BLASTX nr result
ID: Mentha28_contig00020456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00020456
(620 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei... 89 1e-15
gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis] 80 5e-13
ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protei... 80 5e-13
ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protei... 80 5e-13
ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citr... 79 1e-12
ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protei... 78 2e-12
ref|XP_002533105.1| cold-inducible RNA binding protein, putative... 73 8e-11
ref|NP_200794.1| RNA recognition motif-containing protein [Arabi... 70 4e-10
dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana] 70 4e-10
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp.... 70 4e-10
ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arab... 69 9e-10
ref|XP_006279867.1| hypothetical protein CARUB_v10028559mg [Caps... 69 1e-09
ref|XP_004294595.1| PREDICTED: polyadenylate-binding protein, cy... 69 1e-09
ref|XP_004294594.1| PREDICTED: polyadenylate-binding protein, cy... 69 1e-09
ref|NP_190188.1| RNA recognition motif-containing protein [Arabi... 68 2e-09
ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Caps... 67 4e-09
ref|XP_007208554.1| hypothetical protein PRUPE_ppa024320mg [Prun... 67 4e-09
ref|XP_006649858.1| PREDICTED: glycine-rich RNA-binding protein ... 67 6e-09
ref|XP_006369511.1| hypothetical protein POPTR_0001s24300g [Popu... 66 9e-09
ref|XP_002299889.1| RNA recognition motif-containing family prot... 66 9e-09
>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|297746123|emb|CBI16179.3| unnamed protein product
[Vitis vinifera]
Length = 112
Score = 89.0 bits (219), Expect = 1e-15
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETSS 446
RLIKDP+TQRPKGFGFVKF SE+DA+ AL+AM+GRIV RLIFVE A+T++PGE ++
Sbjct: 55 RLIKDPKTQRPKGFGFVKFESEVDAEKALKAMNGRIVRGRLIFVEIAKTTRPGEDAT 111
>gb|EXC35053.1| Cold-inducible RNA-binding protein [Morus notabilis]
Length = 94
Score = 80.1 bits (196), Expect = 5e-13
Identities = 37/57 (64%), Positives = 49/57 (85%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETSS 446
RL+ D +TQRPKGFGFV + SE++A+ AL+AM+GRIV+ RLIFVE A+TSKPGE ++
Sbjct: 37 RLVLDSKTQRPKGFGFVTYESEVEAQKALKAMNGRIVDGRLIFVEVAKTSKPGEEAT 93
>ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
tuberosum]
Length = 125
Score = 80.1 bits (196), Expect = 5e-13
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETSS 446
RL+KDPRTQRPKGFGFV F SE DA+NAL +++GRIV+ RLIFVE AET++ E +
Sbjct: 66 RLVKDPRTQRPKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTEAVENKT 122
>ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
sativus]
Length = 95
Score = 80.1 bits (196), Expect = 5e-13
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPG 458
RLI+DP+T+RPKGFGFV F S +AK AL+AMDGRIV+ RLIFVEFA+T K G
Sbjct: 37 RLIRDPKTERPKGFGFVTFQSPAEAKKALKAMDGRIVDGRLIFVEFAKTEKHG 89
>ref|XP_006424765.1| hypothetical protein CICLE_v10029673mg [Citrus clementina]
gi|568870147|ref|XP_006488271.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like [Citrus
sinensis] gi|557526699|gb|ESR38005.1| hypothetical
protein CICLE_v10029673mg [Citrus clementina]
Length = 94
Score = 78.6 bits (192), Expect = 1e-12
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETSS 446
+LI DP+TQRPKGFGF+ F SE DA+ AL+ MDGRIVN RLIFVE A++ PG +S
Sbjct: 37 KLITDPKTQRPKGFGFITFQSEDDAQKALKTMDGRIVNGRLIFVEVAKSRSPGTDAS 93
>ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus] gi|449435013|ref|XP_004135290.1|
PREDICTED: cold-inducible RNA-binding protein B-like
isoform 2 [Cucumis sativus]
Length = 89
Score = 77.8 bits (190), Expect = 2e-12
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPG 458
RLI+DP+T+RPKGFGFV F S +AK AL+AMDGRIV+ RLIFVEFA+T G
Sbjct: 37 RLIRDPKTERPKGFGFVTFQSPAEAKKALKAMDGRIVDGRLIFVEFAKTGDMG 89
>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
protein, putative [Ricinus communis]
Length = 94
Score = 72.8 bits (177), Expect = 8e-11
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETSS 446
RL+ DPRTQ+PKGFGFV F SE A+ AL+AM+GRIV+ RL+FVE A++ GE +S
Sbjct: 37 RLVLDPRTQKPKGFGFVTFDSESQAQKALKAMNGRIVDGRLLFVEVAKSINSGEDAS 93
>ref|NP_200794.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009860|gb|AED97243.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 157
Score = 70.5 bits (171), Expect = 4e-10
