BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00032358
         (1067 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Mimulus...   391   e-106
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   387   e-105
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   386   e-105
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   384   e-104
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   381   e-103
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   374   e-101
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   374   e-101
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   368   2e-99
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]   368   3e-99
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   365   2e-98
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   364   4e-98
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   363   7e-98
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   362   1e-97
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   357   6e-96
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]        356   1e-95
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi...   356   1e-95
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   353   5e-95
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   352   2e-94
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   349   1e-93
ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mi...   349   1e-93

>gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Mimulus guttatus]
          Length = 562

 Score =  391 bits (1005), Expect = e-106
 Identities = 216/401 (53%), Positives = 261/401 (65%), Gaps = 53/401 (13%)
 Frame = +1

Query: 22   EELPDPKRQKMSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAK 201
            EELPDPKRQKMS++   D+EN + A TIPR PKYKRRK+AIFFAYCGVGYQGMQKNPGAK
Sbjct: 11   EELPDPKRQKMSSS-GDDEENRDGAETIPRKPKYKRRKIAIFFAYCGVGYQGMQKNPGAK 69

Query: 202  TIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVER 381
            TIEGD EEAL+L+GAIPEEERGLH++++WARSARTDKGVSAVGQVVSGRFYVDPPGF+ER
Sbjct: 70   TIEGDLEEALYLSGAIPEEERGLHKRYEWARSARTDKGVSAVGQVVSGRFYVDPPGFIER 129

Query: 382  LNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGN 561
            L+SHL+PQIR+FGYKR TPSFNAKKFCDRRRY                            
Sbjct: 130  LHSHLSPQIRIFGYKRVTPSFNAKKFCDRRRY---------------------------- 161

Query: 562  ELVKCVECSERGRKVFGVMGKR-----------------------------SFESKNVND 654
                C+ECSERGRKVFGVMGK+                             SFESK+V +
Sbjct: 162  ----CLECSERGRKVFGVMGKQRNFESKAPGEGENENVEVGSGISSNNGTGSFESKDVGE 217

Query: 655  SVETDSGISSNNGSKLEENEVVISSCADNETETNDSVKNSSIENGNVEAPKDEKLEQAKE 834
            +VE  SGI SNNGS   + +VV +S  +NE  +N S      EN ++ A +D+K+E  K 
Sbjct: 218  NVEVGSGILSNNGSPPTDEKVVANSLENNEIGSNGS------ENVSIGAAQDDKMEVDKA 271

Query: 835  V------------------SMGNFAEKGNDN------GSESKNLLENGAENVETMKEDIL 942
            V                  ++ + +EKG +N       SE++ LLE G E++E    D L
Sbjct: 272  VLVDSAILSDNVSVLDESKTVVDSSEKGIENTDLENGSSETEKLLETGDESIEKRNVDKL 331

Query: 943  ECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
            E ++A+  ++ EKKS+FCYGE EK R NRILK YEGTHNFH
Sbjct: 332  ESENANGHTEAEKKSEFCYGEEEKARFNRILKFYEGTHNFH 372


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  387 bits (994), Expect = e-105
 Identities = 203/348 (58%), Positives = 244/348 (70%), Gaps = 1/348 (0%)
 Frame = +1

Query: 25   ELPDPKRQKMS-TTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAK 201
            E PDPK+ KMS TTT SDDE+  + +  P+  +YKRRKVAIFFAYCGVGYQGMQKNPGAK
Sbjct: 19   EEPDPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKNPGAK 78

Query: 202  TIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVER 381
            TIE D EEAL+LAGA+PE++RGL +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+R
Sbjct: 79   TIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDR 138

Query: 382  LNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGN 561
            LNS+L+PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDP+CHRDRESV AS GS N
Sbjct: 139  LNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDN 198

Query: 562  ELVKCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCADN 741
            ELVKC+ECSERGRKV G+MGKR+FE K    +  T+S ISSN  + +E ++V  +   ++
Sbjct: 199  ELVKCLECSERGRKVEGLMGKRNFEVK----TAITESDISSNIVNAIEVSDVQANGVLED 254

Query: 742  ETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENVE 921
               T+DS K +S+   N         E   +      +  GND+              + 
Sbjct: 255  SATTSDSNKQTSVLVENTATELTVASEGIAKSESSEMSGLGNDS-------------EIV 301

Query: 922  TMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
              KE +          K +    F YGE EK R NRILK Y GTHNFH
Sbjct: 302  VSKESV--------NGKEKPSGSFKYGEEEKARFNRILKHYVGTHNFH 341


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus]
          Length = 519

 Score =  386 bits (991), Expect = e-105
 Identities = 205/348 (58%), Positives = 254/348 (72%), Gaps = 1/348 (0%)
 Frame = +1

