BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00025462
         (1404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus...   397   e-108
gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlise...   348   4e-93
ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...   340   1e-90
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [...   338   3e-90
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   337   6e-90
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like...   336   2e-89
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr...   333   1e-88
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   333   1e-88
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   333   1e-88
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like...   332   2e-88
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr...   330   9e-88
ref|XP_007031141.1| Pseudouridine synthase family protein isofor...   329   2e-87
ref|XP_007031140.1| Pseudouridine synthase family protein isofor...   329   2e-87
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]           326   1e-86
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]           326   2e-86
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [...   326   2e-86
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   318   3e-84
ref|XP_003591214.1| Lon protease-like protein [Medicago truncatu...   318   5e-84
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]       315   2e-83
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian...   315   2e-83

>gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus guttatus]
          Length = 323

 Score =  397 bits (1019), Expect = e-108
 Identities = 210/326 (64%), Positives = 232/326 (71%), Gaps = 5/326 (1%)
 Frame = -1

Query: 1311 MATEDRTNSSPVQSENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRND 1132
            MA E R NS   Q ENAP +L +Y           SKNVE                 R D
Sbjct: 1    MAAESRLNSPNTQPENAPQSLQNYPVPLSPPPPLISKNVELNRALTASSKSSLFSLSRKD 60

Query: 1131 VLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 952
            VLFEDEWLIAVNKP GIYCE++LSSV+ L+++DQ         KLQELHLSNRLDRDTSG
Sbjct: 61   VLFEDEWLIAVNKPNGIYCETILSSVQILLNTDQ--------VKLQELHLSNRLDRDTSG 112

Query: 951  VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 772
            V ++TKSHKVAAKLVKAFT+HMVKKTYLA CVG+ PKW  +IIKSGHGRSKHGAWRVYA 
Sbjct: 113  VILITKSHKVAAKLVKAFTNHMVKKTYLASCVGTFPKWKNMIIKSGHGRSKHGAWRVYAY 172

Query: 771  SDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKN-----GXXXXXXXXXXXXXXXXX 607
            SD GR LPGGSFVRDMET F+VLSVNGK CS  S+ N                       
Sbjct: 173  SDVGRVLPGGSFVRDMETSFDVLSVNGKSCSQESDANHEEEEKIVAEEKSEVVGSCCSDE 232

Query: 606  XXEVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 427
              EV+VRA+PRSGRTHQIRLHCQYLGIPI GDVKY+GVYEWKDR YEGHELHAE+LSFEH
Sbjct: 233  RDEVVVRAHPRSGRTHQIRLHCQYLGIPIIGDVKYEGVYEWKDRTYEGHELHAETLSFEH 292

Query: 426  PVTGQSVLIHAPLPLWASEELAKVCL 349
            P+TGQSV I APLPLWAS+ LA+  L
Sbjct: 293  PITGQSVFIQAPLPLWASQALAQAQL 318


>gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlisea aurea]
          Length = 307

 Score =  348 bits (892), Expect = 4e-93
 Identities = 182/301 (60%), Positives = 213/301 (70%), Gaps = 1/301 (0%)
 Frame = -1

Query: 1269 ENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDEWLIAVNKP 1090
            ++A  TLG+Y           SK+VE                  NDVLFEDEWLIAVNKP
Sbjct: 15   KSAAETLGNYPAPLSPPPPPISKDVELSRALTASSSSALFSLSENDVLFEDEWLIAVNKP 74

Query: 1089 CGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAKL 910
             GIYCES+LSSVRT ++S     +P   A+ QELHLSNRLDRDTSGVT+VTKSHKVAAKL
Sbjct: 75   PGIYCESILSSVRTFLNS-----VP---ARTQELHLSNRLDRDTSGVTLVTKSHKVAAKL 126

Query: 909  VKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFVR 730
            VK FTDH V+KTY+A C+G+ P+   I++KSGHGRSKHGAWRVYA SD  R LPGGS +R
Sbjct: 127  VKTFTDHKVQKTYIASCIGTPPETHSILVKSGHGRSKHGAWRVYAFSDIARKLPGGSLIR 186

