BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00017482
         (2590 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   559   e-156
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   550   e-153
gb|AAB82754.1| retrofit [Oryza longistaminata]                        541   e-151
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   540   e-150
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   538   e-150
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   538   e-150
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  537   e-150
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   535   e-149
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   534   e-149
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   533   e-148
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   531   e-148
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   530   e-147
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   530   e-147
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   528   e-147
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   528   e-147
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   527   e-146
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   526   e-146
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   525   e-146
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   523   e-145
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   522   e-145

>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  559 bits (1440), Expect = e-156
 Identities = 286/530 (53%), Positives = 363/530 (68%), Gaps = 2/530 (0%)
 Frame = -1

Query: 1828 HHMVTRSKHGIFKPKQVFAVSV-LPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWSLV 1652
            H M+TRSK GIFKPK   A  + +P  PT  S AL+DP W +AM+ EF AL +N TW LV
Sbjct: 297  HPMITRSKAGIFKPKSFLAALLAIPSEPTSVSAALSDPKWFKAMQEEFQALQNNHTWDLV 356

Query: 1651 PYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRL 1472
              S  +KV+ NKWI+K+K  ADG++ + KARLVA+GF Q  G+DY ETFSPVVK +T+R+
Sbjct: 357  LPSEPIKVVGNKWIFKIKYHADGTISRYKARLVAKGFHQTQGVDYTETFSPVVKASTVRV 416

Query: 1471 VFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQA 1292
            + SLA    W ++Q+D+NNAFLNGIL +++YM QP GF D + P +VCKL+K+LYGLKQA
Sbjct: 417  ILSLAVMNKWELRQVDVNNAFLNGILVEDVYMGQPEGFIDPSRPLHVCKLKKALYGLKQA 476

Query: 1291 PRAWYDTLKKSLY-SLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKDAVMGVI 1115
            PRAW++ LK ++    GF+   SD SLF+K                 +TG     V  VI
Sbjct: 477  PRAWFERLKDAMVVKWGFQNSRSDNSLFYKWIGDQVIFVLVYVDDIIITGSSDKMVQQVI 536

Query: 1114 SMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDCKPCSTPMAIN 935
            + +Q  F LK LG +SYFLGIEVT + S   L Q KYI+++L + NM DC P  TPMA  
Sbjct: 537  TNMQNAFALKDLGKLSYFLGIEVTKTASGIYLSQSKYIADILAKHNMADCSPVPTPMATG 596

Query: 934  TKLSKFEGKLFSNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLL 755
              L+K  G + SN   Y+S VGALQY+TLTRP+IA+SVNKLSQF+ SP  EHW SCKRLL
Sbjct: 597  HYLTKGSGSVISNSSQYKSAVGALQYVTLTRPEIAFSVNKLSQFLASPTAEHWESCKRLL 656

Query: 754  RYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDV 575
            RYLKGT    LHF    +  I  FSD+DWA   D R+S  G+ V+ GSNLV WSSKKQ V
Sbjct: 657  RYLKGTIHFGLHFYHYGTMQINCFSDSDWACDKDDRKSVAGYAVYLGSNLVSWSSKKQAV 716

Query: 574  VSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVALSANPVFHART 395
            VSRSS E+EYRALA  TAEV W+ SL  EL I + +   +WCDN SA+AL+ NPV+HA+T
Sbjct: 717  VSRSSTEAEYRALAQATAEVTWIQSLLKELHIHLVTAPIMWCDNQSAIALAHNPVYHAKT 776

Query: 394  KHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRSKL 245
            KH+E+D+HF R+KV AK I V  +  ++Q AD+ TK LT  +F +LRSKL
Sbjct: 777  KHVELDIHFIRDKVTAKQITVQFIPSEDQNADVLTKALTFNQFHYLRSKL 826



 Score =  233 bits (595), Expect = 3e-58
 Identities = 100/177 (56%), Positives = 135/177 (76%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGEFR   S+L   GI F+H CP+IH QNG+ ERKH+HI DIGLTLLAQA++P  
Sbjct: 46   VQTDWGGEFRTFASYLTQFGIQFRHPCPHIHHQNGRIERKHRHIVDIGLTLLAQANLPLK 105

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FWW+AF TAV+LINRLP+  L   +P+  L++  P+Y  L+ FGC C+P+L+PYN+HKL 
Sbjct: 106  FWWNAFHTAVFLINRLPTPTLNNISPYQKLFQQVPDYVSLRVFGCACFPYLRPYNRHKLS 165

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPSGRIYISDTVHFNEIEFPYPALFDSKSTSSSTAP 2060
            F+S++CVF+GYS +HKGY+CLH SGR+Y+S+ V F+E  FPY +  D  S + S +P
Sbjct: 166  FRSNRCVFIGYSSSHKGYQCLHSSGRVYVSNHVIFDEQSFPYVSGSDFSSIAQSCSP 222


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  550 bits (1416), Expect = e-153
 Identities = 278/542 (51%), Positives = 368/542 (67%), Gaps = 8/542 (1%)
 Frame = -1

Query: 1840 VQNTHHMVTRSKHGIFKPKQV------FAVSVLP--QAPTRDSEALADPGWQEAMRAEFS 1685
            V + H M TRSK G  KPK +       + SV P  Q PT  S+AL +P W   M  E+ 
Sbjct: 454  VPSLHPMTTRSKVGTIKPKLLPDHITYLSTSVSPSDQLPTTVSQALKNPNWHTTMVEEYQ 513

Query: 1684 ALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETF 1505
            AL+ N TW+LVP+ P M VI +KWI++VK  +DG++ + KARLVA+GF+Q AG+++ +TF
Sbjct: 514  ALVRNNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTDTF 573

Query: 1504 SPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCK 1325
            SPV+K +TIR+VF+LA T NW I+Q+D NNAFLNG + + +Y++QP GF  +++P +VCK
Sbjct: 574  SPVIKASTIRVVFTLAITYNWEIRQIDFNNAFLNGEITETVYLSQPAGFVSTSHPQHVCK 633

Query: 1324 LEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTG 1145
            L+K+LYGLKQAPR W+  L+++L++ GF   TSD SLF    +              +TG
Sbjct: 634  LQKALYGLKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDLLITG 693

Query: 1144 DDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDC 965
            ++   V  +I  LQ  F LK LG V  FLG E   + +   L Q KY ++LL +T M   
Sbjct: 694  NNVPLVQTLIQDLQNRFALKDLGLVKDFLGFEALRTTTGLHLTQSKYTTDLLIKTKMHSA 753

Query: 964  KPCSTPMAINTKLSKFEGKLFSNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFE 785
            KP  TPM+   KL    G  FS+P LYRST+GALQYLT TRPDIA++VNKLSQ++Q P E
Sbjct: 754  KPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYLQQPTE 813

Query: 784  EHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNL 605
             HW +CKR+LRYLKG     LHFTP+SS  ++ ++DADWA  ID RRST G+CVF G+NL
Sbjct: 814  LHWTACKRVLRYLKGIVHRGLHFTPASSLHLQVYTDADWASSIDDRRSTTGYCVFLGTNL 873

Query: 604  VVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVAL 425
              WSS+KQ VV+RSS ++EYRALA+ + EV WL SL  ELGI + +   +WCDN  A AL
Sbjct: 874  FTWSSRKQPVVARSSTKAEYRALAHASXEVAWLRSLFSELGISLVNTPVIWCDNQGAGAL 933