Query: 25   ELPDPKRQKMS-TTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAK 201
            E P PK+ KMS TTT SDDE+  + +  P+  +YKRRKVAIFFAYCGVGYQGMQKNPGAK
Sbjct: 19   EEPQPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKNPGAK 78

Query: 202  TIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVER 381
            TIE D EEAL+LAGA+PE++RGL +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+R
Sbjct: 79   TIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDR 138

Query: 382  LNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGN 561
            LNS+L+PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDP+CHRDRESV AS GS N
Sbjct: 139  LNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDN 198

Query: 562  ELVKCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCADN 741
            ELVKC+ECSERGRKV G++GKR+FE K    +  T+S ISSN  + +E ++V  +   ++
Sbjct: 199  ELVKCLECSERGRKVEGLIGKRNFEVK----TAITESDISSNTVNAIEVSDVQANGVLED 254

Query: 742  ETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENVE 921
               T+DS K +S+   N           A E+++G+   +G    SES  +   G+++  
Sbjct: 255  SATTSDSNKQTSVLVENT----------ATELNVGS---EGTAK-SESSEMSGLGSDS-- 298

Query: 922  TMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
               E ++  +S +   K      F YGE EK R NRILK Y GTHNFH
Sbjct: 299  ---EIVVSKESVNGKEK--SSGSFKYGEEEKARFNRILKHYVGTHNFH 341


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  384 bits (986), Expect = e-104
 Identities = 204/348 (58%), Positives = 253/348 (72%), Gaps = 1/348 (0%)
 Frame = +1

Query: 25   ELPDPKRQKMS-TTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAK 201
            E P PK+ KMS TTT SDDE+  + +  P+  +YKRRKVA FFAYCGVGYQGMQKNPGAK
Sbjct: 19   EEPQPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAXFFAYCGVGYQGMQKNPGAK 78

Query: 202  TIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVER 381
            TIE D EEAL+LAGA+PE++RGL +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+R
Sbjct: 79   TIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDR 138

Query: 382  LNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGN 561
            LNS+L+PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDP+CHRDRESV AS GS N
Sbjct: 139  LNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDN 198

Query: 562  ELVKCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCADN 741
            ELVKC+ECSERGRKV G++GKR+FE K    +  T+S ISSN  + +E ++V  +   ++
Sbjct: 199  ELVKCLECSERGRKVEGLIGKRNFEVK----TAITESDISSNTVNAIEVSDVQANGVLED 254

Query: 742  ETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENVE 921
               T+DS K +S+   N           A E+++G+   +G    SES  +   G+++  
Sbjct: 255  SATTSDSNKQTSVLVENT----------ATELNVGS---EGTAK-SESSEMSGLGSDS-- 298

Query: 922  TMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
               E ++  +S +   K      F YGE EK R NRILK Y GTHNFH
Sbjct: 299  ---EIVVSKESVNGKEK--SSGSFKYGEEEKARFNRILKHYVGTHNFH 341


>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
            vinifera]
          Length = 503

 Score =  381 bits (978), Expect = e-103
 Identities = 202/347 (58%), Positives = 242/347 (69%), Gaps = 2/347 (0%)
 Frame = +1

Query: 31   PDPKRQKMSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIE 210
            PDPKR KMS TT + D+   +  T  + P+YKRRK+AIFFAYCGVGYQGMQKNPGAKTIE
Sbjct: 6    PDPKRPKMSQTTTTSDDEDCDTTTATKKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIE 65

Query: 211  GDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNS 390
            GD EEALF +GA+PE++RG  ++FDWARSARTDKGVSAVGQVVSGRFY+DPPG VERLNS
Sbjct: 66   GDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNS 125

Query: 391  HLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELV 570
            +L PQIR+FG+KR T SFNAKKFCDRRRYVYL+PVFALDPS H DRESV+AS GS NELV
Sbjct: 126  NLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESVLASVGSENELV 185

Query: 571  KCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCADNETE 750
            KC+ECSERGRKV G+MGKRSFESK   D  E   G S N         +V ++   +E +
Sbjct: 186  KCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKN---------IVGAAILKSEAK 236

Query: 751  TNDSVKNSSIENGN-VEAP-KDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENVET 924
                  + +  +GN +  P K+ +  Q  E S     E   D+ + ++N  E G  + E 
Sbjct: 237  EESMASSDNRHDGNSISQPIKEGRCFQDNETS-----ESTPDSRASAQN--EPGVSHSE- 288

Query: 925  MKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
                     S    +K+EK S FCYG+ E+ER NRIL  Y GTHNFH
Sbjct: 289  --------QSDKGENKLEKGSGFCYGDKERERFNRILGHYVGTHNFH 327


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 548

 Score =  374 bits (960), Expect = e-101
 Identities = 201/352 (57%), Positives = 244/352 (69%), Gaps = 5/352 (1%)
 Frame = +1