Query: 729  DMETYFEVLSVNGKGCSLGS-EKNGXXXXXXXXXXXXXXXXXXXEVLVRAYPRSGRTHQI 553
            +MET F+V++VNG+  S  S + +                    EV+VRAYP+SGRTHQI
Sbjct: 187  EMETLFQVIAVNGEKISSPSPDSDHQHIVVEAKSRISSDSDKASEVIVRAYPKSGRTHQI 246

Query: 552  RLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPLWAS 373
            RLHCQYLGIPIRGDVKYDGVYEW  R YE H+LHAESLSFEHPVTG S++I APLPLWA 
Sbjct: 247  RLHCQYLGIPIRGDVKYDGVYEWGGRKYECHQLHAESLSFEHPVTGHSLVIQAPLPLWAQ 306

Query: 372  E 370
            +
Sbjct: 307  Q 307


>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
            gi|462401230|gb|EMJ06787.1| hypothetical protein
            PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  340 bits (871), Expect = 1e-90
 Identities = 179/307 (58%), Positives = 209/307 (68%), Gaps = 4/307 (1%)
 Frame = -1

Query: 1272 SENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDEWLIAVNK 1093
            S+NA  T  +Y           SK++E                 R+DV+FED+WLI VNK
Sbjct: 12   SQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNK 71

Query: 1092 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 913
            P G+YCESVL SV  L+     S  P  Q    ELHL+NRLDRDTSG+ V+TKSHKVA+K
Sbjct: 72   PQGVYCESVLESVPQLLCDSAESGTPANQL---ELHLANRLDRDTSGLMVITKSHKVASK 128

Query: 912  LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 733
            LVKAFTDH + KTY+A C+GS PKW++I +KSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 129  LVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMV 188

Query: 732  RDMETYFEVLSVNGKGCSLGS----EKNGXXXXXXXXXXXXXXXXXXXEVLVRAYPRSGR 565
            RDMET FEVLS+NG+G SL      +K+                    E+LVRA PRSGR
Sbjct: 189  RDMETSFEVLSINGQG-SLKEPSEFKKDEANTIVVQEKAVIDKDTKKDEILVRARPRSGR 247

Query: 564  THQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLP 385
            THQIRLHCQYLGI IRGDVKY+GVYEWK R Y+GHELHAESLSFEHP+TG  V+  AP+P
Sbjct: 248  THQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVP 307

Query: 384  LWASEEL 364
             WAS+ L
Sbjct: 308  SWASQAL 314


>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
          Length = 308

 Score =  338 bits (867), Expect = 3e-90
 Identities = 170/258 (65%), Positives = 195/258 (75%), Gaps = 2/258 (0%)
 Frame = -1

Query: 1131 VLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 952
            V+FEDEW+IAVNKP GIYCESVLSS+  L++ D G       A + ELHL+NRLDRDTSG
Sbjct: 54   VIFEDEWIIAVNKPQGIYCESVLSSLPDLLN-DTG-------ANVSELHLANRLDRDTSG 105

Query: 951  VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 772
            V ++TK HKVAAK VKAFTDH V+KTYLA CVG  PKW+KI +KSGHGRSK+GAWRVYA 
Sbjct: 106  VMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAA 165

Query: 771  SDAGRTLPGGSFVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXE 598
            SDAGR LPGGS V+DMET FEVLSVNG GC   +                         E
Sbjct: 166  SDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDLHKDEDIVIVQEKSVIGCDLKKDE 225

Query: 597  VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 418
            +LVRA PRSGRTHQIRLHCQYLGIPIRGDV+Y+GVYEWK  +Y+ HELHAESLSFEHP+T
Sbjct: 226  ILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPIT 285

Query: 417  GQSVLIHAPLPLWASEEL 364
            G+S+L+ APLP WA + L
Sbjct: 286  GKSMLLQAPLPSWAIQPL 303


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 321

 Score =  337 bits (865), Expect = 6e-90
 Identities = 174/303 (57%), Positives = 208/303 (68%), Gaps = 4/303 (1%)
 Frame = -1

Query: 1272 SENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDEWLIAVNK 1093
            S+N P TL +Y           SK +E                 R+DVL+ED+WLIAVNK
Sbjct: 12   SQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNK 71

