PDRITFLTVL+ACSHAGLVD+G+K
Sbjct: 511 KKGIRPDRITFLTVLTACSHAGLVDQGRK 539



 Score =  122 bits (306), Expect = 9e-26
 Identities = 69/205 (33%), Positives = 116/205 (56%), Gaps = 1/205 (0%)
 Frame = +3

Query: 18  INQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREK-NILSWTVMISGLAQ 194
           ++ AR +FD    KD  SW  M++ YV  G  D  K +   M E   ++++  MISG   
Sbjct: 204 LHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVN 263

Query: 195 HGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSSLSA 374
            G  +EAL++  RM S+G+E  ++ +   I +CA    L+ G+Q+H  ++R   D S   
Sbjct: 264 CGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHF 322

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHI 554
            N+L+T+Y +CG  + A ++F  MP  D VSWNA+++ +   GH  EA  +++EM E++I
Sbjct: 323 DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382

Query: 555 LPDRITFLTVLSACSHAGLVDEGKK 629
           L    +++ ++S  +  G  +EG K
Sbjct: 383 L----SWMIMISGLAENGFGEEGLK 403



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 39/247 (15%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMI 179
           K  +++ AR +FD     D ++   M+S Y ++G I  A+++F E  +  ++ + +  MI
Sbjct: 61  KSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMI 120

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVGF 356
           +G + +  G  A+ LF +MK  G +P D+ ++  +   A++   E Q  Q H   ++ G 
Sbjct: 121 TGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGA 180

Query: 357 DSSLSAGNALITMYGRCGA----LDAAYSMFLTMPYLDPVSW------------------ 470
               S  NAL+++Y RC +    L +A  +F  +P  D  SW                  
Sbjct: 181 GYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKE 240

Query: 471 --------------NAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAG 608
                         NAMI+ +   G   EA+++   M+   I  D  T+ +V+ AC++A 
Sbjct: 241 LLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANAR 300

Query: 609 LVDEGKK 629
           L+  GK+
Sbjct: 301 LLQLGKQ 307


>ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Solanum tuberosum]
          Length = 804

 Score =  301 bits (772), Expect = 8e-80
 Identities = 140/208 (67%), Positives = 180/208 (86%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKCG+++ AR +FD    KDLVSWNA+LSAYVSAG+I+EAK  F+EM EKN L+WTVMIS
Sbjct: 346 WKCGRVDDARKVFDNLVFKDLVSWNAVLSAYVSAGRINEAKLFFDEMPEKNSLAWTVMIS 405

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GE+ LKLFN+M+  G+E CDYAF+GAITSCAVL ALE G QLH QLI+ G+DS
Sbjct: 406 GLAQNGLGEDGLKLFNQMRVKGIELCDYAFAGAITSCAVLGALETGCQLHAQLIQRGYDS 465

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNAL+T YGR G ++AA ++FLTMP +D VSWNA++AA GQHG+G +A++L+E+ML
Sbjct: 466 SLSAGNALVTFYGRSGVIEAARNVFLTMPCVDLVSWNALVAALGQHGYGVQAVELFEQML 525

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGK 626
           +E+I+PDRI+FLTV+SACSHAGL+++G+
Sbjct: 526 DENIMPDRISFLTVISACSHAGLIEKGR 553



 Score =  112 bits (279), Expect = 1e-22
 Identities = 62/204 (30%), Positives = 111/204 (54%)
 Frame = +3

Query: 18  INQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQH 197
           ++ A  +F     +D +SW  +++ YV    +D A+ +F+ M EK +++W  MISG    
Sbjct: 219 MDSASKLFYEMPERDDLSWTTIITGYVKNDDLDAARKVFDGMDEKLLVAWNAMISGYVHK 278

Query: 198 GSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSSLSAG 377
           G   EAL +  +M   G++P ++  +  +++CA       G+Q+H  + R      +S  
Sbjct: 279 GFIFEALDMLRKMYLAGMKPDEFTCTSILSACADAGLFLLGKQVHAYVRRTEEKIHVSVY 338

Query: 378 NALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHIL 557
           NALIT+Y +CG +D A  +F  + + D VSWNA+++A+   G   EA   ++EM E++ L
Sbjct: 339 NALITLYWKCGRVDDARKVFDNLVFKDLVSWNAVLSAYVSAGRINEAKLFFDEMPEKNSL 398

Query: 558 PDRITFLTVLSACSHAGLVDEGKK 629
                +  ++S  +  GL ++G K
Sbjct: 399 ----AWTVMISGLAQNGLGEDGLK 418



 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 43/244 (17%)
 Frame = +3

Query: 27  ARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMISGLAQHG 200
           A+++FD     D+V+   M++AY ++G+   A+ +F++  +  ++ + +  MI+G + + 
Sbjct: 78  AKHLFDRIPQPDVVARTTMIAAYSASGEPKLAREVFDKTPLSIRDTVCYNAMITGYSHNN 137

