BLASTX nr result

ID: Mentha28_contig00023435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00023435
         (445 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS59299.1| hypothetical protein M569_15509, partial [Genlise...    70   9e-23
gb|EPS64559.1| hypothetical protein M569_10222, partial [Genlise...    68   9e-20
ref|XP_006340741.1| PREDICTED: cold shock domain-containing prot...    50   5e-13
ref|XP_004232496.1| PREDICTED: DNA-binding protein HEXBP-like [S...    50   2e-12
ref|XP_004234533.1| PREDICTED: cold shock protein 1-like [Solanu...    50   1e-11
ref|XP_006343364.1| PREDICTED: cold shock domain-containing prot...    50   4e-11
ref|XP_002533802.1| cellular nucleic acid binding protein, putat...    53   4e-11
ref|XP_006383095.1| cold-shock DNA-binding family protein [Popul...    47   4e-10
ref|XP_007046686.1| Cold shock domain protein 1, putative [Theob...    47   5e-10
sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich protein 2 gi|1...    52   1e-09
ref|XP_006284948.1| hypothetical protein CARUB_v10006250mg [Caps...    48   2e-09
gb|AGV15831.1| cold shock domain protein 1 [Camelina sativa]           45   2e-09
ref|XP_006380594.1| cold-shock DNA-binding family protein [Popul...    44   3e-09
ref|XP_002305502.1| cold-shock DNA-binding family protein [Popul...    43   4e-09
ref|XP_006486858.1| PREDICTED: glycine-rich protein 2-like [Citr...    45   6e-09
gb|EXC35347.1| Glycine-rich protein 2 [Morus notabilis]                46   7e-09
ref|XP_004952095.1| PREDICTED: glycine-rich protein 2-like [Seta...    48   7e-09
ref|XP_002453214.1| hypothetical protein SORBIDRAFT_04g001720 [S...    48   1e-08
ref|XP_006425451.1| hypothetical protein CICLE_v10027474mg [Citr...    44   1e-08
ref|XP_006466955.1| PREDICTED: cold shock protein 1-like [Citrus...    44   1e-08

>gb|EPS59299.1| hypothetical protein M569_15509, partial [Genlisea aurea]
          Length = 200

 Score = 70.1 bits (170), Expect(2) = 9e-23
 Identities = 32/40 (80%), Positives = 37/40 (92%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPVD 75
           I S  YRTLREGQEVEFT+I++G+KTKAT+VTAPGGGPVD
Sbjct: 39  IKSDGYRTLREGQEVEFTIILDGDKTKATEVTAPGGGPVD 78



 Score = 62.4 bits (150), Expect(2) = 9e-23
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = -2

Query: 285 EEKAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           EEK  RSKGVVTKFNDQKGYGFIQP++G +DLFV
Sbjct: 1   EEKLTRSKGVVTKFNDQKGYGFIQPDEGGDDLFV 34


>gb|EPS64559.1| hypothetical protein M569_10222, partial [Genlisea aurea]
          Length = 184

 Score = 67.8 bits (164), Expect(2) = 9e-20
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPVDT 72
           I S  +R LREGQEVEFTV+++GEKTKATDVTAPGGG VDT
Sbjct: 36  IKSDGFRKLREGQEVEFTVVLDGEKTKATDVTAPGGGSVDT 76



 Score = 54.7 bits (130), Expect(2) = 9e-20
 Identities = 23/29 (79%), Positives = 28/29 (96%)
 Frame = -2

Query: 270 RSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           RSKGVVT+FNDQKGYGFIQP++G ++LFV
Sbjct: 3   RSKGVVTRFNDQKGYGFIQPDEGGDELFV 31


>ref|XP_006340741.1| PREDICTED: cold shock domain-containing protein 3-like [Solanum
           tuberosum]
          Length = 261

 Score = 50.4 bits (119), Expect(2) = 5e-13
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = -3

Query: 197 KICSSXYRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPVDT 72
           +I S  YR+L EGQ+VEFT+ V+G+K +A DVT P G P+D+
Sbjct: 39  EIKSDGYRSLYEGQKVEFTMTVKGDKYQAIDVTGPDGAPLDS 80



 Score = 49.3 bits (116), Expect(2) = 5e-13
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = -2

Query: 279 KAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           +A R  G V+KFN+ KGYGFI+P+DG+EDLFV
Sbjct: 4   EASRMTGTVSKFNNPKGYGFIKPDDGSEDLFV 35


>ref|XP_004232496.1| PREDICTED: DNA-binding protein HEXBP-like [Solanum lycopersicum]
          Length = 260

 Score = 50.4 bits (119), Expect(2) = 2e-12
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = -3

