BLASTX nr result
ID: Mentha28_contig00028810
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00028810
(731 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I... 246 4e-63
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 244 3e-62
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus... 241 2e-61
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I... 241 2e-61
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 241 2e-61
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil... 240 4e-61
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun... 240 4e-61
emb|CBI28035.3| unnamed protein product [Vitis vinifera] 240 4e-61
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 239 9e-61
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 239 9e-61
gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlise... 238 1e-60
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 237 4e-60
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I... 235 1e-59
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun... 235 1e-59
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I... 234 2e-59
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin... 234 2e-59
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 234 3e-59
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ... 233 5e-59
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 233 7e-59
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps... 233 7e-59
>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 207
Score = 246 bits (629), Expect = 4e-63
Identities = 124/191 (64%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++LRDRGY V D E+DM+ +QF +K+ ENMKRED++I KS R D S+QIYVFF +E
Sbjct: 20 QMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEA--- 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++G+KP+K +MK NV RAI+V + LT AR ++EA+ K +HLEVF E EL+VNI
Sbjct: 77 KVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNI 136
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
+H LVP+HQLL EEKK+LLERYTVKETQLPRIQ+TDPVA+YYGLKRG+VVKIIRPSET
Sbjct: 137 KDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET 196
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 197 AGRYVTYRYVV 207
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 244 bits (622), Expect = 3e-62
Identities = 127/191 (66%), Positives = 153/191 (80%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++LRDRGY V D E++MS +QF KF ENMKREDL+I K+ R D S+QIYVFF DE
Sbjct: 20 QMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRNDSSDQIYVFFPDE---Q 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MK NV RAI+V + LT ART + E S K +HLEVF E EL+VNI
Sbjct: 77 KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAK-FHLEVFQEAELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+LT EEKK+LL+RYTVKETQLPRIQ+TDP+A+YYGLKRG+VVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
Length = 206
Score = 241 bits (615), Expect = 2e-61
Identities = 121/191 (63%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTRDGS-EQIYVFFSDEGDKD 553
++L+DRGY+V D E+DM+ QF +K+ ENMKREDL+I K R+ S +QIY+FF +E
Sbjct: 20 QMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGLRNNSSDQIYIFFPEE---P 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MKE V RA+++ + LT ART ++E S K +HLEVF E E+++NI
Sbjct: 77 KVGVKTMKTYTNRMKEEGVHRAVLIVQQNLTPFARTCISEISTK-FHLEVFQEAEMLINI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+LTPEEKK+LLERYTVKETQLPRIQITDP+A+YYGLKRG VVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 208
Score = 241 bits (615), Expect = 2e-61
Identities = 122/191 (63%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++LRDRGY V D E+DM+ +QF +K+ ENMKRED++I KS R D S+Q+Y+ F E K
Sbjct: 20 QMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQVYICFFPEEAK- 78
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
+G+KP+K +MK NV RAI+V + LT AR ++EA+ K +HLEVF E EL+VNI
Sbjct: 79 -VGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNI 137
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
+H LVP+HQLL EEKK+LLERYTVKETQLPRIQ+TDPVA+YYGLKRG+VVKIIRPSET
Sbjct: 138 KDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET 197
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 198 AGRYVTYRYVV 208
