BLASTX nr result

ID: Mentha28_contig00025121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00025121
         (597 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                74   4e-11
ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub...    64   6e-10
ref|XP_003590106.1| hypothetical protein MTR_1g044430 [Medicago ...    60   6e-09
ref|XP_007161871.1| hypothetical protein PHAVU_001G105000g [Phas...    47   1e-08
ref|XP_003593181.1| hypothetical protein MTR_2g008650 [Medicago ...    42   5e-08
gb|AAG51090.1|AC027032_10 hypothetical protein [Arabidopsis thal...    57   3e-06
gb|AAC62789.1| contains similarity to replication protein A1 [Ar...    57   4e-06
ref|XP_003609678.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    52   5e-06
ref|XP_006345613.1| PREDICTED: uncharacterized protein LOC102594...    56   9e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
 Frame = -1

Query: 573 SVVSMSSHSGLFDNNVDDDIGSGKLRLTTIKSLVEDKQVGKYWVYGKINVVTSRGDWCYI 394
           S+VSMS+ S     +  +D  SG++ + TI  + + K+ G +WV  KI  + S  DW Y+
Sbjct: 255 SIVSMSNMSY---GSAFEDFSSGQMNVFTISEIYQKKEYGDFWVAAKIVGIESSWDWFYV 311

Query: 393 SC--I*CAKKVSKVGDK*HCDKCNNSDANVSERYKLISIVADDTDEVPLLLWNKECIELV 220
           SC    C KK++       CDKC  +      RY++     D     P +LW+KEC EL+
Sbjct: 312 SCKSHGCNKKLTLRNTLYDCDKCKRTWQEGILRYRVKVRAVDLDGNAPFILWDKECTELL 371

Query: 219 G 217
           G
Sbjct: 372 G 372


>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355484558|gb|AES65761.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 549

 Score = 63.9 bits (154), Expect(2) = 6e-10
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = -1

Query: 495 LTTIKSLVEDKQVGKYWVYGKINVVTSRGDWCYISCI*CAKKVSKVGDK*HCDKCNNSDA 316
           +TT++ L +  +   + V+G +NV+    DW Y SC+ C KKV        C KCN    
Sbjct: 274 MTTVEGLKDCAEEKCFAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCNKHVL 333

Query: 315 NVSERYKLISIVADDTDEVPLLLWNKECIEL 223
           NV+ RY +   V D TD    +L++++  EL
Sbjct: 334 NVTPRYMIKMRVVDHTDSATFVLFDRDAAEL 364



 Score = 25.8 bits (55), Expect(2) = 6e-10
 Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -3

Query: 178 GNMISEMPFEITSLIDRELMFKIQVK--DDQRFGQPFNVVAICCDGDVISKYSGINKSFK 5
           G   SE+P +I +++++  +FK++        + + + V  +  D  ++ K+    K   
Sbjct: 379 GTDASEVPKDILAMVEKSYLFKVETNLGSSTMYEKSYRVKRVTADPVLVEKFQTKYKDLM 438

Query: 4   K 2
           K
Sbjct: 439 K 439


>ref|XP_003590106.1| hypothetical protein MTR_1g044430 [Medicago truncatula]
           gi|355479154|gb|AES60357.1| hypothetical protein
           MTR_1g044430 [Medicago truncatula]
          Length = 552

 Score = 60.5 bits (145), Expect(2) = 6e-09
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = -1

Query: 495 LTTIKSLVEDKQVGKYWVYGKINVVTSRGDWCYISCI*CAKKVSKVGDK*HCDKCNNSDA 316
           +TT++ L +  +   + V+G +NV+    DW Y SC+ C KKV        C KCN    
Sbjct: 192 MTTVEGLKDCAEEKFFAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCNKHVL 251

Query: 315 NVSERYKLISIVADDTDEVPLLLWNKECIEL 223
           NV+ RY +   V D TD    +L++++  EL
Sbjct: 252 NVTPRYMI--KVVDHTDSATFVLFDRDAAEL 280



