BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00018256
         (911 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus...   370   e-100
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   300   5e-79
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun...   296   8e-78
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun...   296   8e-78
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   292   1e-76
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   288   3e-75
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   286   1e-74
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [...   285   1e-74
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           278   3e-72
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   275   2e-71
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...   273   5e-71
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   269   1e-69
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   267   5e-69
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps...   265   2e-68
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   263   9e-68
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr...   258   3e-66
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...   255   1e-65
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   252   2e-64
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...   243   6e-62
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit...   239   1e-60

>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus guttatus]
          Length = 457

 Score =  370 bits (949), Expect = e-100
 Identities = 195/289 (67%), Positives = 227/289 (78%), Gaps = 6/289 (2%)
 Frame = +2

Query: 62  LLRRWQPNAAAPGCGIAFNKAIYVRQCCYSAAAATNSENSDKEKNI-QWLILPPFTPTAD 238
           + R  +P+AA  G      KAI      Y+ AA   +EN +KEKN  QWL LPPF P AD
Sbjct: 1   MFRHLRPSAAVSGVRGMSTKAINEHTRYYATAAT--AENCEKEKNYDQWLTLPPFNPNAD 58

Query: 239 GSSIGKKLYGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQV-----RKECSSAETN 403
           G SIGK+L G+P +   TTALKWILKCCPH+PR LVQKLFRLRQV     RKE S+ E  
Sbjct: 59  GCSIGKRLSGQPADAK-TTALKWILKCCPHIPRCLVQKLFRLRQVHFLLIRKESSNMEDK 117

Query: 404 EQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLELYKDSAII 583
           EQRP+R+GAKDLM IGDRI+LPKSVD  S  TTA++++F  E++ +FV+SLELYKD AII
Sbjct: 118 EQRPKRIGAKDLMDIGDRIFLPKSVDGTSPSTTAESRNFFDEKEMEFVRSLELYKDPAII 177

Query: 584 VINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTT 763
           VINKPPG+PVQGG+GI+RSLDELAAKYL++D  E PRLVHRLDRDSSGILVMGRTQLSTT
Sbjct: 178 VINKPPGLPVQGGIGIKRSLDELAAKYLKFDFTESPRLVHRLDRDSSGILVMGRTQLSTT 237

Query: 764 VLHSVFREKTIGAFNDVLGGKNILQKRYLALVIGSPRRRQGSISVPLMK 910
           +LHSVFREKT GA N+V G K ILQK+Y ALVIGSPRRR+G ISVPL+K
Sbjct: 238 ILHSVFREKTFGASNNVCGNKKILQKKYWALVIGSPRRREGLISVPLVK 286


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 476

 Score =  300 bits (768), Expect = 5e-79
 Identities = 165/300 (55%), Positives = 211/300 (70%), Gaps = 12/300 (4%)
 Frame = +2

Query: 47  MALRLLLRR--WQPNAAAPGCGIAFNKAIYVRQCCYSAAAATNSENSDKEKN-IQWLILP 217
           M  RLLLRR   +P  ++     A ++  +     + + + T + + DK+K   +W  LP
Sbjct: 1   MPNRLLLRRILLRPPLSSSSAESAVDRIFHT----FRSYSTTQTVHEDKQKRGNKWFTLP 56

Query: 218 PFTPTADGSSIGKKL--------YGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQV 373
           PFT T +G+++G++L        Y +P   +ATTALKW+ +CCP +PR+LVQKLFRLRQV
Sbjct: 57  PFTDTVNGAALGRELSRSVGRDVYAKPSAAAATTALKWVTRCCPEIPRNLVQKLFRLRQV 116

Query: 374 RKECSSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQS 553
           R+E S  + + Q  +RVG KD M +GDRI LP SV E   P     +   SEE+ +F++S
Sbjct: 117 RREASDMDQSVQPLKRVGTKDSMNLGDRICLPISVKE--FPDHKQKEGHCSEEEAEFIRS 174

Query: 554 LELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGIL 733
           L LYKD AIIVINKPPG+PVQGG+GI+RSLDELAA  L YD  +PPRLVHRLDRD SGIL
Sbjct: 175 LVLYKDPAIIVINKPPGLPVQGGIGIKRSLDELAATCLSYDLSQPPRLVHRLDRDCSGIL 234

Query: 734 VMGRTQLSTTVLHSVFREKTIGAFNDVL-GGKNILQKRYLALVIGSPRRRQGSISVPLMK 910
           VMGRTQ S TVLHSVFREKT GA +DV+   K+ILQ+RYLALVIGSPR+++G ISVPL K
Sbjct: 235 VMGRTQTSATVLHSVFREKTFGASDDVIKHAKSILQRRYLALVIGSPRQQEGLISVPLGK 294


>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395210|gb|EMJ01009.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score =  296 bits (758), Expect = 8e-78
 Identities = 175/313 (55%), Positives = 209/313 (66%), Gaps = 27/313 (8%)
 Frame = +2