Query: 1092 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAK--LQELHLSNRLDRDTSGVTVVTKSHKVA 919
            P G+YCE+VL SV  ++++      P E A+    E HL+NRLDRDTSGV V+TKSHKVA
Sbjct: 72   PQGVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVA 131

Query: 918  AKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGS 739
            +KLVKAFTDH +KKTY+ALC+G  PKW+KI IKSGHGRSK G WRVYA SD G+TLPGGS
Sbjct: 132  SKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGS 191

Query: 738  FVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXEVLVRAYPRSGR 565
             V+DMET FE+LSVNG+G    L   +                     E+LVRA+P+SGR
Sbjct: 192  TVKDMETSFELLSVNGQGSFKELSEFEKDENILVVEEKAAKNADVKKVEILVRAFPQSGR 251

Query: 564  THQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLP 385
            THQIRLHCQYLGI IRGDVKY+GVYEW+ R Y+GHELHAE+LSFEHPVTG  V++ APLP
Sbjct: 252  THQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLP 311

Query: 384  LWA 376
             WA
Sbjct: 312  SWA 314


>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
          Length = 324

 Score =  336 bits (861), Expect = 2e-89
 Identities = 176/316 (55%), Positives = 211/316 (66%), Gaps = 8/316 (2%)
 Frame = -1

Query: 1293 TNSSPVQSENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDE 1114
            +N +   S+NAP T  +Y           SK++E                 R+DVL+EDE
Sbjct: 2    SNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDE 61

Query: 1113 WLIAVNKPCGIYCESVLSSVRTLMSSDQ-----GSVIPEEQAKLQELHLSNRLDRDTSGV 949
            WL+AVNKP G+YCESVL+SV  L++ D      G +    +  L ELHL+NRLDRDTSGV
Sbjct: 62   WLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGV 121

Query: 948  TVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAIS 769
             V+TKSHKVA+KLVKAFTDH V KTY+ALC+G  PKW +I I SGHGRSK GAWRVYA S
Sbjct: 122  MVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAAS 181

Query: 768  DAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXXXXXXE 598
            D GR LPGGS VRDM T FEVLSVNG+G        +++                    E
Sbjct: 182  DVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENNIVVEKKAVLDADAKKNE 241

Query: 597  VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 418
            +LVR +PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEW  + Y+GHELHAESLS EHP+T
Sbjct: 242  ILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHPIT 301

Query: 417  GQSVLIHAPLPLWASE 370
            G  V++ APLPLWA++
Sbjct: 302  GCPVMVQAPLPLWATQ 317


>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
            gi|567881937|ref|XP_006433527.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
            gi|557535648|gb|ESR46766.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
            gi|557535649|gb|ESR46767.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
          Length = 357

 Score =  333 bits (854), Expect = 1e-88
 Identities = 176/317 (55%), Positives = 208/317 (65%), Gaps = 8/317 (2%)
 Frame = -1

Query: 1290 NSSPVQSENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDEW 1111
            N +    ENAP    +Y           SK++E                 R+DVL+EDEW
Sbjct: 36   NPTEPTCENAPQIQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEW 95

Query: 1110 LIAVNKPCGIYCESVLSSVRTLMSSDQ-----GSVIPEEQAKLQELHLSNRLDRDTSGVT 946
             +AVNKP G+YCESVL+SV   ++ D      G +    +  L ELHL+NRLDRDTSGV 
Sbjct: 96   FVAVNKPQGVYCESVLASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVM 155

Query: 945  VVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISD 766
            V+TKSHKVA+KLVKAFTDH V KTY+ALC+G  PKW +I I SGHGRSK GAWRVYA SD
Sbjct: 156  VITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASD 215

Query: 765  AGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXXXXXXEV 595
             GR LPGGS VRDM T FEVLSVNG+G        +++                    E+
Sbjct: 216  VGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDADAKKNEI 275

Query: 594  LVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTG 415
            LVRA+PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEW  + Y+GHELHAESLSF+HPVTG
Sbjct: 276  LVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTG 335

Query: 414  QSVLIHAPLPLWASEEL 364
              V++ APLPLW +E L
Sbjct: 336  CPVMVQAPLPLWGTEAL 352


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
            [Cucumis sativus]
          Length = 366

