BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00029888
         (448 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   206   2e-51
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   203   2e-50
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   202   5e-50
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]   199   3e-49
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]   197   2e-48
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   183   2e-44
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               182   4e-44
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     180   2e-43
gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group...   179   5e-43
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   178   6e-43
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   178   6e-43
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   178   6e-43
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...   178   6e-43
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...   178   6e-43
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   178   6e-43
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   178   6e-43
gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]     177   1e-42
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group...   177   1e-42
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc...   177   1e-42
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc...   177   1e-42

>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  206 bits (525), Expect = 2e-51
 Identities = 91/147 (61%), Positives = 124/147 (84%)
 Frame = +3

Query: 6    IVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTNC 185
            ++LSQSHY +K+L KF+   S  A+TP+++ +HLSKN+GESV+Q +Y+R+IG LMYL +C
Sbjct: 1009 LILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSC 1068

Query: 186  TRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANWI 365
            TRPDIA AV+KLSRYTSNP  +HW+ ++RVL+YL++T+ +GLH+ RYP VLEGY DANWI
Sbjct: 1069 TRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWI 1128

Query: 366  SDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            S+ K+S S SGYVFT+GG AV+W+S+K
Sbjct: 1129 SNVKDSKSHSGYVFTLGGAAVSWKSSK 1155


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  203 bits (517), Expect = 2e-50
 Identities = 90/147 (61%), Positives = 122/147 (82%)
 Frame = +3

Query: 6    IVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTNC 185
            ++LSQSHY +K+L KF+   S  A+TP+++ +HLSKN+GESV+Q +Y+R+IG LMYL +C
Sbjct: 1048 LILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSC 1107

Query: 186  TRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANWI 365
            TRPDIA AV KLSRYTSNP  +HW+ ++RVL+YL++T+ + LH+ RYP VLEGY DANWI
Sbjct: 1108 TRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVLEGYSDANWI 1167

Query: 366  SDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            S+ K+S S SGYVFT+GG AV+W+S+K
Sbjct: 1168 SNVKDSKSHSGYVFTLGGAAVSWKSSK 1194


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  202 bits (513), Expect = 5e-50
 Identities = 90/145 (62%), Positives = 121/145 (83%)
 Frame = +3

Query: 6    IVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTNC 185
            ++LSQSHY +K+L KF+   S  A+TP+++ +HLS N+GESV+Q +Y+RVIG LMYL +C
Sbjct: 802  LILSQSHYVDKILGKFDKDNSGVARTPMDVTLHLSNNKGESVSQVEYSRVIGSLMYLMSC 861

Query: 186  TRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANWI 365
            TRPDIA AV+KLSRYTSNP  +HW+ ++RVL+YL++T+ +GLH+ RYP VLEGY DANWI
Sbjct: 862  TRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWI 921

Query: 366  SDTKNSLSTSGYVFTIGGGAVTWRS 440
            S+ K+S S SGYVFT+GG AV+W+S
Sbjct: 922  SNVKDSKSHSGYVFTLGGAAVSWKS 946


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score =  199 bits (506), Expect = 3e-49
 Identities = 89/148 (60%), Positives = 120/148 (81%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            G++LSQ HY EK+LK+FN ++  P KTP++LN+H +KN G ++ Q +Y+R+IG LMY+ N
Sbjct: 671  GLILSQCHYIEKILKRFNQYDDSPIKTPVDLNLHSTKNNGPAIDQLEYSRIIGSLMYVMN 730

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
            C   DIA AVNKLSR+T+N  K+HW+ LVRVLRYL+YT ++GLH+LRYP +LEGY DANW
Sbjct: 731  CMCLDIAYAVNKLSRFTNNMGKDHWKVLVRVLRYLRYTLNYGLHYLRYPTLLEGYSDANW 790

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            I D K+S STSGY+FTIGG A++ +S+K
Sbjct: 791  IFDMKDSKSTSGYIFTIGGVAISRKSSK 818


>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
          Length = 313

 Score =  197 bits (500), Expect = 2e-48
 Identities = 88/147 (59%), Positives = 120/147 (81%)
 Frame = +3

Query: 6   IVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTNC 185
           ++LSQSHY +K+L KF+   S  A+TP+++ + LSKN+ ESV+Q +Y+RVIG LMYL +C
Sbjct: 45  LILSQSHYVDKILGKFDKDNSGVARTPVDVTLXLSKNKXESVSQVEYSRVIGSLMYLMSC 104

Query: 186 TRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANWI 365
           TRPDIA A +KLSRYTSNP  +HW+ ++RVL+YL++T+ +GLH+ RYP VLEGY DANWI
Sbjct: 105 TRPDIAYAXSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWI 164