Query: 53  LRLLLRRWQPNAAAPGCGIAFNKAIYVRQCCYSAAAATNSENSDKEKNIQ-WLILPPFTP 229
           LR LL R  P++ A  C  AF+         + + A T + + D+EK  + W  LPPFT 
Sbjct: 7   LRRLLLRPPPSSTARLCISAFHN--------WRSYATTETFHEDREKRGEKWFTLPPFTA 58

Query: 230 TADGSSIGKKL-----YGRPEET---------SATTALKWILKCCPHLPRSLVQKLFRLR 367
           T +GS++GK+L     YGR   T         + TTALKW+ +CCP LPRSLVQKLFRLR
Sbjct: 59  TINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLFRLR 118

Query: 368 QVRKE-----CSS--AETNEQRPRRVGAKDLMGIGDRIYLPKSVDE----RSHPTTADNQ 514
           QVR+E     CS    E  E+  +RV AKD M +GDRI+LP SV E    +        +
Sbjct: 119 QVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPNDKQELPNDKKE 178

Query: 515 SFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPR 694
            + SEE+  F++SLELYKD AIIVINKPPGMPVQGG+GI+RSLDELAA  L YD  EPPR
Sbjct: 179 CYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAAACLSYDFSEPPR 238

Query: 695 LVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAFNDVL-GGKNILQKRYLALVIGSP 871
           LVHRLDRDSSGILVMGRTQ S TVLHS+FREKT GA ND +   K ILQ+RY ALVIGSP
Sbjct: 239 LVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDEIDDAKRILQRRYWALVIGSP 298

Query: 872 RRRQGSISVPLMK 910
           R+R+G IS PL K
Sbjct: 299 RQRKGLISAPLGK 311


>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395209|gb|EMJ01008.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score =  296 bits (758), Expect = 8e-78
 Identities = 175/313 (55%), Positives = 209/313 (66%), Gaps = 27/313 (8%)
 Frame = +2

Query: 53  LRLLLRRWQPNAAAPGCGIAFNKAIYVRQCCYSAAAATNSENSDKEKNIQ-WLILPPFTP 229
           LR LL R  P++ A  C  AF+         + + A T + + D+EK  + W  LPPFT 
Sbjct: 7   LRRLLLRPPPSSTARLCISAFHN--------WRSYATTETFHEDREKRGEKWFTLPPFTA 58

Query: 230 TADGSSIGKKL-----YGRPEET---------SATTALKWILKCCPHLPRSLVQKLFRLR 367
           T +GS++GK+L     YGR   T         + TTALKW+ +CCP LPRSLVQKLFRLR
Sbjct: 59  TINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLFRLR 118

Query: 368 QVRKE-----CSS--AETNEQRPRRVGAKDLMGIGDRIYLPKSVDE----RSHPTTADNQ 514
           QVR+E     CS    E  E+  +RV AKD M +GDRI+LP SV E    +        +
Sbjct: 119 QVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRIHLPLSVQEFPNDKQELPNDKKE 178

Query: 515 SFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPR 694
            + SEE+  F++SLELYKD AIIVINKPPGMPVQGG+GI+RSLDELAA  L YD  EPPR
Sbjct: 179 CYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIGIKRSLDELAAACLSYDFSEPPR 238

Query: 695 LVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAFNDVL-GGKNILQKRYLALVIGSP 871
           LVHRLDRDSSGILVMGRTQ S TVLHS+FREKT GA ND +   K ILQ+RY ALVIGSP
Sbjct: 239 LVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASNDEIDDAKRILQRRYWALVIGSP 298

Query: 872 RRRQGSISVPLMK 910
           R+R+G IS PL K
Sbjct: 299 RQRKGLISAPLGK 311


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  292 bits (747), Expect = 1e-76
 Identities = 160/293 (54%), Positives = 204/293 (69%), Gaps = 7/293 (2%)
 Frame = +2

Query: 53  LRLLLRRWQPNAAAPGCGIAFNKAIYVRQCCYSAAA-ATNSENSDKEKNIQWLILPPFTP 229
           LR ++ R +   AA         A Y  QC Y+    A    N ++ +  +WL LPPFT 
Sbjct: 7   LRRVVHRSRQLFAASDDVQTLYSAFYRFQCHYATTVTAAQVCNRNENEKAKWLTLPPFTA 66

Query: 230 TADGSSIGKKLYG-----RPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSSA 394
           T +G+++G++L G     +   T+  TALKW+ +CCP LP+SLVQKLFRLRQVR++ S+ 
Sbjct: 67  TVNGAALGRELAGVKMDVKENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRDSSNV 126

Query: 395 ETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLELYKDS 574
           E  EQRP+RV AK+ M +GDRI+LP +V +   P+       SSEE+RKFV SLELYKD 
Sbjct: 127 E--EQRPKRVSAKESMNVGDRIFLPITVQK--FPSEKVVYYPSSEEERKFVHSLELYKDP 182

