BLASTX nr result

ID: Mentha28_contig00018567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00018567
         (467 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    96   5e-18
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    62   1e-10
ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    61   8e-08

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 51/76 (67%), Positives = 53/76 (69%), Gaps = 9/76 (11%)
 Frame = -1

Query: 308 LDSRIFCFSGGGEQWCLRCSRCPP-------ERTAH*LAGL--GGPIWRHTENHAFRTER 156
           LDSRIFCFSGGGEQ  LRC RCPP        R    LA    GGPI RHTENHAFRTER
Sbjct: 52  LDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTSGGPIRRHTENHAFRTER 111

Query: 155 NARLPNQNKKGLVGKK 108
           NARLP + K GLVGK+
Sbjct: 112 NARLPKKKKNGLVGKR 127


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 62.0 bits (149), Expect(2) = 1e-10
 Identities = 36/77 (46%), Positives = 39/77 (50%)
 Frame = +1

Query: 235 SGGHLLQRKHHCSPPPEKQKIRESRLKIHA*IVV*CQGRRRKLGTEPYEAKVSRTVL*EG 414
           +GGHL QRK HCSPPP+KQKIRES                                    
Sbjct: 294 TGGHLPQRKLHCSPPPDKQKIRES------------------------------------ 317

Query: 415 SGYLLELRPTTTGQFRF 465
           SGYLLELRPTTTG+FRF
Sbjct: 318 SGYLLELRPTTTGKFRF 334



 Score = 29.6 bits (65), Expect(2) = 1e-10
 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
 Frame = +2

Query: 170 RHGFQYVSR*G---PLVRLASERFFRA 241
           RH F  + + G   PLVRLASERFFRA
Sbjct: 261 RHFFGPLKKKGNGPPLVRLASERFFRA 287


>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491 [Sorghum bicolor]
          Length = 289

 Score = 60.8 bits (146), Expect(2) = 8e-08
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -1

Query: 326 YACIFSLDSRIFCFSGGGEQWCLRCSRCPP 237
           YAC+F LDSRIFCFSGGGEQ  LRC RCPP
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPP 268



 Score = 21.2 bits (43), Expect(2) = 8e-08
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 345 LALDHYLCMY 316
           L+LDHY C++
Sbjct: 234 LSLDHYACLF 243