 Score = 25.8 bits (55), Expect(2) = 6e-09
 Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -3

Query: 178 GNMISEMPFEITSLIDRELMFKIQVK--DDQRFGQPFNVVAICCDGDVISKYSGINKSFK 5
           G   SE+P +I +++++  +FK++        + + + V  +  D  ++ K+    K   
Sbjct: 295 GTDASEVPKDILAMVEKSYLFKVETNLGSSTMYEKSYRVKRVTADPVLVEKFQTKYKDLM 354

Query: 4   K 2
           K
Sbjct: 355 K 355


>ref|XP_007161871.1| hypothetical protein PHAVU_001G105000g [Phaseolus vulgaris]
           gi|561035335|gb|ESW33865.1| hypothetical protein
           PHAVU_001G105000g [Phaseolus vulgaris]
          Length = 405

 Score = 47.0 bits (110), Expect(2) = 1e-08
 Identities = 23/73 (31%), Positives = 36/73 (49%)
 Frame = -1

Query: 432 INVVTSRGDWCYISCI*CAKKVSKVGDK*HCDKCNNSDANVSERYKLISIVADDTDEVPL 253
           I  + +  DW Y +C+ C K V        C+KCN     V +RYKL   V D TD    
Sbjct: 195 IKHIVANDDWWYTACL-CGKVVYPDSKMFFCEKCNKHVIKVQQRYKLKVRVIDKTDSTTF 253

Query: 252 LLWNKECIELVGR 214
           +L++++   L+ +
Sbjct: 254 ILFDRDATTLINK 266



 Score = 38.5 bits (88), Expect(2) = 1e-08
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = -3

Query: 217 ETASELSEMYAKDGNMISEMPFEITSLIDRELMFKIQVKDDQ--RFGQPFNVVAICCDGD 44
           ++ +EL E + K+G+    +P E   LID+ ++FK+    DQ  RF Q F V  +C D  
Sbjct: 266 KSCAELFESHDKNGDS-GVLPKEFDLLIDKVVLFKVGCVKDQSLRFDQSFRVKKVCIDDT 324

Query: 43  VISKY 29
            I ++
Sbjct: 325 TIQRF 329


>ref|XP_003593181.1| hypothetical protein MTR_2g008650 [Medicago truncatula]
           gi|355482229|gb|AES63432.1| hypothetical protein
           MTR_2g008650 [Medicago truncatula]
          Length = 486

 Score = 42.0 bits (97), Expect(2) = 5e-08
 Identities = 25/79 (31%), Positives = 39/79 (49%)
 Frame = -1

Query: 450 YWVYGKINVVTSRGDWCYISCI*CAKKVSKVGDK*HCDKCNNSDANVSERYKLISIVADD 271
           Y V G I  + +R ++ Y +CI C+K V       +C+KC+     V  RY L     D 
Sbjct: 223 YVVLGTIKRIVNRENFWYTACI-CSKAVIPDSQMFYCEKCDRHVKKVFSRYCLRVRAIDH 281

Query: 270 TDEVPLLLWNKECIELVGR 214
           TD   L++++KE   L  +
Sbjct: 282 TDCATLVIFDKEATALFNK 300



 Score = 41.2 bits (95), Expect(2) = 5e-08
 Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = -3

Query: 196 EMYAKDGNMISE--MPFEITSLIDRELMFKIQVKDDQ--RFGQPFNVVAICCDGDVISKY 29
           +M A+ G  +SE  +P EI  +I +  +FK++ K DQ  RF Q F V  IC   DVI+++
Sbjct: 304 DMLAEHGVAVSEGHLPPEIAGIIGKTFLFKVETKVDQNPRFEQSFRVRKICAMPDVINEF 363


>gb|AAG51090.1|AC027032_10 hypothetical protein [Arabidopsis thaliana]
          Length = 567