Query: 575 AIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQL 754
            I+V+NKPPGMPVQGG+GI+RSLDELAAKY+R+++ E PRLVHRLDRD SG+LVMGRTQL
Sbjct: 183 EIVVVNKPPGMPVQGGIGIKRSLDELAAKYMRHEYSEAPRLVHRLDRDCSGLLVMGRTQL 242

Query: 755 STTVLHSVFREKTIGAFN-DVLGGKNILQKRYLALVIGSPRRRQGSISVPLMK 910
           S + LHS+FREKT  + N D+   K ILQK+Y ALVIG PRR  G IS PL K
Sbjct: 243 SASALHSIFREKTFDSQNEDLESKKRILQKKYWALVIGCPRRSGGIISAPLGK 295


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score =  288 bits (736), Expect = 3e-75
 Identities = 155/271 (57%), Positives = 196/271 (72%), Gaps = 8/271 (2%)
 Frame = +2

Query: 122 AIYVRQCCYSAAAATNSE--NSDKEKNIQWLILPPFTPTADGSSIGKKLYG-----RPEE 280
           A Y  QC Y A   T+++  N ++ +  +WL LPPFT   +G+++G++L G         
Sbjct: 30  AFYRLQCHY-ATTVTDAQVCNRNENEKAKWLTLPPFTAAVNGAALGRELAGVKMDVNENS 88

Query: 281 TSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSSAETNEQRPRRVGAKDLMGIGDRI 460
           T+  TALKW+ +CCP LP+SLVQKLFRLRQVR++ S+ E  EQRP+RV AK+ M +GDRI
Sbjct: 89  TNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRDSSNVE--EQRPKRVSAKESMNVGDRI 146

Query: 461 YLPKSVDERSHPTTADNQSFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRS 640
           +LP +V +   P+       SSEE+RKFV SLELYKD+ IIV+NKPPGMPVQGG+GI+RS
Sbjct: 147 FLPITVQK--FPSEKVVYYPSSEEERKFVHSLELYKDAEIIVVNKPPGMPVQGGIGIKRS 204

Query: 641 LDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAFN-DVL 817
           LDELAAKY+ + + E PRLVHRLDRD SG+LVMGRTQLS + LHS+FREKT  + N D+ 
Sbjct: 205 LDELAAKYMSHQYSEAPRLVHRLDRDCSGLLVMGRTQLSASALHSIFREKTFDSQNEDLE 264

Query: 818 GGKNILQKRYLALVIGSPRRRQGSISVPLMK 910
             K ILQK+Y ALVIG PRR  G IS PL K
Sbjct: 265 SKKRILQKKYWALVIGCPRRSGGIISAPLGK 295


>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  286 bits (731), Expect = 1e-74
 Identities = 157/279 (56%), Positives = 197/279 (70%), Gaps = 16/279 (5%)
 Frame = +2

Query: 122 AIYVRQCCYSAAAATNSENSDKEKNIQWLILPPFTPTADGSSIGKKLYGRPEETS----- 286
           A+  ++ C++ +    SE + K K  +W  LP FTP  D SS+GK L G   + +     
Sbjct: 30  ALDQQRSCFATSNDAVSE-AHKSKKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTT 88

Query: 287 ---ATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSSAETN-------EQRPRRVGAKD 436
              +TTALKW+++CCP LPRSLVQKLFRLRQVR+E  +  T+       E R +RV AKD
Sbjct: 89  AGASTTALKWVVRCCPQLPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVAAKD 148

Query: 437 LMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQ 616
           LM +GD+I LP +V+E     +  ++   ++E+  FV +LELYKD AIIV+NKPPG+PVQ
Sbjct: 149 LMNLGDQILLPITVEEFP---SEKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGLPVQ 205

Query: 617 GGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTI 796
           GG+GI+RSLDELAA YLRYD  EPPRLVHRLDRDSSGIL+MGRTQ S T+LHS+FREKT 
Sbjct: 206 GGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSIFREKTF 265

Query: 797 GAF-NDVLGGKNILQKRYLALVIGSPRRRQGSISVPLMK 910
           GA  ND+   K ILQ+RY ALVIGSPRR +G IS PL K
Sbjct: 266 GASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGK 304


>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
           gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
           synthase, putative [Theobroma cacao]
          Length = 477

 Score =  285 bits (730), Expect = 1e-74
 Identities = 164/302 (54%), Positives = 204/302 (67%), Gaps = 16/302 (5%)
 Frame = +2

Query: 53  LRLLLRRWQPNAAAPGCGIAFNKAIYVRQCCYSAAAATNSE------NSDKEKNIQWLIL 214
           LR LLR  +P A   G G+  + A +  +  YS     ++E      NS+K+K  +W  L
Sbjct: 8   LRRLLRSSRPPATHGGNGLIVS-AFHQLRYHYSTTNELSAEHLKDDGNSEKKKKNKWFTL 66

