BLASTX nr result
ID: Mentha28_contig00028285
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha28_contig00028285 (1073 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr... 499 e-139 ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s... 498 e-138 ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s... 498 e-138 ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s... 497 e-138 ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s... 494 e-137 ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab... 494 e-137 ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, par... 493 e-137 ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, par... 493 e-137 ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob... 493 e-137 ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theob... 493 e-137 ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theob... 493 e-137 ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theob... 493 e-137 ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob... 493 e-137 ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put... 490 e-136 ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Caps... 489 e-136 ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s... 488 e-135 dbj|BAB11387.1| DNA-directed RNA polymerase subunit [Arabidopsis... 485 e-134 ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis t... 485 e-134 ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr... 484 e-134 ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theob... 480 e-133 >ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina] gi|557534507|gb|ESR45625.1| hypothetical protein CICLE_v10000078mg [Citrus clementina] Length = 1149 Score = 499 bits (1285), Expect = e-139 Identities = 250/358 (69%), Positives = 293/358 (81%), Gaps = 1/358 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+ VNIEY+ G+ K K DV+IGR+PIMLRSC CVLYGKDE ELA+ GECPLDPGG Sbjct: 116 PILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGG 175 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YFIIKGTEKV+L+QEQLSKNR+IID DKKG + A +MEK K+YL L Sbjct: 176 YFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLL 235 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDPRYS LLLPSIEEC ++TQ +ALEYL Sbjct: 236 NQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYL 295 Query: 533 ENKVQRYQNNTRP-EKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R + P ++EGRA +ILRD FLAN+PVH NNFRPKC YVAVMLRRM+EA+LNK Sbjct: 296 EGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNK 355 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIG 177 D MDDKDYVGNKRLELSGQL++LLFEDLFKTM E + ++++LS+ SRS+RFD+SQ I Sbjct: 356 DAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIV 415 Query: 176 GESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 +SIT GLERTLSTGNFD+KRFKMHRKGMTQ +ARLS+I TLG MT++SPQFEKSRKV Sbjct: 416 RDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKV 473 >ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X3 [Citrus sinensis] Length = 1058 Score = 498 bits (1281), Expect = e-138 Identities = 249/358 (69%), Positives = 293/358 (81%), Gaps = 1/358 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+ VNIEY+ G+ K K DV+IGR+PIMLRSC CVLYGKDE ELA+ GECPLDPGG Sbjct: 25 PILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGG 84 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YFIIKGTEKV+L+QEQLSKNR+IID DKKG + A +MEK K+YL L Sbjct: 85 YFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLL 144 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMG+ESDQEVVQM+GRDPRYS LLLPSIEEC ++TQ +ALEYL Sbjct: 145 NQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYL 204 Query: 533 ENKVQRYQNNTRP-EKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R + P ++EGRA +ILRD FLAN+PVH NNFRPKC YVAVMLRRM+EA+LNK Sbjct: 205 EGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNK 264 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIG 177 D MDDKDYVGNKRLELSGQL++LLFEDLFKTM E + ++++LS+ SRS+RFD+SQ I Sbjct: 265 DAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIV 324 Query: 176 GESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 +SIT GLERTLSTGNFD+KRFKMHRKGMTQ +ARLS+I TLG MT++SPQFEKSRKV Sbjct: 325 RDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKV 382 >ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X2 [Citrus sinensis] Length = 1149 Score = 498 bits (1281), Expect = e-138 Identities = 249/358 (69%), Positives = 293/358 (81%), Gaps = 1/358 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+ VNIEY+ G+ K K DV+IGR+PIMLRSC CVLYGKDE ELA+ GECPLDPGG Sbjct: 116 PILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGG 175 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YFIIKGTEKV+L+QEQLSKNR+IID DKKG + A +MEK K+YL L Sbjct: 176 YFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLL 235 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMG+ESDQEVVQM+GRDPRYS LLLPSIEEC ++TQ +ALEYL Sbjct: 236 NQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYL 295 Query: 533 ENKVQRYQNNTRP-EKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R + P ++EGRA +ILRD FLAN+PVH NNFRPKC YVAVMLRRM+EA+LNK Sbjct: 296 EGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNK 355 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIG 177 D MDDKDYVGNKRLELSGQL++LLFEDLFKTM E + ++++LS+ SRS+RFD+SQ I Sbjct: 356 DAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIV 415 Query: 176 GESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 +SIT GLERTLSTGNFD+KRFKMHRKGMTQ +ARLS+I TLG MT++SPQFEKSRKV Sbjct: 416 RDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKV 473 >ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X2 [Solanum tuberosum] Length = 1153 Score = 497 bits (1279), Expect = e-138 Identities = 258/362 (71%), Positives = 297/362 (82%), Gaps = 5/362 (1%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+YV IEY G+ V KK+V+IGR+PIMLRS CCVLYGKDE+ELA+ GECPLDPGG Sbjct: 118 PIYVTIEYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGG 177 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKGTEKVIL+QEQLSKNRIIID DKKG VQA KMEKEK+YL L Sbjct: 178 YFVIKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLEL 237 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 + F K+PIM+V+KAMGMESDQEVVQMIGRDPR+S LLLPSIEEC ++TQ+QALE+L Sbjct: 238 NMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFL 297 Query: 533 EN----KVQRYQNNTRP-EKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEA 369 E+ K+ Y +T P EK RAL+ILRD FLAN+PVH++NFR KCIYVAVM+RRMMEA Sbjct: 298 ESDKMLKMPSY--STGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEA 355 Query: 368 ILNKDTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDIS 189 ILNKD MDDKDYVGNKRLELSGQLL+LLFEDLFKTMN+EA R ++ +L+R SRS+R DIS Sbjct: 356 ILNKDAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDIS 415 Query: 188 QLIGGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSR 9 Q I +SIT GLERTLSTGN+D+KRF+MHRKGMTQ VARLSYI +LG MTKISPQFEKSR Sbjct: 416 QYIVKDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSR 475 Query: 8 KV 3 KV Sbjct: 476 KV 477 >ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum lycopersicum] Length = 1183 Score = 494 bits (1272), Expect = e-137 Identities = 257/362 (70%), Positives = 296/362 (81%), Gaps = 5/362 (1%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+YV I+Y G+ V KK+V+IGR+PIMLRS CCVLYGKDE+ELA+ GECPLDPGG Sbjct: 148 PIYVTIDYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGG 207 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKGTEKVIL+QEQLSKNRIIID DKKG VQA KMEKEK+YL L Sbjct: 208 YFVIKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLEL 267 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 + F K+PIM+V+KAMGMESDQEVVQMIGRDPR+S LLLPSIEEC ++TQ QALE+L Sbjct: 268 NMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFL 327 Query: 533 EN----KVQRYQNNTRP-EKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEA 369 E+ K+ Y +T P EK RAL+ILRD FLAN+PVH++NFR KCIYVAVM+RRMMEA Sbjct: 328 ESDKMLKMPSY--STGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEA 385 Query: 368 ILNKDTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDIS 189 ILNKD MDDKDYVGNKRLELSGQLL+LLFEDLFKTMN+EA R ++ +L+R SRS+R DIS Sbjct: 386 ILNKDAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDIS 445 Query: 188 QLIGGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSR 9 Q I +SIT GLERTLSTGN+D+KRF+MHRKGMTQ VARLSYI +LG MTKISPQFEKSR Sbjct: 446 QYIIKDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSR 505 Query: 8 KV 3 KV Sbjct: 506 KV 507 >ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata] Length = 1165 Score = 494 bits (1271), Expect = e-137 Identities = 251/361 (69%), Positives = 296/361 (81%), Gaps = 4/361 (1%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+YVNIEY++G+ K +K D +IGR+PIMLRSC CVL+GKDEEELA+ GECPLDPGG Sbjct: 117 PIYVNIEYVHGSHGKKATSVKNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGG 176 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKGTEKV+L+QEQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 177 YFVIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFL 236 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 HQF KKIPI+IVLKAMGMESDQE+VQM+GRDPR+S LLPSIEECV V+TQ QAL+YL Sbjct: 237 HQFVKKIPIVIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYL 296 Query: 533 ENKVQRYQNNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNKD 354 E KV++ PEK+GRAL ILRD FLA++PV +NNFR KC YV VMLRRM+EA+LNKD Sbjct: 297 EAKVKKTSYGPPPEKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKD 356 Query: 353 TMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQ-LIG 177 +MDDKDYVGNKRLELSGQL++LLFEDLFKTM EA +K++ +LS+ SR++RFD SQ L Sbjct: 357 SMDDKDYVGNKRLELSGQLMSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTT 416 Query: 176 GES---ITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRK 6 G+S I+ GLERTLSTGNFDIKRF+MHRKGMTQ + RLS+I +LGF+TKISPQFEKSRK Sbjct: 417 GDSQNTISVGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRK 476 Query: 5 V 3 V Sbjct: 477 V 477 >ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, partial [Populus trichocarpa] gi|550321669|gb|EEF05487.2| hypothetical protein POPTR_0015s005302g, partial [Populus trichocarpa] Length = 1035 Score = 493 bits (1270), Expect = e-137 Identities = 247/359 (68%), Positives = 293/359 (81%), Gaps = 2/359 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+ VNIEY++G+ K IK DV+IGR+PIMLRSCCCVLYGK+E ELA+ GECPLDPGG Sbjct: 120 PILVNIEYISGSHGRKEKMIKNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPLDPGG 179 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF++KGTEKVIL+QEQLSKNRIIID DKKG + A MEKEK+YL L Sbjct: 180 YFVVKGTEKVILIQEQLSKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCL 239 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDPRYS LLLPSIEEC V+TQ QALEYL Sbjct: 240 NQFAKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYL 299 Query: 533 ENKVQR--YQNNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILN 360 E V+R Y +++ ++E RAL ILRD F+AN+PV +NNFRPKCIYVAVMLRRMMEA+LN Sbjct: 300 EAMVKRSTYSSSSTEKQENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLN 359 Query: 359 KDTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLI 180 KD MDDKDYVGNKRLELSGQL++LLFEDLFKTM E + + +L + +RS+RFD SQ I Sbjct: 360 KDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYI 419 Query: 179 GGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 +SITNGLER LSTGN+D+KRF+M+RKG+TQ + RLSY+A+LG MT+ISPQFEKSRKV Sbjct: 420 VRDSITNGLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKV 478 >ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, partial [Populus trichocarpa] gi|550321670|gb|EEF05483.2| hypothetical protein POPTR_0015s005302g, partial [Populus trichocarpa] Length = 1034 Score = 493 bits (1269), Expect = e-137 Identities = 248/358 (69%), Positives = 292/358 (81%), Gaps = 1/358 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+ VNIEY++G+ K IK DV+IGR+PIMLRSCCCVLYGK+E ELA+ GECPLDPGG Sbjct: 120 PILVNIEYISGSHGRKEKMIKNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPLDPGG 179 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF++KGTEKVIL+QEQLSKNRIIID DKKG + A MEKEK+YL L Sbjct: 180 YFVVKGTEKVILIQEQLSKNRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCL 239 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDPRYS LLLPSIEEC V+TQ QALEYL Sbjct: 240 NQFAKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYL 299 Query: 533 ENKVQRYQ-NNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E V+R +++ EKE RAL ILRD F+AN+PV +NNFRPKCIYVAVMLRRMMEA+LNK Sbjct: 300 EAMVKRSTYSSSSTEKENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNK 359 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIG 177 D MDDKDYVGNKRLELSGQL++LLFEDLFKTM E + + +L + +RS+RFD SQ I Sbjct: 360 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIV 419 