 Score =  333 bits (854), Expect = 1e-88
 Identities = 175/313 (55%), Positives = 207/313 (66%), Gaps = 3/313 (0%)
 Frame = -1

Query: 1293 TNSSPVQSENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDE 1114
            T+SS   + N P T  +Y           SKN+E                  NDV++EDE
Sbjct: 40   TDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDE 99

Query: 1113 WLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 934
            WLIAVNKP GIYCE+VL++V  L+     + I   +  L ELHL+NRLDRDTSGV V+TK
Sbjct: 100  WLIAVNKPQGIYCENVLAAVPRLLGDSANAGI---KTSLPELHLANRLDRDTSGVMVITK 156

Query: 933  SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 754
            SHKVA+KLVKAFTDH V K+Y+A CVG+ PKW KI +KSGHGRSK G WRVYA +D GR+
Sbjct: 157  SHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRS 216

Query: 753  LPGGSFVRDMETYFEVLSVNGKGCSLGSEK---NGXXXXXXXXXXXXXXXXXXXEVLVRA 583
            LPGGS VRDMETYFEVLSVNGK      +K                        E+L+RA
Sbjct: 217  LPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRA 276

Query: 582  YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 403
             PRSGRTHQIRLHCQYLGIPIRGDVKY+GV EW +++Y+ HELHAESL F HPVTG  + 
Sbjct: 277  RPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLK 336

Query: 402  IHAPLPLWASEEL 364
            + APLP WAS+ L
Sbjct: 337  LQAPLPSWASQAL 349


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  333 bits (854), Expect = 1e-88
 Identities = 175/313 (55%), Positives = 207/313 (66%), Gaps = 3/313 (0%)
 Frame = -1

Query: 1293 TNSSPVQSENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDE 1114
            T+SS   + N P T  +Y           SKN+E                  NDV++EDE
Sbjct: 40   TDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDE 99

Query: 1113 WLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 934
            WLIAVNKP GIYCE+VL++V  L+     + I   +  L ELHL+NRLDRDTSGV V+TK
Sbjct: 100  WLIAVNKPQGIYCENVLAAVPRLLGDSANAGI---KTSLPELHLANRLDRDTSGVMVITK 156

Query: 933  SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 754
            SHKVA+KLVKAFTDH V K+Y+A CVG+ PKW KI +KSGHGRSK G WRVYA +D GR+
Sbjct: 157  SHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRS 216

Query: 753  LPGGSFVRDMETYFEVLSVNGKGCSLGSEK---NGXXXXXXXXXXXXXXXXXXXEVLVRA 583
            LPGGS VRDMETYFEVLSVNGK      +K                        E+L+RA
Sbjct: 217  LPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRA 276

Query: 582  YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 403
             PRSGRTHQIRLHCQYLGIPIRGDVKY+GV EW +++Y+ HELHAESL F HPVTG  + 
Sbjct: 277  RPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLK 336

Query: 402  IHAPLPLWASEEL 364
            + APLP WAS+ L
Sbjct: 337  LQAPLPSWASQAL 349


>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
          Length = 332

 Score =  332 bits (852), Expect = 2e-88
 Identities = 168/254 (66%), Positives = 191/254 (75%), Gaps = 2/254 (0%)
 Frame = -1

Query: 1131 VLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSG 952
            V+FEDEW+IAVNKP GIYCESVLSS+  L++ D G       A + ELHL+NRLDRDTSG
Sbjct: 84   VIFEDEWIIAVNKPQGIYCESVLSSLPDLLN-DTG-------ANVSELHLANRLDRDTSG 135

Query: 951  VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 772
            V ++TK HKVAAK VKAFTDH V+KTYLA CVG  PKW+KI +KSGHGRSK+GAWRVYA 
Sbjct: 136  VMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAA 195

Query: 771  SDAGRTLPGGSFVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXE 598
            SDAGR LPGGS V+DMET FEVLSVNG GC   +                         E
Sbjct: 196  SDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDFHKDEDVVIVQEKSVIGCDLKKDE 255

Query: 597  VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 418
            +LVRA PRSGRTHQIRLHCQYLGIPIRGDV+Y+GVYEWK   Y+ HELHAESLSFEHP+T
Sbjct: 256  ILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPIT 315