Query: 215 PPFTPTADGSSIGKKLYGRPEETSA--TTALKWILKCCPHLPRSLVQKLFRLRQVRKEC- 385
           PPFT T + S +G KL G+P   +A  TTA+KW+++CCP LPRSLVQKLFRLRQVR+E  
Sbjct: 67  PPFTKTVNASVLGAKLSGKPHSKAANETTAVKWVMRCCPELPRSLVQKLFRLRQVRRESH 126

Query: 386 ------SSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFV 547
                    +    + +RVGAKD + IGDRI+LP SV E         +S  +EE+  F+
Sbjct: 127 VLEVAGDGCQVQTVQLKRVGAKDALNIGDRIFLPFSVREFREEK---QESGCTEEELNFI 183

Query: 548 QSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSG 727
           + LELYKD AIIV+NKPPGMPVQGG+GI+ SLD+LAA  L +D+ EPPRLVHRLDRDSSG
Sbjct: 184 RGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLDKLAAACLCFDYSEPPRLVHRLDRDSSG 243

Query: 728 ILVMGRTQLSTTVLHSVFREKTIGAF-NDVLGGKNILQKRYLALVIGSPRRRQGSISVPL 904
           ILVMGRTQ+S T+LHSVFRE+T  A  +DV   K ILQKRY ALVIGSPRR +G I  PL
Sbjct: 244 ILVMGRTQMSATILHSVFREETNDASKDDVDNEKRILQKRYWALVIGSPRRPKGMIVAPL 303

Query: 905 MK 910
            K
Sbjct: 304 RK 305


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  278 bits (710), Expect = 3e-72
 Identities = 146/261 (55%), Positives = 182/261 (69%), Gaps = 17/261 (6%)
 Frame = +2

Query: 179 SDKEKNIQWLILPPFTPTADGSSIGKKLYGRPEE---------TSATTALKWILKCCPHL 331
           S ++   +W  LPP T T DG+ +GK + G  ++         ++ATTALKW+++CCP L
Sbjct: 41  SSEKNGTKWFTLPPHTATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCPEL 100

Query: 332 PRSLVQKLFRLRQVRKECSSAET-------NEQRPRRVGAKDLMGIGDRIYLPKSVDERS 490
           PRSLVQKLFRLRQVR+E  + E         + R RRV AKD + +GD+I+LP SV E  
Sbjct: 101 PRSLVQKLFRLRQVRRESFNVEDCNAGDQLGKPRLRRVSAKDSLNLGDKIFLPISVKELP 160

Query: 491 HPTTADNQSFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLR 670
                  + F +EE+ KF++SLELYKD AI+V+NKPPG+PVQGG+GI+ SLD+LA   L 
Sbjct: 161 ---VEKKECFCNEEEVKFIRSLELYKDPAIVVVNKPPGLPVQGGIGIKTSLDQLAVTCLS 217

Query: 671 YDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAFND-VLGGKNILQKRY 847
           YD+ EPPRLVHRLDRD SGILVMGRTQ S TVLHS+FREKT GA ND  + GK +LQ+RY
Sbjct: 218 YDYTEPPRLVHRLDRDCSGILVMGRTQTSATVLHSIFREKTFGASNDETVKGKIVLQRRY 277

Query: 848 LALVIGSPRRRQGSISVPLMK 910
            A VIGSPR   G IS PL K
Sbjct: 278 WAFVIGSPRHPNGLISAPLRK 298


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  275 bits (702), Expect = 2e-71
 Identities = 160/323 (49%), Positives = 209/323 (64%), Gaps = 25/323 (7%)
 Frame = +2

Query: 17  VKTRNFEP*IMALRLLLRRWQPNAAAPGCG----IAFNKAIYVRQCCYSAAAAT------ 166
           ++ +N    +   +L L R +P +A  G      ++ + + +  Q CY+    T      
Sbjct: 4   IRNQNLTEMLFCRKLPLLRSRPFSALHGVARQAILSPSSSFHHHQSCYATKTLTRNNKTH 63

Query: 167 -----NSENSDKEKNIQWLILPPFTPTADGSSIGKKLYGRPEET--SATTALKWILKCCP 325
                ++ N D E+  +W  LPPFT T DGS++G++L   P ++  S TTALKW+L+CCP
Sbjct: 64  INNCDDNNNGDDERRGKWFTLPPFTSTIDGSALGRQL-ACPSKSPISETTALKWVLQCCP 122

Query: 326 HLPRSLVQKLFRLRQVRKECSSAETN-------EQRPRRVGAKDLMGIGDRIYLPKSVDE 484
            LPR+ VQKLFRL QVR+E  S +++       E + +RV AKD + +GDRI+LP S+ E
Sbjct: 123 GLPRNFVQKLFRLSQVRRESPSLDSSANEGHEQEIKLKRVAAKDSLKLGDRIFLPISIQE 182

