BLASTX nr result

ID: Mentha28_contig00031884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00031884
         (495 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015750.1| F-box and associated interaction domains-con...    50   4e-10

>ref|XP_007015750.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|590586605|ref|XP_007015751.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|508786113|gb|EOY33369.1| F-box
           and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508786114|gb|EOY33370.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 387

 Score = 50.4 bits (119), Expect(2) = 4e-10
 Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = +1

Query: 277 GSWTRE-SVFHTYGIWRLVSFSENGELLYFASFDDELLLFDRTTGKLKHLGIYLWSDGVK 453
           GSWTR+ S+    G+ R + F +NGEL +  S + EL+LFD  T +LK+LGI+ + + ++
Sbjct: 296 GSWTRQFSIESVSGVERPLGFWKNGEL-FLESSNHELVLFDPATRELKNLGIHAYQNTMQ 354

Query: 454 LVPFLGSSVRLS 489
           L+ ++ S V ++
Sbjct: 355 LIAYVESLVPIN 366



 Score = 39.3 bits (90), Expect(2) = 4e-10
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
 Frame = +2

Query: 50  INGAFYTVVTASGESDRVILSFDFSTETLSTLRLPSYDS--RPTFTRLIEYRGLFSVLLG 223
           +NG++Y    A+G SD +ILSFD + E  STL LP++       + +L+++ G    ++ 
Sbjct: 223 VNGSYYW--QATGNSDYLILSFDMANEKFSTLPLPTFGGSLAQYYLQLLDFNGSLGAIVY 280

Query: 224 -----------WVAESGTWKHKF 259
                      WV  +G+W  +F
Sbjct: 281 PREGTEKSIDLWVM-NGSWTRQF 302


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