BLASTX nr result

ID: Mentha28_contig00032036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00032036
         (1055 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006382667.1| hypothetical protein POPTR_0005s042902g, par...    64   1e-07

>ref|XP_006382667.1| hypothetical protein POPTR_0005s042902g, partial [Populus
            trichocarpa] gi|550338032|gb|ERP60464.1| hypothetical
            protein POPTR_0005s042902g, partial [Populus trichocarpa]
          Length = 806

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 58/197 (29%), Positives = 78/197 (39%), Gaps = 8/197 (4%)
 Frame = -2

Query: 1045 NIFRFPVEXXXXXXXXXXXXXNCVYCQTIESGVISSLVLLEELYTLGSFSDWELVKEGGT 866
            NI R P E             NC   + I   V+SSL  LEELY   SF  WE       
Sbjct: 578  NIVRLPREIGKLTRLLLLDLSNCERLEVISPNVLSSLTRLEELYMGNSFVKWETEGPSSQ 637

Query: 865  GVNASINELTSLSNLIAFQIQTRD----PKVLWDXXXXXXXXXXXXXXIPGQIICRHEES 698
              NA ++EL  LSNLI   +Q  D    PK L+                    +C  +  
Sbjct: 638  RNNACLSELKLLSNLITLHMQVTDADNMPKDLF--------------------LCFQKLE 677

Query: 697  LSVRFPAVDYPWKFGEA---ALSLDLPDFTSLRDWMPALLRCAEILVLSG-DGSKSAMDE 530
                F    + W   +A    L L L     L +W+  LL+  E L L   +G KS +++
Sbjct: 678  RFRIFIGNGWDWSVEDATSRTLKLKLYTVIHLEEWVKTLLKITEELHLQELNGVKSILND 737

Query: 529  LTPDGLKFLRQLHIIKC 479
            L  +G   L+ LH+  C
Sbjct: 738  LDGEGFPQLKHLHVQNC 754


Top