Query: 417  GQSVLIHAPLPLWA 376
            G+ +L+ APLP WA
Sbjct: 316  GKPMLLQAPLPSWA 329


>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
            gi|557088941|gb|ESQ29721.1| hypothetical protein
            EUTSA_v10023586mg [Eutrema salsugineum]
          Length = 333

 Score =  330 bits (846), Expect = 9e-88
 Identities = 161/255 (63%), Positives = 190/255 (74%)
 Frame = -1

Query: 1137 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDT 958
            NDVL+EDEWL+AVNKP GIYCESVLSS           VI +  +   E HL+NRLDRDT
Sbjct: 84   NDVLYEDEWLMAVNKPKGIYCESVLSSAP--------KVIVDSSSTANEFHLANRLDRDT 135

Query: 957  SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 778
            SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W KI ++SGHGRSKHGAWRVY
Sbjct: 136  SGVMLITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKITVRSGHGRSKHGAWRVY 195

Query: 777  AISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKNGXXXXXXXXXXXXXXXXXXXE 598
            A  D GR LPGGSFVRDMET FEV+SVNG+     +E                       
Sbjct: 196  AALDVGRVLPGGSFVRDMETTFEVVSVNGE----KTEPLEVESVIVVEGEPGLSCVGDDV 251

Query: 597  VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 418
            V+VRA+PRSGRTHQIRLHC+YLGIPIRGDVKY G+YEW+ R +EGHELHAESLSF+HPVT
Sbjct: 252  VVVRAFPRSGRTHQIRLHCRYLGIPIRGDVKYHGMYEWRGRTFEGHELHAESLSFDHPVT 311

Query: 417  GQSVLIHAPLPLWAS 373
            G+ ++I APLP W +
Sbjct: 312  GEPIVIRAPLPCWVA 326


>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719746|gb|EOY11643.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 313

 Score =  329 bits (844), Expect = 2e-87
 Identities = 169/263 (64%), Positives = 195/263 (74%), Gaps = 5/263 (1%)
 Frame = -1

Query: 1137 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGS--VIPEEQAKLQELHLSNRLDR 964
            +D+L+EDEWLIAVNKP GIYC+SVL+S+   +S    S  +    QA   ELHL+NRLDR
Sbjct: 46   SDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDR 105

Query: 963  DTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWR 784
            DTSG+ V+TKSHKVAA LVKAFT+HMV KTY+A C+GS PK ++I IKSGHGRSK GAWR
Sbjct: 106  DTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWR 165

Query: 783  VYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXX 613
            VYA  D GR LPGGS VRDM T FEVLS+NG+        S K+                
Sbjct: 166  VYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD 225

Query: 612  XXXXEVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSF 433
                E+LVRA+PRSGRTHQIRLHCQYLGIPIRGDVKY+GVYEWK R Y+ HELHAESLSF
Sbjct: 226  AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSF 285

Query: 432  EHPVTGQSVLIHAPLPLWASEEL 364
            +HPVTG  V+I APLPLWAS+ L
Sbjct: 286  QHPVTGFPVMIQAPLPLWASQAL 308


>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508719745|gb|EOY11642.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 345

 Score =  329 bits (844), Expect = 2e-87
 Identities = 169/263 (64%), Positives = 195/263 (74%), Gaps = 5/263 (1%)
 Frame = -1

Query: 1137 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGS--VIPEEQAKLQELHLSNRLDR 964
            +D+L+EDEWLIAVNKP GIYC+SVL+S+   +S    S  +    QA   ELHL+NRLDR
Sbjct: 78   SDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDR 137

Query: 963  DTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWR 784
            DTSG+ V+TKSHKVAA LVKAFT+HMV KTY+A C+GS PK ++I IKSGHGRSK GAWR
Sbjct: 138  DTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWR 197

Query: 783  VYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXX 613
            VYA  D GR LPGGS VRDM T FEVLS+NG+        S K+                
Sbjct: 198  VYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD 257

Query: 612  XXXXEVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSF 433
                E+LVRA+PRSGRTHQIRLHCQYLGIPIRGDVKY+GVYEWK R Y+ HELHAESLSF
Sbjct: 258  AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSF 317