Query: 25   ELPDPKRQKMSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKT 204
            E P+PK+ KMSTTT+ D+E            +YKRRKVAIFFAYCGVGYQGMQKNPGAKT
Sbjct: 22   EEPEPKKLKMSTTTSDDEETGTKK-------RYKRRKVAIFFAYCGVGYQGMQKNPGAKT 74

Query: 205  IEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERL 384
            IEGD EEAL+++GA+PE++RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPG V+RL
Sbjct: 75   IEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRL 134

Query: 385  NSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNE 564
            NS+L  QIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDPSCHRDRE+VMAS GSGNE
Sbjct: 135  NSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNE 194

Query: 565  LVKCVECSERGRKVFGVMGKRSFESKNVN-DSVETDSGISSNNGSKLEENEVVISSCAD- 738
            LVKC+ECSERGRKV G++G R    +N+  ++V+ ++GISSN  S + E+  V  S  D 
Sbjct: 195  LVKCLECSERGRKVVGLVGNR---KQNLELEAVDVEAGISSNRDSGVTEDVEVSLSKGDD 251

Query: 739  ---NETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGA 909
               NE   ND+    + + G         LE    V      E+G     ES N      
Sbjct: 252  NHLNEESGNDNKGGMNCKTG---------LETVIPVQ-----EEGTPLNGESVN------ 291

Query: 910  ENVETMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
                    DILE +  +   K    S+FCYGE E+ER N+ILK + GTHNFH
Sbjct: 292  ------NSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFH 337


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  374 bits (959), Expect = e-101
 Identities = 200/363 (55%), Positives = 253/363 (69%), Gaps = 15/363 (4%)
 Frame = +1

Query: 22   EELPDPKRQKMSTTTASDDE----NPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKN 189
            +E P+ KR +MSTTT+ ++E     P + A   +  +YKRRK+AIFFAYCGVGYQGMQKN
Sbjct: 14   QEEPERKRPRMSTTTSDEEEIATTAPGDEAATVKKQRYKRRKMAIFFAYCGVGYQGMQKN 73

Query: 190  PGAKTIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPG 369
            PGAKTIEGD EEALF +GA+PE++RG  +++DWARSARTDKGVSAVGQV+SGRFYVDPPG
Sbjct: 74   PGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDWARSARTDKGVSAVGQVISGRFYVDPPG 133

Query: 370  FVERLNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASA 549
             V+RLNS L  QIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDPS HRDRESV+AS 
Sbjct: 134  LVDRLNSILPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHRDRESVLASL 193

Query: 550  GSGNELVKCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISS 729
            GSG+ELVKC+ECSERGRKV G +GKRSFESK  +++ +TD  I  N G  +   E+    
Sbjct: 194  GSGDELVKCLECSERGRKVIGAVGKRSFESK--SEAFQTD--ILLNGGCAIANCEIKEDI 249

Query: 730  CADNETETNDSVKNSSIENGNVEAPKDEKLEQA-KEVSMGNFAEKGN---DNGSE----S 885
                +      + +  +E  NV   +D + E A     + + +E GN   D+  E    S
Sbjct: 250  SMSMDNAHGVRMHSEFVEQTNVSHNEDSETESAMPRTDILSNSEDGNVKSDSKQEEVMVS 309

Query: 886  KNLLENGAENVETMKEDILEC---DSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTH 1056
            ++  + G +  ETM++D       +  +    + K S+FCYGE EKE+ NRILK Y G+H
Sbjct: 310  EDAADGGNKESETMEKDSKASVGEERVNGEEHVMKGSEFCYGEEEKEKFNRILKYYVGSH 369

Query: 1057 NFH 1065
            NFH
Sbjct: 370  NFH 372


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  368 bits (945), Expect = 2e-99
 Identities = 200/345 (57%), Positives = 229/345 (66%)
 Frame = +1

Query: 31   PDPKRQKMSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIE 210
            PDPKR KMSTTT SDDE   +A    +  +YKRRK+AIFFAYCGVGYQGMQKNPGAKTIE
Sbjct: 25   PDPKRLKMSTTTTSDDEETASATNGTKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIE 84

Query: 211  GDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNS 390
            GD EEALF +GA+PE++RG  +++DWARSARTDKGVSAVGQVVSGRFY+DPPG VERLN 
Sbjct: 85   GDLEEALFHSGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNR 144

Query: 391  HLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELV 570
             L  QIR+FGYKR T SFN+KKFCDRRRYVYL+PVFALDPSCHRDRESV+AS GSGNELV
Sbjct: 145  ILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDPSCHRDRESVLASLGSGNELV 204

Query: 571  KCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCADNETE 750
            KC+ECSERGRKV GVMGKRSFE+K    S    S +SSNNG   E   V+      N T 
Sbjct: 205  KCLECSERGRKVAGVMGKRSFEAK----STIVHSDVSSNNG---ESGNVIKE---HNLTS 254

