BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00027801
         (383 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22111.1| hypothetical protein MIMGU_mgv1a000730mg [Mimulus...   117   2e-24
ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-li...    82   1e-13
ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-li...    82   1e-13
gb|EYU22987.1| hypothetical protein MIMGU_mgv1a0010611mg, partia...    75   1e-11
ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Popu...    75   1e-11
ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-li...    74   3e-11
ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Caps...    70   3e-10
gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]        69   9e-10
ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prun...    67   2e-09
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca...    67   3e-09
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...    66   4e-09
emb|CBI24290.3| unnamed protein product [Vitis vinifera]               66   4e-09
ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-li...    62   8e-08
ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citr...    62   8e-08
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi...    62   8e-08
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ...    62   1e-07
ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-li...    60   2e-07
ref|XP_007132512.1| hypothetical protein PHAVU_011G100500g [Phas...    60   3e-07
ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [A...    60   3e-07
ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-li...    59   7e-07

>gb|EYU22111.1| hypothetical protein MIMGU_mgv1a000730mg [Mimulus guttatus]
          Length = 1000

 Score =  117 bits (293), Expect = 2e-24
 Identities = 62/96 (64%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = +3

Query: 48  MSQDIRKWFINKHAKDKGNGDASKQAKPSTPEKPP--VVQGVNESSSRRKTSKYFAKDAQ 221
           MSQDIRKWF+ KH KD GNG AS QAKPSTPEK P  +V+ V E S RRKTSKYFAKD Q
Sbjct: 1   MSQDIRKWFMKKHEKDSGNGSASNQAKPSTPEKRPGKMVEEVQELSGRRKTSKYFAKDGQ 60

Query: 222 GVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 329
           GVKDEM+VE+   KK  T     +N KPP+ K+T K
Sbjct: 61  GVKDEMDVEEAPAKK--TAKELVSNVKPPTGKRTLK 94


>ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Solanum
           tuberosum]
          Length = 992

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQA---KPS--TPEKPPVVQGVNESSSRRKTSKYFAKDAQ 221
           DIRKWF+ +H K  GNG  SK +   KPS  +P+   +VQ   E+++RRKTSKYFA D  
Sbjct: 3   DIRKWFMKQHDKGTGNGSMSKNSAAEKPSLISPKPENLVQEGQETTNRRKTSKYFATDKV 62

Query: 222 GVKDEMEVEQVSEKKAQ-TGSTGSANAKPPSVKKTHK 329
             K+E   E  +++KAQ T  + SAN +PP+ KK HK
Sbjct: 63  KAKEEKVEEVSAKRKAQSTAGSSSANERPPAAKKIHK 99


>ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Solanum
           tuberosum]
          Length = 993

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQA---KPS--TPEKPPVVQGVNESSSRRKTSKYFAKDAQ 221
           DIRKWF+ +H K  GNG  SK +   KPS  +P+   +VQ   E+++RRKTSKYFA D  
Sbjct: 3   DIRKWFMKQHDKGTGNGSMSKNSAAEKPSLISPKPENLVQEGQETTNRRKTSKYFATDKV 62

Query: 222 GVKDEMEVEQVSEKKAQ-TGSTGSANAKPPSVKKTHK 329
             K+E   E  +++KAQ T  + SAN +PP+ KK HK
Sbjct: 63  KAKEEKVEEVSAKRKAQSTAGSSSANERPPAAKKIHK 99


>gb|EYU22987.1| hypothetical protein MIMGU_mgv1a0010611mg, partial [Mimulus
           guttatus]
          Length = 106

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
 Frame = +3

Query: 75  INKHAKDKGNGDASKQAKPSTPEKPPVV-------QGVNESSSRRKTSKYFAKDAQGVKD 233
           + KH KD GN  AS QAKPSTPEK P V       +      +  KTSKYFA D  GVKD
Sbjct: 1   MKKHEKDSGNSSASNQAKPSTPEKSPAVAPRPGKMKKFKNYLAEGKTSKYFATDGPGVKD 60

