BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00018690
         (1402 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus...   535   e-149
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]       463   e-128
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   453   e-125
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   451   e-124
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   448   e-123
ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma ...   447   e-123
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   447   e-123
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik...   445   e-122
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592...   443   e-121
ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma ...   443   e-121
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              441   e-121
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   439   e-120
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   436   e-119
ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phas...   432   e-118
ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-lik...   431   e-118
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi...   431   e-118
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622...   428   e-117
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr...   428   e-117
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        426   e-116
ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prun...   421   e-115

>gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus guttatus]
          Length = 435

 Score =  535 bits (1379), Expect = e-149
 Identities = 261/399 (65%), Positives = 307/399 (76%), Gaps = 2/399 (0%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNT-NDGAEIIDES 1226
            DACSL RW A+ESY+FMY +PW +VNDFYLD VNGRRS+ +LF +E    +DGAE I++ 
Sbjct: 36   DACSLSRWNAKESYQFMYEKPWQKVNDFYLDVVNGRRSVSELFERETYAVHDGAETIEDC 95

Query: 1225 DKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEK 1046
            DKP+   V AK R+GRW RVTFKI +SY+G+SFDGWQKQP LNTVQGL+E +LGKFVDE 
Sbjct: 96   DKPDLMSVRAKDRSGRWARVTFKIRLSYHGSSFDGWQKQPGLNTVQGLIEKSLGKFVDED 155

Query: 1045 KAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIR 866
            KAQ+LKEKKLP++ C  VAGRTDKGVTAL Q C+FYTWRKD+K +DIEDA+   APGKIR
Sbjct: 156  KAQMLKEKKLPVDCCVTVAGRTDKGVTALEQFCSFYTWRKDIKTVDIEDAINGVAPGKIR 215

Query: 865  VTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLS 686
              SVSQV+RDFHPNFSAKWR Y YIFPF+DEN DDE S+C+K+ LD  +CHD  YGE   
Sbjct: 216  AISVSQVTRDFHPNFSAKWRRYLYIFPFDDENVDDEASQCEKNVLDSDVCHDGRYGELPG 275

Query: 685  EQTCEDGDDDYVETQ-QSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPP 509
             + C +  DDY +T+ Q+G KP +F+VS VN LLH LEGKLLSFRMFARDTKASRNIGPP
Sbjct: 276  VENCGNEIDDYEQTETQTGHKPLSFDVSCVNRLLHHLEGKLLSFRMFARDTKASRNIGPP 335

Query: 508  TECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXA 329
            TECF+ H+RA+EAY+ CPK G  SK+MC+ELVANRFLRKMVRVLV              A
Sbjct: 336  TECFIFHSRASEAYIRCPKEGTRSKIMCIELVANRFLRKMVRVLVATAIREAAAGADEDA 395

Query: 328  LIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
            L+KL+D            PDGLCLVDVGY EFD+K C I
Sbjct: 396  LLKLIDATCRRATAPPAPPDGLCLVDVGYAEFDRKNCFI 434


>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
          Length = 406

 Score =  463 bits (1191), Expect = e-128
 Identities = 241/398 (60%), Positives = 286/398 (71%), Gaps = 1/398 (0%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNT-NDGAEIIDES 1226
            DA SL RWTA+ESY+FMY+RPW RVN FYL+ VNGRR+L +LF KE +  +D    +D  
Sbjct: 28   DAFSLCRWTAKESYQFMYSRPWQRVNCFYLELVNGRRTLSELFPKEKHAIHDTDRTLDVY 87

Query: 1225 DKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEK 1046
            + P S  +P + RTGRW R+TFKI++SY+G SFDGWQKQP LNTVQGL+E++LG F+DEK
Sbjct: 88   NYP-SASLPNEQRTGRWARLTFKIILSYHGYSFDGWQKQPGLNTVQGLIENSLGVFIDEK 146

Query: 1045 KAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIR 866
            KA  LKEK LP +GCA+VAGRTDKGV+ALGQVC+FYTWRK+V+A DI +A+  +APGK+R
Sbjct: 147  KALQLKEKNLPRDGCAVVAGRTDKGVSALGQVCSFYTWRKEVEAEDIMEAINDSAPGKLR 206

Query: 865  VTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLS 686
            VTSVSQVSR+FHPNFSAKWR Y YIFP N E  D E  + +K++     C DD  G    
Sbjct: 207  VTSVSQVSREFHPNFSAKWRRYLYIFPLNHEYRDREAFKSEKNDFCGDNCLDDQSG---- 262

Query: 685  EQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPT 506
                           Q+G KP  FEVSRV+ LL  LEGKLLSFRMFARDTKASR+IGPPT
Sbjct: 263  --------------MQTGCKPLNFEVSRVSQLLLHLEGKLLSFRMFARDTKASRSIGPPT 308

Query: 505  ECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXAL 326
            ECF+ HARAAEAYLPC +    SK+MCVELVA+RFLRKMVRVLV               L
Sbjct: 309  ECFIFHARAAEAYLPCSEEETKSKIMCVELVADRFLRKMVRVLVATAIREAAAGADEDML 368