Query: 201 SGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQG-RQLHGQLIRVGFDSSLSAG 377
            G  A+KLF  M+    +P +Y ++  + + A++A  E   RQLH  + + G  +     
Sbjct: 138 DGHAAIKLFLDMRWKNFQPDEYTYTSVLAALALIADHEMHCRQLHCAVAKSGMANFKCVV 197

Query: 378 NALITMYGRCGA---------LDAAYSMFLTMPYLDP----------------------- 461
           NALI++Y RC +         +D+A  +F  MP  D                        
Sbjct: 198 NALISVYVRCASSPLASSLLLMDSASKLFYEMPERDDLSWTTIITGYVKNDDLDAARKVF 257

Query: 462 --------VSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVD 617
                   V+WNAMI+ +   G   EA+ +  +M    + PD  T  ++LSAC+ AGL  
Sbjct: 258 DGMDEKLLVAWNAMISGYVHKGFIFEALDMLRKMYLAGMKPDEFTCTSILSACADAGLFL 317

Query: 618 EGKK 629
            GK+
Sbjct: 318 LGKQ 321


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
           gi|449504088|ref|XP_004162249.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  301 bits (770), Expect = 1e-79
 Identities = 140/209 (66%), Positives = 178/209 (85%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WK GK++ AR IF     KD+++WN +LS YV+AG+++EAK+ F +M EKN+L+WTVMIS
Sbjct: 339 WKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMIS 398

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GE+ALKLFN+MK +G EP DYAF+GAIT+C+VL ALE GRQLH Q++ +G DS
Sbjct: 399 GLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDS 458

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           +LS GNA+ITMY RCG ++AA +MFLTMP++DPVSWN+MIAA GQHGHG +AI+LYE+ML
Sbjct: 459 TLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQML 518

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           +E ILPDR TFLTVLSACSHAGLV+EG +
Sbjct: 519 KEGILPDRRTFLTVLSACSHAGLVEEGNR 547



 Score =  112 bits (280), Expect = 9e-23
 Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 35/236 (14%)
 Frame = +3

Query: 27  ARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSG 206
           AR +FD    ++   W  +++ YV  G +  A+ I + M E+  ++W  MISG   HG  
Sbjct: 211 ARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLF 270

Query: 207 EEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGF----DSSLSA 374
           E+AL LF +M+  G++  +  ++  I++CA       G+Q+H  +++       D  LS 
Sbjct: 271 EDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSV 330

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWN--------------------------- 473
           GN LIT+Y + G +D A  +F  MP  D ++WN                           
Sbjct: 331 GNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNL 390

Query: 474 ----AMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVDEGKK 629
                MI+   Q+G G +A+KL+ +M  +   P+   F   ++ACS  G ++ G++
Sbjct: 391 LTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQ 446



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 43/252 (17%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVM 176
           WK      AR +FD     D+++   +++AY + G +  A+ IFNE  +  ++ + +  M
Sbjct: 59  WKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAM 118

Query: 177 ISGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVG 353
           I+G +    G  A++LF  M+    +P D+ F+  +++  ++   E Q  Q+HG +++ G
Sbjct: 119 ITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFG 178

Query: 354 FDSSLSAGNALITMYGRC----------------------------------------GA 413
            +   +  NAL+++Y +C                                        G 
Sbjct: 179 IEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGD 238

Query: 414 LDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSA 593
           L  A  +  TM     ++WNAMI+ +  HG   +A+ L+ +M    +  D  T+ +V+SA
Sbjct: 239 LTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISA 298

Query: 594 CSHAGLVDEGKK 629
           C+  G    GK+
Sbjct: 299 CADGGFFLLGKQ 310



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
 Frame = +3

Query: 75  NAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGSGEEALKLFNRMKSNGLE 254
           NAM++ Y   G ++ A+ +F  M   + +SW  MI+ L QHG G +A++L+ +M   G+ 
Sbjct: 464 NAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGIL 523

Query: 255 PCDYAFSGAITSCAVLAALEQG-RQLHGQLIRVGFDSSLSAGNALITMYGRCGALDAAYS 431
           P    F   +++C+    +E+G R  +  L   G          +I ++ R G    A +
Sbjct: 524 PDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKN 583

Query: 432 MFLTMPY--LDPVSWNAMIAAFGQHGH---GAEAIKLYEEMLEEH 551
           +  +MP+    P+ W A++A    HG+   G EA +   +++ +H
Sbjct: 584 VIDSMPFEARAPI-WEALLAGCRTHGNMDLGIEAAEKLFKLIPQH 627


