BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00025002
         (472 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCQ71611.1| RNA polymerase beta' subunit (chloroplast) [Salv...    64   2e-08
gb|AFV61805.1| RNA polymerase beta' subunit (chloroplast) [Origa...    64   2e-08
ref|YP_007507102.1| RNA polymerase beta' subunit (chloroplast) [...    64   2e-08
gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum]                   62   1e-07
ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum in...    62   1e-07
gb|ADD31164.1| RNA polymerase beta' subunit protein [Ehretia acu...    62   1e-07
gb|AFI55961.1| RNA polymerase beta subunit, partial (chloroplast...    61   1e-07
ref|YP_003359350.2| RNA polymerase beta I subunit (chloroplast) ...    61   1e-07
ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana su...    61   1e-07
ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea su...    61   1e-07
ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea su...    61   1e-07
gb|ADD72080.1| RNA polymerase beta subunit [Olea europaea]             61   1e-07
ref|YP_008964025.1| RNA polymerase beta' subunit 1 [Ajuga reptan...    61   2e-07
ref|YP_007353906.1| RNA polymerase beta' subunit (chloroplast) [...    60   2e-07
gb|AFI56057.1| RNA polymerase beta subunit, partial (chloroplast...    60   2e-07
gb|AFI56053.1| RNA polymerase beta subunit, partial (chloroplast...    60   2e-07
gb|AFI56047.1| RNA polymerase beta subunit, partial (chloroplast...    60   2e-07
gb|AFI56027.1| RNA polymerase beta subunit, partial (chloroplast...    60   2e-07
gb|AFI55979.1| RNA polymerase beta subunit, partial (chloroplast...    60   2e-07
gb|AFI55971.1| RNA polymerase beta subunit, partial (chloroplast...    60   2e-07

>emb|CCQ71611.1| RNA polymerase beta' subunit (chloroplast) [Salvia miltiorrhiza]
          Length = 682

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYGI 121
           +KEI+FLY+RT VGH SLY+EI+EAI+G SQACSYGI
Sbjct: 646 KKEILFLYIRTTVGHISLYREIEEAIQGFSQACSYGI 682


>gb|AFV61805.1| RNA polymerase beta' subunit (chloroplast) [Origanum vulgare subsp.
           vulgare]
          Length = 691

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYGI 121
           +KEI+FLY+RT VGH SLY+EI+EAI+G SQACSYGI
Sbjct: 655 KKEILFLYIRTTVGHISLYREIEEAIQGFSQACSYGI 691


>ref|YP_007507102.1| RNA polymerase beta' subunit (chloroplast) [Salvia miltiorrhiza]
           gi|401879733|gb|AFQ30920.1| RNA polymerase beta' subunit
           (chloroplast) [Salvia miltiorrhiza]
          Length = 691

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYGI 121
           +KEI+FLY+RT VGH SLY+EI+EAI+G SQACSYGI
Sbjct: 655 KKEILFLYIRTTVGHISLYREIEEAIQGFSQACSYGI 691


>gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum]
          Length = 687

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+F+Y+RT VGH SLY+EI+EAI+G SQACSYG
Sbjct: 651 KKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYG 686


>ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum indicum]
           gi|347448286|gb|AEO92697.1| RNA polymerase beta' subunit
           (chloroplast) [Sesamum indicum]
          Length = 691

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+F+Y+RT VGH SLY+EI+EAI+G SQACSYG
Sbjct: 655 KKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYG 690


>gb|ADD31164.1| RNA polymerase beta' subunit protein [Ehretia acuminata]
          Length = 687

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+F+Y+RT VGH SLY+EI+EAI+G SQACSYG
Sbjct: 651 KKEILFIYIRTTVGHISLYREIEEAIQGFSQACSYG 686


>gb|AFI55961.1| RNA polymerase beta subunit, partial (chloroplast) [Coffea
           tricalysioides]
          Length = 262

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEIIFLY+RT VGH SLY+EI+EAI+G S ACSYG
Sbjct: 226 KKEIIFLYIRTTVGHISLYREIEEAIQGFSHACSYG 261


>ref|YP_003359350.2| RNA polymerase beta I subunit (chloroplast) [Olea europaea]
           gi|363413082|gb|ADA69917.2| RNA polymerase beta I
           subunit (chloroplast) [Olea europaea]
          Length = 685

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+F+Y+RT VGH SLY+EI+EA++G SQACSYG
Sbjct: 646 KKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYG 681


>ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana subsp. woodiana]
           gi|334084650|emb|CBS29341.1| RNA polymerase beta' chain
           [Olea woodiana subsp. woodiana]
          Length = 690

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+F+Y+RT VGH SLY+EI+EA++G SQACSYG
Sbjct: 651 KKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYG 686


>ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea subsp. cuspidata]
           gi|334084392|emb|CBR23820.1| RNA polymerase beta' chain
           [Olea europaea subsp. cuspidata]
           gi|334084941|emb|CBJ04289.1| RNA polymerase beta' chain
           [Olea europaea subsp. cuspidata]
           gi|334085027|emb|CBR23729.1| RNA polymerase beta' chain
           [Olea europaea subsp. cuspidata]
          Length = 690

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+F+Y+RT VGH SLY+EI+EA++G SQACSYG
Sbjct: 651 KKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYG 686


>ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea subsp. europaea]
           gi|334701879|ref|YP_004564488.1| RNA polymerase beta'
           chain [Olea europaea subsp. maroccana]
           gi|328795424|emb|CBR30305.1| RNA polymerase beta' chain
           [Olea europaea subsp. europaea]
           gi|334084478|emb|CBR24611.1| RNA polymerase beta' chain
           [Olea europaea subsp. europaea]
           gi|334084564|emb|CBR30397.1| RNA polymerase beta' chain
           [Olea europaea subsp. europaea]
           gi|334084855|emb|CBS29228.1| RNA polymerase beta' chain
           [Olea europaea subsp. maroccana]
           gi|510934395|emb|CCQ09093.1| RNA polymerase beta' chain
           (chloroplast) [Olea europaea subsp. europaea]
          Length = 690

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+F+Y+RT VGH SLY+EI+EA++G SQACSYG
Sbjct: 651 KKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYG 686


>gb|ADD72080.1| RNA polymerase beta subunit [Olea europaea]
          Length = 683

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+F+Y+RT VGH SLY+EI+EA++G SQACSYG
Sbjct: 644 KKEILFIYIRTTVGHISLYREIEEAVQGFSQACSYG 679


>ref|YP_008964025.1| RNA polymerase beta' subunit 1 [Ajuga reptans]
           gi|558697184|gb|AHA84939.1| RNA polymerase beta' subunit
           1 [Ajuga reptans]
          Length = 680

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+FLY+RT VGH SLY+EI+EAI+G S+ACSYG
Sbjct: 644 KKEILFLYIRTTVGHISLYREIEEAIQGFSKACSYG 679


>ref|YP_007353906.1| RNA polymerase beta' subunit (chloroplast) [Tectona grandis]
           gi|438687595|emb|CCP47121.1| RNA polymerase beta'
           subunit (chloroplast) [Tectona grandis]
           gi|438688279|emb|CCP47210.1| RNA polymerase beta'
           subunit (chloroplast) [Tectona grandis]
           gi|438688403|emb|CCP47299.1| RNA polymerase beta'
           subunit (chloroplast) [Tectona grandis]
          Length = 684

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+FLY+RT VGH SLY+EI+EA++G S+ACSYG
Sbjct: 648 KKEILFLYIRTTVGHISLYREIEEAVQGFSRACSYG 683


>gb|AFI56057.1| RNA polymerase beta subunit, partial (chloroplast) [Coffea
           farafanganensis]
          Length = 262

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+FLY+RT VGH SLY+EI+EAI+G S ACSYG
Sbjct: 226 KKEILFLYIRTTVGHISLYREIEEAIQGFSHACSYG 261


>gb|AFI56053.1| RNA polymerase beta subunit, partial (chloroplast) [Coffea
           humblotiana]
          Length = 262

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+FLY+RT VGH SLY+EI+EAI+G S ACSYG
Sbjct: 226 KKEILFLYIRTTVGHISLYREIEEAIQGFSHACSYG 261


>gb|AFI56047.1| RNA polymerase beta subunit, partial (chloroplast) [Tricalysia
           perrieri]
          Length = 262

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+FLY+RT VGH SLY+EI+EAI+G S ACSYG
Sbjct: 226 KKEILFLYIRTTVGHISLYREIEEAIQGFSHACSYG 261


>gb|AFI56027.1| RNA polymerase beta subunit, partial (chloroplast) [Coffea
           canephora]
          Length = 260

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+FLY+RT VGH SLY+EI+EAI+G S ACSYG
Sbjct: 224 KKEILFLYIRTTVGHISLYREIEEAIQGFSHACSYG 259


>gb|AFI55979.1| RNA polymerase beta subunit, partial (chloroplast) [Coffea
           mauritiana]
          Length = 262

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+FLY+RT VGH SLY+EI+EAI+G S ACSYG
Sbjct: 226 KKEILFLYIRTTVGHISLYREIEEAIQGFSHACSYG 261


>gb|AFI55971.1| RNA polymerase beta subunit, partial (chloroplast) [Coffea
           jumellei] gi|385267882|gb|AFI56063.1| RNA polymerase
           beta subunit, partial (chloroplast) [Coffea jumellei]
          Length = 262

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 11  RKEIIFLYVRTIVGHFSLYQEIKEAIRGISQACSYG 118
           +KEI+FLY+RT VGH SLY+EI+EAI+G S ACSYG
Sbjct: 226 KKEILFLYIRTTVGHISLYREIEEAIQGFSHACSYG 261