Query: 424  SANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRSKL 245
            +ANPVFH+RTKHIEVDV + RE+V  K + V  V   EQ AD+FTKPL+  RF++L +KL
Sbjct: 934  AANPVFHSRTKHIEVDVXYVREQVLDKKLVVSYVPSVEQXADLFTKPLSIPRFQYLLTKL 993

Query: 244  CL 239
             L
Sbjct: 994  NL 995


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  541 bits (1393), Expect = e-151
 Identities = 271/509 (53%), Positives = 347/509 (68%), Gaps = 2/509 (0%)
 Frame = -1

Query: 1750 PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDK 1571
            P  D EAL D  W++AM  E++AL+ N TW LVPY     +I  KW+YK+K KADG+LD+
Sbjct: 937  PQNDKEALGDKNWRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDR 996

Query: 1570 LKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILE 1391
             KARLVA+GF+Q  GIDY +TFSPVVK  TIR++ S+A +R W ++QLD+ NAFL+G LE
Sbjct: 997  YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLE 1056

Query: 1390 DNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLF 1211
            + +YM QP GFE S+ PDYVCKL+K+LYGLKQAPRAWY  L K L  LGF+   +D SLF
Sbjct: 1057 EEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLF 1116

Query: 1210 FKASSTGXXXXXXXXXXXXVTGDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNS 1031
            F                  V    + A   ++  L +EF LK LG++ YFLGIEVT  ++
Sbjct: 1117 FLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSN 1176

Query: 1030 EFRLCQQKYISELLERTNMLDCKPCSTPMAINTKLSKFEGK-LFSNPRL-YRSTVGALQY 857
               L Q+KY ++LL+R NM +CKP STP++++ KL+ +EG  L  N  + YRS VGALQY
Sbjct: 1177 GVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQY 1236

Query: 856  LTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSD 677
            LTLTRPDIAYSVNK+ QF+ +P   HW + KR+LRYL    SL LH   S+S+ +  +SD
Sbjct: 1237 LTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSD 1296

Query: 676  ADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSL 497
            ADWAG ID R+STGG  VF GSNLV WS++KQ  VSRSS E+EY+A+AN TAE++W+ +L
Sbjct: 1297 ADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTL 1356

Query: 496  CLELGIPVSSPHQVWCDNSSAVALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSG 317
              ELGI      ++WCDN  A  LSANPVFHARTKHIEVD HF RE+V+ K + +  V  
Sbjct: 1357 LKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPS 1416

Query: 316  QEQVADIFTKPLTTERFEFLRSKLCLLEL 230
             +QVAD FTK L+    E  +  L L  L
Sbjct: 1417 GDQVADGFTKALSACLLENFKHNLNLARL 1445



 Score =  174 bits (442), Expect = 1e-40
 Identities = 85/167 (50%), Positives = 112/167 (67%), Gaps = 2/167 (1%)
 Frame = -1

Query: 2590 IQSDW-GGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPY 2414
            +Q+DW GG ++ L SF    G+        +  QNG AERKH+HI ++GL+LL+ ASMP 
Sbjct: 579  MQTDWRGGRYQKLNSFFAQIGLIIMCHVLTLIRQNGSAERKHRHIVEVGLSLLSYASMPL 638

Query: 2413 SFWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKL 2234
             FW +AF  A YLINR+PS  +Q  TP   L+   P+Y  L+ FGC C+P L+PYN HKL
Sbjct: 639  KFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKL 698

Query: 2233 QFKSSKCVFLGYSPNHKGYKCLH-PSGRIYISDTVHFNEIEFPYPAL 2096
            QF+S +CVFLG+S +HKG+KCL   SGR+YIS  V F+E  FP+  L
Sbjct: 699  QFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENVFPFSTL 745


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  540 bits (1390), Expect = e-150
 Identities = 283/550 (51%), Positives = 362/550 (65%), Gaps = 14/550 (2%)
 Frame = -1

Query: 1837 QNTHHMV----TRSKHGIFKPKQVFAVSV--------LPQAPTRDSEALADPGWQEAMRA 1694
            Q  HH++    TR + GI K K     +V        +   P    +AL D  W++AM A
Sbjct: 698  QQQHHVISRPATRLQSGIRKEKVYTDGTVKYRTTFLTVTGEPENLDDALKDNNWKKAMDA 757

Query: 1693 EFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYN 1514
            EF AL +NKTW LVP      VI  KW+YK+K K DGSLD+ KARLVA+GF+Q  GIDY 
Sbjct: 758  EFMALQNNKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYE 817

Query: 1513 ETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDY 1334
            +TFSPVVK  TIR++ S+A ++ WC++QLD+ NAFL+G+LE+ +YM QP G+EDS+ P Y
Sbjct: 818  DTFSPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGY 877

Query: 1333 VCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXX 1154
            VCKL+K+LYGLKQAPRAWY  L K LY +GF+   +D SLFF                  
Sbjct: 878  VCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDII 937

Query: 1153 VTGDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNM 974
            VT   ++AV  ++  LQ+EF LK LG++ YFLGIEVT  +    L Q KY+++LL R NM
Sbjct: 938  VTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNM 997

Query: 973  LDCKPCSTPMAINTKLSKFEGKLF--SNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFI 800
             DCKP STP++ + KLS  EG     ++   YRS VGALQYLTLTRPDIA+ VNK+ QF+
Sbjct: 998  FDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFL 1057

Query: 799  QSPFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVF 620
             +P   HWA+ KR+LRYLK    L L  + S S  + A+SDADWAG +D RRSTGG  VF
Sbjct: 1058 HAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVF 1117

Query: 619  FGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNS 440
             G NLV WS++KQ  VSRSS ESEY+ALAN TAE++W+ +L  EL +   S  ++WCDN 
Sbjct: 1118 LGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNL 1177

Query: 439  SAVALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEF 260
             A  LSANPVFHARTKHIEVD HF RE+V+ K + +  V   +QVAD FTK L+  + E 
Sbjct: 1178 GAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFTKALSVRQLEN 1237

Query: 259  LRSKLCLLEL 230
             +  L L +L
Sbjct: 1238 FKYNLNLGKL 1247



 Score =  202 bits (514), Expect = 6e-49
 Identities = 95/166 (57%), Positives = 119/166 (71%), Gaps = 1/166 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +QSDWGGE+  L SF    GI    SCP+ H QNG AERKH+HI ++GL LLA +SMP  
Sbjct: 378  MQSDWGGEYEKLNSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEMGLALLAYSSMPLK 437

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AF +AVYLINR PS +L++ TP   L+K  P+Y  L+ FGC C+P L+PYN  KLQ
Sbjct: 438  FWDEAFTSAVYLINRTPSRLLKYATPLERLFKQTPDYNLLRVFGCACWPHLRPYNARKLQ 497

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 2096
            F+S +C FLGYSP HKG+KCL PS GR+YIS  V F+E  FP+ +L
Sbjct: 498  FRSKQCTFLGYSPLHKGFKCLDPSTGRVYISHDVIFDENVFPFASL 543


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score =  538 bits (1386), Expect = e-150
 Identities = 278/545 (51%), Positives = 360/545 (66%), Gaps = 17/545 (3%)
 Frame = -1

