BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00028347
         (1144 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus...   573   e-161
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...   559   e-157
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...   557   e-156
gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlise...   551   e-154
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ...   548   e-153
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su...   543   e-152
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   541   e-151
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su...   541   e-151
ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phas...   540   e-151
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun...   540   e-151
ref|XP_006282990.1| hypothetical protein CARUB_v10003976mg [Caps...   538   e-150
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su...   536   e-150
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...   535   e-149
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   535   e-149
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...   534   e-149
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...   534   e-149
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...   534   e-149
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...   534   e-149
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...   534   e-149
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun...   531   e-148

>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
          Length = 1842

 Score =  573 bits (1476), Expect = e-161
 Identities = 279/323 (86%), Positives = 296/323 (91%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MDLRFPFSPAEVAKVR VQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETCMANMA+CPGHFGHLELAKPM+HIGF+K VLSILRCVCFNCSKILA+ EEPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQAMRIRNPKNRL+KIL+ACK+K+KC+GGDEIDGH QDTEEPVKKSRGGCGAQQPK+++
Sbjct: 121  FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            DGMK+VA+YK           MPEPVERKQ LSAEKVLSILKRITDEDC  LGLNP+FAR
Sbjct: 181  DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFHVATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPR 323


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score =  559 bits (1440), Expect = e-157
 Identities = 270/323 (83%), Positives = 292/323 (90%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETCMANMA+CPGHFGHLELAKPM+HIGF+K VLSILRCVCFNCSKILA+ ++PK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQAMRIRNPKNRL+K+L+ACK+K+KCEGGDEID  GQDTEEPVKKSRGGCGAQQPK+++
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            DGMK+VA+YK           MPEPVERKQ LSAE+VLSILKR++DEDC  LGLNP+FAR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQ L         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDNDLPGQPR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPR 323


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score =  557 bits (1435), Expect = e-156
 Identities = 269/323 (83%), Positives = 291/323 (90%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETCMANMA+CPGHFGHLELAKPM+HIGF+K VLSILRCVCFNCSKILA+ ++PK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQAMRIRNPKNRL+K+L+ACK+K+KCEGGDEID  G DTEEPVKKSRGGCGAQQPK+++
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            DGMK+VA+YK           MPEPVERKQ LSAE+VLSILKR++DEDC  LGLNP+FAR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQ L         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDNDLPGQPR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPR 323


>gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlisea aurea]
          Length = 652

 Score =  551 bits (1420), Expect = e-154
 Identities = 266/323 (82%), Positives = 291/323 (90%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MDLRFP+SPAEV+K+R VQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVSKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETCMANMA+CPGHFGHLELAKPM+HIGF+KTVLSILRCVCFNCSKIL + EEP 
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILVDEEEPA 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQ+MRIRNPKNRL+KIL+ACK+KSKCEGGDEID  G D+EEPVK+SRGGCGAQ+PK+++
Sbjct: 121  FKQSMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGADSEEPVKRSRGGCGAQKPKISI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            DGMK+VA+YK           MPEPVERKQILSAEKVLSILKRITDEDC  LGLNP++AR
Sbjct: 181  DGMKMVAEYKFQKKRNDEQEQMPEPVERKQILSAEKVLSILKRITDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLK+QE NG+ AHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEHNGSAAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPR 323


>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
            cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|590702285|ref|XP_007046586.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
          Length = 1861

 Score =  548 bits (1413), Expect = e-153
 Identities = 264/323 (81%), Positives = 290/323 (89%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MDLRFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ EE K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA++I+NPKNRLKKIL+ACK+KSKCEGGDEID  GQDTEEPVKKSRGGCGAQQPKL++
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            DGMK++A+YK           +PEPVERKQ L+AE+VLS+LKRI+DEDC  LGLNP+FAR
Sbjct: 181  DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTH LAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFHVATYFDN+LPG PR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPR 323


>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
            max]
          Length = 1827