Query: 325  IKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
            ++LM             PDGLCLVDVGYTEFD+K CLI
Sbjct: 369  LQLMGATCRRATAPPAPPDGLCLVDVGYTEFDRKVCLI 406


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  453 bits (1166), Expect = e-125
 Identities = 236/408 (57%), Positives = 285/408 (69%), Gaps = 10/408 (2%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVN-TNDGAEIIDES 1226
            D+C   RWTARES++FMYARPW  V+DFY + VNGR S  +LF  +++   D A+I ++S
Sbjct: 41   DSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRSQMHFVRDDAKIQEDS 100

Query: 1225 DKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEK 1046
            +K E E    + R GRW RV FKI +SY+G SFDGWQKQP LNTVQGLVE +LGKFVDEK
Sbjct: 101  NKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLVEKSLGKFVDEK 160

Query: 1045 KAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIR 866
            KAQ LKE   PLEGCA+VAGRTDKGV+AL QVC+FYTWRKDV+  +IEDA+ ++APGKIR
Sbjct: 161  KAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPHEIEDAINSSAPGKIR 220

Query: 865  VTSVSQVSRDFHPNFSAKWRHYFYIFPFND--------ENED-DEVSECKKHNLDKTICH 713
            V SVS+VSR FHPNFSAKWR Y YIFP ND        ++ED + +   +K++  +  C 
Sbjct: 221  VISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLENLRSYEKYDEQRNGCA 280

Query: 712  DDPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTK 533
            +    E + E    D D+      +   KP  F + RVN LL QLEGKLLS+++FARDTK
Sbjct: 281  ELTSEEHVEELITSDKDE-----LEGAKKPRIFSICRVNQLLQQLEGKLLSYKIFARDTK 335

Query: 532  ASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXX 353
            ASRN+GPPTECF++HARA EA LPCP  G G KVMCVELVANRFLRKMVRVLV       
Sbjct: 336  ASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCVELVANRFLRKMVRVLVATSIREA 395

Query: 352  XXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 209
                   AL+KLMD            PDGLCL DVGYTEFD + C++P
Sbjct: 396  AAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICIVP 443


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  451 bits (1160), Expect = e-124
 Identities = 237/400 (59%), Positives = 283/400 (70%), Gaps = 9/400 (2%)
 Frame = -1

Query: 1384 RWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDESDKPESEC 1205
            RWTARES++FMY RPW +V DFY + V GR SL  L G E +     EI++ SDK E   
Sbjct: 36   RWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLGIETHPIHDGEIVEASDKTEFGN 95

Query: 1204 VPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKE 1025
            V  K R GRW R+TFKI++SY+G SFDGWQKQP LNTVQGLVE++LG+FVDE+KAQ LKE
Sbjct: 96   VLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDERKAQQLKE 155

Query: 1024 KKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQV 845
            K LP+EG   VAGRTDKGVTAL QVC+FYTW+KDVK  DIEDA+  AAPGK+RV SVS+V
Sbjct: 156  KNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAAPGKLRVISVSEV 215

Query: 844  SRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLD-KTICHDDPYGERLSEQTCED 668
            SR FHPNFSAKWRHYFYIFP ND ++ +++SE   + +D + I  ++ YGE+ SE   + 
Sbjct: 216  SRIFHPNFSAKWRHYFYIFPLNDGDDGEQISE---NEMDIQKISFNEKYGEQGSECPAQY 272

Query: 667  GDDDYVETQ--------QSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGP 512
               +  E          +S  KP TF +SRV+ LL QLEGKLLS+++FARDTKASRNIGP
Sbjct: 273  NGGENTENLIFDDDGEFESRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASRNIGP 332

Query: 511  PTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXX 332
            PTECFV HARA EA L     G G+KVMC+ELVANRFLRKMVRVLV              
Sbjct: 333  PTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQD 392

Query: 331  ALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
            AL+KLMD            PDGLCL+DVG+TEFD + C I
Sbjct: 393  ALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFI 432


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  448 bits (1152), Expect = e-123
 Identities = 241/404 (59%), Positives = 276/404 (68%), Gaps = 7/404 (1%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEV-NTNDGAEIIDES 1226
            D C   RWTARESY+FMY RPW  V DFY  AVNGR SL  L G E+   +D AE     
Sbjct: 39   DRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIY 98

Query: 1225 DKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEK 1046
            +  E      K +TGRW R TFKI++SY+GNSFDGWQKQP LNTVQGLVE +LGKFVDEK
Sbjct: 99   NSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEK 158

Query: 1045 KAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIR 866
            KAQ+LK+K LPLEGCALVAGRTDKGVTAL QVC+FYTWR DVK  DIED++ +AAPGK+R
Sbjct: 159  KAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLR 218

Query: 865  VTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLS 686
             +SVSQVSR FHPNFSAKWR Y YI P ND  E+ E       N++     +    E  +
Sbjct: 219  TSSVSQVSRIFHPNFSAKWRRYLYILPLND-GENMEPDSTTWENVENREEENFVKIEASN 277

Query: 685  EQTCEDGDDDYV------ETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASR 524
             + C DG  D +      E   S  KP TF ++RVN LL +LEGKLLS++MFARDTKASR
Sbjct: 278  GEKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASR 337