Query: 485 RSHPTTADNQSFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKY 664
                +   +   +EE+  F+QSLELYKDSAIIVINKP GMPVQGG+GIRRS+DELAA  
Sbjct: 183 SP---SRKEKCPCTEEEVGFIQSLELYKDSAIIVINKPHGMPVQGGIGIRRSIDELAATC 239

Query: 665 LRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAF-NDVLGGKNILQK 841
           L YD+ EPPRLVHRLDRDSSGILVMGRTQ S TVLHS+FREKT  A   D    K ILQ+
Sbjct: 240 LTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFSASKEDNDNEKRILQR 299

Query: 842 RYLALVIGSPRRRQGSISVPLMK 910
            Y ALV+G+PR  +G IS PL K
Sbjct: 300 WYWALVVGTPRCSKGVISAPLRK 322


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score =  273 bits (699), Expect = 5e-71
 Identities = 151/261 (57%), Positives = 185/261 (70%), Gaps = 12/261 (4%)
 Frame = +2

Query: 164 TNSENS-DKEKNIQWLILPPFTPTADGSSIGKKLYGR--PEETSATTALKWILKCCPHLP 334
           T S+N  + +K  +W  LPP+T T +GS +G  L  R   +  S TTALKW+L+CCP LP
Sbjct: 44  TKSQNHYENDKRGKWFTLPPYTSTINGSVLGIALSARIPAKSASETTALKWVLRCCPELP 103

Query: 335 RSLVQKLFRLRQVRKECSSAET-------NEQRPRRVGAKDLMGIGDRIYLPKSVDERSH 493
           R+LVQKLFRLRQVR+E    E+        E R +RV AKD M +GDRI+LP SV     
Sbjct: 104 RNLVQKLFRLRQVRRESPVMESCNLGDQGQEHRLKRVAAKDSMDVGDRIFLPISVKV--- 160

Query: 494 PTTADNQS-FSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLR 670
              A+ Q    +EE+  F++ LELYKD+AIIV+NKPPGMPVQGG+GI+RSLDEL+A    
Sbjct: 161 -LPAEKQDCHCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQGGIGIKRSLDELSASCFS 219

Query: 671 YDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAFNDVLGGK-NILQKRY 847
            D+ EPPRLVHRLDRD SGILVMGRTQ S TVLH++FREKT+ A ND +G K  ILQ++Y
Sbjct: 220 SDYSEPPRLVHRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASNDDVGNKRRILQRKY 279

Query: 848 LALVIGSPRRRQGSISVPLMK 910
            ALVIGSPRR +G IS PL K
Sbjct: 280 WALVIGSPRRPKGLISAPLGK 300


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  269 bits (687), Expect = 1e-69
 Identities = 146/259 (56%), Positives = 182/259 (70%), Gaps = 5/259 (1%)
 Frame = +2

Query: 149 SAAAATNSENSDKEKNIQWLILPPFTPTADGSSIGKKLYGRP--EETSATTALKWILKCC 322
           S+     S+N+ K    ++  LPP+T T  GS++GK L      + ++ TTALKW+L+CC
Sbjct: 111 SSTKDQTSKNNTKNTG-KFFTLPPYTSTISGSALGKALSATATAKASTETTALKWVLRCC 169

Query: 323 PHLPRSLVQKLFRLRQVRKECSSAETNEQ--RPRRVGAKDLMGIGDRIYLPKSVDERSHP 496
           P LPR+LVQKLFRLRQV++E  +    E   + +RV AKDLM +GDRI+LP SV      
Sbjct: 170 PELPRNLVQKLFRLRQVKRELLNVGDGEMEHKTKRVAAKDLMNVGDRIFLPISVQALPFE 229

Query: 497 TTADNQSFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYD 676
                +    E++  F++ LELYKD AIIV+NKPPGMPVQGG+GI+ S DELAA  L YD
Sbjct: 230 K---QKCHCGEKEANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFDELAASCLSYD 286

Query: 677 HMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAFNDVLG-GKNILQKRYLA 853
           + EPPRLVHRLDRDSSGILVMGRTQ ST VLHSVFREKT  A N  +G  + ILQ++Y A
Sbjct: 287 YSEPPRLVHRLDRDSSGILVMGRTQTSTMVLHSVFREKTFAASNHDIGERRRILQRKYWA 346

Query: 854 LVIGSPRRRQGSISVPLMK 910
           LVIGSPRR++G IS PL K
Sbjct: 347 LVIGSPRRQKGIISAPLGK 365


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  267 bits (682), Expect = 5e-69
 Identities = 153/310 (49%), Positives = 203/310 (65%), Gaps = 22/310 (7%)
 Frame = +2

Query: 47  MALRLLLR-----RWQPNAAAPGCGIAFNKAIYVRQCCYSAAAATN--SENSDKEKNIQW 205
           M LR L R     R  P+   P   I +    +V +   + + A+   S+  +++ + +W
Sbjct: 1   MGLRALFRPSVILRTSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRW 60