>ref|XP_006306802.1| hypothetical protein CARUB_v10008344mg [Capsella rubella]
           gi|482575513|gb|EOA39700.1| hypothetical protein
           CARUB_v10008344mg [Capsella rubella]
          Length = 790

 Score =  300 bits (768), Expect = 2e-79
 Identities = 144/209 (68%), Positives = 171/209 (81%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           +KCGK ++AR IF+    KDLVSWNA+LS YVS+G I EAK IF EM+EKNIL+W +MIS
Sbjct: 331 YKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILTWMIMIS 390

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLA++G GEE LKLF+ MK  G EPCDYAFSGAI SCAVL A   G+Q H QL+++GFDS
Sbjct: 391 GLAENGFGEEGLKLFSCMKKEGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDS 450

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY +CG +D A  +F T+P LD VSWNA+IAA GQHGHGAEA+ +YEEML
Sbjct: 451 SLSAGNALITMYAKCGVVDEARQVFRTIPCLDSVSWNALIAALGQHGHGAEAVDVYEEML 510

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           +E I PDRIT LTVL+ACSHAGLVD+G+K
Sbjct: 511 KEGIRPDRITLLTVLTACSHAGLVDQGRK 539



 Score =  127 bits (320), Expect = 2e-27
 Identities = 70/205 (34%), Positives = 116/205 (56%), Gaps = 1/205 (0%)
 Frame = +3

Query: 18  INQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREK-NILSWTVMISGLAQ 194
           ++ AR +FD    KD  SW  M++ YV  G  D  K +   M E   ++++  MISG   
Sbjct: 204 LHSARKVFDEMPEKDERSWTTMITGYVKNGCFDLGKELLEVMDENMKVVAYNAMISGYVN 263

Query: 195 HGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSSLSA 374
            G  +EAL++  RM S+G+E  ++ +   I +CA    L+ G+Q+H  ++R   D S   
Sbjct: 264 RGLYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHF 322

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHI 554
            N+L+++Y +CG  D A ++F  MP  D VSWNA+++ +   GH  EA  +++EM E++I
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382

Query: 555 LPDRITFLTVLSACSHAGLVDEGKK 629
           L    T++ ++S  +  G  +EG K
Sbjct: 383 L----TWMIMISGLAENGFGEEGLK 403



 Score =  102 bits (253), Expect = 1e-19
 Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 39/247 (15%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMI 179
           K  ++  AR +FD     D ++   M+S Y ++G I  A+ +F E  +  ++ + +  MI
Sbjct: 61  KSSELRYARELFDEISEPDKIARTTMVSGYCASGDITLARGVFEETSVSMRDTVMYNAMI 120

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVGF 356
           +G + +  G  A+KLF +MK  G +P ++ F+  + + A++   E Q  Q H   ++ G 
Sbjct: 121 TGFSHNNDGYSAIKLFCKMKHEGFQPDNFTFASVLAALALVVEEEKQCLQFHAAALKSGA 180

Query: 357 DSSLSAGNALITMYGRCGA----LDAAYSMFLTMPYLDPVSW------------------ 470
            S  S  NAL+++Y +C +    L +A  +F  MP  D  SW                  
Sbjct: 181 GSITSVSNALVSVYSKCASSPSLLHSARKVFDEMPEKDERSWTTMITGYVKNGCFDLGKE 240

Query: 471 --------------NAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAG 608
                         NAMI+ +   G   EA+++   M+   I  D  T+ +V+ AC+ AG
Sbjct: 241 LLEVMDENMKVVAYNAMISGYVNRGLYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300

Query: 609 LVDEGKK 629
           L+  GK+
Sbjct: 301 LLQLGKQ 307


>ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Solanum lycopersicum]
          Length = 804

 Score =  300 bits (767), Expect = 3e-79
 Identities = 140/208 (67%), Positives = 178/208 (85%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKCG+++ AR +FD    KD+VSWNA+LSAYVSAG+I EAK  F+EM EKN L+WTVMIS
Sbjct: 346 WKCGRVDDARKVFDNLVFKDIVSWNAVLSAYVSAGRISEAKLFFDEMPEKNSLAWTVMIS 405

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ+G GE+ LKLFN+M+  G+E CDYAF+GAITSCAVL ALE G QLH QLI+ G+DS
Sbjct: 406 GLAQNGLGEDGLKLFNQMRVKGIELCDYAFAGAITSCAVLGALETGCQLHAQLIQRGYDS 465