Query: 523  NIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXX 344
            N GPPTECFV+HARAAE  LPC + GVG  VMCVELVANRFLRKMVRVLV          
Sbjct: 338  NEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAG 397

Query: 343  XXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
                AL++LMD            PDGL LVDVGYT+FD + C I
Sbjct: 398  AGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441


>ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
            gi|508784930|gb|EOY32186.1| Pseudouridine synthase
            isoform 1 [Theobroma cacao]
          Length = 444

 Score =  447 bits (1151), Expect = e-123
 Identities = 237/405 (58%), Positives = 282/405 (69%), Gaps = 8/405 (1%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDESD 1223
            D+CS  RWTARESY FMY R W  V DFY + VNGR +L  LFG E + +D +E ++ SD
Sbjct: 49   DSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTLFGTETSIHDDSETVEVSD 108

Query: 1222 KPESECVPAKG-RTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEK 1046
            +        KG R+GRWERVTFKI+ISYNG +FDGWQKQP LNTVQ +VE +LG+FVDEK
Sbjct: 109  E--------KGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRFVDEK 160

Query: 1045 KAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIR 866
            KAQ+LKEK  PLEGCA+VAGRTDKGV+A+ QVC+FYTWRKDVK  DIEDA+ + APGK+R
Sbjct: 161  KAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAPGKLR 220

Query: 865  VTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER-- 692
            V SVS+VSR FHPNFSAKWRHY YIFP +  N++ E   C+     +    D  Y E+  
Sbjct: 221  VVSVSEVSRVFHPNFSAKWRHYLYIFPLS--NQEIEKQSCENKKEVENFISDGNYNEQRN 278

Query: 691  --LSEQTCEDGDDDYVETQ---QSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKAS 527
              L     E+ ++  +      ++  KP  F V RVN LL QLE KLLS++MFARDTKAS
Sbjct: 279  GYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTKAS 338

Query: 526  RNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXX 347
            RNIGPPTECF++HARAAEA +PC   G G +VMCVELVANRFLRKMVRVLV         
Sbjct: 339  RNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVELVANRFLRKMVRVLVATSIREAAA 398

Query: 346  XXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
                 AL+KLM             PDGLCLVDVGYTEFD + CL+
Sbjct: 399  GAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 443


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  447 bits (1149), Expect = e-123
 Identities = 240/404 (59%), Positives = 276/404 (68%), Gaps = 7/404 (1%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEV-NTNDGAEIIDES 1226
            D C   RWTARESY+FMY RPW  V DFY  AVNGR SL  L G E+   +D AE     
Sbjct: 39   DRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIY 98

Query: 1225 DKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEK 1046
            +  E      K +TGRW R TFKI++SY+GNSFDGWQKQP LNTVQGLVE +LGKFVDEK
Sbjct: 99   NSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEK 158

Query: 1045 KAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIR 866
            KAQ+LK+K LPLEGCALVAGRTDKGVTAL QVC+FYTWR DVK  DIED++ +AAPGK+R
Sbjct: 159  KAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLR 218

Query: 865  VTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLS 686
             +SVSQVSR FHPNFSAKWR Y YI P ND  E+ E       N++     +    E  +
Sbjct: 219  TSSVSQVSRIFHPNFSAKWRRYLYILPLND-GENMEPDSTTWENVENREEENFVKIEASN 277

Query: 685  EQTCEDGDDDYV------ETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASR 524
             + C DG  D +      +   S  KP TF ++RVN LL +LEGKLLS++MFARDTKASR
Sbjct: 278  GEKCVDGIHDNLVLSPNDQELVSADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASR 337

Query: 523  NIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXX 344
            N GPPTECFV+HARAAE  LPC + GVG  VMCVELVANRFLRKMVRVLV          
Sbjct: 338  NEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAG 397

Query: 343  XXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
                AL++LMD            PDGL LVDVGYT+FD + C I
Sbjct: 398  AGEDALLELMDATCRRATAPPAPPDGLSLVDVGYTDFDSQICFI 441


>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 436

 Score =  445 bits (1144), Expect = e-122
 Identities = 236/417 (56%), Positives = 283/417 (67%), Gaps = 19/417 (4%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTN-DGAEIIDES 1226
            D+C   RWT+RE YEFMYARPWH+V DFY D V G  SL  LFGKE   + + AEI ++ 
Sbjct: 35   DSCKFSRWTSRECYEFMYARPWHKVVDFYADMVKGHISLSGLFGKETPADHEDAEIREDH 94

Query: 1225 DKPESECVPAKGRT----GRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKF 1058
            +K E   +P K ++    GRW R  F I++SY+G SFDGWQKQP LNTVQGLVE +LG+F
Sbjct: 95   EKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEF 154

Query: 1057 VDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAP 878
            VDEKKAQ+LK+K LPLE CALVAGRTDKGV+A  QVC+FYTWRKDVK  D++ AL  AAP
Sbjct: 155  VDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAP 214