Query: 1819 VTRSKHGIFKPKQV------FAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWS 1658
            VTRS+HG+ +PK+       +        P+   EAL+   W++AM  EFSALL NKTW 
Sbjct: 355  VTRSQHGVHRPKKYTDGTVRYGCLTETGEPSSLQEALSSANWKQAMDKEFSALLHNKTWH 414

Query: 1657 LVPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVKTTTI 1478
            LVP      +I +KW+YK+K KADG++D+ KARLVA+GF+Q  GIDY +TFSPVVK  TI
Sbjct: 415  LVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATI 474

Query: 1477 RLVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLK 1298
            RLV S+A ++ W ++QLD+ NAFL+G L++ +YM QP GFED+  P ++CKL+K+LYGLK
Sbjct: 475  RLVLSIAMSQGWSLRQLDVQNAFLHGYLDEEVYMRQPPGFEDARQPHFLCKLDKALYGLK 534

Query: 1297 QAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKDAVMGV 1118
            QAPRAWY  L K L  LGF    +D SLFF                  V      AV  +
Sbjct: 535  QAPRAWYSRLSKKLQELGFSSSKADTSLFFYNKGHHKMFVLVYVDDIIVASSSSPAVNAL 594

Query: 1117 ISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDCKPCSTPMAI 938
            +  L+++F LK LG++ YFLGIEV  +     L Q++Y +ELLER NM  CKP STP++ 
Sbjct: 595  LKDLEKDFALKDLGDLHYFLGIEVKRTPQTLLLSQERYTTELLERVNMTSCKPVSTPLST 654

Query: 937  NTKLSKFEGKLF--SNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHWASCK 764
              KLS   G     S+   YRS VGALQYLTLTRPDI+YSVNK+ QF+Q+P   HW++ K
Sbjct: 655  AEKLSVEIGDELGPSDVTQYRSIVGALQYLTLTRPDISYSVNKVCQFLQTPTTAHWSAVK 714

Query: 763  RLLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCID---------GRRSTGGHCVFFGS 611
            R+LRYLKGT  L L    SSS+ + AFSDADWAG +D          RRSTGG  VFFG 
Sbjct: 715  RILRYLKGTLDLGLKIVKSSSNLVSAFSDADWAGSVDDRRSTGGFADRRSTGGFAVFFGD 774

Query: 610  NLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAV 431
            NL+ WS++KQ  VSRSS E+EY+ALAN  AE++W+  L  ELGI   +  ++WCDN  A 
Sbjct: 775  NLISWSARKQATVSRSSTEAEYKALANAAAEIIWVRKLLTELGILHPNAARLWCDNLGAT 834

Query: 430  ALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRS 251
             ++ANPVFHARTKHIEVD HF RE+VA K +++  VS Q+QVAD FTKP++ ++    R 
Sbjct: 835  YMTANPVFHARTKHIEVDYHFVREQVAQKLLDIHFVSSQDQVADGFTKPISLQQLIGFRH 894

Query: 250  KLCLL 236
             L L+
Sbjct: 895  NLNLV 899



 Score =  199 bits (505), Expect = 7e-48
 Identities = 94/166 (56%), Positives = 119/166 (71%), Gaps = 1/166 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGE++ L SF Q  GI    SCP+ H QNG AERKH+HI ++GL+LLA ASMP  
Sbjct: 13   VQTDWGGEYQRLNSFFQRIGISHHVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLK 72

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AF TA YLINR P  ++ + TP Y L++  P+Y  L+ FGC C+P L+PYN HKL 
Sbjct: 73   FWDEAFLTATYLINRTPMKIIHYDTPAY-LFEEQPDYNALRTFGCACWPNLRPYNTHKLA 131

Query: 2230 FKSSKCVFLGYSPNHKGYKCLH-PSGRIYISDTVHFNEIEFPYPAL 2096
            F+S +CVFLGYSP HKG+KCL   SGR+YIS  V F+E  FP+  L
Sbjct: 132  FRSKQCVFLGYSPLHKGFKCLEVNSGRVYISRDVVFDENIFPFAQL 177


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  538 bits (1386), Expect = e-150
 Identities = 272/535 (50%), Positives = 356/535 (66%)
 Frame = -1

Query: 1849 ATPVQNTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDN 1670
            A    NTH M+TR+K GI KPK +F  ++  + P+  S AL    W++AM AE+ AL  N
Sbjct: 907  AKDADNTHPMITRAKSGIVKPK-IFIAAI--REPSSVSAALQQDEWKKAMVAEYDALQRN 963

Query: 1669 KTWSLVPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVK 1490
             TWSLVP     + I  KW+YK K   DG++ K KARLVA+GF Q AG D+ ETFSPVVK
Sbjct: 964  NTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVK 1023

Query: 1489 TTTIRLVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCKLEKSL 1310
             +T+R+VF++A +RNW I+QLD+NNAFLNG L++ ++M QP GF D   P+ VC+L K+L
Sbjct: 1024 PSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKAL 1083

Query: 1309 YGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKDA 1130
            YGLKQAPRAW++ L ++L S GF    SD SLF + +               V G D  A
Sbjct: 1084 YGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAA 1143

Query: 1129 VMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDCKPCST 950
            +  +I+ L  EF LK LG V YFLGI+V+ +N+   L Q KYI +LL++T M+ CKP  T
Sbjct: 1144 ITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPART 1203

Query: 949  PMAINTKLSKFEGKLFSNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHWAS 770
            P+    KL   +G    +   YRSTVGALQY+T+TRP++++SVNK+ QF+Q+P EEHW  
Sbjct: 1204 PLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKV 1263

Query: 769  CKRLLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNLVVWSS 590
             KR+LRYL+GT    LH   SS+  +  F DADWA  +D RRST GHCVF G NL+ W S
Sbjct: 1264 VKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISWQS 1323

Query: 589  KKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVALSANPV 410
            KKQ +VSRSS E EYR+LA + AE+ WL SL  EL +P++ P  VWCDN S V LSANPV
Sbjct: 1324 KKQHIVSRSSIEIEYRSLAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPV 1383

Query: 409  FHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRSKL 245
             HARTKHIE+D++F REKV  K + V  V   +Q+AD+ TK +++ +F   R KL
Sbjct: 1384 LHARTKHIELDLYFVREKVIRKEVEVRHVPSADQLADVLTKTVSSTQFIEFRHKL 1438



 Score =  202 bits (514), Expect = 6e-49
 Identities = 94/180 (52%), Positives = 122/180 (67%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGEFR   S+L + GI  + SCP+   QNG AERKH+ I + GLTLL  AS+P  
Sbjct: 646  LQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLK 705

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW ++F+T VYL NRLP+A+L  + P  +L+K+ P+Y  LK FGC+C+P L+PYN HKLQ
Sbjct: 706  FWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQ 765

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPSGRIYISDTVHFNEIEFPYPALFDSKSTSSSTAPEVT 2051
            ++S +C FLGYS  HKGYKC+  +GR+YIS  V FNE  FPY       S   ST    T
Sbjct: 766  YRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLSTVSPST 825


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  537 bits (1384), Expect = e-150
 Identities = 275/548 (50%), Positives = 355/548 (64%), Gaps = 8/548 (1%)
 Frame = -1

Query: 1849 ATPVQNTHHMVTRSKHGIFKPKQV------FAVSVLPQAPTRDSEALADPGWQEAMRAEF 1688
            A P    H   TR + GI K K        +        P  D EAL D  W+ AM AE+
Sbjct: 892  AAPAPRPH---TRLRSGIRKEKVYTDGTVKYGCFTSTGEPQNDKEALGDKNWKAAMEAEY 948