Query: 206 LILPPFTPTADGSSIGKKLY---GRPE---ETSATTALKWILKCCPHLPRSLVQKLFRLR 367
             LPP+T T +GS +G ++    G+ E    T+A TALKW+++CCP LPRSLVQKLFRLR
Sbjct: 61  FTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLR 120

Query: 368 QVRKECSSAETNE------QRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSE 529
           +VR+  S  E +E       + +RV AKD++ +GD+I+LP SV   S   T D   + ++
Sbjct: 121 KVRRGSSMIENSEYNLEARDQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRD---YCNK 177

Query: 530 EDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPRLVHRL 709
           E+  F+ SL L+KD AI+VINKPPG+PVQGG+G++RSLDELAA  L Y + EPPRLVHRL
Sbjct: 178 EEETFMHSLVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRL 237

Query: 710 DRDSSGILVMGRTQLSTTVLHSVFREKTIGA---FNDVLGGKNILQKRYLALVIGSPRRR 880
           DRDSSGIL+MGRT  ST++LHSVFREKT  A    N V   K IL KRY ALVIGSPRR 
Sbjct: 238 DRDSSGILIMGRTSTSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRS 297

Query: 881 QGSISVPLMK 910
           +G I+ PL K
Sbjct: 298 KGLITAPLGK 307


>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
           gi|482566291|gb|EOA30480.1| hypothetical protein
           CARUB_v10013603mg [Capsella rubella]
          Length = 476

 Score =  265 bits (677), Expect = 2e-68
 Identities = 151/278 (54%), Positives = 189/278 (67%), Gaps = 15/278 (5%)
 Frame = +2

Query: 122 AIYVRQC-CYSAAAATNSENSDKEKNIQWLILPPFTPTADGSSIGKKLYGRPE------E 280
           A   +QC  YS A   N+         +WL LPPF+PT DG+++GK+L    +      +
Sbjct: 34  AAAAQQCRSYSPAQTDNARG-------KWLTLPPFSPTVDGTAVGKELASEGDSITGSTD 86

Query: 281 TSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE----CSSAETNEQRPRRVGAKDLMGI 448
           +S TTAL+WIL+C P LPR+LVQKLFRLRQVR+E    C   E    + +RV AK+ + +
Sbjct: 87  SSTTTALRWILRCRPDLPRTLVQKLFRLRQVRREMSVSCDGDEVQRSQLKRVAAKESLNV 146

Query: 449 GDRIYLPKSVDERSHPTTADNQSFS-SEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGV 625
           GDRIYLP SVD  + P  A  +SF  SEE+RKFV SL LYKD +IIV+NKP GM VQGG 
Sbjct: 147 GDRIYLPLSVDNDAPPPPAKKESFRCSEEERKFVCSLVLYKDPSIIVLNKPHGMAVQGGT 206

Query: 626 GIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAF 805
           GI+ S+DELAA  L +D  E PRLVHRLDRD SG+LV+ RTQ + TVLHS+FREKT GA 
Sbjct: 207 GIKTSIDELAATCLTFDKSESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKTSGA- 265

Query: 806 NDVLG-GKNI--LQKRYLALVIGSPRRRQGSISVPLMK 910
               G  KNI  L+++Y+ALVIG PRR++G IS PL K
Sbjct: 266 -SAYGVKKNIKSLKRKYMALVIGCPRRQRGQISAPLRK 302


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score =  263 bits (671), Expect = 9e-68
 Identities = 150/305 (49%), Positives = 200/305 (65%), Gaps = 17/305 (5%)
 Frame = +2

Query: 47  MALRLLLR-----RWQPNAAAPGCGIAFNKAIYVRQCCYSAAAATN--SENSDKEKNIQW 205
           M LR L R     R  P+   P   I +    +V +   + + A+   S+  +++ + +W
Sbjct: 1   MGLRALFRPSVILRTSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRW 60

Query: 206 LILPPFTPTADGSSIGKKLY---GRPE---ETSATTALKWILKCCPHLPRSLVQKLFRLR 367
             LPP+T T +GS +G ++    G+ E    T+A TALKW+++CCP LPRSLVQKLFRLR
Sbjct: 61  FTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLR 120

Query: 368 QVRKECSSAETNEQRP-RRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKF 544
           +V ++ +    N     +RV AKD++ +GD+I+LP SV   S   T D   + ++E+  F
Sbjct: 121 KVPRQLNVGCGNSHHQLKRVAAKDILNVGDQIFLPMSVQVFSTEKTRD---YCNKEEETF 177

Query: 545 VQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSS 724
           + SL L+KD AI+VINKPPG+PVQGG+G++RSLDELAA  L Y + EPPRLVHRLDRDSS
Sbjct: 178 MHSLVLHKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSS 237