Query: 877  GKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND---ENEDDEV-----------SECKK 740
            GKIRV S+++VSR+FHPNFSAKWRHY YIFP +D   E +  ++           +EC K
Sbjct: 215  GKIRVVSLTKVSREFHPNFSAKWRHYLYIFPIDDVLGEKQGGQIWIDDSTNVHQQNECDK 274

Query: 739  HNLDKTICHDDPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLS 560
             ++DK+  ++             + +D  V     G KP  FEV +VN LL QLEGKLLS
Sbjct: 275  SDVDKSNVNE-----------INNENDKLVH----GNKPTKFEVGKVNRLLGQLEGKLLS 319

Query: 559  FRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRV 380
            ++MFARDTKASRNIGPPTECFV HARA E  +PC K G   K MC+ELVANRFLRKMVRV
Sbjct: 320  YKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKDGSHMKTMCIELVANRFLRKMVRV 379

Query: 379  LVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 209
            LV              AL+KLMD            PDGLCLVDVGYT++D + CLIP
Sbjct: 380  LVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDGLCLVDVGYTDYDIRHCLIP 436


>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
          Length = 436

 Score =  443 bits (1139), Expect = e-121
 Identities = 234/417 (56%), Positives = 282/417 (67%), Gaps = 19/417 (4%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTN-DGAEIIDES 1226
            D+C   RWT+RE YEFMYAR WH+V DFY D V G  SL +LFGKE   + + AEI ++ 
Sbjct: 35   DSCKFSRWTSRECYEFMYARLWHKVVDFYADMVKGHTSLSRLFGKETPADHEDAEIREDH 94

Query: 1225 DKPESECVPAKGRT----GRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKF 1058
            +K E   +P K ++    GRW R  F I++SY+G SFDGWQKQP LNTVQGLVE +LG+F
Sbjct: 95   EKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEF 154

Query: 1057 VDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAP 878
            VDEKKAQ+LK+K LPLE CALVAGRTDKGV+A  QVC+FYTWRKDVK  D++ AL  AAP
Sbjct: 155  VDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAP 214

Query: 877  GKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--------------ENEDDEVSECKK 740
            GKIRV S+++VSR+FHPNFSAKWRHY YIFP +D                +  + +EC K
Sbjct: 215  GKIRVVSLTKVSREFHPNFSAKWRHYLYIFPIDDVLGEKQRGQIWIDGSTDVHQQNECGK 274

Query: 739  HNLDKTICHDDPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLS 560
             ++DK+  ++             D +++ V     G KP  FEV +VN LL QLEGKLLS
Sbjct: 275  SDIDKSNVNE-----------INDENNELVH----GNKPTKFEVGKVNRLLGQLEGKLLS 319

Query: 559  FRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRV 380
            ++MFARDTKASRNIGPPTECFV HARA E  +PC K G   K MC+ELVANRFLRKMVRV
Sbjct: 320  YKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKDGSLMKTMCIELVANRFLRKMVRV 379

Query: 379  LVXXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 209
            LV              AL+KLMD            PDGLCLVDVGYT++D + CLIP
Sbjct: 380  LVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDGLCLVDVGYTDYDIRHCLIP 436


>ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
            gi|508784931|gb|EOY32187.1| Pseudouridine synthase
            isoform 2 [Theobroma cacao]
          Length = 446

 Score =  443 bits (1139), Expect = e-121
 Identities = 237/407 (58%), Positives = 282/407 (69%), Gaps = 10/407 (2%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDESD 1223
            D+CS  RWTARESY FMY R W  V DFY + VNGR +L  LFG E + +D +E ++ SD
Sbjct: 49   DSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTLFGTETSIHDDSETVEVSD 108

Query: 1222 KPESECVPAKG-RTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEK 1046
            +        KG R+GRWERVTFKI+ISYNG +FDGWQKQP LNTVQ +VE +LG+FVDEK
Sbjct: 109  E--------KGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSLGRFVDEK 160

Query: 1045 KAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIR 866
            KAQ+LKEK  PLEGCA+VAGRTDKGV+A+ QVC+FYTWRKDVK  DIEDA+ + APGK+R
Sbjct: 161  KAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINSVAPGKLR 220

Query: 865  VTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGER-- 692
            V SVS+VSR FHPNFSAKWRHY YIFP +  N++ E   C+     +    D  Y E+  
Sbjct: 221  VVSVSEVSRVFHPNFSAKWRHYLYIFPLS--NQEIEKQSCENKKEVENFISDGNYNEQRN 278

Query: 691  --LSEQTCEDGDDDYVETQ---QSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKAS 527
              L     E+ ++  +      ++  KP  F V RVN LL QLE KLLS++MFARDTKAS
Sbjct: 279  GYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMFARDTKAS 338

Query: 526  RNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELVANRFLRKMVRVLVXXXXXXX 353
            RNIGPPTECF++HARAAEA +PC     G G +VMCVELVANRFLRKMVRVLV       
Sbjct: 339  RNIGPPTECFMYHARAAEARIPCSVNDHGEGREVMCVELVANRFLRKMVRVLVATSIREA 398

Query: 352  XXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
                   AL+KLM             PDGLCLVDVGYTEFD + CL+
Sbjct: 399  AAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDPQNCLL 445