Query: 751  TNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENVETMK 930
              + V +SS++N   E  K                                   NVE + 
Sbjct: 255  ELEEVTDSSVQNEFTEVDK----------------------------------VNVEKIP 280

Query: 931  EDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
             +               + +FCYGE EK   NRILK Y G+HNFH
Sbjct: 281  LE---------------ERRFCYGEEEKGLFNRILKHYVGSHNFH 310


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score =  368 bits (944), Expect = 3e-99
 Identities = 206/382 (53%), Positives = 255/382 (66%), Gaps = 46/382 (12%)
 Frame = +1

Query: 58   TTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEALFL 237
            TTT SDDE+ +   T  + P+YKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD EEALF 
Sbjct: 4    TTTTSDDEDCDTT-TATKKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFF 62

Query: 238  AGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAPQIRVF 417
            +GA+PE++RG  ++FDWARSARTDKGVSAVGQVVSGRFY+DPPG VERLNS+L PQIR+F
Sbjct: 63   SGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIF 122

Query: 418  GYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVECSERG 597
            G+KR T SFNAKKFCDRRRYVYL+PVFALDPS H DRESV+AS GS NELVKC+ECSERG
Sbjct: 123  GFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESVLASVGSENELVKCLECSERG 182

Query: 598  RKVFGVMGKRSFESK-NVND--SVETDS------GISSNNGSKLEENEV---VISSCADN 741
            RKV G+MGKRSFESK +V+D   VE +S      GI SN+ + +  +EV   + ++  +N
Sbjct: 183  RKVVGIMGKRSFESKVSVDDREDVEGESKNIVQLGIPSNDEAAIVNSEVQEEIKATSNNN 242

Query: 742  ETETNDSVK--------------NSSIENGNVEAPKDEKL------EQAKEVSMGNFAEK 861
              + N+S+               ++ I NG     +  K+       +AKE SM + ++ 
Sbjct: 243  NIDANNSISETIKEEAAKLSSEVDAEIINGENSISEPVKVGAAILKSEAKEESMAS-SDN 301

Query: 862  GNDNGSESKNLLENGAENVETMKEDILEC--------------DSASSPSKIEKKSQFCY 999
             +D  S S+ + E          E   +                S    +K+EK S FCY
Sbjct: 302  RHDGNSISQPIKEGRCFQDNETSESTPDSRASAQNEPGVSHSEQSDKGENKLEKGSGFCY 361

Query: 1000 GEAEKERLNRILKSYEGTHNFH 1065
            G+ E+ER NRIL  Y GTHNFH
Sbjct: 362  GDKERERFNRILGHYVGTHNFH 383


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Citrus
            sinensis]
          Length = 526

 Score =  365 bits (936), Expect = 2e-98
 Identities = 204/369 (55%), Positives = 248/369 (67%), Gaps = 19/369 (5%)
 Frame = +1

Query: 16   RQEELPDPKRQKMSTTTASDDENP-----ENAATIPRAPKYKRRKVAIFFAYCGVGYQGM 180
            RQE  PDPKR KMS TT SDDE         A +  +    KRRK+AIFFAYCGVGYQGM
Sbjct: 19   RQE--PDPKRLKMSATTTSDDERDLIPAAAGADSTTKRQLCKRRKIAIFFAYCGVGYQGM 76

Query: 181  QKNPGAKTIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVD 360
            QKNPGAKTIEGD EEALF +GA+ E +RG  R++DWARSARTDKGVSAVGQVVSGRF +D
Sbjct: 77   QKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAVGQVVSGRFCID 136

Query: 361  PPGFVERLNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVM 540
            PPG VERLN +L  QIR+FGYKR T SFNAKKFCD+RRYVYL+PVFALD S HRDRESVM
Sbjct: 137  PPGLVERLNYNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVM 196

Query: 541  ASAGSGNELVKCVECSERGRKVFGVMGKRSF--------ESKNVNDSVETDSGISSNNGS 696
            AS GSGNELVKC+ECSERGRKV GVMGKR++        E+ ++N  V+ D+ +S+ NG 
Sbjct: 197  ASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGD 256

Query: 697  K----LE--ENEVVISSCADNETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAE 858
            +    LE  E+   IS  A  E   ++SV  + +E+   E  ++E  + + ++       
Sbjct: 257  RHNTNLESVESNKTISESAMVENANSESVNETLVESRTSETVQNENTDLSLDL------- 309

Query: 859  KGNDNGSESKNLLENGAENVETMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILK 1038
               D+ ++SK + E  + N E                K+ K S FCYGE EK+R NRILK
Sbjct: 310  ---DSKNDSKVMAEERSVNGE---------------EKLLKGSGFCYGEEEKKRFNRILK 351