Query: 432  EHPVTGQSVLIHAPLPLWASEEL 364
            +HPVTG  V+I APLPLWAS+ L
Sbjct: 318  QHPVTGFPVMIQAPLPLWASQAL 340


>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  326 bits (836), Expect = 1e-86
 Identities = 173/304 (56%), Positives = 202/304 (66%), Gaps = 3/304 (0%)
 Frame = -1

Query: 1272 SENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDEWLIAVNK 1093
            S+NA  T  +Y           SK+VE                 RND +FEDE L+AVNK
Sbjct: 12   SQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNK 71

Query: 1092 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 913
            P GIYCESV  SVR ++S        E +A   ELHL+NRLDRDTSG+ ++TKSHKVA+K
Sbjct: 72   PQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASK 131

Query: 912  LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 733
            LVKAFT H V KTY+A CVGS PKW+ I IKSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 132  LVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVV 191

Query: 732  RDMETYFEVLSVNGKGCSLGS---EKNGXXXXXXXXXXXXXXXXXXXEVLVRAYPRSGRT 562
            RDMET FEVLSVNG+  S       K+G                   E+LVRA P+SGR+
Sbjct: 192  RDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRS 251

Query: 561  HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 382
            HQIRLHCQYLGI +RGDVKY+GV +WK + Y GHELHAESLSFEHP+T   V++  PLP+
Sbjct: 252  HQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLPVVLSTPLPM 311

Query: 381  WASE 370
            WAS+
Sbjct: 312  WASQ 315


>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  326 bits (835), Expect = 2e-86
 Identities = 173/304 (56%), Positives = 202/304 (66%), Gaps = 3/304 (0%)
 Frame = -1

Query: 1272 SENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDEWLIAVNK 1093
            S+NA  T  +Y           SK+VE                 RND +FEDE L+AVNK
Sbjct: 12   SQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNK 71

Query: 1092 PCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 913
            P GIYCESV  SVR ++S        E +A   ELHL+NRLDRDTSG+ ++TKSHKVA+K
Sbjct: 72   PQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASK 131

Query: 912  LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 733
            LVKAFT H V KTY+A CVGS PKW+ I IKSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 132  LVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVV 191

Query: 732  RDMETYFEVLSVNGKGCSLGS---EKNGXXXXXXXXXXXXXXXXXXXEVLVRAYPRSGRT 562
            RDMET FEVLSVNG+  S       K+G                   E+LVRA P+SGR+
Sbjct: 192  RDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRS 251

Query: 561  HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 382
            HQIRLHCQYLGI +RGDVKY+GV +WK + Y GHELHAESLSFEHP+T   V++  PLP+
Sbjct: 252  HQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLLVVLSTPLPM 311

Query: 381  WASE 370
            WAS+
Sbjct: 312  WASQ 315


>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 347

 Score =  326 bits (835), Expect = 2e-86
 Identities = 170/312 (54%), Positives = 202/312 (64%), Gaps = 4/312 (1%)
 Frame = -1

Query: 1293 TNSSPVQSENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDE 1114
            T S    S+NA     +Y           SKN+E                 RNDV++ED+
Sbjct: 35   TMSDQPSSQNALQISQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQ 94

Query: 1113 WLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 934
            WLI VNKP GIYCE+VL SV  L++          + K  E+HL+NRLDRDTSGV ++TK
Sbjct: 95   WLIVVNKPQGIYCETVLESVPKLLAESG------LEGKAPEIHLANRLDRDTSGVMIITK 148

Query: 933  SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 754
            SHKVAAKLVKAFTDH V KTY+A C+GS PKW++I +KSGHGRSK GAWRVYA SD GR 
Sbjct: 149  SHKVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRP 208

Query: 753  LPGGSFVRDMETYFEVLSVNGKGCSLGSEK----NGXXXXXXXXXXXXXXXXXXXEVLVR 586
            LPGGS VRDMET FE+LS+NG+GC     +    +                    E+LV 
Sbjct: 209  LPGGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVI 268

Query: 585  AYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSV 406
            A PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEWK   Y GHELHAES+S +HP+TG  +
Sbjct: 269  ARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPI 328

