BLASTX nr result

ID: Mentha28_contig00028858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00028858
         (581 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233113.1| PREDICTED: uncharacterized protein LOC101245...    59   7e-07
ref|XP_006365575.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   5e-06
ref|XP_004233874.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   5e-06

>ref|XP_004233113.1| PREDICTED: uncharacterized protein LOC101245022 [Solanum
           lycopersicum]
          Length = 241

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   WIARIFNNDLSATVLLGFDATEMVFKFVPMPDAEEMEASALMPFVAWEGSLGTLVCTKRA 181
           W+  + +   S  V + FD  ++VF+ +P     +         V  EGSL  L    + 
Sbjct: 64  WLVCMPDKFGSRAVFVRFDVGKLVFEKLPSIGRRKKHQY----LVELEGSLCMLDWDHKD 119

Query: 182 DDSIEKVDLWVLDEREMQWKMNRRFGRIQPGIPVDRCLDCCRDGKIVGGCSNGRLFVYDP 361
           D  +   D+WV+D+ +  W      G   P +  DR L C R+G IV    NG +F+ DP
Sbjct: 120 DCHM---DVWVMDDVD-GWSKKYSVG---PLVGFDRILGCLRNGDIVVKNENGVIFICDP 172

Query: 362 KTDSVVVS-EMRRRKHCSFQIFAFDESLAYVKGMVPVATKKEDHKEK 499
            T+SV  +  +   K  S+ +  + ESL  + GM+PV  KK+D ++K
Sbjct: 173 ITNSVKENFSIDNSKDESYVVVDYSESLFLIGGMLPV--KKQDAQDK 217


>ref|XP_006365575.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like, partial
           [Solanum tuberosum]
          Length = 409

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   WIARIFNNDLSATVLLGFDATEMVFKFVPMPDAEEMEASALMPFVAWEGSLGTLVCTKRA 181
           W+  + +   S  V + FD  ++VF+ +P     +         V  EGSL  L    + 
Sbjct: 249 WLVCMPDKFGSRAVFVRFDVGKLVFEKLPSIGRRKKHQY----LVELEGSLCMLDWDHKD 304

Query: 182 DDSIEKVDLWVLDEREMQWKMNRRFGRIQPGIPVDRCLDCCRDGKIVGGCSNGRLFVYDP 361
           D  +   D+WV+D+ +  W      G   P +  D  L C R+G IV    NG +F+ DP
Sbjct: 305 DCHM---DVWVMDDVD-GWSKKYSVG---PLVGFDLILGCLRNGDIVAKNENGVIFLCDP 357

Query: 362 KTDSVVVS-EMRRRKHCSFQIFAFDESLAYVKGMVPVATKKEDHKEK 499
            T S+         K  S+ I  + ESL  + GM+PV  KK+D ++K
Sbjct: 358 ITSSIKEKFSFDNNKDGSYVIVDYSESLFLIGGMLPV--KKQDAQDK 402


>ref|XP_004233874.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           lycopersicum]
          Length = 414

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   WIARIFNNDLSATVLLGFDATEMVFKFVPMPDAEEMEASALMPFVAWEGSLGTLVCTKRA 181
           W A + +      VL+ FD    VF  +PMP    +        V  E ++G L+  K  
Sbjct: 243 WTALLEDKYGLRDVLVYFDVDRKVFDKLPMPG---ITVGTQWQLVNLEDTVGMLIWAKTV 299

Query: 182 DDSIEKVDLWVLDEREMQWKMNRRFGRIQPGIPVDRCLDCCRDGKIVGGCSNGRLFVYDP 361
             +I   D+WV+ + +  W      G +   +  DR + C R+G I+    NG L ++D 
Sbjct: 300 KHNI---DVWVMHDED-GWSKKCTVGLV---LGFDRLIGCLRNGDILAEDENGVLLLFDM 352

Query: 362 KTDSVVVSE-MRRRKHCSFQIFAFDESLAYVKGMVPVATKKEDHKEK 499
            T SV     +   K  S  IF + ESL  ++ M+PV  +KE  ++K
Sbjct: 353 VTSSVKAKLCIDNAKRGSSVIFNYSESLVLIREMLPV--EKETARDK 397


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