Query: 1687 SALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNET 1508
             AL+ N TW LVPY     VI  KW+YK+K KADG+LD+ KARLVA+GF+Q  GIDY +T
Sbjct: 949  DALIKNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDT 1008

Query: 1507 FSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVC 1328
            FSPVVK  TIR++ S+A +R W ++QLD+ NAFL+G LE+ +YM QP GFE  + P+YVC
Sbjct: 1009 FSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVC 1068

Query: 1327 KLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVT 1148
            KL+K+LYGLKQAPRAWY  L K L  LGF+   +D SLFF                  + 
Sbjct: 1069 KLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIA 1128

Query: 1147 GDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLD 968
               + A   ++  L +EF LK LG++ YFLGIEVT   +   L Q+KY ++LL+R NM +
Sbjct: 1129 SSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSN 1188

Query: 967  CKPCSTPMAINTKLSKFEGKLF--SNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQS 794
            CKP STP++++ KL+ +EG     ++   YRS VGALQYLTLTRPDIAYSVNK+ QF+ +
Sbjct: 1189 CKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHA 1248

Query: 793  PFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFG 614
            P  +HW + KR+LRYL    SL L+   S+S+ +  +SDADWAG +D R+STGG  VF G
Sbjct: 1249 PTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLG 1308

Query: 613  SNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSA 434
            SNLV WS++KQ  VSRSS E+EY+A+AN TAE++W+ +L  ELGI      ++WCDN  A
Sbjct: 1309 SNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGA 1368

Query: 433  VALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLR 254
              LSANPVFHARTKHIEVD HF RE+V+ K + +  V   +QVAD FTK L+    E  +
Sbjct: 1369 KYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSVRLLEHFK 1428

Query: 253  SKLCLLEL 230
              L L  L
Sbjct: 1429 HNLNLTRL 1436



 Score =  194 bits (494), Expect = 1e-46
 Identities = 91/166 (54%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGE++ L SF    GI    SCP+ H QNG AERKH+HI ++GL+LL+ ASMP  
Sbjct: 580  MQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLK 639

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AF  A YLINR+PS  +Q  TP   L+   P+Y  L+ FGC C+P L+PYN HKLQ
Sbjct: 640  FWDEAFVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQ 699

Query: 2230 FKSSKCVFLGYSPNHKGYKCLH-PSGRIYISDTVHFNEIEFPYPAL 2096
            F+S +CVFLG+S +HKG+KCL   SGR+YIS  V F+E  FP+  L
Sbjct: 700  FRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENIFPFSTL 745


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  535 bits (1378), Expect = e-149
 Identities = 269/501 (53%), Positives = 344/501 (68%), Gaps = 2/501 (0%)
 Frame = -1

Query: 1735 EALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDKLKARL 1556
            EAL D  W+EAM +E+ AL+ NKTW LVP      +I  KW+YKVK KADGSLD+ KAR+
Sbjct: 929  EALGDKNWKEAMDSEYQALMKNKTWHLVPSKKGQNIIDCKWVYKVKRKADGSLDRYKARV 988

Query: 1555 VARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILEDNIYM 1376
            VA+GF+Q  GIDY +TF+PVVK  TIR + S+A +R W ++QLD+ NAFL+G+LE++++M
Sbjct: 989  VAKGFKQRYGIDYEDTFNPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFM 1048

Query: 1375 AQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASS 1196
             QP G+E      YVCKL+K+LYGLKQAPRAWY  L   L+ LGFK   SD SLFF +  
Sbjct: 1049 RQPPGYEQKD--GYVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKG 1106

Query: 1195 TGXXXXXXXXXXXXVTGDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLC 1016
                          V     DA   ++  L QEF LK LG + YFLGIEV   N+   L 
Sbjct: 1107 DVAMFMLVYVDDIIVASSSIDATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNNGIVLT 1166

Query: 1015 QQKYISELLERTNMLDCKPCSTPMAINTKLSKFEGKLFS--NPRLYRSTVGALQYLTLTR 842
            Q+KY  ++L+R NM DCK  +TP++I+ KLS  EG  F   +   YRS VGALQYLTLTR
Sbjct: 1167 QEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTR 1226

Query: 841  PDIAYSVNKLSQFIQSPFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSDADWAG 662
            PD+++SVNK+ Q++ +P  +HWA+ KR+LRYLK T  L L  + S+S  + AFSDADWAG
Sbjct: 1227 PDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAG 1286

Query: 661  CIDGRRSTGGHCVFFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELG 482
            C+D R STGG  VF G NLV WS++KQ  VSRSS E+EY+ALANVTAE++W+ +L  ELG
Sbjct: 1287 CLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELG 1346

Query: 481  IPVSSPHQVWCDNSSAVALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVA 302
            I      +VWCDN  A  ++ANPVFHARTKHIEVD HF RE+VA KF+ V  +S ++QVA
Sbjct: 1347 IQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKFLQVEYISTKDQVA 1406

Query: 301  DIFTKPLTTERFEFLRSKLCL 239
            D FTK L+  + E  R+ L L
Sbjct: 1407 DGFTKTLSVRQLEMFRNNLNL 1427



 Score =  200 bits (509), Expect = 2e-48
 Identities = 93/166 (56%), Positives = 119/166 (71%), Gaps = 1/166 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGE+  L +F  + GI    SCP+ H QNG  ERKH+HI ++GL+LLA ASMP  
Sbjct: 567  MQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASMPLK 626

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AF  A YLINRLPS V++F TP   L+K  P+YK L+ FGC C+P L+PYN HKLQ
Sbjct: 627  FWDEAFLAATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWPNLRPYNTHKLQ 686

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 2096
            F+S +CVFLG+S  HKG+KCL  S GR+Y+S  V F+E  FP+  L
Sbjct: 687  FRSKQCVFLGFSNIHKGFKCLDVSTGRVYVSRDVTFDEQVFPFANL 732


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  534 bits (1375), Expect = e-149
 Identities = 268/507 (52%), Positives = 341/507 (67%), Gaps = 2/507 (0%)
 Frame = -1

Query: 1750 PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDK 1571
            PT D EAL D  W+ AM +E+ AL+ NKTW LVP      +I  KW+YK+K KADG+LD+
Sbjct: 945  PTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDR 1004

Query: 1570 LKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILE 1391
             KARLVA+GF+Q  GIDY +TFSPVVK  TIR++ SLA ++ W ++QLD+ NAFL+G LE
Sbjct: 1005 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLE 1064

Query: 1390 DNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLF 1211
            + +YM QP GFED T P +VCKL+K+LYGLKQAPRAW+  L K L  LGFK    D SLF
Sbjct: 1065 EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLF 1124

Query: 1210 FKASSTGXXXXXXXXXXXXVTGDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNS 1031
            F                  V    + A   ++  L+ EF LK LG + YFLGIEV+   +
Sbjct: 1125 FLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQN 1184

Query: 1030 EFRLCQQKYISELLERTNMLDCKPCSTPMAINTKLSKFEGKLFS--NPRLYRSTVGALQY 857
               L Q KY ++LL++  M+DCKP +TP++++ KLS  EG L    +   YRS VGALQY
Sbjct: 1185 GIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQY 1244

