BLASTX nr result

ID: Mentha28_contig00018068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00018068
         (475 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18211.1| hypothetical protein MIMGU_mgv1a000373mg [Mimulus...    97   2e-18
ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prun...    62   1e-07
emb|CBI17913.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]      58   1e-06
gb|EXC31206.1| DNA ligase 4 [Morus notabilis]                          57   3e-06

>gb|EYU18211.1| hypothetical protein MIMGU_mgv1a000373mg [Mimulus guttatus]
          Length = 1207

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
 Frame = -3

Query: 473  KISEYESDNDASLNDKEDFEVSNVASGSSDKVENRSRAASNQPRRTGARLRSKPVEITEN 294
            KI E ESD D S  +K+D         S++ VE ++++  N+P    A++++KP EI EN
Sbjct: 1006 KIHESESDKDVSSEEKKD---------STEIVEIKAKSDFNKPEER-AQIKTKPSEIVEN 1055

Query: 293  ESDEDGAVKEQTSDE---NFRLSTTNETEAPKDHILDRGKEVEKVVTESSNHTQKLDEVN 123
            E D     ++QT      N  L    + E  +D+  +RGK VE +V E S   Q+ D + 
Sbjct: 1056 ELDSRAFSEKQTQCSEIANLFLPGFQKQEEVEDYATERGKAVEPIVEEHSKFGQRFDGIK 1115

Query: 122  ESGT-GQSSSTHL---IEDNVDPIQAMLMDMIPMLARKKVE 12
            E G+ GQ S TH    IED VDP+QAML +M+P+LA KK E
Sbjct: 1116 EVGSSGQESGTHYSDRIEDAVDPVQAMLFNMLPILATKKAE 1156


>ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
           gi|462422140|gb|EMJ26403.1| hypothetical protein
           PRUPE_ppa002057mg [Prunus persica]
          Length = 723

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
 Frame = -3

Query: 374 NRSRAASNQPRRTGARLRSKPVEITENESDEDGA----VKEQTSDENFRLS--------T 231
           N+ +   NQ RRT  R+  KP +I+ NESDE G+    ++ +  D+  R           
Sbjct: 546 NKGKTGVNQARRTRVRIGRKPAKISGNESDEGGSHDNTLRAEEVDKEARKHGMMSDASLD 605

Query: 230 TNETEAPKD-HILDRGKEVEKVVTES---SNHTQKLDEVN---ESGTGQSSSTHLIEDNV 72
             E EA KD   L R     + V E     +H+ K+  V    +     S     +E   
Sbjct: 606 IQENEAIKDSESLQRDNAAVQEVAEDISFEDHSYKIPNVEMIEKCNIEDSGKPEKLEVMA 665

Query: 71  DPIQAMLMDMIPMLARKKVE 12
           DP+QAML DMIP LA KKVE
Sbjct: 666 DPVQAMLFDMIPSLAMKKVE 685


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 59/193 (30%), Positives = 82/193 (42%), Gaps = 40/193 (20%)
 Frame = -3

Query: 470  ISEYESDNDASLNDKEDFE---------VSNVASGSSDKVENRSRAAS----------NQ 348
            +   E+ N  S  DKE  +         +S +AS   D+   R R A           +Q
Sbjct: 935  LDSVENQNLVSFPDKEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQ 994

Query: 347  PRRTGARLRSKPVEITENESDEDGAVKEQTSDENFRLSTTN--------------ETEAP 210
             RRT  R+  KP +I ENESD   +  E+  +E  ++   +              ETE  
Sbjct: 995  ARRTRPRI-GKPPKIYENESDASDS-GEKMEEEGTKMGGNHAIHGVECKECPEIQETEIV 1052

Query: 209  KD-HILDRGKEVEKVVTESSNHTQKLDEV------NESGTGQSSSTHLIEDNVDPIQAML 51
            +D     RGK  EK V   +   + LD        +E+    S  T  +E  VDP+QAML
Sbjct: 1053 EDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAML 1112

Query: 50   MDMIPMLARKKVE 12
            +DMIP L  KK E
Sbjct: 1113 LDMIPSLGVKKAE 1125


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 59/193 (30%), Positives = 82/193 (42%), Gaps = 40/193 (20%)
 Frame = -3

Query: 470  ISEYESDNDASLNDKEDFE---------VSNVASGSSDKVENRSRAAS----------NQ 348
            +   E+ N  S  DKE  +         +S +AS   D+   R R A           +Q
Sbjct: 934  LDSVENQNLVSFPDKEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQ 993

Query: 347  PRRTGARLRSKPVEITENESDEDGAVKEQTSDENFRLSTTN--------------ETEAP 210
             RRT  R+  KP +I ENESD   +  E+  +E  ++   +              ETE  
Sbjct: 994  ARRTRPRI-GKPPKIYENESDASDS-GEKMEEEGTKMGGNHAIHGVECKECPEIQETEIV 1051

Query: 209  KD-HILDRGKEVEKVVTESSNHTQKLDEV------NESGTGQSSSTHLIEDNVDPIQAML 51
            +D     RGK  EK V   +   + LD        +E+    S  T  +E  VDP+QAML
Sbjct: 1052 EDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAML 1111

Query: 50   MDMIPMLARKKVE 12
            +DMIP L  KK E
Sbjct: 1112 LDMIPSLGVKKAE 1124


>gb|EXC31206.1| DNA ligase 4 [Morus notabilis]
          Length = 821

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 28/183 (15%)
 Frame = -3

Query: 473  KISEYESDNDASLNDKEDFEVSNVASGSSDKVE------NRSRAASNQPRRTGARLRSKP 312
            KIS  ESD+  S  +    E S     S   +       ++++  + Q RRT AR+  KP
Sbjct: 602  KISGNESDDSVSDEENTTKEESKQLGESHGNIVEEQSQISKAKGGAKQVRRTRARIGKKP 661

Query: 311  VEITENESDEDGAVKEQTSDE--NFRLSTTNETEAPKDHILDRGKEVEKVVTESSNHTQK 138
             +I+ NES+++ +  E T  E  N ++   +E            K +EK  +    +  K
Sbjct: 662  AKISGNESEDNASQDESTFKEPANKQIEDIHERIDIGTSQTRETKTIEKSESSEKGNADK 721

Query: 137  ----------LDEVNESGTGQSSST----------HLIEDNVDPIQAMLMDMIPMLARKK 18
                       ++V E+ T +  ++            +E   DP+ AML+DMIP L ++K
Sbjct: 722  QEGEGNIRYWFNKVPENETSEKQNSENSQPPPPPPEKLELMTDPVHAMLLDMIPRLGKEK 781

Query: 17   VEI 9
            VEI
Sbjct: 782  VEI 784


Top