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 241 bits (614), Expect = 2e-61
Identities = 123/191 (64%), Positives = 153/191 (80%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++L+DRGY V D E++M+ QF KF ENMKREDL+I K+ R D S+QIYVFF +E
Sbjct: 20 QMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEE---Q 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MK NV RAI+V + LT ART +NE S K +HLEVF E EL+VNI
Sbjct: 77 KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK-FHLEVFQEAELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+LT EEKK+LLERYTVKETQLPRIQ++DP+A+Y+GLKRG+VVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+Y+TYRYVV
Sbjct: 196 AGRYITYRYVV 206
>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 240 bits (612), Expect = 4e-61
Identities = 122/191 (63%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++L+DRGY V D E+ M+ QF K+ ENMKREDL+I K+ R D S+QIYVFF DE
Sbjct: 20 QMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRNDNSDQIYVFFPDEA--- 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MK NV RA++V + LT ART +NE S K +HLEVF E EL+VN+
Sbjct: 77 KVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSK-FHLEVFQESELLVNV 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+LT EEKK+LL+RYTVKETQLPRIQ++DP+A+YYGLKRG+VVKIIRPSET
Sbjct: 136 KEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
gi|462416214|gb|EMJ20951.1| hypothetical protein
PRUPE_ppa024345mg [Prunus persica]
Length = 206
Score = 240 bits (612), Expect = 4e-61
Identities = 122/191 (63%), Positives = 156/191 (81%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++LRDR Y+V D E++M+ +QF K+ ENMKREDL I K+ R D ++Q+YVFF +E
Sbjct: 20 QMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTKRNDSTDQLYVFFPEE---P 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MK NV+RAI+V + +T MART ++E S K +H+EVF E ELMVN+
Sbjct: 77 KVGVKTIKTYTNRMKSDNVARAILVTQQNMTPMARTCISEISSK-FHMEVFQEPELMVNV 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
+EH LVP+HQLLT EEKK+LLERYTVKETQLPRIQ+TDPVAKYYGLKRG+V+KIIRPSET
Sbjct: 136 TEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQLTDPVAKYYGLKRGQVMKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+Y+TYRYVV
Sbjct: 196 AGRYITYRYVV 206
>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 240 bits (612), Expect = 4e-61
Identities = 123/190 (64%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
Frame = -3
Query: 726 ILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKDR 550
+L+DRGY V D E++M+ QF KF ENMKREDL+I K+ R D S+QIYVFF +E +
Sbjct: 1 MLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEE---QK 57
Query: 549 IGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNIS 370
+GVK +K N+MK NV RAI+V + LT ART +NE S K +HLEVF E EL+VNI
Sbjct: 58 VGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK-FHLEVFQEAELLVNIK 116
Query: 369 EHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSETA 190
EH LVP+HQ+LT EEKK+LLERYTVKETQLPRIQ++DP+A+Y+GLKRG+VVKIIRPSETA
Sbjct: 117 EHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSETA 176
Query: 189 GKYVTYRYVV 160
G+Y+TYRYVV
Sbjct: 177 GRYITYRYVV 186
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 239 bits (609), Expect = 9e-61
Identities = 122/190 (64%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++LRDR Y+V D E++M+ +QF K+ ENMKREDL+I KS R D +QIYVFF +E
Sbjct: 20 QMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDSPDQIYVFFPEE---Q 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K IN+MK NV RA++V + LT ART ++E S K +HLEVF E EL+VNI
Sbjct: 77 KVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTK-FHLEVFQEAELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+LT EEKK+LLERYTVKETQLPRIQ+TDP+A+YYGLKRG+VVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYV 163
AG+Y+TYRYV
Sbjct: 196 AGRYITYRYV 205
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 239 bits (609), Expect = 9e-61
Identities = 123/191 (64%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++L+DRGY V D E+ M+ +QF K+ NMKREDL+I K+ R D S+QIYVFF +E
Sbjct: 20 QMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSSDQIYVFFPEEA--- 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MK NV RAI+V + LT ART +NE S K +HLEVF E EL+VNI
