BLASTX nr result

ID: Mentha28_contig00026949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00026949
         (584 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305118.2| hypothetical protein POPTR_0004s04780g [Popu...    60   4e-07
ref|XP_006388108.1| hypothetical protein POPTR_0335s00200g [Popu...    60   4e-07
ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241...    57   3e-06
ref|XP_006377407.1| hypothetical protein POPTR_0011s05630g [Popu...    57   4e-06

>ref|XP_002305118.2| hypothetical protein POPTR_0004s04780g [Populus trichocarpa]
           gi|550340340|gb|EEE85629.2| hypothetical protein
           POPTR_0004s04780g [Populus trichocarpa]
          Length = 225

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 34/66 (51%), Positives = 36/66 (54%)
 Frame = +2

Query: 185 NGWPLGLGSISTRITXXXXXXXXXXXSRLRRCXXXXXXXXXNLDTESTASFFPDQSVPLG 364
           NGWPLGL S   R+            S   R          NLDTESTASFF D+SVPLG
Sbjct: 10  NGWPLGLMSTRLRVMETIQAAPAEPYSLRIRSSSFSSFSSSNLDTESTASFFQDKSVPLG 69

Query: 365 RLIGIR 382
           RLIGIR
Sbjct: 70  RLIGIR 75


>ref|XP_006388108.1| hypothetical protein POPTR_0335s00200g [Populus trichocarpa]
           gi|550309496|gb|ERP47022.1| hypothetical protein
           POPTR_0335s00200g [Populus trichocarpa]
          Length = 225

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 34/66 (51%), Positives = 36/66 (54%)
 Frame = +2

Query: 185 NGWPLGLGSISTRITXXXXXXXXXXXSRLRRCXXXXXXXXXNLDTESTASFFPDQSVPLG 364
           NGWPLGL S   R+            S   R          NLDTESTASFF D+SVPLG
Sbjct: 10  NGWPLGLMSTRLRVMETIQAAPAEPYSLRIRSSSFSSFSSSNLDTESTASFFQDKSVPLG 69

Query: 365 RLIGIR 382
           RLIGIR
Sbjct: 70  RLIGIR 75


>ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241906 [Vitis vinifera]
           gi|297740424|emb|CBI30606.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 34/77 (44%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
 Frame = +2

Query: 158 VVMEVIDIPNGWPLGLGSISTRITXXXXXXXXXXXSRLRRCXXXXXXXXX--NLDTESTA 331
           +V E  ++P+GWPLGL  ++TR+                             NLDTESTA
Sbjct: 1   MVSEEQEMPSGWPLGLEIMNTRLRVAESLQASAVEPHTLHMPSTSFSSFSSSNLDTESTA 60

Query: 332 SFFPDQSVPLGRLIGIR 382
           SFF D SVPLGRLIGIR
Sbjct: 61  SFFQDHSVPLGRLIGIR 77


>ref|XP_006377407.1| hypothetical protein POPTR_0011s05630g [Populus trichocarpa]
           gi|550327696|gb|ERP55204.1| hypothetical protein
           POPTR_0011s05630g [Populus trichocarpa]
          Length = 140

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 32/66 (48%), Positives = 35/66 (53%)
 Frame = +2

Query: 185 NGWPLGLGSISTRITXXXXXXXXXXXSRLRRCXXXXXXXXXNLDTESTASFFPDQSVPLG 364
           NGWPLGL +   R+            S   R          NLDTES+ASFF D SVPLG
Sbjct: 10  NGWPLGLMNTRLRVMESIQAAPVEPYSLRIRSSSFSSFSSSNLDTESSASFFQDNSVPLG 69

Query: 365 RLIGIR 382
           RLIGIR
Sbjct: 70  RLIGIR 75


Top