Query: 405  LIHAPLPLWASE 370
            L  APLP WA++
Sbjct: 329  LFRAPLPSWANQ 340


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  318 bits (816), Expect = 3e-84
 Identities = 171/327 (52%), Positives = 209/327 (63%), Gaps = 3/327 (0%)
 Frame = -1

Query: 1335 MRTVGFALMATEDRTNSSPVQSENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXX 1156
            +R++G +L  T       P  S++AP  L +Y           SK++E            
Sbjct: 24   VRSLGASLPHTTMAEYIDP-NSKDAPQILTNYPKPISPPLPAISKHIEQSRAMSASSRSS 82

Query: 1155 XXXXXRNDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSN 976
                 R+D+LFED+WL+AVNKP G+YCE++L SV  ++    G          + LHL+N
Sbjct: 83   LFSLCRSDILFEDQWLMAVNKPQGVYCETILLSVSRMLDDSDG------HDSCRSLHLAN 136

Query: 975  RLDRDTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKH 796
            RLDRDTSGV V+TKSH+VAAKL+KAF+D  V KTYLALC+G+ P W+KI IKSGHGRSK 
Sbjct: 137  RLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSKF 196

Query: 795  GAWRVYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSL---GSEKNGXXXXXXXXXXX 625
            GAWRVYA SD GR LP    ++DM T FEVLSVNG+G       S K             
Sbjct: 197  GAWRVYAASDVGRALPNAPAIKDMVTSFEVLSVNGQGNVKELPESRKADETVLVVEERSV 256

Query: 624  XXXXXXXXEVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAE 445
                    E+LVRA+PRSGRTHQIRLHCQYLGI IRGDVKY+GV+EWK ++Y+GHELHAE
Sbjct: 257  IDSNARQDEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAE 316

Query: 444  SLSFEHPVTGQSVLIHAPLPLWASEEL 364
            SLSFEHPVTG  V   APLP WA + L
Sbjct: 317  SLSFEHPVTGVDVAFRAPLPSWAVQAL 343


>ref|XP_003591214.1| Lon protease-like protein [Medicago truncatula]
            gi|355480262|gb|AES61465.1| Lon protease-like protein
            [Medicago truncatula]
          Length = 1262

 Score =  318 bits (814), Expect = 5e-84
 Identities = 170/316 (53%), Positives = 205/316 (64%), Gaps = 5/316 (1%)
 Frame = -1

Query: 1290 NSSPVQSENAPPTLGHYXXXXXXXXXXXSKNVEXXXXXXXXXXXXXXXXXRNDVLFEDEW 1111
            +S P  SEN P  L +Y           SK +E                 +  +++EDE+
Sbjct: 2    SSPPHLSENTPTVLSNYPIPLSPQLPAISKQIELNRATIATSNSELFSLAQTHIIYEDEY 61

Query: 1110 LIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKS 931
            L+AVNKP GIYC++VL+S+++   S  GS          ELHL+NRLDRDTSGV ++TKS
Sbjct: 62   LLAVNKPQGIYCDNVLTSLQS--QSTVGS----------ELHLANRLDRDTSGVMLITKS 109

Query: 930  HKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTL 751
            HK+A+KLVKAFTD  VKKTY+A C G VP W  I +KSGHGRSK GAWRVY  SD+GR L
Sbjct: 110  HKIASKLVKAFTDREVKKTYIAFCTGRVPDWKTITVKSGHGRSKFGAWRVYGFSDSGRGL 169

Query: 750  PGGSFVRDMETYFEVLSVNGKG-----CSLGSEKNGXXXXXXXXXXXXXXXXXXXEVLVR 586
            PGGS VR+MET FE LSVNGKG       LG E+                     E++VR
Sbjct: 170  PGGSVVREMETSFEFLSVNGKGGFREVTELGFEEGN--VVVVEEKAVKMEGDDENEIVVR 227

Query: 585  AYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSV 406
            AYPRSGRTHQIRLHCQYLGI I GDVKY+GVYEWK RVY+GH LHAE+LSF+HPVTG  V
Sbjct: 228  AYPRSGRTHQIRLHCQYLGISIIGDVKYEGVYEWKGRVYDGHHLHAETLSFDHPVTGVRV 287