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  441 bits (1134), Expect = e-121
 Identities = 229/391 (58%), Positives = 270/391 (69%)
 Frame = -1

Query: 1384 RWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDESDKPESEC 1205
            RWTARES++FMY RPW +V DFY + V GR SL  L G E +     EI++ SDK E   
Sbjct: 36   RWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLGIETHPIHDGEIVEASDKTEFGN 95

Query: 1204 VPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKE 1025
            V  K R GRW R+TFKI++SY+G SFDGWQKQP LNTVQGLVE++LG+FVDE+KAQ LKE
Sbjct: 96   VLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDERKAQQLKE 155

Query: 1024 KKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQV 845
            K LP+EG   VAGRTDKGVTAL QVC+FYTW+KDVK  DIEDA+  AAPGK+RV SVS+V
Sbjct: 156  KNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDAINGAAPGKLRVISVSEV 215

Query: 844  SRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLSEQTCEDG 665
            SR FHPNFSAKWRHYFYIFP ND ++ +++SE                          + 
Sbjct: 216  SRIFHPNFSAKWRHYFYIFPLNDGDDGEQISE-------------------------NEM 250

Query: 664  DDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHA 485
            D   +   ++  KP TF +SRV+ LL QLEGKLLS+++FARDTKASRNIGPPTECFV HA
Sbjct: 251  DIQKISFNENRKKPSTFSISRVDQLLRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHA 310

Query: 484  RAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDXX 305
            RA EA L     G G+KVMC+ELVANRFLRKMVRVLV              AL+KLMD  
Sbjct: 311  RATEARLQFSDDGEGTKVMCIELVANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDAT 370

Query: 304  XXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
                      PDGLCL+DVG+TEFD + C I
Sbjct: 371  CRRATAPPAPPDGLCLIDVGFTEFDPQICFI 401


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
            gi|550318755|gb|ERP50021.1| hypothetical protein
            POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  439 bits (1129), Expect = e-120
 Identities = 231/406 (56%), Positives = 277/406 (68%), Gaps = 8/406 (1%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDESD 1223
            D+C   RWTARES++FM+ARPW  V DFY  +VNG+ SL +LFG + +     + I+E  
Sbjct: 45   DSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQAHDVHCDDKIEEVS 104

Query: 1222 KPES--ECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDE 1049
                  E V    ++GRW RVTFKI++SY+G SFDGWQKQP LNTVQGLVE +LG+FVDE
Sbjct: 105  NETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDE 164

Query: 1048 KKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKI 869
            KKAQ LKE+  PLEGCA VAGRTDKGV+AL QVC+FYTWRKDVK  +IEDA+   APGK+
Sbjct: 165  KKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAINDVAPGKV 224

Query: 868  RVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHD------D 707
            RV S+S+VSR FHPNFSAKWR Y YIFP ND    +E+    +  ++    H+      +
Sbjct: 225  RVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIE--GEGGIENFSSHENCEKQRN 282

Query: 706  PYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKAS 527
              GE  SE+  E+      +  Q   KP +F V RVN LL QLEGKLLS++MFARDTKAS
Sbjct: 283  ECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYKMFARDTKAS 342

Query: 526  RNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXX 347
            RN+GPPTECF++HARA E  LP P    G +VMCVEL+ANRFLRKMVRVLV         
Sbjct: 343  RNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKMVRVLVATSVREAAA 402

Query: 346  XXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 209
                 AL+KLMD            PDGLCLVDVGYTEFD + CLIP
Sbjct: 403  GAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLIP 448


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 457

 Score =  436 bits (1120), Expect = e-119
 Identities = 234/415 (56%), Positives = 278/415 (66%), Gaps = 17/415 (4%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTN---DGAEIID 1232
            D+C   RWTARES++FM+ARPW  V DFY  +VNG+ SL +LFG +V        A  + 
Sbjct: 45   DSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQVFFTMELKKAHDVH 104

Query: 1231 ESDKPES--------ECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVE 1076
              DK E         E V    ++GRW RVTFKI++SY+G SFDGWQKQP LNTVQGLVE
Sbjct: 105  CDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVE 164

Query: 1075 SALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDA 896
             +LG+FVDEKKAQ LKE+  PLEGCA VAGRTDKGV+AL QVC+FYTWRKDVK  +IEDA
Sbjct: 165  KSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDA 224

Query: 895  LKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTIC 716
            +   APGK+RV S+S+VSR FHPNFSAKWR Y YIFP ND    +E+    +  ++    
Sbjct: 225  INDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIE--GEGGIENFSS 282

Query: 715  HD------DPYGERLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFR 554
            H+      +  GE  SE+  E+      +  Q   KP +F V RVN LL QLEGKLLS++
Sbjct: 283  HENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLEGKLLSYK 342

Query: 553  MFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLV 374
            MFARDTKASRN+GPPTECF++HARA E  LP P    G +VMCVEL+ANRFLRKMVRVLV
Sbjct: 343  MFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKMVRVLV 402

Query: 373  XXXXXXXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 209
                          AL+KLMD            PDGLCLVDVGYTEFD + CLIP
Sbjct: 403  ATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPRNCLIP 457


>ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
            gi|561033630|gb|ESW32209.1| hypothetical protein
            PHAVU_002G302500g [Phaseolus vulgaris]
          Length = 440

 Score =  432 bits (1112), Expect = e-118
 Identities = 232/398 (58%), Positives = 275/398 (69%), Gaps = 1/398 (0%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKE-VNTNDGAEIIDES 1226
            D     RWTARES++FMYARPW RVNDFY + V    SL  LFG + +  ++   I   S
Sbjct: 55   DPSEYARWTARESFQFMYARPWQRVNDFYFNVVRANLSLSLLFGPQTILDHNDTGIAALS 114

Query: 1225 DKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEK 1046
            D+ E E V ++ R+GRW R TFKI++SY+G SFDGWQKQP LNTVQG+VE++LGKFVDEK
Sbjct: 115  DQSELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASLGKFVDEK 174

Query: 1045 KAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIR 866
            K Q+LK+K LP+EGCA+VAGRTDKGVT L QVC+FYTW+KDVK  DIEDA+  AA GK+R
Sbjct: 175  KTQLLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINQAALGKLR 234

Query: 865  VTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLS 686
            V SVS+VSR FHPNFSAKWRHY YIFP  +   D       + N +   C    Y E + 
Sbjct: 235  VISVSEVSRVFHPNFSAKWRHYLYIFPLTNGYRD-------QSNSNGESCDISKYNE-MH 286

Query: 685  EQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPT 506
            + + +DG    +E Q+   K + F VS+VN LL +LEGKLLS++MFARDTKASRN GPPT
Sbjct: 287  DSSSKDG----IENQE---KSYLFSVSKVNVLLRKLEGKLLSYKMFARDTKASRNDGPPT 339

Query: 505  ECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXAL 326
            ECFV+HARA E  LP    G  +KVMCVELVANRFLRKMVRVLV              AL
Sbjct: 340  ECFVYHARAMEVKLPTTDCGEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDAL 399

Query: 325  IKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
            IKLMD            PDGLCLVDVGYTEFD + C I
Sbjct: 400  IKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPQKCFI 437


>ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-like [Cicer arietinum]
          Length = 422

 Score =  431 bits (1109), Expect = e-118
 Identities = 229/392 (58%), Positives = 272/392 (69%), Gaps = 1/392 (0%)
 Frame = -1

Query: 1384 RWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKE-VNTNDGAEIIDESDKPESE 1208
            RW ARES+EFMYARPW  VNDFYL+AV G  SLP LFG + V  +D + I   SDK E E
Sbjct: 43   RWNARESFEFMYARPWQLVNDFYLNAVRGNSSLPLLFGVQTVPDHDDSGISVLSDKTELE 102

Query: 1207 CVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLK 1028
               +K R GRW R+ FKI++SY+G SFDGWQKQPSLNTVQ +VE++LGKFVDE K Q+LK
Sbjct: 103  KGVSKDRGGRWARINFKIVLSYHGESFDGWQKQPSLNTVQSVVEASLGKFVDEMKTQLLK 162

Query: 1027 EKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQ 848
            EK LP+EGCA VAGRTDKGVTAL QVC+FYTW+KD+   DIEDA+   APGK+RV SV +
Sbjct: 163  EKGLPIEGCASVAGRTDKGVTALQQVCSFYTWKKDINPRDIEDAINDGAPGKLRVISVHE 222

Query: 847  VSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLSEQTCED 668
            VSR FHPNFSAKWR Y YIFP  DE + D+ S   + + D+ I +          + C+ 
Sbjct: 223  VSRAFHPNFSAKWRRYLYIFPLTDEGDKDQ-SGSNEESCDRFIYN----------EVCDS 271

Query: 667  GDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHH 488
               D +E +    K + F V +VN LL +LEGKLLS++MFARDTKASRN GPPTECFV+H
Sbjct: 272  VSKDELENEM---KSYVFSVRKVNRLLQKLEGKLLSYKMFARDTKASRNDGPPTECFVYH 328

Query: 487  ARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLMDX 308
            ARA EA LP    G  ++VMC+ELVANRFLRKMVRVLV              AL++LMD 
Sbjct: 329  ARAMEARLPTTDNG-EARVMCIELVANRFLRKMVRVLVATTIREAAAGAEDDALLRLMDA 387

Query: 307  XXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
                       PDGLCLVDVGY EFD+K C I
Sbjct: 388  TCRRATAPPAPPDGLCLVDVGYAEFDQKKCFI 419


>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 444

 Score =  431 bits (1107), Expect = e-118
 Identities = 229/394 (58%), Positives = 270/394 (68%), Gaps = 3/394 (0%)
 Frame = -1

Query: 1384 RWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKE---VNTNDGAEIIDESDKPE 1214
            RWTARES+EFMYARPW RVNDFYL+ V    SLP LFG +   V+ ND   I   S   E
Sbjct: 63   RWTARESFEFMYARPWQRVNDFYLNIVRANLSLPLLFGAQTLVVDHNDTG-IAALSGSSE 121