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNAL+T YGR G ++AA ++FLTMP +D VSWNA++AA GQHG+G +A+ L+E+ML
Sbjct: 466 SLSAGNALVTFYGRSGVIEAARNVFLTMPCVDLVSWNALVAALGQHGYGVQAVGLFEQML 525

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGK 626
           +E+I+PDRI+FLTV+SACSHAGLV++G+
Sbjct: 526 DENIMPDRISFLTVISACSHAGLVEKGR 553



 Score =  113 bits (282), Expect = 5e-23
 Identities = 62/204 (30%), Positives = 112/204 (54%)
 Frame = +3

Query: 18  INQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQH 197
           ++ A  +F     +D +SW  +++ YV    +D A+ +F+ M EK +++W  MISG    
Sbjct: 219 MDSASKLFYEMPERDDLSWTTIITGYVKNDDLDAARKVFDGMDEKLLVAWNAMISGYVHK 278

Query: 198 GSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSSLSAG 377
           G   EAL +  +M   G++P ++  +  +++CA       G+Q+H  + R      +S  
Sbjct: 279 GFIFEALDMLRKMYLAGMKPDEFTCTSILSACADAGLFLLGKQVHAYVKRTEEKIHVSVY 338

Query: 378 NALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHIL 557
           NALIT+Y +CG +D A  +F  + + D VSWNA+++A+   G  +EA   ++EM E++ L
Sbjct: 339 NALITLYWKCGRVDDARKVFDNLVFKDIVSWNAVLSAYVSAGRISEAKLFFDEMPEKNSL 398

Query: 558 PDRITFLTVLSACSHAGLVDEGKK 629
                +  ++S  +  GL ++G K
Sbjct: 399 ----AWTVMISGLAQNGLGEDGLK 418



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 43/244 (17%)
 Frame = +3

Query: 27  ARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMISGLAQHG 200
           A+++FD     D+V+   M++AY ++G+   A+ IF++  +  ++ + +  MI+G + + 
Sbjct: 78  AKHLFDRIPQPDVVARTTMIAAYSASGEPKLAREIFDKTPLSFRDTVCYNAMITGYSHNN 137

Query: 201 SGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQG-RQLHGQLIRVGFDSSLSAG 377
            G  A+KLF  M+    +P +Y ++  + + A++A  E   RQ+H  + + G  +     
Sbjct: 138 HGHAAIKLFLDMRWKNFQPDEYTYTSVLAALALIADHEMHCRQMHCAVAKSGMANFKCVV 197

Query: 378 NALITMYGRCGA---------LDAAYSMFLTMPYLDP----------------------- 461
           NALI +Y RC +         +D+A  +F  MP  D                        
Sbjct: 198 NALICVYVRCASSPLASSLLLMDSASKLFYEMPERDDLSWTTIITGYVKNDDLDAARKVF 257

Query: 462 --------VSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVD 617
                   V+WNAMI+ +   G   EA+ +  +M    + PD  T  ++LSAC+ AGL  
Sbjct: 258 DGMDEKLLVAWNAMISGYVHKGFIFEALDMLRKMYLAGMKPDEFTCTSILSACADAGLFL 317

Query: 618 EGKK 629
            GK+
Sbjct: 318 LGKQ 321


>ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g25360 gi|11067273|gb|AAG28801.1|AC079374_4
           hypothetical protein [Arabidopsis thaliana]
           gi|332192491|gb|AEE30612.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  298 bits (764), Expect = 7e-79
 Identities = 144/209 (68%), Positives = 171/209 (81%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           +KCGK ++AR IF+    KDLVSWNA+LS YVS+G I EAK IF EM+EKNILSW +MIS
Sbjct: 331 YKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLA++G GEE LKLF+ MK  G EPCDYAFSGAI SCAVL A   G+Q H QL+++GFDS
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDS 450

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY +CG ++ A  +F TMP LD VSWNA+IAA GQHGHGAEA+ +YEEML
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEML 510

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           ++ I PDRIT LTVL+ACSHAGLVD+G+K
Sbjct: 511 KKGIRPDRITLLTVLTACSHAGLVDQGRK 539



 Score =  124 bits (311), Expect = 2e-26
 Identities = 67/205 (32%), Positives = 116/205 (56%), Gaps = 1/205 (0%)
 Frame = +3

Query: 18  INQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREK-NILSWTVMISGLAQ 194
           ++ AR +FD    KD  SW  M++ YV  G  D  + +   M +   ++++  MISG   
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263

Query: 195 HGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSSLSA 374
            G  +EAL++  RM S+G+E  ++ +   I +CA    L+ G+Q+H  ++R   D S   
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHF 322

Query: 375 GNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHI 554
            N+L+++Y +CG  D A ++F  MP  D VSWNA+++ +   GH  EA  +++EM E++I
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382