 Score =  543 bits (1398), Expect = e-152
 Identities = 259/323 (80%), Positives = 289/323 (89%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRK+KCETC A+MA+CPGHFGHLELAKPM+HIGF+KTVL+I+RCVCFNCSKILA+  + K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA+RIRNPKNRLKKIL+ACK+KSKCEGGDEID  GQDT+EPVKKSRGGCGAQQPK+T+
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ LSAE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPG PR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPR 323


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score =  541 bits (1394), Expect = e-151
 Identities = 261/323 (80%), Positives = 289/323 (89%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ E+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA +IRNPKNRLKKIL+ACK+KSKCEGGDEI+    D++EPVKKSRGGCGAQQPKLT+
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ LSAE+VL++LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFHVATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPR 323


>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Glycine max] gi|571435633|ref|XP_006573537.1| PREDICTED:
            DNA-directed RNA polymerase II subunit 1-like isoform X2
            [Glycine max]
          Length = 1827

 Score =  541 bits (1393), Expect = e-151
 Identities = 259/323 (80%), Positives = 288/323 (89%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRK+KCETC A+MA+CPGHFGHLELAKPM+HIGF+KTVL+I+RCVCFNCSKILA+  + K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA+RIRNPKNRLKKIL+ACK+KSKCEGGDEID  GQDTEE VKKSRGGCGAQQPK+T+
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEESVKKSRGGCGAQQPKITI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ LSAE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPG PR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPR 323


>ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
            gi|561031277|gb|ESW29856.1| hypothetical protein
            PHAVU_002G104500g [Phaseolus vulgaris]
          Length = 1834

 Score =  540 bits (1392), Expect = e-151
 Identities = 258/323 (79%), Positives = 288/323 (89%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRK+KCETC A+MA+CPGHFGHLELAKPM+HIGF+KTVL+I+RCVCFNCSKILA+  + K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA+RIRNPKNRLKKIL+ACK+KSKCEGGDEID  GQDT+EPVKKSRGGCGAQQPK+T+
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ LSAE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKIIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPG PR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPR 323


>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
            [Populus trichocarpa] gi|550338614|gb|ERP60834.1|
            DNA-directed RNA polymerase II largest subunit family
            protein [Populus trichocarpa]
          Length = 1837

 Score =  540 bits (1391), Expect = e-151
 Identities = 259/323 (80%), Positives = 290/323 (89%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD RFP+SPAEVAKVR VQFGILSPDEIRQMSV+ IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ E+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA++I+NPK+RLKKIL+ACK+K+KCEGGDEID  GQD EEPVKKSRGGCGAQQPKLT+
Sbjct: 121  FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ L+AE+VLS+LKRI+DEDC  LGL+P++AR
Sbjct: 181  EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQER+GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFHVATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPR 323


>ref|XP_006282990.1| hypothetical protein CARUB_v10003976mg [Capsella rubella]
            gi|482551695|gb|EOA15888.1| hypothetical protein
            CARUB_v10003976mg [Capsella rubella]
          Length = 1838

 Score =  538 bits (1385), Expect = e-150
 Identities = 255/324 (78%), Positives = 288/324 (88%), Gaps = 1/324 (0%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD RFPFSPAEV+KVR VQFGILSPDEIRQMSV+H+EHSETTE+GKPK+GGLSD RLGTI
Sbjct: 1    MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDIRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRK+KCETCMANMA+CPGHFGHLELAKPMYH+GF+KTVLSI+RCVCFNCSKILA+ EE K
Sbjct: 61   DRKVKCETCMANMAECPGHFGHLELAKPMYHVGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDG-HGQDTEEPVKKSRGGCGAQQPKLT 710
            FKQAM+I+NPKNRLKKIL+ACK+K+KC+GGDEID  H QDTEEPVKKSRGGCGAQQPKLT
Sbjct: 121  FKQAMKIKNPKNRLKKILDACKNKTKCDGGDEIDDVHSQDTEEPVKKSRGGCGAQQPKLT 180