Query: 856  LTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSD 677
            LTLTRPDIA+SVNK+ QF+ +P   HW + KR+LRYLK    L L    S S+ +  FSD
Sbjct: 1245 LTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSD 1304

Query: 676  ADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSL 497
            ADWAGC+D RRSTGG  +F GSNLV W+++KQ  VSRSS ESEY+A+AN TAE++W+ +L
Sbjct: 1305 ADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTL 1364

Query: 496  CLELGIPVSSPHQVWCDNSSAVALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSG 317
              EL I      ++WCDN  A  LSANPVFHARTKHIEVD HF RE+V+ K + +  VS 
Sbjct: 1365 LAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVST 1424

Query: 316  QEQVADIFTKPLTTERFEFLRSKLCLL 236
             +QVAD FTKPL+    E  +S L L+
Sbjct: 1425 NDQVADGFTKPLSVRLLENFKSNLNLV 1451



 Score =  197 bits (500), Expect = 3e-47
 Identities = 99/189 (52%), Positives = 126/189 (66%), Gaps = 6/189 (3%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGE++ L SF    GI    SCP+ H QNG AERKH+HI +IGL+LL+ ASMP  
Sbjct: 574  MQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLK 633

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AFQ A YLINR+PS V+   +P   L+K  P+Y  L+ FGC C+P L+PYN HKLQ
Sbjct: 634  FWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQ 693

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPALFDS-----KSTSSS 2069
            F+S +CVFLG+S  HKG+KCL  S GRIYIS  V F+E  FP+  L  +     +S    
Sbjct: 694  FRSKRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPFTELHANAGARLRSEIDI 753

Query: 2068 TAPEVTVPI 2042
              PE+  PI
Sbjct: 754  LTPELLGPI 762


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  533 bits (1374), Expect = e-148
 Identities = 274/533 (51%), Positives = 357/533 (66%)
 Frame = -1

Query: 1834 NTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWSL 1655
            N H MVTR+K+GI K K  F+  +    PT  ++A+ D  W  AM  EFSAL  N TW L
Sbjct: 686  NQHPMVTRAKNGISKKKVYFSSHI--SEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHL 743

Query: 1654 VPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVKTTTIR 1475
            VP   +  +I  KW+YK+K K DG++D+ KARLVA+GF Q  G++Y ETFSPVVK +TIR
Sbjct: 744  VPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFETFSPVVKASTIR 803

Query: 1474 LVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQ 1295
            ++ ++A + NW + QLD+ NAFL+G LE++++M QP GF +S YP +VCKL K+LYGLKQ
Sbjct: 804  IILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQQPPGFINSQYPSHVCKLNKALYGLKQ 863

Query: 1294 APRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKDAVMGVI 1115
            APRAWY+ L  SL   GF+   +D S+F   S+              VTG     V   I
Sbjct: 864  APRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDILVTGSSSAQVSSFI 923

Query: 1114 SMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDCKPCSTPMAIN 935
            + L   F L+ LG V+YFLGIEV  S + F L Q KY  +LL RT MLD KP +TP  + 
Sbjct: 924  TRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLG 983

Query: 934  TKLSKFEGKLFSNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLL 755
              LS  +G+ FS+  LYRSTVGALQYLTLTRPDI+++VNK  QF+ +P   HW + KR+L
Sbjct: 984  QTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRIL 1043

Query: 754  RYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDV 575
            RYLKGT S  +    S+S  I  ++DADWA C D RRSTGG+ +F G NLV WSS KQ V
Sbjct: 1044 RYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKV 1103

Query: 574  VSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVALSANPVFHART 395
            VSRSSAESEYRALA+ T+E++W+  +  EL +  SSP  +WCDN SA  L+ANPVFHART
Sbjct: 1104 VSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHART 1163

Query: 394  KHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRSKLCLL 236
            KHIE+D+HF R+ V  K + +  +   EQVADIFTK +++ +F   R+KL ++
Sbjct: 1164 KHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQFLSFRTKLSVV 1216



 Score =  187 bits (475), Expect = 2e-44
 Identities = 88/170 (51%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
 Frame = -1

Query: 2551 SFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLI 2372
            S+L   GI  Q SCPY   QNG+AERK +HI + GL LLA AS+P+ FW  AF T ++LI
Sbjct: 465  SYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTTIFLI 524

Query: 2371 NRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSP 2192
            NRLP+ VL +Q+PF +L+   PNY   K FGC CYP+++PYN++KL ++SS+CVFLGYS 
Sbjct: 525  NRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSS 584

Query: 2191 NHKGYKCLHP-SGRIYISDTVHFNEIEFPYPALFDSKSTSSSTAPEVTVP 2045
            NHKGY CL+P +GR+Y++  V F+E  FP+      +ST   ++  VT+P
Sbjct: 585  NHKGYMCLNPLTGRLYVTRHVVFHETVFPF------QSTPDQSSSVVTIP 628


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  531 bits (1367), Expect = e-148
 Identities = 276/537 (51%), Positives = 352/537 (65%), Gaps = 8/537 (1%)
 Frame = -1

Query: 1816 TRSKHGIFKPKQV------FAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWSL 1655
            TR + G+ KPK        +        P   +EAL D  W++AM  E+SAL+ NKTW L
Sbjct: 777  TRLQQGVRKPKVYTDGTIRYGCFTSSGEPYDLNEALGDVNWKDAMDIEYSALMKNKTWHL 836

Query: 1654 VPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVKTTTIR 1475
            VP      VI  KW+YK+K KADGSLD+ KARLVA+G++Q  GIDY++TFSPVVK  TIR
Sbjct: 837  VPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIR 896

Query: 1474 LVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQ 1295
            ++ S+A +R W + QLD+ NAFL+G+LE+ +YM QP G+EDST  +YVCKL+K+LYGLKQ
Sbjct: 897  IILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQ 956

Query: 1294 APRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKDAVMGVI 1115
            APRAWY  L   L SLGF+   +D SLFF    +             V      A   ++
Sbjct: 957  APRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALL 1016

Query: 1114 SMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDCKPCSTPMAIN 935
            S L +EF LK LG+++YFLGIEV        L Q KY S+LL++  M DCKP STP++ +
Sbjct: 1017 SDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTS 1076

Query: 934  TKLSKFEGKLFSNPRL--YRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHWASCKR 761
             KLS  EG       +  YRS VGALQYLTLTRPDIA+SVNK+ QF+ +P   HWA+ KR
Sbjct: 1077 EKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKR 1136

Query: 760  LLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQ 581
            +LRY+K   +L LH   S S+ + AFSDADWAG +D R+STGG  VF GSNLV WS++KQ
Sbjct: 1137 ILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQ 1196

Query: 580  DVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVALSANPVFHA 401
              VSRSS ESEY+ALAN TAE++W+  L  E+ I      ++WCDN  A  LSANP+FHA
Sbjct: 1197 PTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHA 1256

Query: 400  RTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRSKLCLLEL 230
            RTKHIEVD HF R++VA K +++  V   +QVAD FTKPL+    E  +  L L  L
Sbjct: 1257 RTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLSVRLLENFKVNLNLTRL 1313



 Score =  196 bits (497), Expect = 6e-47
 Identities = 91/166 (54%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGE++ L +F    GI    SCP+ H QNG AERKH+HI ++GL+LLA ASMP  
Sbjct: 427  VQTDWGGEYQRLNTFFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLK 486