Query: 1213 SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQV 1034
             E V ++ R+GRW R TFKI++SY+G SFDGWQKQP LNTVQ +VE +LGKFVDEKK Q+
Sbjct: 122  LESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEGSLGKFVDEKKTQL 181

Query: 1033 LKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSV 854
            LK+K LP+EGCA+VAGRTDKGVT L QVC+FYTW+KDVK  DIEDA+  AAPGK+RV SV
Sbjct: 182  LKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINHAAPGKLRVISV 241

Query: 853  SQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGERLSEQTC 674
            S+VSR FHPNFSAKWR Y YIFP  +    D+ S+           + + Y      +  
Sbjct: 242  SEVSRVFHPNFSAKWRRYLYIFPLTNGGYTDQSSD-----------NGEFYDSFKYNEIH 290

Query: 673  EDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFV 494
            +    D +E ++   K + F +S+VN LL +LEGKLLS++MFARDTKASRN GPPTECFV
Sbjct: 291  DSASKDELENEK---KSYAFSISKVNRLLRKLEGKLLSYKMFARDTKASRNDGPPTECFV 347

Query: 493  HHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXXXALIKLM 314
            +HARA E  LP    G  +KVMCVELVANRFLRKMVRVLV              ALIKLM
Sbjct: 348  YHARAMEVKLPATDHGEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALIKLM 407

Query: 313  DXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
            D            PDGLCLVDVGYTEF+ + C I
Sbjct: 408  DATCRRATAPPAPPDGLCLVDVGYTEFEPQKCFI 441


>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
          Length = 454

 Score =  428 bits (1100), Expect = e-117
 Identities = 236/410 (57%), Positives = 277/410 (67%), Gaps = 12/410 (2%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDESD 1223
            D+C   RWTA+ESYEFM ARPW  V DFY D V+GR +L  LFG E  T   +   DE++
Sbjct: 52   DSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTLSDLFGTE-RTRTSSIHNDENE 110

Query: 1222 KPE----SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFV 1055
             PE    S+    +  +GRW R  FKI++SY+G SFDGWQKQP LNTVQGLVE  LG FV
Sbjct: 111  IPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDGWQKQPDLNTVQGLVEKCLGSFV 170

Query: 1054 DEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPG 875
            DEK+A++LKEK  PLEGCALVAGRTDKGVTAL QVC+FYTWRKDVK  +IEDA+ +AAPG
Sbjct: 171  DEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSFYTWRKDVKPSEIEDAINSAAPG 230

Query: 874  KIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--ENEDDEVSECKKHNLDKTICHDDPY 701
            KIRV SVSQVSR FHPNFSAKWR Y YIFP ND  + E    SE +  N   +    +  
Sbjct: 231  KIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQSIDSEVEVENFHTS----NNV 286

Query: 700  GERLSEQTCEDGDDDYVETQQSG----TKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTK 533
            G++     C +  ++ +   + G     KP  F + RVN LL +LEGKLLS++ FARDTK
Sbjct: 287  GKQ--SNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLLLQRLEGKLLSYKTFARDTK 344

Query: 532  ASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELVANRFLRKMVRVLVXXXXX 359
            ASRNIGPPTECF++HARA EA LPCP    G G KVMCVELVANRFLRKMVRVLV     
Sbjct: 345  ASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVELVANRFLRKMVRVLVATLVR 404

Query: 358  XXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 209
                     AL+KL+D            P+GLCLVDVGYT FD +  LIP
Sbjct: 405  EAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGYTNFDPQNSLIP 454


>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
            gi|557556408|gb|ESR66422.1| hypothetical protein
            CICLE_v10008288mg [Citrus clementina]
          Length = 447

 Score =  428 bits (1100), Expect = e-117
 Identities = 236/410 (57%), Positives = 277/410 (67%), Gaps = 12/410 (2%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGAEIIDESD 1223
            D+C   RWTA+ESYEFM ARPW  V DFY D V+GR +L  LFG E  T   +   DE++
Sbjct: 45   DSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTLSDLFGTE-RTRTSSIHNDENE 103

Query: 1222 KPE----SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFV 1055
             PE    S+    +  +GRW R  FKI++SY+G SFDGWQKQP LNTVQGLVE  LG FV
Sbjct: 104  IPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDGWQKQPDLNTVQGLVEKCLGSFV 163

Query: 1054 DEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPG 875
            DEK+A++LKEK  PLEGCALVAGRTDKGVTAL QVC+FYTWRKDVK  +IEDA+ +AAPG
Sbjct: 164  DEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSFYTWRKDVKPSEIEDAINSAAPG 223

Query: 874  KIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND--ENEDDEVSECKKHNLDKTICHDDPY 701
            KIRV SVSQVSR FHPNFSAKWR Y YIFP ND  + E    SE +  N   +    +  
Sbjct: 224  KIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQSIDSEVEVENFHTS----NNV 279

Query: 700  GERLSEQTCEDGDDDYVETQQSG----TKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTK 533
            G++     C +  ++ +   + G     KP  F + RVN LL +LEGKLLS++ FARDTK
Sbjct: 280  GKQ--SNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLLLQRLEGKLLSYKTFARDTK 337