Query: 1039 SYEGTHNFH 1065
             Y G+HNFH
Sbjct: 352  HYVGSHNFH 360


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  364 bits (934), Expect = 4e-98
 Identities = 204/363 (56%), Positives = 249/363 (68%), Gaps = 13/363 (3%)
 Frame = +1

Query: 16   RQEELPDPKRQKMSTTTASDDENP-----ENAATIPRAPKYKRRKVAIFFAYCGVGYQGM 180
            RQE  PDPKR KMS T+ SDDE         A +  +    KRRK+AIFFAYCGVGYQGM
Sbjct: 19   RQE--PDPKRLKMSATSTSDDERDLIPAAAGADSTTKRQLCKRRKIAIFFAYCGVGYQGM 76

Query: 181  QKNPGAKTIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVD 360
            QKNPGAKTIEGD EEALF +GA+ E +RG  R++DWARSARTDKGVSAVGQVVSGRF +D
Sbjct: 77   QKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAVGQVVSGRFCID 136

Query: 361  PPGFVERLNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVM 540
            PPG VERLNS+L  QIR+FGYKR T SFNAKKFCD+RRYVYL+PVFALD S HRDRESVM
Sbjct: 137  PPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVM 196

Query: 541  ASAGSGNELVKCVECSERGRKVFGVMGKRSF--------ESKNVNDSVETDSGISSNNGS 696
            AS GSGNELVKC+ECSERGRKV GVMGKR++        E+ ++N  V+ D+ +S+ NG 
Sbjct: 197  ASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGD 256

Query: 697  KLEENEVVISSCADNETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNG 876
            +   N   + S   N+T  ++SV    +EN N E+  +  +E     ++       N+N 
Sbjct: 257  RHNTN---LESVESNKT-ISESV---MVENANSESVNETLVESRTSETV------QNENT 303

Query: 877  SESKNLLENGAENVETMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTH 1056
              S +L  +   + + M E+     S +   K+ K S FCYGE EK+R NRILK Y G+H
Sbjct: 304  DLSLDL--DSKNDSKVMAEE----RSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSH 357

Query: 1057 NFH 1065
            NFH
Sbjct: 358  NFH 360


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  363 bits (932), Expect = 7e-98
 Identities = 196/343 (57%), Positives = 237/343 (69%), Gaps = 5/343 (1%)
 Frame = +1

Query: 52   MSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEAL 231
            MSTTT+ D+E            +YKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGD EEAL
Sbjct: 1    MSTTTSDDEETGTKK-------RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL 53

Query: 232  FLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAPQIR 411
            +++GA+PE++RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPG V+RLNS+L  QIR
Sbjct: 54   YVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIR 113

Query: 412  VFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVECSE 591
            +FGYKR T SFNAKKFCDRRRYVYL+PVFALDPSCHRDRE+VMAS GSGNELVKC+ECSE
Sbjct: 114  IFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSE 173

Query: 592  RGRKVFGVMGKRSFESKNVN-DSVETDSGISSNNGSKLEENEVVISSCAD----NETETN 756
            RGRKV G++G R    +N+  ++V+ ++GISSN  S + E+  V  S  D    NE   N
Sbjct: 174  RGRKVVGLVGNR---KQNLELEAVDVEAGISSNRDSGVTEDVEVSLSKGDDNHLNEESGN 230

Query: 757  DSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENVETMKED 936
            D+    + + G         LE    V      E+G     ES N              D
Sbjct: 231  DNKGGMNCKTG---------LETVIPVQ-----EEGTPLNGESVN------------NSD 264

Query: 937  ILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
            ILE +  +   K    S+FCYGE E+ER N+ILK + GTHNFH
Sbjct: 265  ILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFH 307


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  362 bits (930), Expect = 1e-97
 Identities = 197/349 (56%), Positives = 246/349 (70%), Gaps = 2/349 (0%)
 Frame = +1

Query: 25   ELPDPKRQKMSTTTASDDENPENAATIPRAPK-YKRRKVAIFFAYCGVGYQGMQKNPGAK 201
            E P+PK+ KMSTT  SDDE      T P A K YKRRK+AIFFAYCGVGYQGMQKNPGAK
Sbjct: 22   EEPEPKKLKMSTT--SDDEE---CTTAPGAKKRYKRRKIAIFFAYCGVGYQGMQKNPGAK 76

Query: 202  TIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVER 381
            TIEGD EEAL+++GA+PE +RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPG V+R
Sbjct: 77   TIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDR 136

Query: 382  LNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGN 561
            LNS+L  QIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDP CHRDRE+VMAS GS N
Sbjct: 137  LNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMASLGSTN 196

Query: 562  ELVKCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCADN 741
            ELVKC+ECSERGRKV G++G R    +   ++++ ++GISSN        +VV+ S    
Sbjct: 197  ELVKCLECSERGRKVVGLVGNRKHNLE--LEAMDVEAGISSN-------TDVVLDSVVTG 247