Query: 405  LIHAPLPLWASEELAK 358
            +  APLP WA++ L +
Sbjct: 288  MFRAPLPQWANQALLR 303



 Score =  101 bits (252), Expect = 7e-19
 Identities = 71/210 (33%), Positives = 97/210 (46%)
 Frame = -1

Query: 984  LSNRLDRDTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGR 805
            L + + R T  V ++ KSHKVA+KLVKAFTDH V+KTY++LC G  P W+ I ++S +GR
Sbjct: 927  LQSTIPRQTY-VMLIIKSHKVASKLVKAFTDHKVQKTYISLCTGQTPNWETITVRSCYGR 985

Query: 804  SKHGAWRVYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKNGXXXXXXXXXXX 625
            SK G  RVY             F+   E  FEV              +G           
Sbjct: 986  SKFGTRRVYV------------FLEVAELGFEV-------------SDG----------- 1009

Query: 624  XXXXXXXXEVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAE 445
                       V    ++ +   I+ HCQYLGI I GDVKY+G                 
Sbjct: 1010 -----------VVVEEKAVKMEGIQFHCQYLGISIIGDVKYEG----------------- 1041

Query: 444  SLSFEHPVTGQSVLIHAPLPLWASEELAKV 355
               F+H VTG  V++ A LP W ++ L+ +
Sbjct: 1042 ---FDHLVTGVRVMLCASLPQWVNQVLSNM 1068


>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
          Length = 293

 Score =  315 bits (808), Expect = 2e-83
 Identities = 154/258 (59%), Positives = 185/258 (71%), Gaps = 3/258 (1%)
 Frame = -1

Query: 1137 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDT 958
            +D+L+EDE+L+AVNKP G+YCE+VL S   ++                E HL+NRLDRDT
Sbjct: 46   DDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-----------EYHLANRLDRDT 94

Query: 957  SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 778
            SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W ++ + SGHGRSKHGAWRVY
Sbjct: 95   SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 154

Query: 777  AISDAGRTLPGGSFVRDMETYFEVLSVN---GKGCSLGSEKNGXXXXXXXXXXXXXXXXX 607
            A  D GR LPGGSFVRDMET FEV+SVN    + C L  + N                  
Sbjct: 155  AALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCEL-EDVNHVIVAEGERELSCGGDDD 213

Query: 606  XXEVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 427
               V+VRA+PRSGRTHQIRLHCQYLGIPIRGDVKY GVYEW  R +EGHELHAE LS +H
Sbjct: 214  DVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDH 273

Query: 426  PVTGQSVLIHAPLPLWAS 373
            PVTG S++I APLP WA+
Sbjct: 274  PVTGDSIVIRAPLPYWAA 291


>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
            gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
            pseudouridine synthase 1; AltName: Full=RNA
            pseudouridylate synthase 1; AltName: Full=RNA-uridine
            isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
            [Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
            [Arabidopsis thaliana]
          Length = 322

 Score =  315 bits (808), Expect = 2e-83
 Identities = 154/258 (59%), Positives = 185/258 (71%), Gaps = 3/258 (1%)
 Frame = -1

Query: 1137 NDVLFEDEWLIAVNKPCGIYCESVLSSVRTLMSSDQGSVIPEEQAKLQELHLSNRLDRDT 958
            +D+L+EDE+L+AVNKP G+YCE+VL S   ++                E HL+NRLDRDT
Sbjct: 75   DDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-----------EYHLANRLDRDT 123

Query: 957  SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 778
            SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W ++ + SGHGRSKHGAWRVY
Sbjct: 124  SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 183

Query: 777  AISDAGRTLPGGSFVRDMETYFEVLSVN---GKGCSLGSEKNGXXXXXXXXXXXXXXXXX 607
            A  D GR LPGGSFVRDMET FEV+SVN    + C L  + N                  
Sbjct: 184  AALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCEL-EDVNHVIVAEGERELSCGGDDD 242

Query: 606  XXEVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 427
               V+VRA+PRSGRTHQIRLHCQYLGIPIRGDVKY GVYEW  R +EGHELHAE LS +H
Sbjct: 243  DVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDH 302

Query: 426  PVTGQSVLIHAPLPLWAS 373
            PVTG S++I APLP WA+
Sbjct: 303  PVTGDSIVIRAPLPYWAA 320