Query: 197 KICSSXYRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPVDT 72
           +I S  YR+L EGQ+VEFT+ V+G+K +A DVT P G P+D+
Sbjct: 39  EIKSDGYRSLYEGQKVEFTMTVKGDKYQAIDVTGPDGAPLDS 80



 Score = 47.4 bits (111), Expect(2) = 2e-12
 Identities = 20/32 (62%), Positives = 27/32 (84%)
 Frame = -2

Query: 279 KAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           +A R  G V+KF++ KGYGFI+P+DG+EDLFV
Sbjct: 4   EASRMTGTVSKFSNPKGYGFIKPDDGSEDLFV 35


>ref|XP_004234533.1| PREDICTED: cold shock protein 1-like [Solanum lycopersicum]
          Length = 288

 Score = 50.1 bits (118), Expect(2) = 1e-11
 Identities = 21/29 (72%), Positives = 27/29 (93%)
 Frame = -2

Query: 270 RSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           R  GVV++F++QKGYGFI+P+DGTEDLFV
Sbjct: 7   RLTGVVSRFSNQKGYGFIKPDDGTEDLFV 35



 Score = 44.7 bits (104), Expect(2) = 1e-11
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = -3

Query: 197 KICSSXYRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPVD 75
           +I S  +R+L EGQ+VEF V   G+K +A DVT P G P+D
Sbjct: 39  EIKSEGFRSLYEGQKVEFMVTGNGDKYQAVDVTGPDGAPLD 79


>ref|XP_006343364.1| PREDICTED: cold shock domain-containing protein 3-like [Solanum
           tuberosum]
          Length = 300

 Score = 50.1 bits (118), Expect(2) = 4e-11
 Identities = 21/29 (72%), Positives = 27/29 (93%)
 Frame = -2

Query: 270 RSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           R  GVV++F++QKGYGFI+P+DGTEDLFV
Sbjct: 7   RLTGVVSRFSNQKGYGFIKPDDGTEDLFV 35



 Score = 43.1 bits (100), Expect(2) = 4e-11
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = -3

Query: 197 KICSSXYRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPVD 75
           +I S  +R+L EGQ+VEF V   G+K +A +VT P G P+D
Sbjct: 39  EIKSEGFRSLYEGQKVEFMVTGNGDKYQAVEVTGPDGAPLD 79


>ref|XP_002533802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
           gi|223526275|gb|EEF28589.1| cellular nucleic acid
           binding protein, putative [Ricinus communis]
          Length = 266

 Score = 52.8 bits (125), Expect(2) = 4e-11
 Identities = 24/38 (63%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = -2

Query: 294 SMAEEKA-IRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           SMAEE+  +RS+G V +F+D+KG+GFI+P+DG EDLFV
Sbjct: 4   SMAEEQTGVRSRGKVVRFSDRKGFGFIKPDDGGEDLFV 41



 Score = 40.4 bits (93), Expect(2) = 4e-11
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = -3

Query: 179 YRTLREGQEVEFTV-IVEGEKTKATDVTAPGGGPV 78
           YR+L E   VEFTV + +  K +A DVTAPGGGP+
Sbjct: 52  YRSLAEDDVVEFTVSLSDDNKYQAVDVTAPGGGPI 86


>ref|XP_006383095.1| cold-shock DNA-binding family protein [Populus trichocarpa]
           gi|550338672|gb|ERP60892.1| cold-shock DNA-binding
           family protein [Populus trichocarpa]
          Length = 235

 Score = 47.0 bits (110), Expect(2) = 4e-10
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = -3

Query: 179 YRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPV 78
           YRTL E   VEFT+++  +K +A DVTAPGGGP+
Sbjct: 52  YRTLYEDDVVEFTILLNDDKYQAVDVTAPGGGPI 85



 Score = 42.7 bits (99), Expect(2) = 4e-10
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = -2

Query: 291 MAEEKAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           +A  K  RS G V +F+D+KG+GFI+P+ G +DLFV
Sbjct: 6   VAATKEERSTGRVVRFSDKKGFGFIKPDAGDKDLFV 41


>ref|XP_007046686.1| Cold shock domain protein 1, putative [Theobroma cacao]
           gi|508698947|gb|EOX90843.1| Cold shock domain protein 1,
           putative [Theobroma cacao]
          Length = 249

 Score = 47.0 bits (110), Expect(2) = 5e-10
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = -2

Query: 285 EEKAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           E++  RS G V  FNDQKG+GFI+P+D +EDLFV
Sbjct: 7   EQQQSRSAGKVLWFNDQKGFGFIRPDDESEDLFV 40