Query: 234 EMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 329
           +++VE+   KK  T     +N KPP+ K T K
Sbjct: 61  DVDVEEAPAKK--TAKELVSNVKPPTGKSTLK 90


>ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Populus trichocarpa]
           gi|550347876|gb|EEE82965.2| hypothetical protein
           POPTR_0001s22140g [Populus trichocarpa]
          Length = 981

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
 Frame = +3

Query: 48  MSQDIRKWFINKHAKDKGNGDASKQAK----PSTPEKPPVVQGVNESSSRRKTSKYFAKD 215
           M +DIRKWF+  H  DKGN +A+  A+    P+ P+    V G  E S RRKTSKYFA +
Sbjct: 1   MQRDIRKWFMKAH--DKGNDNAATNAEKKPPPTEPKTETPVCGGQEGSGRRKTSKYFAAN 58

Query: 216 AQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKKTHK 329
            Q  K++ E+E + +++KAQ  + G  + KPP  KK HK
Sbjct: 59  KQKQKEDKEIEDLPAKRKAQ--NDGVQSVKPPPSKKVHK 95


>ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-like [Solanum
           lycopersicum]
          Length = 1012

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQA-----KPSTPEKPPVVQGVNESSSRRKTSKYFAKDAQ 221
           DIRKWF+ +H K  GNG  SK +      P++P+   +VQ   E+++RRKTSKYFA D  
Sbjct: 3   DIRKWFMKQHDKGTGNGSMSKNSAAEKPSPTSPKPENLVQEGQETANRRKTSKYFATDKV 62

Query: 222 GVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 329
             K+E +VE+VS K+    + G ++A  P+ K+ HK
Sbjct: 63  KAKEE-KVEEVSAKRKAPNAAGISSA--PAAKRIHK 95


>ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Capsella rubella]
           gi|482555714|gb|EOA19906.1| hypothetical protein
           CARUB_v10000156mg [Capsella rubella]
          Length = 953

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQ------AKPSTPEKPPVVQGVNESSSRRKTSKYFAKDA 218
           DIRKWF+  H  DKGNG A K       A  + P KP       ++++RRKTSKYF KD 
Sbjct: 3   DIRKWFMKAH--DKGNGSAPKSTGAVKNAAETAPIKPEQASEDLDTAARRKTSKYFGKDK 60

Query: 219 QGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKK 320
             VKDE EVE++ +++K +T S   + A+P  V K
Sbjct: 61  TKVKDEKEVEELPAKRKLKTESDDLSKARPRKVTK 95


>gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]
          Length = 1047

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
 Frame = +3

Query: 48  MSQ-DIRKWFINKHAKDKGNGDASKQAKPST--PEKPPVVQGVNESSSRRKTSKYFAKDA 218
           MSQ DIRKWF+  H K  GN  ASK AK +   PE+P  VQG  ++S RRKTSKYF+  A
Sbjct: 85  MSQSDIRKWFMKSHEKGNGNS-ASKPAKSAQALPEEP--VQGSQDNSGRRKTSKYFS--A 139

Query: 219 QGVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 329
           +  KDE E+ +V  K+ +T +      KP   KK HK
Sbjct: 140 EKPKDEKEMVEVPVKR-KTQTDSHEMVKPSPAKKIHK 175


>ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
           gi|462394403|gb|EMJ00202.1| hypothetical protein
           PRUPE_ppa000922mg [Prunus persica]
          Length = 961

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/94 (42%), Positives = 48/94 (51%)
 Frame = +3

Query: 48  MSQDIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGVNESSSRRKTSKYFAKDAQGV 227
           M  DIRKWF+  H  DKGNG   K+  P+T + P  V G  E+  RRKTSKYF  D    
Sbjct: 1   MHADIRKWFMKSH--DKGNG---KKPAPTTSQTPSTVHGGQENPGRRKTSKYFTTDKPKA 55