Query: 742  ETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKN-LLENGAENV 918
            + E + S  + +  NG  E+  D K    K +  G   + G + G   ++ ++    E+V
Sbjct: 248  DVEASLSKGDDNHLNG--ESGIDNK---GKVLVDGTNLKTGIEKGIPVQDEVMPLNGESV 302

Query: 919  ETMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
                 DI+E +  +   K    S FCYGE E+ER N+IL  + GTHNFH
Sbjct: 303  N--NSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFH 349


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Cicer arietinum]
          Length = 505

 Score =  357 bits (915), Expect = 6e-96
 Identities = 193/349 (55%), Positives = 238/349 (68%), Gaps = 2/349 (0%)
 Frame = +1

Query: 25   ELPDPKRQKMSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKT 204
            E P  K+ KMSTTT+ D+E    A T  R   YKRRKVAI FAYCGVGYQGMQKNPGAKT
Sbjct: 22   EEPQTKKAKMSTTTSDDEECTAAAGTKVR---YKRRKVAILFAYCGVGYQGMQKNPGAKT 78

Query: 205  IEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERL 384
            IEG+ EEAL+++GA+PE++RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+RL
Sbjct: 79   IEGEIEEALYVSGAVPEQDRGMSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRL 138

Query: 385  NSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNE 564
            NS+L  QIR+FGYKR T SF+AKKFCDRRRYVYL+PVFALDP CHRDRE+V+AS GS NE
Sbjct: 139  NSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENE 198

Query: 565  LVKCVECSERGRKVFGVMG--KRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCAD 738
            LVKC+ECSERGRKV G++G  KR+ E + + D   TD G         ++N         
Sbjct: 199  LVKCLECSERGRKVEGLVGNSKRNLELEAM-DVETTDKG---------DDNR-------S 241

Query: 739  NETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENV 918
            N+   ND+    S+E+ N +   +  +    EVS                  L  G+EN 
Sbjct: 242  NKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSP-----------------LNGGSEN- 283

Query: 919  ETMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
                  +LE +  +      K+S+FCYGE E+ER N+ILKSY GTHNFH
Sbjct: 284  ---NSAVLEEEKVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFH 329


>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 621

 Score =  356 bits (913), Expect = 1e-95
 Identities = 212/431 (49%), Positives = 258/431 (59%), Gaps = 84/431 (19%)
 Frame = +1

Query: 25   ELPDPKRQKMSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKT 204
            E PD K+ KMST+T SDDE  E      +  +YKRRK+AIFFAYCGVGYQGMQKNPGAKT
Sbjct: 21   EEPDAKKLKMSTSTTSDDE--EMTTGNAKKERYKRRKIAIFFAYCGVGYQGMQKNPGAKT 78

Query: 205  IEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERL 384
            IEGD EEAL+L+GA+PE++R   +++DWARSARTDKGVSAVGQVVSGRFY+DPPG VERL
Sbjct: 79   IEGDLEEALYLSGAVPEQDRYCPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERL 138

Query: 385  NSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNE 564
            NS L+PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDPS H +RESV+AS GS +E
Sbjct: 139  NSKLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPNRESVLASLGSESE 198

Query: 565  LVKCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSN----NGSKLEENEVVISSC 732
            LVKCVECSERGRKV G+MGKRS+E    +     DSGIS N        +  +E V++S 
Sbjct: 199  LVKCVECSERGRKVPGLMGKRSYELTGAS----FDSGISLNICDAKVDSVVSDENVVASI 254

Query: 733  AD--------NETETNDS------------VKNSSIENGNVEAPK------------DEK 816
             D         ++ETN +             K  S+ENG+ E  +            D K
Sbjct: 255  NDIGEVKVENGDSETNHASFDSGISSNICDAKVDSVENGDSETNRASFDLGISSNICDAK 314

Query: 817  L-----EQAKEVSMGNFAEKGNDNGSESKNLL---------------------ENGAENV 918
            +     E+ +  S+    E   +NG    N                       ENG  +V
Sbjct: 315  VDSVVTEENRVASVNGVGEVKVENGDSETNRASFNSGISSNICDTKVVSVVRDENGVASV 374

Query: 919  --------------------ETMKEDIL--ECDSASSPSKIEKKSQFCYGEAEKERLNRI 1032
                                 T+  ++   E  + +   K EK+S F YGE E+ER NRI
Sbjct: 375  NGDGEVKVENGDSETNQVEGRTLDNEVSTGEEGNVNGEQKPEKRSDFSYGEKERERFNRI 434