Query: 532  ASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELVANRFLRKMVRVLVXXXXX 359
            ASRNIGPPTECF++HARA EA LPCP    G G KVMCVELVANRFLRKMVRVLV     
Sbjct: 338  ASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVELVANRFLRKMVRVLVATLVR 397

Query: 358  XXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLIP 209
                     AL+KL+D            P+GLCLVDVGYT FD +  LIP
Sbjct: 398  EAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGYTNFDPQNSLIP 447


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  426 bits (1094), Expect = e-116
 Identities = 231/401 (57%), Positives = 271/401 (67%), Gaps = 4/401 (0%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGK----EVNTNDGAEII 1235
            D C   RWTARESY+FMY RPW +V DFY + VNG  S   LF      +V+ +D    I
Sbjct: 45   DPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNGTTSFSSLFPLHKKYQVDDDDYDAEI 104

Query: 1234 DESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFV 1055
             E    + +   ++ R+GRW R TFK+++ Y+G SFDGWQKQP LNTVQGLVE +LG+FV
Sbjct: 105  PEISDDKVKLKKSEERSGRWARATFKVVLGYHGASFDGWQKQPGLNTVQGLVERSLGRFV 164

Query: 1054 DEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPG 875
            DEKKAQ+LK+K LPLE C +VAGRTDKGVTAL QVC+FYTWRKD+   DIE+A+  AA G
Sbjct: 165  DEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQVCSFYTWRKDITCQDIEEAINNAALG 224

Query: 874  KIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGE 695
            K++  SVS+VSR FHPNFSAKWR Y YIFPFNDE ED+E S     NL+     +   GE
Sbjct: 225  KLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDE-EDEEQSNKNGENLETYEKIESGCGE 283

Query: 694  RLSEQTCEDGDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIG 515
               E       DD  E  +SG KP +F VSRV+ LL  LEGKLLS++MFARDTKASRN G
Sbjct: 284  WNDESFGNLIIDD-SEELESGKKPSSFSVSRVDQLLRLLEGKLLSYKMFARDTKASRNEG 342

Query: 514  PPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXXXXXXXXXX 335
            PPTECF++HARAAEA LP      G K+MCVELVANRFLRKMVRVLV             
Sbjct: 343  PPTECFIYHARAAEARLPTSDCTEGRKIMCVELVANRFLRKMVRVLVATSIREAAAGAEE 402

Query: 334  XALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
             AL+KLMD            PDGLCLVDVGY+EF    CLI
Sbjct: 403  DALLKLMDATCRRATAPPAPPDGLCLVDVGYSEFKPNNCLI 443


>ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
            gi|462419663|gb|EMJ23926.1| hypothetical protein
            PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score =  421 bits (1083), Expect = e-115
 Identities = 225/409 (55%), Positives = 275/409 (67%), Gaps = 12/409 (2%)
 Frame = -1

Query: 1402 DACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGK----EVNTNDGAEII 1235
            D CS  RWT +E ++FM ARPW +V DFY D V  R+ L  L GK    + N N+  E +
Sbjct: 13   DPCSFARWTTKECFQFMSARPWQQVMDFYSDVVKDRKPLSALLGKACLSKSNINNRLESL 72

Query: 1234 DESDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFV 1055
                       P++ + GRW R+TFKI++SY+G SFDGWQ+QP LNTVQ +VE +LGKFV
Sbjct: 73   P----------PSQDKGGRWARLTFKIVVSYHGGSFDGWQRQPGLNTVQSVVEKSLGKFV 122

Query: 1054 DEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPG 875
            DE+KAQ+LK+K LPLEG ALVAGRTDKGVTA+ QVC+FYTWRKDVK+ DI DA+ +AAPG
Sbjct: 123  DERKAQMLKDKGLPLEGAALVAGRTDKGVTAVHQVCSFYTWRKDVKSQDITDAINSAAPG 182

Query: 874  KIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDDPYGE 695
            K+RV SV++VSR FHPNF+AKWRHY YIFPFNDE ED E S     N       ++ +  
Sbjct: 183  KLRVVSVTEVSRAFHPNFTAKWRHYLYIFPFNDE-EDMEQSNQSGENAQNFKSLENYHEH 241

Query: 694  RLSEQTCED--------GDDDYVETQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARD 539
            +     C +         D++ +ET     KP  F VSRVN LL +LEGKLLS++MFARD
Sbjct: 242  KNGCDQCNEANVGNLVINDNEDLET----LKPREFTVSRVNQLLQKLEGKLLSYKMFARD 297

Query: 538  TKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLVXXXXX 359
            TK SRN GPPTECF++HARA E+ LPC +   G +VMC+ELVANRFLR+MVRVLV     
Sbjct: 298  TKPSRNEGPPTECFLYHARAKESKLPCSEHEKGRRVMCIELVANRFLRRMVRVLVATSIR 357

Query: 358  XXXXXXXXXALIKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFDKKFCLI 212
                     AL+KLMD            PDGLCLVDVGY EFD + CLI
Sbjct: 358  EAAAGADEDALLKLMDATCRRATAPPAPPDGLCLVDVGYEEFDPQDCLI 406