Query: 228 KDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 329
           + E EV      K +T      + KP   KK HK
Sbjct: 56  EKETEV----PAKRKTHKEPDESVKPSPAKKVHK 85


>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
           gi|508727448|gb|EOY19345.1| Replication factor C subunit
           1 [Theobroma cacao]
          Length = 1012

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 39/87 (44%), Positives = 46/87 (52%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGVNESSSRRKTSKYFAKDAQGVKDE 236
           DIRKWF+  H  DKG G+ASK A P+ P     V G  E+S RRKTSKYF    Q  K E
Sbjct: 3   DIRKWFMKAH--DKGKGNASKPANPA-PTNTDSVPGGRENSGRRKTSKYFPAGKQQPKGE 59

Query: 237 MEVEQVSEKKAQTGSTGSANAKPPSVK 317
              E++  K+       S    PPS K
Sbjct: 60  QGTEELPAKRKVQNENESVEKPPPSKK 86


>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNG--------DASKQAKPS--TPEKPPVVQGVNESSSRRKTSKYF 206
           DIRKWF+ KH  D GN          AS+  KPS  T ++   V G  ESS RRKTSKYF
Sbjct: 7   DIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKYF 66

Query: 207 AKDAQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKKTHK 329
            K     KDE E+E++ +++K Q G+  S N  PP  KK  +
Sbjct: 67  QKP----KDEKEMEELPAKRKTQKGTKESLN--PPPSKKIRR 102


>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNG--------DASKQAKPS--TPEKPPVVQGVNESSSRRKTSKYF 206
           DIRKWF+ KH  D GN          AS+  KPS  T ++   V G  ESS RRKTSKYF
Sbjct: 7   DIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKYF 66

Query: 207 AKDAQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKKTHK 329
            K     KDE E+E++ +++K Q G+  S N  PP  KK  +
Sbjct: 67  QKP----KDEKEMEELPAKRKTQKGTKESLN--PPPSKKIRR 102


>ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Citrus
           sinensis] gi|568869228|ref|XP_006487830.1| PREDICTED:
           replication factor C subunit 1-like isoform X2 [Citrus
           sinensis]
          Length = 958

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 39/96 (40%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
 Frame = +3

Query: 48  MSQDIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGV--NESSSRRKTSKYFAKDAQ 221
           M QDIRKWF+  H+KDK N         S  E      G   +ES  RRKTSKYFA D Q
Sbjct: 1   MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSEPGCGGHESMGRRKTSKYFATDKQ 60

Query: 222 GVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 329
             +D  E E++  K+      G +    P +KK HK
Sbjct: 61  KPEDGGEKEELPAKRKAKKDDGKSVRSSP-LKKFHK 95


>ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citrus clementina]
           gi|557525989|gb|ESR37295.1| hypothetical protein
           CICLE_v10027762mg [Citrus clementina]
          Length = 958

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = +3

Query: 48  MSQDIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGV--NESSSRRKTSKYFAKDAQ 221
           M QDIRKWF+  H+KDK N         S  E      G   +ES  RRKTSKYFA D Q
Sbjct: 1   MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSEPGCGGHESMGRRKTSKYFATDKQ 60

Query: 222 GVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKKTHK 329
             +D  E E++ +++KA+     S  + P  +KK HK
Sbjct: 61  KPEDGGEKEELPAKRKAEKDDGKSVRSSP--LKKFHK 95


>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
           gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
           Full=Replication factor C subunit 1; Short=AtRFC1;
           AltName: Full=Activator 1 large subunit; AltName:
           Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
           replication factor C large subunit-like protein
           [Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
           At5g22010 [Arabidopsis thaliana]
           gi|332005585|gb|AED92968.1| replication factor C1
           [Arabidopsis thaliana]
          Length = 956

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQ----------AKPSTPEKPPVVQGVNESSSRRKTSKYF 206
           DIRKWF+  H  +KGNG A K           A  + P K        E++ RRKTSKYF
Sbjct: 3   DIRKWFMKAH--EKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYF 60

