BLASTX nr result
ID: Mentha28_contig00018205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00018205
(425 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006399476.1| hypothetical protein EUTSA_v10014976mg [Eutr... 64 2e-08
gb|AFK39331.1| unknown [Lotus japonicus] 61 1e-07
gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [A... 60 3e-07
ref|XP_006399477.1| hypothetical protein EUTSA_v10014976mg [Eutr... 59 9e-07
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps... 59 9e-07
ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidop... 59 9e-07
ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata] g... 59 9e-07
gb|ACK44499.1| AT5G09920-like protein [Arabidopsis arenosa] 59 9e-07
ref|XP_007134240.1| hypothetical protein PHAVU_010G030200g [Phas... 58 1e-06
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 58 1e-06
gb|AFK35928.1| unknown [Lotus japonicus] 58 1e-06
ref|XP_003626908.1| DNA-directed RNA polymerase II subunit RPB4 ... 58 1e-06
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ... 58 1e-06
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin... 58 1e-06
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin... 58 1e-06
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527... 58 2e-06
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 58 2e-06
ref|XP_006428009.1| hypothetical protein CICLE_v10026735mg [Citr... 58 2e-06
ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isofor... 58 2e-06
ref|XP_004156236.1| PREDICTED: DNA-directed RNA polymerase II su... 58 2e-06
>ref|XP_006399476.1| hypothetical protein EUTSA_v10014976mg [Eutrema salsugineum]
gi|557100566|gb|ESQ40929.1| hypothetical protein
EUTSA_v10014976mg [Eutrema salsugineum]
Length = 137
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHL 329
VFEKSLQYVKRFSRYKNPDAVRQVREYP C +
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREYPLCKI 85
>gb|AFK39331.1| unknown [Lotus japonicus]
Length = 83
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPS 338
VFEKSLQYVKRFSRYKNPDAVRQVREYP+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREYPA 82
>gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua]
Length = 138
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S H A +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVRELLSRHQLA-----EFELCVLGNL 97
>ref|XP_006399477.1| hypothetical protein EUTSA_v10014976mg [Eutrema salsugineum]
gi|557100567|gb|ESQ40930.1| hypothetical protein
EUTSA_v10014976mg [Eutrema salsugineum]
Length = 138
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S H +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREILSRHQLT-----EFELCVLGNL 97
>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
gi|482557570|gb|EOA21762.1| hypothetical protein
CARUB_v10002229mg [Capsella rubella]
Length = 138
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S H +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREILSRHQLT-----EFELCVLGNL 97
>ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
gi|75098524|sp|O48890.1|NRPB4_ARATH RecName:
Full=DNA-directed RNA polymerase II subunit 4; AltName:
Full=15.9 kDa subunit of RNA polymerase II; AltName:
Full=DNA-directed RNA polymerase II subunit D
gi|2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|9758970|dbj|BAB09413.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|21554212|gb|AAM63291.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|98960869|gb|ABF58918.1| At5g09920 [Arabidopsis
thaliana] gi|222423668|dbj|BAH19801.1| AT5G09920
[Arabidopsis thaliana] gi|332004084|gb|AED91467.1| RNA
polymerase II, Rpb4, core protein [Arabidopsis thaliana]
Length = 138
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S H +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREILSRHQLT-----EFELCVLGNL 97
>ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata]
gi|297317229|gb|EFH47651.1| RPB15.9 [Arabidopsis lyrata
subsp. lyrata]
Length = 138
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S H +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREILSRHQLT-----EFELCVLGNL 97
>gb|ACK44499.1| AT5G09920-like protein [Arabidopsis arenosa]
Length = 321
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S H +F C++ N+
Sbjct: 201 VFEKSLQYVKRFSRYKNPDAVRQVREILSRHQLT-----EFELCVLGNL 244
>ref|XP_007134240.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
gi|561007285|gb|ESW06234.1| hypothetical protein
PHAVU_010G030200g [Phaseolus vulgaris]
Length = 138
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE + AR +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVRE-----ILARYQLAEFELCVLGNL 97
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum]
Length = 138
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE + AR +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVRE-----ILARYQLAEFELCVLGNL 97
>gb|AFK35928.1| unknown [Lotus japonicus]
Length = 138
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE + AR +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVRE-----ILARYQLAEFELCVLGNL 97
>ref|XP_003626908.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
gi|355520930|gb|AET01384.1| DNA-directed RNA polymerase
II subunit RPB4 [Medicago truncatula]
Length = 114
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE + AR +F C++ N+
Sbjct: 30 VFEKSLQYVKRFSRYKNPDAVRQVRE-----ILARYQLAEFELCVLGNL 73
>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
II subunit RPB4 [Medicago truncatula]
gi|388497296|gb|AFK36714.1| unknown [Medicago
truncatula]
Length = 138
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE + AR +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVRE-----ILARYQLAEFELCVLGNL 97
>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
gi|255632071|gb|ACU16388.1| unknown [Glycine max]
Length = 138
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE + AR +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVRE-----ILARYQLAEFELCVLGNL 97
>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
gi|255625623|gb|ACU13156.1| unknown [Glycine max]
Length = 138
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE + AR +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVRE-----ILARYQLAEFELCVLGNL 97
>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
max]
Length = 138
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE + AR +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVRE-----ILARYELAEFELCVLGNL 97
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S + A +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLA-----EFELCVLGNL 97
>ref|XP_006428009.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|557529999|gb|ESR41249.1| hypothetical protein
CICLE_v10026735mg [Citrus clementina]
Length = 114
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S + A +F C++ N+
Sbjct: 30 VFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLA-----EFELCVLGNL 73
>ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|590707933|ref|XP_007048136.1| RNA polymerase II,
Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700396|gb|EOX92292.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S + A +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLA-----EFELCVLGNL 97
>ref|XP_004156236.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Cucumis sativus]
Length = 139
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -2
Query: 424 VFEKSLQYVKRFSRYKNPDAVRQVREYPSCHLFARPWHLKFNFCLVINV 278
VFEKSLQYVKRFSRYKNPDAVRQVRE S + A +F C++ N+
Sbjct: 54 VFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLA-----EFELCVLGNL 97