Query: 1033 LKSYEGTHNFH 1065
            LK YEGTHNFH
Sbjct: 435  LKHYEGTHNFH 445


>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  356 bits (913), Expect = 1e-95
 Identities = 194/349 (55%), Positives = 232/349 (66%), Gaps = 1/349 (0%)
 Frame = +1

Query: 22   EELPDPKRQKMSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAK 201
            ++ PDPK+ KMSTTT  D    E  A   +  + KRRKVAIFFAYCGVGYQGMQKNPGAK
Sbjct: 19   QQQPDPKKLKMSTTTTDD----EQTAATTQKQRLKRRKVAIFFAYCGVGYQGMQKNPGAK 74

Query: 202  TIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVER 381
            TIEGD EEAL+L+GA+PE++R   +++DWARSARTDKGVSAVGQVVSGRFYVDPPGFV+R
Sbjct: 75   TIEGDLEEALYLSGAVPEQDRSNPKRYDWARSARTDKGVSAVGQVVSGRFYVDPPGFVDR 134

Query: 382  LNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGN 561
            LNSHL+PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFALDPS HRDRESV AS GS  
Sbjct: 135  LNSHLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSAHRDRESVKASLGSDE 194

Query: 562  ELVKCVECSERGRKVFGVMGKRSFESKNVND-SVETDSGISSNNGSKLEENEVVISSCAD 738
            E VKC+ECS+RGRKV G+MGKR+++ +  N  + E+ + IS+N+  K+           D
Sbjct: 195  EFVKCLECSDRGRKVGGLMGKRTYQLRGGNSYNSESVTEISTNDDMKI-----------D 243

Query: 739  NETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENV 918
            N+ E  D+V       GN +      +  A+EV           NG E K +  +G    
Sbjct: 244  NDIEGEDNV-----VVGNAD------MNSAEEV-----------NGGEKKAVEGSG---- 277

Query: 919  ETMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
                                    FCYGE EKER NRIL  Y+GTHNFH
Sbjct: 278  ------------------------FCYGEKEKERFNRILSCYQGTHNFH 302


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            gi|550339814|gb|EEE94755.2| hypothetical protein
            POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  353 bits (907), Expect = 5e-95
 Identities = 200/354 (56%), Positives = 236/354 (66%), Gaps = 4/354 (1%)
 Frame = +1

Query: 16   RQEELPDPKRQKMSTTTASDDE----NPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQ 183
            RQ+E PD KR KMSTTT+ D++     P +  TI +  +YKRRK+AIF  YCGVGYQGMQ
Sbjct: 14   RQQE-PDLKRPKMSTTTSEDEDAATTTPGDDTTIKKQ-RYKRRKIAIFLTYCGVGYQGMQ 71

Query: 184  KNPGAKTIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDP 363
            KNPGAKTIEGD EEALF AGA+PE +RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 72   KNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 131

Query: 364  PGFVERLNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMA 543
            PG VERL+S+L+PQIR+FGYKR T SFNAKKFCDRRRYVYL+PVFAL+P  HRDRESV+A
Sbjct: 132  PGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRDRESVLA 191

Query: 544  SAGSGNELVKCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVI 723
            S GSG+ELVKC++CSERGRKV G +GKRSFESK+     E  S           + EV I
Sbjct: 192  SLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWSNDKDTTLKSEIKEEVSI 251

Query: 724  SSCADNETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLEN 903
            SS             NS   N N E  KDE +     VS+    E G+D  ++S+     
Sbjct: 252  SS-------------NSEDANANPEI-KDEIM-----VSI----ENGDDKNTKSE----- 283

Query: 904  GAENVETMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
                                  +  K S FCYGE EKER NRIL  Y G+HNFH
Sbjct: 284  ---------------------EEAIKGSGFCYGEKEKERFNRILNYYLGSHNFH 316


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028255|gb|ESW26895.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  352 bits (902), Expect = 2e-94
 Identities = 189/337 (56%), Positives = 237/337 (70%), Gaps = 2/337 (0%)
 Frame = +1

Query: 61   TTASDDENPENAATIPRAPK-YKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEALFL 237
            +T SDDE      T P A K YKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGD EEAL++
Sbjct: 2    STTSDDEE---CTTAPGAKKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYV 58

Query: 238  AGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAPQIRVF 417
            +GA+PE +RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPG V+RLNS+L  QIR+F
Sbjct: 59   SGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIF 118

Query: 418  GYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVECSERG 597
            GYKR T SFNAKKFCDRRRYVYL+PVFALDP CHRDRE+VMAS GS NELVKC+ECSERG
Sbjct: 119  GYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERG 178

Query: 598  RKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCADNETETNDSVKNSS 777
            RKV G++G R    +   ++++ ++GISSN        +VV+ S    + E + S  + +
Sbjct: 179  RKVVGLVGNRKHNLE--LEAMDVEAGISSN-------TDVVLDSVVTGDVEASLSKGDDN 229

