BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00030709
         (384 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    61   2e-07

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
 Frame = -1

Query: 384  VRNWENKTIVALAQPTQMMATILLGELRAITCGIGLCVEKMIAPVEVFTNSLLAIHIIAE 205
            +R+     IVA  +  Q   + L+ EL AI  G+ L VE+ +  + V ++ L AIH++  
Sbjct: 1519 IRDEFGSLIVAGGKNFQHPVSSLVAELLAIKVGLDLVVERRLRNIMVESDCLEAIHLL-- 1576

Query: 204  QDSTKNLLC--GGLLTTI---VAAKNNSVLSINHMRREANGVAHELARFARTLDSQMVWT 40
             +S +  L   GGL+  I   +A  N S  SI H+RRE N  AH +A+F    + + VW 
Sbjct: 1577 -NSKERCLAPEGGLVEDIQNTMALVNIS--SIYHVRREGNTAAHAIAKFVARNNGRYVWL 1633

Query: 39   DNWPSWLTNVV 7
            ++ P WL +++
Sbjct: 1634 EDGPDWLMSLI 1644