Sbjct: 77 KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK-FHLEVFQEAELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+L+ EEKK+LLERYTVKETQLPRIQITDP+A+YYGLKRG+VVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYV+
Sbjct: 196 AGRYVTYRYVI 206
>gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlisea aurea]
Length = 208
Score = 238 bits (608), Expect = 1e-60
Identities = 117/191 (61%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTRDG-SEQIYVFFSDEGDKD 553
++L+DRGYIV D E++M+ QF +K+ ENMKRED + K R+ S+QIYVFF +E
Sbjct: 21 QMLKDRGYIVGDFEIEMTKSQFIQKYGENMKREDQTVLKGLRNNPSDQIYVFFPEE---P 77
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVKP+K N+MKE + +AI+V + LT +AR+ + E +HLEVF E EL++NI
Sbjct: 78 KVGVKPIKAYTNKMKEEGIHKAILVVQQNLTPIARSCITETISSKFHLEVFQEAELLINI 137
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
+H LVP+HQLL+PEEKK+LLERYTVKETQLPRIQ+TDP+A+YYG+KRGEVVKIIRPSET
Sbjct: 138 KDHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYGMKRGEVVKIIRPSET 197
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 198 AGRYVTYRYVV 208
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 237 bits (604), Expect = 4e-60
Identities = 123/191 (64%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTRDGS-EQIYVFFSDEGDKD 553
++LRDRG++V D E++MS +F K+ E+MKREDL+I KS +D S +QIYVFF DE
Sbjct: 20 QMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDE---P 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+M NV RAI+V LT ART ++E S K +HLEVF E EL+VNI
Sbjct: 77 KVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK-FHLEVFQEAELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EHELVP+HQ+LT EKK+LLERYTVKETQLPRIQ+TDPVA+YYGLKRG+VVKIIRPSET
Sbjct: 136 KEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYR+VV
Sbjct: 196 AGRYVTYRFVV 206
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 235 bits (600), Expect = 1e-59
Identities = 125/191 (65%), Positives = 151/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTRDG-SEQIYVFFSDEGDKD 553
E+LRDR Y+V D E++MS QF EK+ ENMKREDL+I K+ +D S+QIYVFF +E
Sbjct: 20 EMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKPSDQIYVFFPEEV--- 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K IN+M NV RAI+V LT ART V E S K +HLEVF E EL+VNI
Sbjct: 77 KVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSVAEISSK-FHLEVFQEAELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
+H LVP+HQ+LT EKK+LLERYTVKETQLPRIQ+TDPVA+YYGLKRG+VVKIIRPSET
Sbjct: 136 KDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYR+VV
Sbjct: 196 AGRYVTYRFVV 206
>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
gi|462414880|gb|EMJ19617.1| hypothetical protein
PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 235 bits (599), Expect = 1e-59
Identities = 119/191 (62%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++L+DR Y+V D E++M+ +QF K+ ENMKREDL I K+ R D S+QIYVFF +E
Sbjct: 20 QMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDSSDQIYVFFPEE---P 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MK NV RA++V + LT A+T ++E S K +HLEVF E EL+VNI
Sbjct: 77 KVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSK-FHLEVFQEAELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+H +LT EEKK+LLERYTVKETQLPRIQ+TDP+AKYYGLKRG+VVKIIRPSET
Sbjct: 136 KEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+Y+TYRYV+
Sbjct: 196 AGRYITYRYVI 206
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Solanum lycopersicum]
gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
isoform 2 [Solanum lycopersicum]
Length = 206
Score = 234 bits (598), Expect = 2e-59
Identities = 119/191 (62%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTRDGS-EQIYVFFSDEGDKD 553
E+L DRGY+V D E++MS QF +K+ ENMKREDL+I K+ R+ S +QIYVFF +E
Sbjct: 20 EMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRNNSSDQIYVFFPEE---P 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K +MK+ +V +AI++ + LT ART ++E S K +HLEVF E E++VNI
Sbjct: 77 KVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTK-FHLEVFQEAEMLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
H L+P+HQLL+PEEKK+LLERYTVKETQLPRIQITDP+A+YYGLKRG+VVKIIRPSET
Sbjct: 136 KNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+Y+TYRYVV
Sbjct: 196 AGRYITYRYVV 206