Query: 778  IENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKN-LLENGAENVETMKEDILECDS 954
              NG  E+  D K    K +  G   + G + G   ++ ++    E+V     DI+E + 
Sbjct: 230  HLNG--ESGIDNK---GKVLVDGTNLKTGIEKGIPVQDEVMPLNGESVN--NSDIIEEEK 282

Query: 955  ASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
             +   K    S FCYGE E+ER N+IL  + GTHNFH
Sbjct: 283  MNGEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFH 319


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Cicer arietinum]
          Length = 475

 Score =  349 bits (896), Expect = 1e-93
 Identities = 189/340 (55%), Positives = 233/340 (68%), Gaps = 2/340 (0%)
 Frame = +1

Query: 52   MSTTTASDDENPENAATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEAL 231
            MSTTT+ D+E    A T  R   YKRRKVAI FAYCGVGYQGMQKNPGAKTIEG+ EEAL
Sbjct: 1    MSTTTSDDEECTAAAGTKVR---YKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEAL 57

Query: 232  FLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVERLNSHLAPQIR 411
            +++GA+PE++RG+ +++DWARSARTDKGVSAVGQVVSGRFY+DPPGFV+RLNS+L  QIR
Sbjct: 58   YVSGAVPEQDRGMSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIR 117

Query: 412  VFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGSGNELVKCVECSE 591
            +FGYKR T SF+AKKFCDRRRYVYL+PVFALDP CHRDRE+V+AS GS NELVKC+ECSE
Sbjct: 118  IFGYKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLECSE 177

Query: 592  RGRKVFGVMG--KRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCADNETETNDSV 765
            RGRKV G++G  KR+ E + + D   TD G         ++N         N+   ND+ 
Sbjct: 178  RGRKVEGLVGNSKRNLELEAM-DVETTDKG---------DDNR-------SNKESINDNE 220

Query: 766  KNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAENVETMKEDILE 945
               S+E+ N +   +  +    EVS                  L  G+EN       +LE
Sbjct: 221  GKVSVEDVNSKTSFETVVSGQDEVSP-----------------LNGGSEN----NSAVLE 259

Query: 946  CDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
             +  +      K+S+FCYGE E+ER N+ILKSY GTHNFH
Sbjct: 260  EEKVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFH 299


>ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Solanum
            lycopersicum]
          Length = 598

 Score =  349 bits (895), Expect = 1e-93
 Identities = 188/350 (53%), Positives = 230/350 (65%), Gaps = 3/350 (0%)
 Frame = +1

Query: 25   ELPDPKRQKMSTTTASDDENPENA---ATIPRAPKYKRRKVAIFFAYCGVGYQGMQKNPG 195
            E P PK+QKMSTTT SD+E    A   +   R P+YKRRKVAIFFAYCGVGYQGMQKNPG
Sbjct: 12   EEPQPKKQKMSTTTTSDEEYAAGAGDGSAPERKPRYKRRKVAIFFAYCGVGYQGMQKNPG 71

Query: 196  AKTIEGDFEEALFLAGAIPEEERGLHRKFDWARSARTDKGVSAVGQVVSGRFYVDPPGFV 375
            AKTIEGD EEAL+ AG +P+ ++   RK++WARSARTDKGVSAVGQVVSGRFYVDPPGF+
Sbjct: 72   AKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAVGQVVSGRFYVDPPGFI 131

Query: 376  ERLNSHLAPQIRVFGYKRATPSFNAKKFCDRRRYVYLVPVFALDPSCHRDRESVMASAGS 555
            +RLNS L PQIR+FG+KR T +F+AKKFCD+RRYVYLVPVFALDP  HRDRESV+AS GS
Sbjct: 132  DRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDPYAHRDRESVLASLGS 191

Query: 556  GNELVKCVECSERGRKVFGVMGKRSFESKNVNDSVETDSGISSNNGSKLEENEVVISSCA 735
            G ELVKC+ C ERGRKV GVMG+R F+    +  +     +++N                
Sbjct: 192  GKELVKCLNCPERGRKVAGVMGRRVFDPITQSVIIVDAPVVTAN---------------- 235

Query: 736  DNETETNDSVKNSSIENGNVEAPKDEKLEQAKEVSMGNFAEKGNDNGSESKNLLENGAEN 915
            D  T+TN  ++N        EA   EK+E+  +V      E+ ++N  + + +       
Sbjct: 236  DPTTDTNMIIEN--------EASLSEKVEERIDV-----VERSDENAKKEEQV------- 275

Query: 916  VETMKEDILECDSASSPSKIEKKSQFCYGEAEKERLNRILKSYEGTHNFH 1065
                                 ++S FCYGE EKER NRILK +EGTHNFH
Sbjct: 276  ---------------------EESVFCYGEKEKERFNRILKYFEGTHNFH 304