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AF  A YLINR P+ +L   TPF  L+   P+Y  L+ FGC C+P L+PYN HKLQ
Sbjct: 487  FWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQ 546

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 2096
            F+S +CVFLGYS  HKG+KCL  S GR+Y+S  V F+E  FP+ +L
Sbjct: 547  FRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDVTFDENFFPFASL 592


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  530 bits (1365), Expect = e-147
 Identities = 277/530 (52%), Positives = 358/530 (67%)
 Frame = -1

Query: 1834 NTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWSL 1655
            NTH MVTR+K GI K K+ F V    + P   S+A  +  W +AM +E+ ALL N TWSL
Sbjct: 833  NTHPMVTRAKSGIHK-KRSFIVQHTTE-PRTYSQASKNDSWVQAMNSEYQALLRNNTWSL 890

Query: 1654 VPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVKTTTIR 1475
            VP      ++  +WIYK+K + DGS+D+ KARLVA+GF Q  GIDY +TFSPVVK  TIR
Sbjct: 891  VPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIR 950

Query: 1474 LVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQ 1295
            L+ +LA +  W ++QLD+ NAFLNG LE+ ++M QP GF + TYP YVCKL K+LYGLKQ
Sbjct: 951  LILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQ 1010

Query: 1294 APRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKDAVMGVI 1115
            APRAW+  L+ +L   GF+   +D SLF   ++T             VTG +   V   I
Sbjct: 1011 APRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVSHFI 1070

Query: 1114 SMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDCKPCSTPMAIN 935
            S L+ +F L+ LG +SYFLGI+     S   L Q KYI++LL RT M   KP  TP  + 
Sbjct: 1071 SYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLG 1130

Query: 934  TKLSKFEGKLFSNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLL 755
              LS+ +G   S+P  YR TVGALQY+TLTRPDIA++VNK  QF+  P + HW + KR+L
Sbjct: 1131 RTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRIL 1190

Query: 754  RYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDV 575
            RYLKGT  L LHF P++S  ++ +SDADWA C D RRST G+CVF GSNL+ WSS KQ +
Sbjct: 1191 RYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRL 1250

Query: 574  VSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVALSANPVFHART 395
            VS+SSAESEYR L ++TAE+VW+ SL  EL +P +SP  +WCDN SA  L+ANPVFH+R+
Sbjct: 1251 VSKSSAESEYRGLVSLTAELVWIQSLLQELCLP-TSPPILWCDNQSAAHLAANPVFHSRS 1309

Query: 394  KHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRSKL 245
            KHIE+D+HF REKV  + + +  V   +Q+ADIFTK L   +F  LRSKL
Sbjct: 1310 KHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKL 1359



 Score =  191 bits (485), Expect = 1e-45
 Identities = 99/202 (49%), Positives = 128/202 (63%), Gaps = 18/202 (8%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            IQSD GGEF     +L+  GI  Q SCP+   QNG+AERK +H+ + GL L+AQ+ +P  
Sbjct: 603  IQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLALMAQSFLPSK 662

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            +W  AFQTAVYLIN LP+ +L FQ+P   L+   PNY  L+ FGC C+P L+PY QHKL 
Sbjct: 663  YWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLC 722

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPY----------------- 2105
            ++S+ CVFLGY+P HKGY CL  S  RIYIS  V F+E  FP+                 
Sbjct: 723  YRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSPPSSPSPHLPSST 782

Query: 2104 PALFDSKSTSSSTAPEVTVPII 2039
            PAL +S S S+ ++P V+ PII
Sbjct: 783  PALINSPSLSAPSSPAVSSPII 804


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  530 bits (1365), Expect = e-147
 Identities = 268/506 (52%), Positives = 337/506 (66%), Gaps = 2/506 (0%)
 Frame = -1

Query: 1750 PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDK 1571
            P   ++AL +  W++AM  E+ AL++NKTW LVP      VI  KW+YK+K K DGSLD+
Sbjct: 939  PKNLTDALQNTNWKKAMDIEYEALMNNKTWHLVPPKQGRNVIDCKWVYKIKRKQDGSLDR 998

Query: 1570 LKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILE 1391
             KARLVA+GF+Q  GIDY +TFSPVVK  TIR+V S+A +R WC++QLD+ NAFL+G LE
Sbjct: 999  YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSIAVSRGWCMRQLDVQNAFLHGFLE 1058

Query: 1390 DNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLF 1211
            + +YM QP G+ED ++P YVCKL+K+LYGLKQAPRAWY  L K LY LGF+    D SLF
Sbjct: 1059 EEVYMKQPPGYEDESFPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTSLF 1118

Query: 1210 FKASSTGXXXXXXXXXXXXVTGDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNS 1031
            F                  VT   ++AV  ++  L++EF LK LG++ YFLGIEV     
Sbjct: 1119 FYNKGGLIIFVLIYVDDIIVTSSRQEAVSALLQDLKKEFALKDLGDLHYFLGIEVNKVTD 1178

Query: 1030 EFRLCQQKYISELLERTNMLDCKPCSTPMAINTKLSKFEGKLFS--NPRLYRSTVGALQY 857
            E  L Q KY  +LL R NM DCKP STP++ + KLS  EG L    +   YRS VGALQY
Sbjct: 1179 EIILTQDKYACDLLRRVNMFDCKPVSTPLSTSEKLSAHEGDLLGPLDATNYRSVVGALQY 1238

Query: 856  LTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSD 677
            LTLTRPDIA+ VNK+ QF+ +P   HWA+ KR+LRYLK    L L    S S  + A+SD
Sbjct: 1239 LTLTRPDIAFPVNKVCQFLHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVSAYSD 1298

Query: 676  ADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSL 497
            ADWAG +D RRSTGG  VF G NLV W ++KQ  VSRSS ESEY+ALAN TAE++W+ +L
Sbjct: 1299 ADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVSRSSTESEYKALANATAEIMWVQTL 1358

Query: 496  CLELGIPVSSPHQVWCDNSSAVALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSG 317
              EL +      ++WCDN  A  LS+NPVFHARTKHIEVD HF RE+V+ K + +  V  
Sbjct: 1359 LTELQVQSPPMAKLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPT 1418

Query: 316  QEQVADIFTKPLTTERFEFLRSKLCL 239
             +QVAD FTK L   + E  +  L L
Sbjct: 1419 GDQVADGFTKALPVRQLENFKHNLNL 1444



 Score =  207 bits (526), Expect = 3e-50
 Identities = 97/166 (58%), Positives = 118/166 (71%), Gaps = 1/166 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +QSDWGGE+  L SF    GI    SCP+ H QNG AERKH+HI ++GLTLLA +SMP  
Sbjct: 580  MQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLK 639

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AFQ AVYLINR P+ +LQF TP   L+   P+Y  L+ FGC C+P L+PYN HKLQ
Sbjct: 640  FWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQ 699

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 2096
            F+S +C FLGYS  HKG+KCL PS GR+YIS  V F+E  FP+  L
Sbjct: 700  FRSKQCTFLGYSTLHKGFKCLDPSTGRVYISRDVIFDETNFPFAKL 745


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  528 bits (1361), Expect = e-147
 Identities = 272/530 (51%), Positives = 355/530 (66%), Gaps = 9/530 (1%)
 Frame = -1