Query: 176 GESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 +SITNGLER LSTGN+D+KRF+M+RKG+TQ + RLSY+A+LG MT+ISPQFEKSRKV Sbjct: 420 RDSITNGLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKV 477 >ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao] gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao] Length = 1082 Score = 493 bits (1269), Expect = e-137 Identities = 251/359 (69%), Positives = 290/359 (80%), Gaps = 2/359 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY+ G+ K K D++IGR+PIMLRSCCCVLYGKDE ELA+ GECPLDPGG Sbjct: 25 PIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGG 84 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKG EKVIL+QEQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 85 YFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLL 144 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDP Y+ +LLPSIEEC ++TQ QALEYL Sbjct: 145 NQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYL 204 Query: 533 ENKVQRYQ-NNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R EKEGRAL+ILRD FLAN+PV NNFRPKC+YVAVMLRRM+EAILNK Sbjct: 205 ETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNK 264 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLI- 180 D MDDKDYVGNKRLELSGQL++LLFEDLFKT E + +++VLS+ SRS+ D SQ + Sbjct: 265 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLR 324 Query: 179 GGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 E+IT GLERTLSTGNFDIKRFKMHRKGMTQ +ARLS+I TLG+MTK+SPQFEKSRKV Sbjct: 325 SRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKV 383 >ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao] gi|508727717|gb|EOY19614.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao] Length = 1034 Score = 493 bits (1269), Expect = e-137 Identities = 251/359 (69%), Positives = 290/359 (80%), Gaps = 2/359 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY+ G+ K K D++IGR+PIMLRSCCCVLYGKDE ELA+ GECPLDPGG Sbjct: 124 PIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGG 183 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKG EKVIL+QEQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 184 YFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLL 243 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDP Y+ +LLPSIEEC ++TQ QALEYL Sbjct: 244 NQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYL 303 Query: 533 ENKVQRYQ-NNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R EKEGRAL+ILRD FLAN+PV NNFRPKC+YVAVMLRRM+EAILNK Sbjct: 304 ETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNK 363 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLI- 180 D MDDKDYVGNKRLELSGQL++LLFEDLFKT E + +++VLS+ SRS+ D SQ + Sbjct: 364 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLR 423 Query: 179 GGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 E+IT GLERTLSTGNFDIKRFKMHRKGMTQ +ARLS+I TLG+MTK+SPQFEKSRKV Sbjct: 424 SRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKV 482 >ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao] gi|508727715|gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao] Length = 1034 Score = 493 bits (1269), Expect = e-137 Identities = 251/359 (69%), Positives = 290/359 (80%), Gaps = 2/359 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY+ G+ K K D++IGR+PIMLRSCCCVLYGKDE ELA+ GECPLDPGG Sbjct: 124 PIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGG 183 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKG EKVIL+QEQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 184 YFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLL 243 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDP Y+ +LLPSIEEC ++TQ QALEYL Sbjct: 244 NQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYL 303 Query: 533 ENKVQRYQ-NNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R EKEGRAL+ILRD FLAN+PV NNFRPKC+YVAVMLRRM+EAILNK Sbjct: 304 ETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNK 363 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLI- 180 D MDDKDYVGNKRLELSGQL++LLFEDLFKT E + +++VLS+ SRS+ D SQ + Sbjct: 364 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLR 423 Query: 179 GGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 E+IT GLERTLSTGNFDIKRFKMHRKGMTQ +ARLS+I TLG+MTK+SPQFEKSRKV Sbjct: 424 SRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKV 482 >ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao] gi|508727713|gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao] Length = 1011 Score = 493 bits (1269), Expect = e-137 Identities = 251/359 (69%), Positives = 290/359 (80%), Gaps = 2/359 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY+ G+ K K D++IGR+PIMLRSCCCVLYGKDE ELA+ GECPLDPGG Sbjct: 124 PIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGG 183 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKG EKVIL+QEQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 184 YFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLL 243 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDP Y+ +LLPSIEEC ++TQ QALEYL Sbjct: 244 NQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYL 303 Query: 533 ENKVQRYQ-NNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R EKEGRAL+ILRD FLAN+PV NNFRPKC+YVAVMLRRM+EAILNK Sbjct: 304 ETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNK 363 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLI- 180 D MDDKDYVGNKRLELSGQL++LLFEDLFKT E + +++VLS+ SRS+ D SQ + Sbjct: 364 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLR 423 Query: 179 GGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 E+IT GLERTLSTGNFDIKRFKMHRKGMTQ +ARLS+I TLG+MTK+SPQFEKSRKV Sbjct: 424 SRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKV 482 >ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] Length = 1158 Score = 493 bits (1269), Expect = e-137 Identities = 251/359 (69%), Positives = 290/359 (80%), Gaps = 2/359 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY+ G+ K K D++IGR+PIMLRSCCCVLYGKDE ELA+ GECPLDPGG Sbjct: 124 PIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGG 183 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKG EKVIL+QEQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 184 YFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLL 243 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDP Y+ +LLPSIEEC ++TQ QALEYL Sbjct: 244 NQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYL 303 Query: 533 ENKVQRYQ-NNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R EKEGRAL+ILRD FLAN+PV NNFRPKC+YVAVMLRRM+EAILNK Sbjct: 304 ETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNK 363 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLI- 180 D MDDKDYVGNKRLELSGQL++LLFEDLFKT E + +++VLS+ SRS+ D SQ + Sbjct: 364 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLR 423 Query: 179 GGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 E+IT GLERTLSTGNFDIKRFKMHRKGMTQ +ARLS+I TLG+MTK+SPQFEKSRKV Sbjct: 424 SRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKV 482 >ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis] Length = 1139 Score = 490 bits (1261), Expect = e-136 Identities = 248/357 (69%), Positives = 289/357 (80%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+ VN+EY+ G+ D K K DV+IGR+PIMLRS CVLYGKDE ELA+ GECPLDPGG Sbjct: 122 PILVNVEYIYGSHDQKTRVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGG 181 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKGTEKVIL+QEQLSKNRIIID DKKG + A +MEKEK+YL L Sbjct: 182 YFVIKGTEKVILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCL 241 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDPRYS LLLPSIEEC S++TQ +ALEYL Sbjct: 242 NQFVKKIPIMVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYL 301 Query: 533 ENKVQRYQNNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNKD 354 + K E RAL ILRD FLAN+PVH+NNFRPKC+YVAVMLRRMMEA+LNKD Sbjct: 302 DGK------------ENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKD 349 Query: 353 TMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIGG 174 MDDKDYVGNKRLELSGQL++LLFEDLFKTM E R ++ VL++ +RS+RFD++Q I Sbjct: 350 AMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVR 409 Query: 173 ESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 ++ITNGLERTLSTGNFD+KRFKMHRKGMTQ + RLSYIA+LG MT++SPQFEKSRKV Sbjct: 410 DNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKV 466 >ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Capsella rubella] gi|482548616|gb|EOA12810.1| hypothetical protein CARUB_v10025768mg [Capsella rubella] Length = 1160 Score = 489 bits (1260), Expect = e-136 Identities = 244/357 (68%), Positives = 294/357 (82%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY++G+ K+ K +VLIGR+PIMLRSC CVL GKDE+ELA+ GECPLDPGG Sbjct: 117 PIHVNIEYVHGSHGEKQTSAKNNVLIGRMPIMLRSCRCVLNGKDEDELARLGECPLDPGG 176 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKGTEKV+L+QEQLSKNRIIID DKKG + A +MEKE+IYL L Sbjct: 177 YFVIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKERIYLFL 236 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 HQF KKIPI+IVLKAMGMESDQE+VQM+GRDPR+S LLPSIEECV V+TQ QAL+YL Sbjct: 237 HQFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYL 296 Query: 533 ENKVQRYQNNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNKD 354 E KV++ +K+GRAL ILRD FLA++PV +NNFR KC YV VMLRRM+EA+LNKD Sbjct: 297 EAKVKKTSYGPPLQKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKD 356 Query: 353 TMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIGG 174 MDDKDYVGNKRLELSGQL++LLFEDLFKTM EA +K++V+L++ +R++RFD SQ + G Sbjct: 357 AMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEAIKKVDVILTKQNRASRFDFSQCLSG 416 Query: 173 ESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 + I+ GLERTLSTGNFDIKRF+MHRKGMTQ + RLS+I +LGF+TKISPQFEKSRKV Sbjct: 417 DIISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKV 473 >ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis vinifera] Length = 1142 Score = 488 bits (1256), Expect = e-135 Identities = 249/361 (68%), Positives = 291/361 (80%), Gaps = 4/361 (1%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+ VNIEY+ G+ K K DV+IGR+PIMLRSCCCVLY KDE ELA+ GECPLDPGG Sbjct: 106 PILVNIEYITGSHVQKTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGG 165 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF++KGTEKVIL+QEQLSKNRIIID DKKG + A MEKEKI+L L Sbjct: 166 YFVVKGTEKVILIQEQLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQL 225 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QFT KIPIMIV+KAMGMESDQEVVQM+GR+PRYS LLLPS+EEC ++TQ QALE+L Sbjct: 226 NQFTSKIPIMIVMKAMGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFL 285 Query: 533 ENKVQRYQ-NNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV++ N EKEGR + ILRDTF+AN+PV +NNFRPKC+YVAVMLRRMM+AILNK Sbjct: 286 ERKVKKLPFYNPSLEKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNK 345 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQ--- 186 D MDDKDYVGNKRLELSGQL++LLFEDLFKTM E + ++ +L++ SRS+RFD SQ Sbjct: 346 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLR 405 Query: 185 LIGGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRK 6 I +SIT GLERTLSTGN+D+KRF+MHRKGM+Q VARLSYI +LG MTKISPQFEKSRK Sbjct: 406 FIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRK 465 Query: 5 V 3 V Sbjct: 466 V 466 >dbj|BAB11387.1| DNA-directed RNA polymerase subunit [Arabidopsis thaliana] Length = 1194 Score = 485 bits (1248), Expect = e-134 Identities = 245/360 (68%), Positives = 294/360 (81%), Gaps = 3/360 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY++G+ K K +V+IGR+PIMLRSC CVL+GKDEEELA+ GECPLDPGG Sbjct: 138 PIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGG 197 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YFIIKGTEKV+L+QEQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 198 YFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFL 257 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 H+F KKIPI+IVLKAMGMESDQE+VQM+GRDPR+S LLPSIEECV V+TQ QAL+YL Sbjct: 258 HRFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYL 317 Query: 533 ENKVQRYQNNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNKD 354 E KV++ T PEK+GRAL+ILRD FLA++PV +NNFR KC YV VMLRRM+EA+LNKD Sbjct: 318 EAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKD 377 Query: 353 TMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIGG 174 MDDKDYVGNKRLELSGQL++LLFEDLFKTM EA + ++ +L++ R++RFD SQ + Sbjct: 378 AMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNK 437 Query: 173 E---SITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 + SI+ GLERTLSTGNFDIKRF+MHRKGMTQ + RLS+I ++GF+TKISPQFEKSRKV Sbjct: 438 DSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKV 497 >ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana] gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana] Length = 1161 Score = 485 bits (1248), Expect = e-134 Identities = 245/360 (68%), Positives = 294/360 (81%), Gaps = 3/360 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY++G+ K K +V+IGR+PIMLRSC CVL+GKDEEELA+ GECPLDPGG Sbjct: 117 PIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGG 176 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YFIIKGTEKV+L+QEQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 177 YFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFL 236 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 H+F KKIPI+IVLKAMGMESDQE+VQM+GRDPR+S LLPSIEECV V+TQ QAL+YL Sbjct: 237 HRFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYL 296 Query: 533 ENKVQRYQNNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNKD 354 E KV++ T PEK+GRAL+ILRD FLA++PV +NNFR KC YV VMLRRM+EA+LNKD Sbjct: 297 EAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKD 356 Query: 353 TMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIGG 174 MDDKDYVGNKRLELSGQL++LLFEDLFKTM EA + ++ +L++ R++RFD SQ + Sbjct: 357 AMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNK 416 Query: 173 E---SITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 + SI+ GLERTLSTGNFDIKRF+MHRKGMTQ + RLS+I ++GF+TKISPQFEKSRKV Sbjct: 417 DSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKV 476 >ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum] gi|557099252|gb|ESQ39616.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum] Length = 1164 Score = 484 bits (1245), Expect = e-134 Identities = 245/360 (68%), Positives = 292/360 (81%), Gaps = 3/360 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P+YVNIEY +G+ + K +V+IGR+PIMLRSC CVL+GKDEEELA+ GECPLDPGG Sbjct: 117 PIYVNIEYAHGSHGKTQHSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGG 176 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKGTEKV+L+QEQLSKNRIIID DKKG + A +MEK KIYL L Sbjct: 177 YFVIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKGKIYLFL 236 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 HQF KKIPI+IVLKAMGMESDQE+VQM+GRDPR+S LLPSIEECV V+T+ QAL+YL Sbjct: 237 HQFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQALDYL 296 Query: 533 ENKVQRYQNNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNKD 354 E KV++ PEK+GRAL ILRD FLA++PV +NNFR KC YV VMLRRM+EA+LNKD Sbjct: 297 EAKVKKTSYGPPPEKDGRALYILRDVFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKD 356 Query: 353 TMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLIGG 174 MDDKDYVGNKRLELSGQL++LLFEDLFKTM EA +K++ +L + +R++RFD SQ + G Sbjct: 357 AMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEAVKKVDGILQKPNRASRFDFSQCLTG 416 Query: 173 E---SITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 E +I+ GLERTLSTGNFDIKRF+MHRKGMTQ + RLS+I +LGF+TKISPQFEKSRKV Sbjct: 417 EKNHNISFGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKV 476 >ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao] gi|508727716|gb|EOY19613.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao] Length = 1006 Score = 480 bits (1235), Expect = e-133 Identities = 247/359 (68%), Positives = 285/359 (79%), Gaps = 2/359 (0%) Frame = -1 Query: 1073 PVYVNIEYMNGNFDAKRVQIKKDVLIGRLPIMLRSCCCVLYGKDEEELAKYGECPLDPGG 894 P++VNIEY+ G+ K K D++IGR+PIMLRSCCCVLYGKDE ELA+ GECPLDPGG Sbjct: 124 PIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGG 183 Query: 893 YFIIKGTEKVILMQEQLSKNRIIIDIDKKGCVQAXXXXXXXXXXXXXXXKMEKEKIYLTL 714 YF+IKG EK EQLSKNRIIID DKKG + A +MEKEKIYL L Sbjct: 184 YFVIKGAEK-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLL 238 Query: 713 HQFTKKIPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEECVKGSVHTQYQALEYL 534 +QF KKIPIM+V+KAMGMESDQEVVQM+GRDP Y+ +LLPSIEEC ++TQ QALEYL Sbjct: 239 NQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYL 298 Query: 533 ENKVQRYQ-NNTRPEKEGRALNILRDTFLANIPVHENNFRPKCIYVAVMLRRMMEAILNK 357 E KV+R EKEGRAL+ILRD FLAN+PV NNFRPKC+YVAVMLRRM+EAILNK Sbjct: 299 ETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNK 358 Query: 356 DTMDDKDYVGNKRLELSGQLLALLFEDLFKTMNEEASRKMEVVLSRLSRSNRFDISQLI- 180 D MDDKDYVGNKRLELSGQL++LLFEDLFKT E + +++VLS+ SRS+ D SQ + Sbjct: 359 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLR 418 Query: 179 GGESITNGLERTLSTGNFDIKRFKMHRKGMTQAVARLSYIATLGFMTKISPQFEKSRKV 3 E+IT GLERTLSTGNFDIKRFKMHRKGMTQ +ARLS+I TLG+MTK+SPQFEKSRKV Sbjct: 419 SRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKV 477