BLASTX nr result
ID: Mentha28_contig00023128
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha28_contig00023128 (368 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU45593.1| hypothetical protein MIMGU_mgv1a012297mg [Mimulus... 65 1e-08 ref|XP_007035427.1| SC35-like splicing factor 28 isoform 2 [Theo... 57 3e-06 >gb|EYU45593.1| hypothetical protein MIMGU_mgv1a012297mg [Mimulus guttatus] Length = 254 Score = 64.7 bits (156), Expect = 1e-08 Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Frame = +2 Query: 5 RHDSRDRGYGASDGRYSGHRSRSMSRSASPKVE---XXXXXXXXXXXXXXXXXXPQDEEM 175 RH+SR +GYGA D +S RSRS+SRS SP+ E P DE+ Sbjct: 157 RHESRGKGYGARDDYHSPRRSRSISRSVSPRNERNHRSREKPTRRSRSFSRSVSPLDEKN 216 Query: 176 HRPSVRSPSPRENGRGGYGSRSQSPRRNSMSPVGRR*RS 292 HR RS +P+EN RS+SP+RNS SP R RS Sbjct: 217 HRQIRRSTNPKEN-----APRSRSPKRNSRSPSRSRSRS 250 >ref|XP_007035427.1| SC35-like splicing factor 28 isoform 2 [Theobroma cacao] gi|508714456|gb|EOY06353.1| SC35-like splicing factor 28 isoform 2 [Theobroma cacao] Length = 291 Score = 56.6 bits (135), Expect = 3e-06 Identities = 42/119 (35%), Positives = 50/119 (42%), Gaps = 23/119 (19%) Frame = +2 Query: 5 RHDSRDRGY-----------------GASDGRYSGHRSRSMSRSASPKVEXXXXXXXXXX 133 RHDSRDRG G D S RSRS+SR K + Sbjct: 169 RHDSRDRGVRDDYRSLRRSRSISQDRGMRDDYRSTSRSRSISRDHGAKDDYCSPRRSRSV 228 Query: 134 XXXXXXXXPQDEEMHRPSVRSPSPRENGRGGYGSR------SQSPRRNSMSPVGRR*RS 292 P + +R RSPSPRENGR + R S+SPRR+S+SP R RS Sbjct: 229 SRSLSARSPHGDREYRTKPRSPSPRENGRSSHDERRYAHGQSRSPRRDSLSPSRSRSRS 287