Query: 366 SDTKNSLSTSGYVFTIGGGAVTWRSTK 446
           S+ K+S S SGYVFT+GG A +W+S+K
Sbjct: 165 SNVKDSKSHSGYVFTLGGAAXSWKSSK 191


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  183 bits (465), Expect = 2e-44
 Identities = 82/134 (61%), Positives = 109/134 (81%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            G++LSQ HY EK+L+KF  ++  P KTP+++N+HL KN G   +Q +Y+ +IG LMY+ N
Sbjct: 1046 GLILSQPHYIEKILEKFKKYDIRPKKTPMDVNLHLFKNTGIGKSQLEYSHIIGSLMYVMN 1105

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
            CTR DIA +V+KLSR+TSNP + HW++++RVL YLKYTQ++GLHF RYP VLEGY DANW
Sbjct: 1106 CTRLDIAYSVSKLSRFTSNPGENHWKSIIRVLGYLKYTQNYGLHFTRYPAVLEGYSDANW 1165

Query: 363  ISDTKNSLSTSGYV 404
            ISD+K+S STSGYV
Sbjct: 1166 ISDSKDSKSTSGYV 1179


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  182 bits (462), Expect = 4e-44
 Identities = 83/148 (56%), Positives = 111/148 (75%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            G+ LSQSHY EK+L KF        K PI+L+    KN GES +Q +YARV+G LMY+ N
Sbjct: 993  GLALSQSHYIEKILDKFKYLNFNVVKIPIDLSCTFQKNVGESDSQLEYARVLGSLMYIMN 1052

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
            CTRPDI+CA++KLSR+TSNP++ HW A+  VL YLK++Q + LH+ +YP ++EGY DANW
Sbjct: 1053 CTRPDISCAISKLSRFTSNPNQTHWMAMKHVLGYLKHSQHYALHYNKYPAMIEGYSDANW 1112

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            I+ +    STSGYVFT+G GAV+W+S+K
Sbjct: 1113 ITGSNEVKSTSGYVFTLGRGAVSWKSSK 1140


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  180 bits (457), Expect = 2e-43
 Identities = 86/148 (58%), Positives = 110/148 (74%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+ RYP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|50878407|gb|AAT85181.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1297

 Score =  179 bits (453), Expect = 5e-43
 Identities = 85/148 (57%), Positives = 110/148 (74%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  + +Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLHKNKRIARSQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYTGYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1034 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLAS 1093

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1094 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1153

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1154 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1181


>gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1109

 Score =  177 bits (450), Expect = 1e-42
 Identities = 85/147 (57%), Positives = 108/147 (73%)
 Frame = +3

Query: 6    IVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTNC 185
            I L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL + 
Sbjct: 842  ITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASA 901

Query: 186  TRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANWI 365
            TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+ RYP VLEGY D+NWI
Sbjct: 902  TRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYSRYPAVLEGYSDSNWI 961

Query: 366  SDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            SD     +TSGYVFT+GGGAV WRS K
Sbjct: 962  SDVDEIKATSGYVFTLGGGAVLWRSCK 988


>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711758|gb|ABF99553.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1224

 Score =  177 bits (450), Expect = 1e-42
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 956  GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLHKNKRIARNQLEYSQIIGSLMYLAS 1015

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1016 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1075

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1076 ISDVDKIKATSGYVFTLGGGAVSWRSCK 1103


>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1468

 Score =  177 bits (450), Expect = 1e-42
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3    GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
            GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 1121 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 1180

Query: 183  CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
             TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 1181 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 1240

Query: 363  ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
            ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 1241 ISDVDEIKATSGYVFTLGGGAVSWRSCK 1268


>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 622

 Score =  177 bits (450), Expect = 1e-42
 Identities = 85/148 (57%), Positives = 109/148 (73%)
 Frame = +3

Query: 3   GIVLSQSHYAEKVLKKFNAFESVPAKTPIELNVHLSKNRGESVAQEDYARVIGCLMYLTN 182
           GI L QSHY EK+L +F   +S P+ TP + ++ L KN+  +  Q +Y+++IG LMYL +
Sbjct: 329 GITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLAS 388

Query: 183 CTRPDIACAVNKLSRYTSNPSKEHWRALVRVLRYLKYTQSHGLHFLRYPPVLEGYCDANW 362
            TRPDI+ AV+KLSR+TSNP  +HWRAL RV+RYLK T   GLH+  YP VLEGY D+NW
Sbjct: 389 ATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNW 448

Query: 363 ISDTKNSLSTSGYVFTIGGGAVTWRSTK 446
           ISD     +TSGYVFT+GGGAV+WRS K
Sbjct: 449 ISDVDEIKATSGYVFTLGGGAVSWRSCK 476