Query: 555 LPDRITFLTVLSACSHAGLVDEGKK 629
           L    +++ ++S  +  G  +EG K
Sbjct: 383 L----SWMIMISGLAENGFGEEGLK 403



 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 39/247 (15%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMI 179
           K  ++N AR +FD     D ++   M+S Y ++G I  A+ +F +  +  ++ + +  MI
Sbjct: 61  KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMI 120

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVGF 356
           +G + +  G  A+ LF +MK  G +P ++ F+  +   A++A  E Q  Q H   ++ G 
Sbjct: 121 TGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGA 180

Query: 357 DSSLSAGNALITMYGRCGA----LDAAYSMFLTMPYLDPVSW------------------ 470
               S  NAL+++Y +C +    L +A  +F  +   D  SW                  
Sbjct: 181 GYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEE 240

Query: 471 --------------NAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAG 608
                         NAMI+ +   G   EA+++   M+   I  D  T+ +V+ AC+ AG
Sbjct: 241 LLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300

Query: 609 LVDEGKK 629
           L+  GK+
Sbjct: 301 LLQLGKQ 307


>ref|XP_002302000.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344162|gb|EEE81273.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 797

 Score =  298 bits (763), Expect = 9e-79
 Identities = 141/209 (67%), Positives = 172/209 (82%)
 Frame = +3

Query: 3   WKCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           WKCGK++ A+ IF+    +DLVSWN +LS YV+   +DEAK+ FNEM EKNILSW +MIS
Sbjct: 339 WKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMIS 398

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           GLAQ G  EEALK FNRMK  G EPCDYAF+GAI SC+VL +L+ GRQLH Q++R G++S
Sbjct: 399 GLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYES 458

Query: 363 SLSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEML 542
           SLSAGNALITMY RCG +DAA+ +F+ MP +D +SWNAMIAA GQHG G +AI+L+EEML
Sbjct: 459 SLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEML 518

Query: 543 EEHILPDRITFLTVLSACSHAGLVDEGKK 629
           +E ILPDRI+FLTV+SACSHAGLV EG+K
Sbjct: 519 KEGILPDRISFLTVISACSHAGLVKEGRK 547



 Score =  110 bits (275), Expect = 3e-22
 Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
 Frame = +3

Query: 24  QARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHGS 203
           +AR +FD    +D +SW  +++ YV    +D AK   N   +K  ++W  MISG A  G 
Sbjct: 210 EARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGL 269

Query: 204 GEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRV----GFDSSLS 371
             EA ++F +M  + ++  ++ F+  I+ CA       G+++H   ++       D ++ 
Sbjct: 270 YLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMP 329

Query: 372 AGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEH 551
             NALIT Y +CG +D A  +F  MP  D VSWN +++ +       EA   + EM E++
Sbjct: 330 VNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKN 389

Query: 552 ILPDRITFLTVLSACSHAGLVDEGKK 629
           IL    +++ ++S  +  G  +E  K
Sbjct: 390 IL----SWIIMISGLAQIGFAEEALK 411



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 43/251 (17%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNE--MREKNILSWTVMI 179
           K  K+N AR +FD     D+V+   +++AY +AG +  ++ IF++  +  ++ + +  MI
Sbjct: 60  KSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMI 119

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQG-RQLHGQLIRVGF 356
           +  + +  G  A++LF  M+ +   P +Y F+  + + A++A  E+  +QLH  +++ G 
Sbjct: 120 TAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGT 179

Query: 357 DSSLSAGNALITMYGRCGALDAAYS---------MFLTMPYLDP---------------- 461
               S  NALI+ Y +C A  +A S         +F  MP  D                 
Sbjct: 180 GFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDL 239

Query: 462 ---------------VSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSAC 596
                          V+WNAMI+ +   G   EA +++ +M+   I  D  TF +V+S C
Sbjct: 240 DAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVC 299

Query: 597 SHAGLVDEGKK 629
           ++AG    GK+
Sbjct: 300 ANAGCFRLGKE 310


>ref|XP_007144135.1| hypothetical protein PHAVU_007G131600g [Phaseolus vulgaris]
           gi|561017325|gb|ESW16129.1| hypothetical protein
           PHAVU_007G131600g [Phaseolus vulgaris]
          Length = 787

 Score =  297 bits (761), Expect = 2e-78
 Identities = 139/207 (67%), Positives = 175/207 (84%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISG 185
           +CGK+ +A+ +FD    KDLVSWNA+LS YV+A  ++EA +IF EM E+++L+WTVMISG
Sbjct: 330 RCGKLVEAKRVFDKMPVKDLVSWNAILSGYVNARCVEEANSIFREMPERSLLTWTVMISG 389