Query: 725 GILVMGRTQLSTTVLHSVFREKTIGA---FNDVLGGKNILQKRYLALVIGSPRRRQGSIS 895
           GIL+MGRT  ST++LHSVFREKT  A    N V   K IL KRY ALVIGSPRR +G I+
Sbjct: 238 GILIMGRTSTSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLIT 297

Query: 896 VPLMK 910
            PL K
Sbjct: 298 APLGK 302


>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
           gi|557107647|gb|ESQ47954.1| hypothetical protein
           EUTSA_v10020633mg [Eutrema salsugineum]
          Length = 477

 Score =  258 bits (658), Expect = 3e-66
 Identities = 140/258 (54%), Positives = 179/258 (69%), Gaps = 11/258 (4%)
 Frame = +2

Query: 170 SENSDKEKNIQWLILPPFTPTADGSSIGKKLYGRPEETSA-----TTALKWILKCCPHLP 334
           +++ D +   +WL LPPF+PT D +++GK+L+   +   A     TTAL+WIL+C P LP
Sbjct: 47  ADDDDDDPRGKWLTLPPFSPTIDAAAVGKELFSDGDSVKASSDGSTTALRWILRCRPDLP 106

Query: 335 RSLVQKLFRLRQVRKE----CSSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTT 502
           R+LVQKLFRLRQVR+E    C   E    + +RV AK+ + +GDRIYLP SV+  + P  
Sbjct: 107 RTLVQKLFRLRQVRREMSLSCDGDELQRSQLKRVAAKESLNLGDRIYLPLSVNNDAPPPA 166

Query: 503 ADNQSFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHM 682
                  SEE+RKFV SL LYKD AIIV+NKP G+ VQGG GI+ S+DELAA  L +   
Sbjct: 167 KKESFCCSEEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGTGIKISIDELAATCLTFGKS 226

Query: 683 EPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAFNDVLGGKNI--LQKRYLAL 856
           E PRLVHRLDRD SG+LV+GRTQ + TVLHS+FREKT GA +     KNI  L+++YLAL
Sbjct: 227 ESPRLVHRLDRDCSGLLVLGRTQTAATVLHSIFREKTSGA-SAYSVKKNIKSLKRKYLAL 285

Query: 857 VIGSPRRRQGSISVPLMK 910
           VIG PRR++G IS PL K
Sbjct: 286 VIGCPRRQRGQISAPLRK 303


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 477

 Score =  255 bits (652), Expect = 1e-65
 Identities = 146/264 (55%), Positives = 184/264 (69%), Gaps = 15/264 (5%)
 Frame = +2

Query: 164 TNSENSDKEKNIQWLILPPFTPTADGSSIGKKLYGRPE------ETSATTALKWILKCCP 325
           + ++  D   N  WL LPPF+PT DG+++GK L    +      + S TTAL+WIL+C P
Sbjct: 44  STAQTDDSRGN--WLTLPPFSPTIDGTAVGKDLLSDGDSVKASTDNSKTTALRWILRCRP 101

Query: 326 HLPRSLVQKLFRLRQVRKECSSA----ETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSH 493
            LPR+LVQKLFRLRQVR++ S +    E    + +RV AK+ + +GDRIYLP SVD  + 
Sbjct: 102 DLPRTLVQKLFRLRQVRRQMSLSVDGHELQRSQLKRVAAKESLNVGDRIYLPLSVDNDTP 161

Query: 494 PTT-ADNQSFS-SEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYL 667
           PT  A  +SF  SEE+RKFV SL LYKD AIIV+NKP G+ VQGG GI+ S+DELAA  L
Sbjct: 162 PTPPAKKESFQCSEEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAATCL 221

Query: 668 RYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGAFNDVLG-GKNI--LQ 838
            +D  E PRLVHRLDRD SG+LV+ RTQ + TVLHS+FREKT GA     G  KNI  L+
Sbjct: 222 TFDKSESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKTCGA--SAYGVKKNIKSLK 279

Query: 839 KRYLALVIGSPRRRQGSISVPLMK 910
           ++Y+ALVIG PRR++G IS PL K
Sbjct: 280 RKYMALVIGCPRRQKGQISAPLRK 303


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
           gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
           pseudouridine synthase 4, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 4; AltName:
           Full=RNA-uridine isomerase 4; Flags: Precursor
           gi|11994467|dbj|BAB02469.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
           thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
           synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score =  252 bits (643), Expect = 2e-64
 Identities = 144/293 (49%), Positives = 192/293 (65%), Gaps = 13/293 (4%)
 Frame = +2

Query: 71  RWQPNAAAPGCGIAFNKAIYVRQCCYSAAAATNSENSDKEKNIQWLILPPFTPTADGSSI 250
           R Q  +++P      N    +    + +  + ++  +D  +  +WL LPPF+PT DG+++
Sbjct: 12  RRQLQSSSPTISTFKNPTKALSAAAHQSTRSYSTTQTDDSRG-KWLTLPPFSPTIDGTAV 70