Query: 1816 TRSKHGIFKPKQVFAVSVLP-------QAPTRDSEALADPGWQEAMRAEFSALLDNKTWS 1658
            TR +HGI KPKQ    +V           P+  SEALADP W+ AM AEF AL  N TW+
Sbjct: 896  TRLQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWT 955

Query: 1657 LVPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVKTTTI 1478
            LVP      +I  KW++KVK  ADGS+D+LKARLVA+GF+Q  GIDY++TFSPVVK +TI
Sbjct: 956  LVPPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAKGFKQQYGIDYDDTFSPVVKHSTI 1015

Query: 1477 RLVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLK 1298
            RLV SLA ++ W ++QLD+ NAFL+GILE+ +YM QP GF D+T+P+Y C L+KSLYGLK
Sbjct: 1016 RLVLSLAVSQKWSLRQLDVQNAFLHGILEETVYMKQPPGFADTTHPNYHCHLQKSLYGLK 1075

Query: 1297 QAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKDAVMGV 1118
            Q PRAWY  L + L SLGF    +D SLF   + +             +TG    A+  V
Sbjct: 1076 QRPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNV 1135

Query: 1117 ISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDCKPCSTPMAI 938
            ++ L+ +F +K LG++ YFLGIEV        LCQ+KY  +LL+R  M  CKP  TP+A 
Sbjct: 1136 LAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRVGMECCKPVHTPVAT 1195

Query: 937  NTKLSKFEGKLFSNPRL--YRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHWASCK 764
            + KLS   G L S      YRS VGALQYLTLTRPD++Y++N++ QF+ +P + HW + K
Sbjct: 1196 SEKLSASAGTLLSPEETTKYRSVVGALQYLTLTRPDLSYAINRVCQFLHAPTDLHWTAVK 1255

Query: 763  RLLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNLVVWSSKK 584
            R+LR ++ T  L L   PS S  + AFSDADWAGC D R+STGG+ +F G NL+ W+SKK
Sbjct: 1256 RILRNIQHTIGLGLTIRPSLSLMLSAFSDADWAGCPDDRKSTGGYALFLGPNLISWNSKK 1315

Query: 583  QDVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVALSANPVFH 404
            Q  VSRSS E+EY+A+AN TAEV+WL SL  ELGI ++   ++WCDN  A  LS+ P+F+
Sbjct: 1316 QSTVSRSSTEAEYKAMANATAEVIWLQSLLHELGIRLTGIPRLWCDNLGATYLSSKPIFN 1375

Query: 403  ARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLR 254
            ARTKHIEVD HF R++V +K +++  +S  +QVAD FTK LT  R    R
Sbjct: 1376 ARTKHIEVDFHFVRDRVLSKKLDIRLISTNDQVADGFTKALTIGRLNEFR 1425



 Score =  199 bits (505), Expect = 7e-48
 Identities = 95/165 (57%), Positives = 117/165 (70%), Gaps = 1/165 (0%)
 Frame = -1

Query: 2587 QSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSF 2408
            QSDWGGE+  L +  +  GIH Q SCP+ H QNG AERKH+HI ++GL LLAQ+SMP  +
Sbjct: 581  QSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKY 640

Query: 2407 WWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQF 2228
            W  AF  AVYLINR PS  +   TP + L    P+Y  L+ FGC C+P L+PYNQHKLQF
Sbjct: 641  WDHAFLAAVYLINRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQF 700

Query: 2227 KSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 2096
            +S++CVFLGYS  HKG+KCL  S GRIYIS  V F+E  FP+ +L
Sbjct: 701  RSTRCVFLGYSNMHKGFKCLDISTGRIYISRDVVFDEHVFPFASL 745


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  528 bits (1361), Expect = e-147
 Identities = 276/530 (52%), Positives = 356/530 (67%)
 Frame = -1

Query: 1834 NTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWSL 1655
            NTH MVTR+K GI K K+ F V    + P   S+A  +  W +AM +E+ ALL N TWSL
Sbjct: 180  NTHPMVTRAKSGIHK-KRSFIVQHTTE-PRTYSQAFKNDSWVQAMNSEYQALLRNNTWSL 237

Query: 1654 VPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVKTTTIR 1475
            VP      ++  +WIYK+K + DGS+D+ KARLVA+GF Q  GIDY +TFSPVVK  TIR
Sbjct: 238  VPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIR 297

Query: 1474 LVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQ 1295
            L+ +LA +  W ++QLD+ N FLNG LE+ ++M QP GF + TYP YVCKL K+LYGLKQ
Sbjct: 298  LILALAVSFQWSVRQLDVENGFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQ 357

Query: 1294 APRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKDAVMGVI 1115
            APRAW+  L+ +L   GF+   +D SLF   ++T             VTG +   V   I
Sbjct: 358  APRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPTLVSHFI 417

Query: 1114 SMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLDCKPCSTPMAIN 935
            S L+ +F L+ LG +SYFLGI+     S   L Q KYI++LL RT M   KP  TP  + 
Sbjct: 418  SYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLG 477

Query: 934  TKLSKFEGKLFSNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLL 755
              LS+ +G   S+P  YR TVGALQY+TLTRPDIA++VNK  QF+  P + HW + KR+L
Sbjct: 478  RTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRIL 537

Query: 754  RYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDV 575
            RYLKGT  L LHF P++S   + +SDADWA C D RRST G+CVF GSNL+ WSS KQ +
Sbjct: 538  RYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRL 597

Query: 574  VSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVALSANPVFHART 395
            VS+SSAESEYR L ++TAE+VW+ SL  EL +P +SP  +WCDN SA  L+ANPVFH+R+
Sbjct: 598  VSKSSAESEYRGLVSLTAELVWIQSLLQELCLP-TSPPILWCDNQSAAHLAANPVFHSRS 656

Query: 394  KHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRSKL 245
            KHIE+D+HF REKV  + + +  V   +Q+ADIFTK L   +F  LRSKL
Sbjct: 657  KHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQFCNLRSKL 706



 Score =  142 bits (358), Expect = 8e-31
 Identities = 73/151 (48%), Positives = 95/151 (62%), Gaps = 18/151 (11%)
 Frame = -1

Query: 2437 LAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFL 2258
            +AQ+ +P  +W  AFQTAVYLIN LP+ +L FQ+P   L+   PNY  L+ FGC C+P L
Sbjct: 1    MAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSL 60

Query: 2257 KPYNQHKLQFKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPY-------- 2105
            +PY QHKL ++S+ CVFLGY+P HKGY CL  S  RIYIS  V F+E  FP+        
Sbjct: 61   RPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSPPSS 120

Query: 2104 ---------PALFDSKSTSSSTAPEVTVPII 2039
                     PAL +S S S+ ++P V+ PII
Sbjct: 121  PSPHLPSSTPALINSPSLSAPSSPAVSSPII 151


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  527 bits (1357), Expect = e-146
 Identities = 262/509 (51%), Positives = 341/509 (66%), Gaps = 2/509 (0%)
 Frame = -1

Query: 1750 PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDK 1571
            P  D EAL D  W++AM  E++AL+ N TW LVPY     +I  KW+YKVK KADG+LD+
Sbjct: 940  PQNDKEALGDKNWRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWVYKVKRKADGTLDR 999

Query: 1570 LKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILE 1391
             K RL+A+GF+Q  GIDY +TFSPVVK  TIR++ S+A +R W ++QLD+ N FL+G LE
Sbjct: 1000 YKTRLIAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNDFLHGFLE 1059