Query: 186 LAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSS 365
           LAQ+G GEE LKLFN+MK  GLEPCDYA++GAI SC+VL +L+ G+QLH Q+ R+G DSS
Sbjct: 390 LAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQITRLGHDSS 449

Query: 366 LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLE 545
           LS GNALITMY RCG ++AA ++F TMPY+D VSWNAMIAA  QHGHG +AI+LYE+ML+
Sbjct: 450 LSVGNALITMYARCGLVEAADTVFFTMPYVDSVSWNAMIAALAQHGHGVKAIQLYEQMLK 509

Query: 546 EHILPDRITFLTVLSACSHAGLVDEGK 626
           E+ILPDRITFLT+LSACSHAGLV EG+
Sbjct: 510 ENILPDRITFLTILSACSHAGLVKEGR 536



 Score =  107 bits (268), Expect = 2e-21
 Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 37/244 (15%)
 Frame = +3

Query: 9   CGKINQARNIFDAAC--TKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           C  +  AR +FD A    +D  SW  +++ YV  G +  A+ + + M +   ++W  MIS
Sbjct: 193 CLVMAAARKLFDEAPHGLRDEPSWTTIIAGYVRNGDLVAARELLDGMTDHIAVAWNAMIS 252

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           G    G  E A  L  RM S G++  +Y ++  I++ +       GRQ+H  ++R     
Sbjct: 253 GYVHRGLYEAAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFYIGRQVHAYVLRTVVQP 312

Query: 363 S----LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNA------------------ 476
           S    LS  N LIT Y RCG L  A  +F  MP  D VSWNA                  
Sbjct: 313 SQHFVLSVNNVLITFYTRCGKLVEAKRVFDKMPVKDLVSWNAILSGYVNARCVEEANSIF 372

Query: 477 -------------MIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVD 617
                        MI+   Q+G G E +KL+ +M  E + P    +   +++CS  G +D
Sbjct: 373 REMPERSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLD 432

Query: 618 EGKK 629
            G++
Sbjct: 433 NGQQ 436



 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 45/253 (17%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFN--EMREKNILSWTVMI 179
           K   I  AR++FD     D+V+   +LSAY +AG I  A  +FN   +  ++ +S+  MI
Sbjct: 48  KSSNIPYARHLFDKISKPDIVATTTLLSAYSAAGNIKLAHQLFNATPLTIRDTVSYNAMI 107

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQG-RQLHGQLIRVGF 356
           +  +    G  AL+LF +MK  G  P  ++FS  + + +++A  E+  +Q H ++++ G 
Sbjct: 108 TAFSHSHDGYAALQLFVQMKRLGFVPDPFSFSSVLGALSLIADEERHCQQFHCEVLKRGV 167

Query: 357 DSSLSAGNALITMYGRCGA---------LDAAYSMFLTMPY------------------- 452
            S  S  NAL++ Y  C +         + AA  +F   P+                   
Sbjct: 168 LSGPSVLNALMSCYVSCASSPLVDSCLVMAAARKLFDEAPHGLRDEPSWTTIIAGYVRNG 227

Query: 453 --------LD------PVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLS 590
                   LD       V+WNAMI+ +   G    A  L   M    I  D  T+ +V+S
Sbjct: 228 DLVAARELLDGMTDHIAVAWNAMISGYVHRGLYEAAFDLLRRMHSLGIQLDEYTYTSVIS 287

Query: 591 ACSHAGLVDEGKK 629
           A S+AGL   G++
Sbjct: 288 AASNAGLFYIGRQ 300


>ref|XP_004495263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cicer arietinum]
          Length = 795

 Score =  297 bits (760), Expect = 2e-78
 Identities = 137/207 (66%), Positives = 177/207 (85%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISG 185
           K  ++ +AR +FD    +D+VSWNA+LS  ++A +I+EA +IF EM E+N+L+WTVMISG
Sbjct: 338 KYDRMVEARRVFDKMPVRDIVSWNAVLSGCINARRIEEANSIFREMPERNVLTWTVMISG 397

Query: 186 LAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSS 365
           LAQ+G GEE LKLFN+MKS GLEPCDYA++GAITSCAVL +L+ G+Q+H Q+IR+G DS 
Sbjct: 398 LAQNGFGEEGLKLFNQMKSEGLEPCDYAYAGAITSCAVLGSLDNGQQIHSQVIRLGHDSG 457

Query: 366 LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLE 545
           LSAGNALITMY RCG +++A S+FLTMPY+DP+SWNAMIAA  QHGHG +AI+L+E+ML+
Sbjct: 458 LSAGNALITMYARCGVVESAESVFLTMPYVDPISWNAMIAALAQHGHGVQAIELFEQMLK 517