Query: 251 GKKLYGRPE------ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSSA----ET 400
           GK L    +      + S TTAL+WIL+C P LPR+LVQKLFRLRQVR+E S +    E 
Sbjct: 71  GKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRREMSMSVDGDEL 130

Query: 401 NEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTT-ADNQSFS-SEEDRKFVQSLELYKDS 574
              + +RV AK+ + +GDRIYLP SVD  +  T  A  +SF  S+E+RKFV SL LYKD 
Sbjct: 131 QRSQLKRVAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDEERKFVCSLVLYKDP 190

Query: 575 AIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVMGRTQL 754
           AIIV+NKP G+ VQGG GI+ S+DELAA  L++D  E PRLVHRLDRD SG+LV+ RTQ 
Sbjct: 191 AIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLVHRLDRDCSGLLVLARTQT 250

Query: 755 STTVLHSVFREKTIGA-FNDVLGGKNILQKRYLALVIGSPRRRQGSISVPLMK 910
           + TVLHS+FREKT GA    V      L+++Y+ALVIG P R++G IS PL K
Sbjct: 251 AATVLHSIFREKTTGASAYGVKKNVKSLKRKYMALVIGCPPRQRGQISAPLRK 303


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score =  243 bits (621), Expect = 6e-62
 Identities = 129/263 (49%), Positives = 179/263 (68%), Gaps = 10/263 (3%)
 Frame = +2

Query: 152 AAAATNSENSDKEKNIQWLILPPFTPTADGSSIGKKLYGRPEETSATTALKWILKCCPHL 331
           +  A+  E+ +  +  +W  LP F   +   SI      +  +  +TTALKW+L+CCP +
Sbjct: 32  STTASLEEDKEVRRQCKWFTLPSFPGASLSPSIST---AKTAKAPSTTALKWVLRCCPQV 88

Query: 332 PRSLVQKLFRLRQVRKE--------CSSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDER 487
           PRSL+QKLFRLRQVRKE        C   +   Q+ +RV AKD +  GDRI+LP +V+  
Sbjct: 89  PRSLIQKLFRLRQVRKESLNPAIASCLHKQAQYQQIKRVFAKDTLNSGDRIFLPITVNPA 148

Query: 488 SHPTTADNQSFSSEEDRKFVQSLELYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYL 667
                 ++    ++E+ ++++SLE+YKD+AI+V+NKPPG+PVQGG G++ SLD L A  L
Sbjct: 149 ---VEVEDDYICNKEEMEYIRSLEVYKDAAIVVVNKPPGLPVQGGTGVKLSLDVLVASSL 205

Query: 668 RYDHMEPPRLVHRLDRDSSGILVMGRTQLSTTVLHSVFREKTIGA-FN-DVLGGKNILQK 841
           +YD+ E PRLVHRLD+DSSGILVMGRTQ STT+LHS+FR+KT GA FN D+   K IL++
Sbjct: 206 KYDYSEVPRLVHRLDQDSSGILVMGRTQESTTLLHSIFRDKTCGASFNVDIKNSKIILKR 265

Query: 842 RYLALVIGSPRRRQGSISVPLMK 910
           +Y ALVIG+P+  +G IS PL K
Sbjct: 266 KYWALVIGNPQPSEGLISAPLSK 288


>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 427

 Score =  239 bits (609), Expect = 1e-60
 Identities = 127/237 (53%), Positives = 164/237 (69%)
 Frame = +2

Query: 200 QWLILPPFTPTADGSSIGKKLYGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRK 379
           +WL LPP + ++  S    +L   P     TTALKW+++CCPHLPR+LV KLFRLRQVR 
Sbjct: 30  KWLTLPPVSASSSASVELNQLSSTP-----TTALKWVVRCCPHLPRALVHKLFRLRQVRI 84

Query: 380 ECSSAETNEQRPRRVGAKDLMGIGDRIYLPKSVDERSHPTTADNQSFSSEEDRKFVQSLE 559
             ++    +Q  +RV AKD +  GDRI LP+SV  +  PT     S  + +   F+++L 
Sbjct: 85  HPATV-IQQQTFKRVAAKDTLNTGDRILLPQSVKVKQTPT----HSHLTPQQINFIRTLV 139

Query: 560 LYKDSAIIVINKPPGMPVQGGVGIRRSLDELAAKYLRYDHMEPPRLVHRLDRDSSGILVM 739
           +YKD AI+V+NKPPGMPVQGG+ I+RSLD +AA  L Y + +PPRLVHRLDRD SGILVM
Sbjct: 140 IYKDPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVM 199

Query: 740 GRTQLSTTVLHSVFREKTIGAFNDVLGGKNILQKRYLALVIGSPRRRQGSISVPLMK 910
           GRT  STTVLHS+FREKT  A +D+   K ILQ+RY ALV+G PRR +G ++  L K
Sbjct: 200 GRTHTSTTVLHSIFREKTSRASDDIGKEKRILQRRYWALVLGCPRRPKGLVTASLGK 256