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETS 449
RLIKD +TQRPKGFGF+ F SE DA+ AL+A++G+IVN RLIFVE A+ + TS
Sbjct: 96 RLIKDQQTQRPKGFGFITFESEDDAQKALKALNGKIVNGRLIFVETAKEVEAPTTS 151
>dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana]
Length = 112
Score = 70.5 bits (171), Expect = 4e-10
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETS 449
RLIKD +TQRPKGFGF+ F SE DA+ AL+A++G+IVN RLIFVE A+ + TS
Sbjct: 51 RLIKDQQTQRPKGFGFITFESEDDAQKALKALNGKIVNGRLIFVETAKEVEAPTTS 106
>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAE 473
RLI+D +TQRPKGFGF+ F SE DA+NAL+A++G+IVN RLIFVE A+
Sbjct: 37 RLIRDQQTQRPKGFGFITFESEDDAQNALKALNGKIVNGRLIFVEAAK 84
>ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata] gi|297323288|gb|EFH53709.1| hypothetical protein
ARALYDRAFT_905782 [Arabidopsis lyrata subsp. lyrata]
Length = 102
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSK 464
RLI+D TQRPKGFGF+ F SE DA+ AL+++DG+IV RLIFVE A++S+
Sbjct: 37 RLIRDSETQRPKGFGFITFESEDDARKALKSLDGKIVEGRLIFVEVAKSSE 87
>ref|XP_006279867.1| hypothetical protein CARUB_v10028559mg [Capsella rubella]
gi|482548571|gb|EOA12765.1| hypothetical protein
CARUB_v10028559mg [Capsella rubella]
Length = 98
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAE 473
RLIKD +TQRPKGFGF+ F SE DA+ AL+A++G+IV+SRLIFVE A+
Sbjct: 37 RLIKDQQTQRPKGFGFITFKSENDAQKALKALNGKIVDSRLIFVEAAK 84
>ref|XP_004294595.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like isoform 2 [Fragaria vesca subsp. vesca]
Length = 91
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETSS 446
RL+ DP TQRPKGFGFV + SE++A+ A++ MDGR+V+ RL+FVE A P +TSS
Sbjct: 37 RLVIDPNTQRPKGFGFVTYKSEVEAQKAIKVMDGRMVDGRLLFVEVAH---PEDTSS 90
>ref|XP_004294594.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 103
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSKPGETSS 446
RL+ DP TQRPKGFGFV + SE++A+ A++ MDGR+V+ RL+FVE A P +TSS
Sbjct: 49 RLVIDPNTQRPKGFGFVTYKSEVEAQKAIKVMDGRMVDGRLLFVEVAH---PEDTSS 102
>ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like
[Arabidopsis thaliana] gi|46931202|gb|AAT06405.1|
At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis
thaliana] gi|332644581|gb|AEE78102.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSK 464
RLI+D TQRPKGFGF+ F SE DA+ AL+++DG+IV+ RLIFVE A+ ++
Sbjct: 37 RLIRDSETQRPKGFGFITFDSEDDARKALKSLDGKIVDGRLIFVEVAKNAE 87
>ref|XP_006292104.1| hypothetical protein CARUB_v10018300mg [Capsella rubella]
gi|482560811|gb|EOA25002.1| hypothetical protein
CARUB_v10018300mg [Capsella rubella]
Length = 100
Score = 67.0 bits (162), Expect = 4e-09
Identities = 29/51 (56%), Positives = 43/51 (84%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSK 464
RLI+D +TQRPKGFGF+ + SE DA+ A++++DG+IV+ RLIFVE A+ ++
Sbjct: 37 RLIRDSKTQRPKGFGFITYESEDDARKAMKSLDGKIVDGRLIFVEVAKNAE 87
>ref|XP_007208554.1| hypothetical protein PRUPE_ppa024320mg [Prunus persica]
gi|462404196|gb|EMJ09753.1| hypothetical protein
PRUPE_ppa024320mg [Prunus persica]
Length = 94
Score = 67.0 bits (162), Expect = 4e-09
Identities = 30/51 (58%), Positives = 42/51 (82%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSK 464
R++ D TQRPKGFGFV + S+++A+ AL+AM+GR+V+ RLIFVEFA+ K
Sbjct: 37 RMVVDRITQRPKGFGFVTYKSDVEAQKALKAMNGRMVDGRLIFVEFAQNQK 87
>ref|XP_006649858.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Oryza brachyantha]
Length = 105
Score = 66.6 bits (161), Expect = 6e-09
Identities = 30/51 (58%), Positives = 42/51 (82%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSK 464
RL++D +T RPKGFGFVK++S+ +A+ A++AMDGRI+ RLIFVE A+ K
Sbjct: 53 RLVRDNQTGRPKGFGFVKYSSQAEAEKAVKAMDGRILRGRLIFVEIAKERK 103
>ref|XP_006369511.1| hypothetical protein POPTR_0001s24300g [Populus trichocarpa]
gi|550348074|gb|ERP66080.1| hypothetical protein
POPTR_0001s24300g [Populus trichocarpa]
Length = 119
Score = 65.9 bits (159), Expect = 9e-09
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSK 464
RL+ + +T RPKGFGFV F SE DA AL+AM+GRIVN RLIFVE A+ ++
Sbjct: 68 RLVVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDTE 118
>ref|XP_002299889.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222847147|gb|EEE84694.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 88
Score = 65.9 bits (159), Expect = 9e-09
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = -2
Query: 616 RLIKDPRTQRPKGFGFVKFASEIDAKNALEAMDGRIVNSRLIFVEFAETSK 464
RL+ + +T RPKGFGFV F SE DA AL+AM+GRIVN RLIFVE A+ ++
Sbjct: 37 RLVVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDTE 87