Query: 546 EHILPDRITFLTVLSACSHAGLVDEGK 626
           E ILPDRITFLT+L+AC+HAGLV EG+
Sbjct: 518 EDILPDRITFLTILTACNHAGLVKEGR 544



 Score =  105 bits (263), Expect = 8e-21
 Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 41/242 (16%)
 Frame = +3

Query: 27  ARNIFDAACTKDLV--SWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHG 200
           AR +FD      +   SW  M++ YV    +D A+ + + M     ++W  MISG  + G
Sbjct: 203 ARKVFDEVPKNQVYEPSWTTMIAGYVRNDDLDAARELLDGMTYPIDVAWNAMISGYVRRG 262

Query: 201 SGEEALKLFNRMKSNGLEPCDYAFSGAITSCAV----LAALEQGRQLHGQLIRVGFDSS- 365
             EEA  +F RM S G++  +Y ++  I++CA     +     GRQ+HG ++R   + S 
Sbjct: 263 LYEEAFGMFRRMHSMGIQEDEYTYTSLISACASCNVRMGMFNCGRQVHGYVLRTVVEPSE 322

Query: 366 ---LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNA-------------------- 476
              +S  NALIT Y +   +  A  +F  MP  D VSWNA                    
Sbjct: 323 RFIMSVNNALITFYTKYDRMVEARRVFDKMPVRDIVSWNAVLSGCINARRIEEANSIFRE 382

Query: 477 -----------MIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVDEG 623
                      MI+   Q+G G E +KL+ +M  E + P    +   +++C+  G +D G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAYAGAITSCAVLGSLDNG 442

Query: 624 KK 629
           ++
Sbjct: 443 QQ 444



 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 45/243 (18%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFN--EMREKNILSWTVMI 179
           K   I  AR +FD     D+V+   +LSAY S+G I  A+ +FN   +   + +S+  MI
Sbjct: 52  KSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNIKLAQELFNTTPLTIHDTVSYNAMI 111

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVGF 356
           +  ++   G  ALKLF +MK     P  + FS   ++ + +A  E   + LH + I+ G 
Sbjct: 112 TAYSRGNDGHAALKLFLQMKRLSFLPDPFTFSSVFSALSSIADEEWHCQMLHCEAIKWGA 171

Query: 357 DSSLSAGNALITMYGRCGA----------------------------------------- 413
               S  NAL++ Y  C +                                         
Sbjct: 172 LLIPSVLNALLSCYVCCASSPLVDTSKLMASARKVFDEVPKNQVYEPSWTTMIAGYVRND 231

Query: 414 -LDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLS 590
            LDAA  +   M Y   V+WNAMI+ + + G   EA  ++  M    I  D  T+ +++S
Sbjct: 232 DLDAARELLDGMTYPIDVAWNAMISGYVRRGLYEEAFGMFRRMHSMGIQEDEYTYTSLIS 291

Query: 591 ACS 599
           AC+
Sbjct: 292 ACA 294


>ref|XP_003535453.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 787

 Score =  296 bits (757), Expect = 4e-78
 Identities = 140/207 (67%), Positives = 175/207 (84%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISG 185
           +CGK+ +AR +FD    KDLVSWNA+LS  V+A +I+EA +IF EM  +++L+WTVMISG
Sbjct: 330 RCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISG 389

Query: 186 LAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSS 365
           LAQ+G GEE LKLFN+MK  GLEPCDYA++GAI SC+VL +L+ G+QLH Q+I++G DSS
Sbjct: 390 LAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSS 449

Query: 366 LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLE 545
           LS GNALITMY RCG ++AA ++FLTMPY+D VSWNAMIAA  QHGHG +AI+LYE+ML+
Sbjct: 450 LSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLK 509

Query: 546 EHILPDRITFLTVLSACSHAGLVDEGK 626
           E ILPDRITFLT+LSACSHAGLV EG+
Sbjct: 510 EDILPDRITFLTILSACSHAGLVKEGR 536



 Score =  109 bits (272), Expect = 8e-22
 Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 37/244 (15%)
 Frame = +3

Query: 9   CGKINQARNIFDAACT--KDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMIS 182
           C  +  AR +FD A    +D  +W  +++ YV    +  A+ +   M +   ++W  MIS
Sbjct: 193 CVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMIS 252

Query: 183 GLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDS 362
           G    G  EEA  L  RM S G++  +Y ++  I++ +       GRQ+H  ++R     
Sbjct: 253 GYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQP 312

Query: 363 S----LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNA------------------ 476
           S    LS  NALIT+Y RCG L  A  +F  MP  D VSWNA                  
Sbjct: 313 SGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIF 372