>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
gi|255627545|gb|ACU14117.1| unknown [Glycine max]
Length = 206
Score = 234 bits (598), Expect = 2e-59
Identities = 122/191 (63%), Positives = 151/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTRDGS-EQIYVFFSDEGDKD 553
++LRDR ++V D E++MS +F K+ E+MKREDL+I KS +D S +QIYVFF DE
Sbjct: 20 QMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDE---P 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+M NV RAI+V LT ART ++E S K +HLEVF E EL+VNI
Sbjct: 77 KVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK-FHLEVFQEAELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EHELVP+HQ+LT EKK+LLERYTVKETQLPRIQ+TDPVA+YYGLKRG+VVKIIRPSET
Sbjct: 136 KEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYR+VV
Sbjct: 196 AGRYVTYRFVV 206
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 234 bits (596), Expect = 3e-59
Identities = 119/191 (62%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTRDGS-EQIYVFFSDEGDKD 553
E+L DRGY+V D E++MS +F +K+ ENMKREDL++ K+ R+ S +QIYVFF +E
Sbjct: 20 EMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRNNSSDQIYVFFPEE---P 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K +MK+ +V +AI++ + LT ART ++E SIK +HLEVF E E++VNI
Sbjct: 77 KVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIK-FHLEVFQEAEMLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
H L+P+HQ LTPEEKK+LLERYTVKETQLPRIQITDP+A+YYGLKRG+VVKIIRPSET
Sbjct: 136 KNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
Full=DNA-directed RNA polymerases II and IV subunit 5A;
Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
II subunit E; AltName: Full=RNA polymerase I, II and III
24.3 kDa subunit; Short=AtRPB24.3
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
NRPB5 [Arabidopsis thaliana]
Length = 205
Score = 233 bits (594), Expect = 5e-59
Identities = 119/191 (62%), Positives = 151/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++LRDRGY + D E+ M+ +QF K +NMKREDL+ K+ R D S+Q+Y+FF DE
Sbjct: 19 QMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEA--- 75
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MK NV RAI+V + LT ART ++E S K +HLEVF E E++VNI
Sbjct: 76 KVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSK-FHLEVFQEAEMLVNI 134
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+LT EEKK+LLERYTVKETQLPRIQ+TDP+A+Y+GLKRG+VVKIIRPSET
Sbjct: 135 KEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSET 194
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 195 AGRYVTYRYVV 205
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 233 bits (593), Expect = 7e-59
Identities = 121/191 (63%), Positives = 151/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTRDG-SEQIYVFFSDEGDKD 553
++LRDRGY+V D E++M+ QF EKF + +K++DL+I K+ R+ SEQIYVFF +E
Sbjct: 20 QMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNNPSEQIYVFFPEE---Q 76
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK VK +MK NV RAI+V + LT AR V E S K +HLE+F E EL+VNI
Sbjct: 77 KVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAK-FHLEIFQESELLVNI 135
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+LT EEKK+LLERYT+KETQLPRIQITDP+A+YYGLKRG+VVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 195
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
gi|482567281|gb|EOA31470.1| hypothetical protein
CARUB_v10014656mg [Capsella rubella]
Length = 205
Score = 233 bits (593), Expect = 7e-59
Identities = 117/191 (61%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = -3
Query: 729 EILRDRGYIVTDVEVDMSFKQFTEKFSENMKREDLMITKSTR-DGSEQIYVFFSDEGDKD 553
++L+DRGY + D E+ ++ +QF K+ +NMKREDL+ K+ R D S+Q+Y+FF DE
Sbjct: 19 QMLKDRGYFIADSEITITKQQFIRKYGDNMKREDLVTLKAKRNDNSDQLYIFFPDEA--- 75
Query: 552 RIGVKPVKNIINQMKESNVSRAIMVGTKVLTYMARTYVNEASIKGYHLEVFLEGELMVNI 373
++GVK +K N+MK NV RAI+V + LT ART ++E S K +HLEVF E E++VNI
Sbjct: 76 KVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSK-FHLEVFQEAEMLVNI 134
Query: 372 SEHELVPQHQLLTPEEKKSLLERYTVKETQLPRIQITDPVAKYYGLKRGEVVKIIRPSET 193
EH LVP+HQ+LT EEKK+LLERYTVKETQLPRIQ+TDP+A+Y+GLKRG+VVKIIRPSET
Sbjct: 135 KEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSET 194
Query: 192 AGKYVTYRYVV 160
AG+YVTYRYVV
Sbjct: 195 AGRYVTYRYVV 205