BLASTX nr result
ID: Mentha28_contig00030709
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha28_contig00030709 (384 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 61 2e-07 >gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa] Length = 1747 Score = 60.8 bits (146), Expect = 2e-07 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 5/131 (3%) Frame = -1 Query: 384 VRNWENKTIVALAQPTQMMATILLGELRAITCGIGLCVEKMIAPVEVFTNSLLAIHIIAE 205 +R+ IVA + Q + L+ EL AI G+ L VE+ + + V ++ L AIH++ Sbjct: 1519 IRDEFGSLIVAGGKNFQHPVSSLVAELLAIKVGLDLVVERRLRNIMVESDCLEAIHLL-- 1576 Query: 204 QDSTKNLLC--GGLLTTI---VAAKNNSVLSINHMRREANGVAHELARFARTLDSQMVWT 40 +S + L GGL+ I +A N S SI H+RRE N AH +A+F + + VW Sbjct: 1577 -NSKERCLAPEGGLVEDIQNTMALVNIS--SIYHVRREGNTAAHAIAKFVARNNGRYVWL 1633 Query: 39 DNWPSWLTNVV 7 ++ P WL +++ Sbjct: 1634 EDGPDWLMSLI 1644