BLASTX nr result

ID: Mentha28_contig00030893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00030893
         (338 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004252984.1| PREDICTED: protein RALF-like 33-like isoform...    57   3e-06
ref|XP_004252983.1| PREDICTED: protein RALF-like 33-like isoform...    57   3e-06
ref|XP_006349913.1| PREDICTED: protein RALF-like 33-like [Solanu...    56   6e-06

>ref|XP_004252984.1| PREDICTED: protein RALF-like 33-like isoform 2 [Solanum
           lycopersicum]
          Length = 147

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = -3

Query: 210 KMPKPQLH--SLCTLFFMC-FLLGSVRVCEGAPVLDLNSSNSDELDAMAKRACVGKIGEC 40
           KM K QL+   L TLFF+  F    +R C G  VLDL S      + M KR C  K+ EC
Sbjct: 17  KMQKSQLYFNPLKTLFFLLLFSHAQMRFCSGVSVLDLKSVKDSNFNLMGKRGCSEKLQEC 76

Query: 39  TTAAEEEELMDSE 1
           +   +EE++MDSE
Sbjct: 77  SEMVDEEDMMDSE 89


>ref|XP_004252983.1| PREDICTED: protein RALF-like 33-like isoform 1 [Solanum
           lycopersicum]
          Length = 152

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = -3

Query: 210 KMPKPQLH--SLCTLFFMC-FLLGSVRVCEGAPVLDLNSSNSDELDAMAKRACVGKIGEC 40
           KM K QL+   L TLFF+  F    +R C G  VLDL S      + M KR C  K+ EC
Sbjct: 17  KMQKSQLYFNPLKTLFFLLLFSHAQMRFCSGVSVLDLKSVKDSNFNLMGKRGCSEKLQEC 76

Query: 39  TTAAEEEELMDSE 1
           +   +EE++MDSE
Sbjct: 77  SEMVDEEDMMDSE 89


>ref|XP_006349913.1| PREDICTED: protein RALF-like 33-like [Solanum tuberosum]
          Length = 152

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
 Frame = -3

Query: 210 KMPKPQLH--SLCTLFFMC-FLLGSVRVCEGAPVLDLNSSNSDELDAMAKRACVGKIGEC 40
           KM K QL+   L TLFF+  F    +R C G  VLDL S      + M KR C  K+ EC
Sbjct: 17  KMQKSQLYFNPLKTLFFLLLFSHAQMRFCSGVSVLDLKSVKDSNFNLMGKRGCSEKLQEC 76

Query: 39  TTAAEEEELMDSE 1
           +    EE+LMDSE
Sbjct: 77  SEMVGEEDLMDSE 89


Top