Query: 711  LDGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFA 890
            ++GMK++A+YK           +PEP ERKQ L A++VLS+LKRI+DEDC  LG NP+FA
Sbjct: 181  IEGMKMIAEYKITRKKTDEPDQLPEPAERKQTLGADRVLSVLKRISDEDCQLLGFNPKFA 240

Query: 891  RPDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHII 1070
            RPDWMIL+VL         SVMMD +SRSEDDLTHQLAMIIRHNENLKRQE+NGAPAHII
Sbjct: 241  RPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHII 300

Query: 1071 SEFAQLLQFHVATYFDNDLPGQPR 1142
            SEF QLLQFH+ATYFDN+LPGQPR
Sbjct: 301  SEFTQLLQFHIATYFDNELPGQPR 324


>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer
            arietinum]
          Length = 1834

 Score =  536 bits (1380), Expect = e-150
 Identities = 255/323 (78%), Positives = 289/323 (89%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPKIGGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC A+MA+CPGHFG+LELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA+RI++PKNRL+KIL+ACK+K+KCEGGD+ID  G DTEEPVKKSRGGCGAQQPK+T+
Sbjct: 121  FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ LSAE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDW+ILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPG PR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPR 323


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score =  535 bits (1377), Expect = e-149
 Identities = 254/323 (78%), Positives = 287/323 (88%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MDLRFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVL+I+R VCFNCSKIL + E+PK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA+RI+NPKNRL+KIL+ACK+K+KCEGGDEID  GQD+++PVKKSRGGCGAQQPK+++
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK+ A+YK           +PEPVERKQ L+AE+VL ILKRITDEDC  LGLNP++AR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPG PR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPR 323


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score =  535 bits (1377), Expect = e-149
 Identities = 254/323 (78%), Positives = 287/323 (88%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MDLRFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVL+I+R VCFNCSKIL + E+PK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA+RI+NPKNRL+KIL+ACK+K+KCEGGDEID  GQD+++PVKKSRGGCGAQQPK+++
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK+ A+YK           +PEPVERKQ L+AE+VL ILKRITDEDC  LGLNP++AR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPG PR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPR 323


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score =  534 bits (1376), Expect = e-149
 Identities = 256/323 (79%), Positives = 287/323 (88%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK++GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ L+AE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPR 323


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score =  534 bits (1376), Expect = e-149
 Identities = 256/323 (79%), Positives = 287/323 (88%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK++GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ L+AE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPR 323


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score =  534 bits (1376), Expect = e-149
 Identities = 256/323 (79%), Positives = 287/323 (88%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK++GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ L+AE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPR 323


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score =  534 bits (1376), Expect = e-149
 Identities = 256/323 (79%), Positives = 287/323 (88%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK++GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ L+AE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPR 323


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score =  534 bits (1375), Expect = e-149
 Identities = 256/323 (79%), Positives = 286/323 (88%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK +GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ L+AE+VL +LKRI+DEDC  LGLNP++AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFH+ATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPR 323


>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
            communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
            polymerase II largest subunit, putative [Ricinus
            communis]
          Length = 1855

 Score =  531 bits (1369), Expect = e-148
 Identities = 253/323 (78%), Positives = 287/323 (88%)
 Frame = +3

Query: 174  MDLRFPFSPAEVAKVRFVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 353
            MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IE SETTERGKPK GGLSD RLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60

Query: 354  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 533
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ E+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 534  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTL 713
            FKQA++I+NPKNRLKKIL+ACK+K+KCEGGD+ID H QDT+EPVKKSRGGCGAQQP++T+
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180

Query: 714  DGMKLVADYKNXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCTTLGLNPQFAR 893
            +GMK++A+YK           +PEPVERKQ L+AE+VL +LKRI+D+DC  LG NP++AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240

Query: 894  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1073
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLK+QE+ GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300

Query: 1074 EFAQLLQFHVATYFDNDLPGQPR 1142
            EFAQLLQFHVATYFDN+LPGQPR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPR 323