Query: 477 -------------MIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVD 617
                        MI+   Q+G G E +KL+ +M  E + P    +   +++CS  G +D
Sbjct: 373 REMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLD 432

Query: 618 EGKK 629
            G++
Sbjct: 433 NGQQ 436



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 73/253 (28%), Positives = 110/253 (43%), Gaps = 45/253 (17%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFN--EMREKNILSWTVMI 179
           K   I  AR +FD     D+V+   MLSAY +AG I  A  +FN   M  ++ +S+  MI
Sbjct: 48  KSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMI 107

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALE-QGRQLHGQLIRVGF 356
           +  +    G  AL+LF +MK  G  P  + FS  + + +++A  E   +QLH ++ + G 
Sbjct: 108 TAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGA 167

Query: 357 DSSLSAGNALITMYGRCGA----------------------------------------- 413
            S  S  NAL++ Y  C +                                         
Sbjct: 168 LSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRND 227

Query: 414 -LDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLS 590
            L AA  +   M     V+WNAMI+ +   G   EA  L   M    I  D  T+ +V+S
Sbjct: 228 DLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVIS 287

Query: 591 ACSHAGLVDEGKK 629
           A S+AGL + G++
Sbjct: 288 AASNAGLFNIGRQ 300


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479792|gb|AES60995.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  295 bits (756), Expect = 6e-78
 Identities = 135/207 (65%), Positives = 178/207 (85%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISG 185
           K  ++ +AR +FD    +D++SWNA+LS YV+A +I+EA +IF+EM E+N+L+WTVMISG
Sbjct: 338 KYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISG 397

Query: 186 LAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQLHGQLIRVGFDSS 365
           LAQ+G GEE LKLFN+MKS GLEPCDYAF+GAIT+C+VL +L+ G+Q+H Q+IR+G DS 
Sbjct: 398 LAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSG 457

Query: 366 LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLE 545
           LSAGNALITMY RCG +++A S+FLTMPY+D VSWNAMIAA  QHGHG +AI+L+E+M++
Sbjct: 458 LSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMK 517

Query: 546 EHILPDRITFLTVLSACSHAGLVDEGK 626
           E ILPDRITFLT+L+AC+HAGL+ EG+
Sbjct: 518 EDILPDRITFLTILTACNHAGLIKEGR 544



 Score =  103 bits (257), Expect = 4e-20
 Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
 Frame = +3

Query: 27  ARNIFDAACTKDLV--SWNAMLSAYVSAGKIDEAKAIFNEMREKNILSWTVMISGLAQHG 200
           AR +FD      +   SW  M++ YV    +  A+ + + +     ++W  MISG  + G
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262

Query: 201 SGEEALKLFNRMKSNGLEPCDYAFSGAITSCA----VLAALEQGRQLHGQLIRVGFDSS- 365
             EEA   F RM S G++  +Y ++  I++C      +     GRQ+HG ++R   + S 
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSH 322

Query: 366 ---LSAGNALITMYGRCGALDAAYSMFLTMPYLDPVSWNA-------------------- 476
              LS  NALIT Y +   +  A  +F  MP  D +SWNA                    
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSE 382

Query: 477 -----------MIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLSACSHAGLVDEG 623
                      MI+   Q+G G E +KL+ +M  E + P    F   ++ACS  G +D G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442

Query: 624 KK 629
           ++
Sbjct: 443 QQ 444



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 45/242 (18%)
 Frame = +3

Query: 6   KCGKINQARNIFDAACTKDLVSWNAMLSAYVSAGKIDEAKAIFN--EMREKNILSWTVMI 179
           K   I  AR +FD     D+V+   +LSAY S+G +  A+ +FN   +  ++ +S+  MI
Sbjct: 52  KSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMI 111

Query: 180 SGLAQHGSGEEALKLFNRMKSNGLEPCDYAFSGAITSCAVLAALEQGRQ-LHGQLIRVGF 356
           +  +    G  AL LF +MK  G  P  + FS  +++ +++A  E+  Q LH ++I++G 
Sbjct: 112 TAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGT 171

Query: 357 DSSLSAGNALITMYGRCGA----------------------------------------- 413
               S  NAL++ Y  C +                                         
Sbjct: 172 LLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRND 231

Query: 414 -LDAAYSMFLTMPYLDPVSWNAMIAAFGQHGHGAEAIKLYEEMLEEHILPDRITFLTVLS 590
            L AA  +   + Y   V+WNAMI+ + + G   EA   +  M    I  D  T+ +++S
Sbjct: 232 DLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLIS 291

Query: 591 AC 596
           AC
Sbjct: 292 AC 293