Query: 207 AKDAQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKK 320
            KD   VKDE EVE + +++K +T S      +P  V K
Sbjct: 61  GKDKTKVKDEKEVEAIPAKRKLKTESDDLVKPRPRKVTK 99


>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319877|gb|EFH50299.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 960

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQ----------AKPSTPEKPPVVQGVNESSSRRKTSKYF 206
           DIRKWF+  H  +KGN  A K           A  + P K        E+++RRKTSK+F
Sbjct: 3   DIRKWFMKAH--EKGNASAPKSTSSKAGPARNAAETAPLKSEQASEDLETAARRKTSKFF 60

Query: 207 AKDAQGVKDEMEVEQV-SEKKAQTGSTGSANAKPPSVKK 320
            KD   VKDE EVE++ +++K +T S   A  +P  V K
Sbjct: 61  GKDKTKVKDEKEVEEIPAKRKLKTDSDDLAKPRPRKVTK 99


>ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 938

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/70 (45%), Positives = 40/70 (57%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQAKPSTPEKPPVVQGVNESSSRRKTSKYFAKDAQGVKDE 236
           DIRKWF+  H  DKGN  AS +     P+    V G  ESS RR TSKYF  + Q  KDE
Sbjct: 3   DIRKWFMKTH--DKGNNAASSKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNKQKGKDE 60

Query: 237 MEVEQVSEKK 266
            E +++  K+
Sbjct: 61  KEKQELPAKR 70


>ref|XP_007132512.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
           gi|561005512|gb|ESW04506.1| hypothetical protein
           PHAVU_011G100500g [Phaseolus vulgaris]
          Length = 938

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDA----SKQAKPSTPEKPPV--VQGVNESSSRRKTSKYFAKDA 218
           DIRKWF+  H  DKGN  A    S Q KPS+ +  P   V G  ESS RR TSKYF  + 
Sbjct: 3   DIRKWFMKSH--DKGNNAAPSKPSNQPKPSSDKPQPEKNVAGGQESSGRRVTSKYFNTNK 60

Query: 219 QGVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 329
           Q VK+E E +++  K+     +       P  K+ H+
Sbjct: 61  QKVKEEKETQELPAKRKNVKDSEDT----PEPKRVHE 93


>ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [Amborella trichopoda]
           gi|548830733|gb|ERM93656.1| hypothetical protein
           AMTR_s00004p00160120 [Amborella trichopoda]
          Length = 725

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASKQAKPST----PEKPPVVQGVNESSSRRKTSKYFAKDAQG 224
           DIRKWF+ +H  DKGNG +S+ +KP+T    P KP  V    +  +RRKTSKYFA     
Sbjct: 3   DIRKWFMKQH--DKGNGASSQPSKPATTVSQPSKPSSVT-EEKKETRRKTSKYFATAPPE 59

Query: 225 VK--DEMEVEQVSE-----KKAQTGSTGSANAKPPSVKKTHK 329
            K  +E   E+ S      KK  T    S   KPP+ KK ++
Sbjct: 60  KKQGEEKNTEKSSPVKRKIKKVGTDEDYSDEIKPPTAKKINR 101


>ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Glycine
           max]
          Length = 947

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
 Frame = +3

Query: 57  DIRKWFINKHAKDKGNGDASK----QAKPST--PEKPPVVQGVNESSSRRKTSKYFAKDA 218
           DIRKWF+  H  DKGN  AS     Q KPS+  P+    V G  ESS RR TSKYF  + 
Sbjct: 3   DIRKWFMKTH--DKGNNAASSKPSNQPKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNK 60

Query: 219 QGVKDEMEVEQVSEKKAQTGSTGSANAKPPSVKKTHK 329
           Q  KD+ E++++  K+         + + P  KK H+
Sbjct: 61  QKGKDKKEMQELPAKRKNM----KDSEEIPEPKKIHE 93