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
 Frame = -1

Query: 489 TIKSLVEDKQVGKYWVYGKINVVTSRGDWCYISCI*CAKKVSKV----------GDK*H- 343
           TI++L+   +VGK  V   I  V +   W YISC  C KKV+ +          G K   
Sbjct: 260 TIENLLSSTEVGKVRVLCTIYAVDTDWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPRF 319

Query: 342 -CDKCNNSDANVSERYKLISIVADDTDEVPLLLWNKECIELVG 217
            CD C +   NV  RY + + V D T E  LLL++  C E++G
Sbjct: 320 WCDTCTSVVTNVVSRYMIYAKVMDSTGEAKLLLFDSICSEIIG 362


>gb|AAC62789.1| contains similarity to replication protein A1 [Arabidopsis
           thaliana] gi|10177641|dbj|BAB10788.1| replication
           protein A1-like [Arabidopsis thaliana]
          Length = 1073

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
 Frame = -1

Query: 489 TIKSLVEDKQVGKYWVYGKINVVTSRGDWCYISCI*CAKKVSKVG------------DK* 346
           TI+ L+   +VGK  V   I  + +   W YISC  C KKV+ +              K 
Sbjct: 249 TIEDLLSSTEVGKVRVLCTIYAIDTDWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPKF 308

Query: 345 HCDKCNNSDANVSERYKLISIVADDTDEVPLLLWNKECIELVG 217
            CD C +   NV  RY + + V D T E  L+L++  C E++G
Sbjct: 309 WCDTCKSVVTNVVSRYMIYAKVMDSTSEAKLVLFDSICFEIIG 351


>ref|XP_003609678.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510733|gb|AES91875.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 893

 Score = 51.6 bits (122), Expect(2) = 5e-06
 Identities = 28/91 (30%), Positives = 44/91 (48%)
 Frame = -1

Query: 495 LTTIKSLVEDKQVGKYWVYGKINVVTSRGDWCYISCI*CAKKVSKVGDK*HCDKCNNSDA 316
           +TT++ L +  +   + V+G +NV+    DW Y SC+ C KKV        C KCN    
Sbjct: 250 MTTVEGLKDCAEEKFFAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCN---- 305

Query: 315 NVSERYKLISIVADDTDEVPLLLWNKECIEL 223
                 K +  V D TD    +L++++  EL
Sbjct: 306 ------KYMIKVVDHTDSATFVLFDRDAAEL 330



 Score = 24.6 bits (52), Expect(2) = 5e-06
 Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -3

Query: 169 ISEMPFEITSLIDRELMFKIQVK--DDQRFGQPFNVVAICCDGDVISKYSGINKSFKK 2
           +SE+P +I +++++  +FK++        + + + V  +  D  ++ K+    K   K
Sbjct: 345 VSEVPKDILAMVEKSYLFKVETNLGSSTMYEKSYWVKRVTADPVLVEKFQTKYKDLMK 402


>ref|XP_006345613.1| PREDICTED: uncharacterized protein LOC102594974 [Solanum tuberosum]
          Length = 324

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 26/101 (25%), Positives = 48/101 (47%)
 Frame = -1

Query: 522 DDIGSGKLRLTTIKSLVEDKQVGKYWVYGKINVVTSRGDWCYISCI*CAKKVSKVGDK*H 343
           D++  G +    +  L++  +   YW+  K+  +     W + +C  C   V +V ++ +
Sbjct: 59  DELSKGIVPFKFLSDLIQCTEESAYWIAAKVVYLKIDHGWSHSACKKCLTVVDQVENRYY 118

Query: 342 CDKCNNSDANVSERYKLISIVADDTDEVPLLLWNKECIELV 220
           C KCN    ++  RY L   V D T  + LL  N+E  +L+
Sbjct: 119 CSKCNKEVISIIHRYNLQMYVTDGTAFISLLFLNREVFQLI 159


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