 Score = 42.4 bits (98), Expect(2) = 5e-10
 Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIV-EGEKTKATDVTAPGGGPV 78
           I S  YR+L EG+ VEFTV    G KT+A DVTA GG P+
Sbjct: 45  IKSDGYRSLAEGESVEFTVSQGNGGKTQAVDVTAIGGSPI 84


>sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich protein 2 gi|19743|emb|CAA42622.1|
           nsGRP-2 [Nicotiana sylvestris]
          Length = 214

 Score = 52.4 bits (124), Expect(2) = 1e-09
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = -2

Query: 291 MAEEKAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           MAEE   R+KG V  F+DQKG+GFI P+DG EDLFV
Sbjct: 1   MAEESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFV 36



 Score = 35.8 bits (81), Expect(2) = 1e-09
 Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGE-KTKATDVTAPGGGPV 78
           I S  +R+L EG+ VEF V   G+ +TKA DVT P G  V
Sbjct: 41  IRSEGFRSLAEGETVEFEVESGGDGRTKAVDVTGPDGAAV 80


>ref|XP_006284948.1| hypothetical protein CARUB_v10006250mg [Capsella rubella]
           gi|482553653|gb|EOA17846.1| hypothetical protein
           CARUB_v10006250mg [Capsella rubella]
          Length = 262

 Score = 48.1 bits (113), Expect(2) = 2e-09
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = -2

Query: 291 MAEEKAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           MA E A RS G V  FND KGYGFI P++G ++LFV
Sbjct: 1   MASESAARSTGKVNWFNDTKGYGFIAPDEGGDELFV 36



 Score = 39.7 bits (91), Expect(2) = 2e-09
 Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGE-KTKATDVTAPGGGPV 78
           I S  YR+L     VEF++    + KTKA DVTAPGGGP+
Sbjct: 41  IVSEGYRSLAVDDLVEFSITQGSDGKTKAVDVTAPGGGPL 80


>gb|AGV15831.1| cold shock domain protein 1 [Camelina sativa]
          Length = 258

 Score = 44.7 bits (104), Expect(2) = 2e-09
 Identities = 25/41 (60%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGE--KTKATDVTAPGGGPV 78
           I S  +R+L  G  VEFTV  EG   KTKA DVTAPGGGP+
Sbjct: 43  IASDGFRSLTVGDSVEFTV-AEGSDGKTKAVDVTAPGGGPL 82



 Score = 42.7 bits (99), Expect(2) = 2e-09
 Identities = 17/34 (50%), Positives = 26/34 (76%)
 Frame = -2

Query: 285 EEKAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           ++  +RS G V+ F+D KGYGF+ P+DG+ +LFV
Sbjct: 5   DQSVVRSTGKVSWFSDIKGYGFVTPDDGSVELFV 38


>ref|XP_006380594.1| cold-shock DNA-binding family protein [Populus trichocarpa]
           gi|550334484|gb|ERP58391.1| cold-shock DNA-binding
           family protein [Populus trichocarpa]
          Length = 243

 Score = 44.3 bits (103), Expect(2) = 3e-09
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = -3

Query: 179 YRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPV 78
           YRTL E   VEFT+++  +K +A +VTAPGGGP+
Sbjct: 59  YRTLYEDDVVEFTILLTEDKYQAIEVTAPGGGPI 92



 Score = 42.7 bits (99), Expect(2) = 3e-09
 Identities = 19/38 (50%), Positives = 28/38 (73%)
 Frame = -2

Query: 297 SSMAEEKAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           + +A  K  RS G V +F+D+KG+GFI+P+ G +DLFV
Sbjct: 11  ADVAATKEERSTGRVVRFSDKKGFGFIKPDVGDKDLFV 48


>ref|XP_002305502.1| cold-shock DNA-binding family protein [Populus trichocarpa]
           gi|222848466|gb|EEE86013.1| cold-shock DNA-binding
           family protein [Populus trichocarpa]
          Length = 207

 Score = 43.1 bits (100), Expect(2) = 4e-09
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -2

Query: 270 RSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           R  G V  F+DQKG+GFI P+DG++DLFV
Sbjct: 4   RQTGKVKWFSDQKGFGFISPDDGSDDLFV 32



 Score = 43.1 bits (100), Expect(2) = 4e-09
 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGE-KTKATDVTAPGGGPV 78
           I S  YR+L +G+EVEF +    + +TKA DVTAPGG PV
Sbjct: 37  IKSEGYRSLGDGEEVEFVIENSDDGRTKAVDVTAPGGNPV 76


>ref|XP_006486858.1| PREDICTED: glycine-rich protein 2-like [Citrus sinensis]
          Length = 137

 Score = 45.1 bits (105), Expect(2) = 6e-09
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = -3

Query: 179 YRTLREGQEVEFTVIVEGEKTKATDVTAPGGGPV 78
           +R+L EG+EVEF +  +G +TKA DVT P G PV
Sbjct: 43  FRSLGEGEEVEFVIESDGSRTKAADVTGPNGNPV 76



 Score = 40.8 bits (94), Expect(2) = 6e-09
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -2

Query: 270 RSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           R  G V  F+DQKG+GFI P+DG ED+FV
Sbjct: 5   RVTGKVKWFSDQKGFGFITPDDGGEDVFV 33


>gb|EXC35347.1| Glycine-rich protein 2 [Morus notabilis]
          Length = 258

 Score = 46.2 bits (108), Expect(2) = 7e-09
 Identities = 24/36 (66%), Positives = 26/36 (72%)
 Frame = -2

Query: 291 MAEEKAIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           MAEE   RS G V  FND KG+GFI P+DG EDLFV
Sbjct: 1   MAEE---RSTGKVRWFNDSKGFGFITPDDGGEDLFV 33



 Score = 39.3 bits (90), Expect(2) = 7e-09
 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTV-IVEGEKTKATDVTAPGGGPVDTT 69
           I S  +R+L EG  VEF + I +  KTKA DVT PGG  +  T
Sbjct: 38  IKSDGFRSLAEGDTVEFQIAIADDGKTKAVDVTGPGGSSLQGT 80


>ref|XP_004952095.1| PREDICTED: glycine-rich protein 2-like [Setaria italica]
          Length = 247

 Score = 48.1 bits (113), Expect(2) = 7e-09
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = -2

Query: 276 AIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           A R +G V  FND KG+GFI PEDG+EDLFV
Sbjct: 4   AARQRGTVKWFNDTKGFGFISPEDGSEDLFV 34



 Score = 37.4 bits (85), Expect(2) = 7e-09
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGE--KTKATDVTAPGG 87
           I S  +R+L EG+EVEF+V  EG+  +TKA DVT P G
Sbjct: 39  IKSEGFRSLAEGEEVEFSV-TEGDDGRTKAVDVTGPDG 75


>ref|XP_002453214.1| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor]
           gi|241933045|gb|EES06190.1| hypothetical protein
           SORBIDRAFT_04g001720 [Sorghum bicolor]
          Length = 251

 Score = 48.1 bits (113), Expect(2) = 1e-08
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = -2

Query: 276 AIRSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           A R +G V  FND KG+GFI PEDG+EDLFV
Sbjct: 4   AARQRGTVKWFNDTKGFGFISPEDGSEDLFV 34



 Score = 37.0 bits (84), Expect(2) = 1e-08
 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGE--KTKATDVTAPGGGPV 78
           I S  +R+L EG+EVEF+V  EG+  +TKA DVT P G  V
Sbjct: 39  IKSEGFRSLAEGEEVEFSV-SEGDDGRTKAVDVTGPDGSYV 78


>ref|XP_006425451.1| hypothetical protein CICLE_v10027474mg [Citrus clementina]
           gi|557527441|gb|ESR38691.1| hypothetical protein
           CICLE_v10027474mg [Citrus clementina]
          Length = 264

 Score = 43.5 bits (101), Expect(2) = 1e-08
 Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGE-KTKATDVTAPGGGPVDTT 69
           I S  YRTL E Q VEF V +E + K +A DVTAPGG PV ++
Sbjct: 39  IKSDGYRTLYENQSVEFDVQLEADGKYQALDVTAPGGAPVHSS 81



 Score = 41.6 bits (96), Expect(2) = 1e-08
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -2

Query: 270 RSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           RS G VT F+  KGYGFI+P+DG  DLFV
Sbjct: 6   RSTGKVTWFDGAKGYGFIRPDDGGADLFV 34


>ref|XP_006466955.1| PREDICTED: cold shock protein 1-like [Citrus sinensis]
          Length = 258

 Score = 43.5 bits (101), Expect(2) = 1e-08
 Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -3

Query: 194 ICSSXYRTLREGQEVEFTVIVEGE-KTKATDVTAPGGGPVDTT 69
           I S  YRTL E Q VEF V +E + K +A DVTAPGG PV ++
Sbjct: 39  IKSDGYRTLYENQSVEFDVQLEADGKYQALDVTAPGGAPVHSS 81



 Score = 41.6 bits (96), Expect(2) = 1e-08
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -2

Query: 270 RSKGVVTKFNDQKGYGFIQPEDGTEDLFV 184
           RS G VT F+  KGYGFI+P+DG  DLFV
Sbjct: 6   RSTGKVTWFDGAKGYGFIRPDDGGADLFV 34


Top