Query: 1390 DNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLF 1211
            + +YM QP GFE S+ PDYVCKL K+LYGLKQAPRAWY  L K L  LGF+   +D SLF
Sbjct: 1060 EEVYMQQPPGFESSSKPDYVCKLNKALYGLKQAPRAWYSRLSKKLTELGFEASKADTSLF 1119

Query: 1210 FKASSTGXXXXXXXXXXXXVTGDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNS 1031
            F                  V    + A   ++  L +EF LK LG++ YFLGIEVT  ++
Sbjct: 1120 FLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKEFTLKDLGDLHYFLGIEVTKVSN 1179

Query: 1030 EFRLCQQKYISELLERTNMLDCKPCSTPMAINTKLSKFEGKLF--SNPRLYRSTVGALQY 857
               L Q+KY +++L+R NM +CKP STP++++ KL+ +EG     ++   YRS VGALQY
Sbjct: 1180 GVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQY 1239

Query: 856  LTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSD 677
            LTLTRPDIAYSVNK+ QF+ +P   HW + KR+LRYL    SL LH   S+S+ +  +SD
Sbjct: 1240 LTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHVHKSASTLVHGYSD 1299

Query: 676  ADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSL 497
            AD AG ID R+STGG  VF GSNLV WS++KQ  VSRSS E+EY+A+AN TAE++W+ ++
Sbjct: 1300 ADGAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTV 1359

Query: 496  CLELGIPVSSPHQVWCDNSSAVALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSG 317
              ELGI      ++WCDN  A  LSANPVFHA+TKHI VD HF RE+V+ K + +  V  
Sbjct: 1360 LKELGIESPKAAKIWCDNLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEIDFVPS 1419

Query: 316  QEQVADIFTKPLTTERFEFLRSKLCLLEL 230
             +QVAD FTK L+    E  +  L L  L
Sbjct: 1420 GDQVADGFTKALSARLLENFKHNLNLTRL 1448



 Score =  191 bits (484), Expect = 2e-45
 Identities = 90/166 (54%), Positives = 115/166 (69%), Gaps = 1/166 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGE++ L SF    GI    SCP+ H QNG AERKH+HI ++GL+LL+ ASMP  
Sbjct: 583  MQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLK 642

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AF  A YLINR+PS  +Q  TP   L+   P+Y  L+ F CTC+P L PYN HKLQ
Sbjct: 643  FWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQ 702

Query: 2230 FKSSKCVFLGYSPNHKGYKCLH-PSGRIYISDTVHFNEIEFPYPAL 2096
            F+S +CVFLG+S +HKG+K L   SGR+YIS  V F+E  FP+  L
Sbjct: 703  FRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFDENVFPFSTL 748


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  526 bits (1356), Expect = e-146
 Identities = 267/506 (52%), Positives = 342/506 (67%), Gaps = 2/506 (0%)
 Frame = -1

Query: 1750 PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDK 1571
            P    +AL +  W+ AM AE+ AL+ N TW LVP      VI  KW+YK+K K DGSLD+
Sbjct: 923  PENLQDALQNNNWKCAMDAEYMALIKNNTWHLVPPQQGRNVIDCKWVYKIKRKQDGSLDR 982

Query: 1570 LKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILE 1391
             KARLVA+GF+Q  GIDY +TFSPVVK  TIR++ S+A +R WC++QLD+ NAFL+G+LE
Sbjct: 983  YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQLDVQNAFLHGVLE 1042

Query: 1390 DNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLF 1211
            + +YM QP G+E+ + PDYVCKL+K+LYGLKQAPRAWY  L   L+ LGFK   +D SLF
Sbjct: 1043 EEVYMKQPPGYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDLGFKGSKADTSLF 1102

Query: 1210 FKASSTGXXXXXXXXXXXXVTGDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNS 1031
            F    +             V    K+AV  ++  LQ+EF LK LG++ YFLGIEVT    
Sbjct: 1103 FYNKGSLTIFLLIYVDDIIVVSSRKEAVSALLQDLQKEFALKDLGDLHYFLGIEVTKIPG 1162

Query: 1030 EFRLCQQKYISELLERTNMLDCKPCSTPMAINTKLSKFEGKLF--SNPRLYRSTVGALQY 857
               + Q+KY S+LL+R NM DCK  +TP++ + KL   +G +   ++   YRS VGALQY
Sbjct: 1163 GILMSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGALQY 1222

Query: 856  LTLTRPDIAYSVNKLSQFIQSPFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSD 677
            LTLTR DIA+SVNK+ QF+ +P  EHWA+ KR+LRY+K    L L    SSS  +  +SD
Sbjct: 1223 LTLTRLDIAFSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSD 1282

Query: 676  ADWAGCIDGRRSTGGHCVFFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSL 497
            ADWAGC+D RRSTGG  V+ G NLV W++KKQ  VSRSS E+EY+ALAN TAE++W+ +L
Sbjct: 1283 ADWAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTL 1342

Query: 496  CLELGIPVSSPHQVWCDNSSAVALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSG 317
              EL I   +  Q+WCDN  A  LS NPVFHARTKHIEVD HF RE+VA K + V  VS 
Sbjct: 1343 LQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDYVST 1402

Query: 316  QEQVADIFTKPLTTERFEFLRSKLCL 239
             +QVAD FTK L  ++ E  +  L L
Sbjct: 1403 NDQVADGFTKALPVKQLENFKYNLNL 1428



 Score =  196 bits (498), Expect = 4e-47
 Identities = 93/166 (56%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGE++ L SF    GI    SCP+ H QNG AERKH+HI ++GL LLA +SMP  
Sbjct: 578  MQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSMPLK 637

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +AF +AVYLINR PS VL   +P   L    P+Y  L+ FGC C+P L+PYN+HKLQ
Sbjct: 638  FWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQ 697

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 2096
            F+S+ C FLGYS  HKG+KCL PS GR+YIS  V F+E +FP+  L
Sbjct: 698  FRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDETQFPFTKL 743


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  525 bits (1351), Expect = e-146
 Identities = 271/542 (50%), Positives = 358/542 (66%), Gaps = 3/542 (0%)
 Frame = -1

Query: 1846 TPVQNTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNK 1667
            T  Q  HHMVTRSK+GIFKP  V+ V +  + P    EA++ P W+EAM  EF AL+ NK
Sbjct: 716  TXPQQPHHMVTRSKNGIFKPX-VYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNK 774

Query: 1666 TWSLVPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNETFSPVVKT 1487
            TWSLV    +   +  +W++K+K   DGS+ + KARLVA+G+ Q+ G D+ ETFSPVVK 
Sbjct: 775  TWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKP 834

Query: 1486 TTIRLVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDY--VCKLEKS 1313
            TTIR+V ++A +++WCI+QLD+NNAFLNG L++ +YM QP GF+  T  +   VCKL K+
Sbjct: 835  TTIRVVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKA 894

Query: 1312 LYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVTGDDKD 1133
            LYGLKQAPRAW+D LK SL   GF    SD SLF + ++              VTG    
Sbjct: 895  LYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQ 954

Query: 1132 AVMGVISMLQQEFKLKHLGNVSYFLGIEVT-SSNSEFRLCQQKYISELLERTNMLDCKPC 956
             +  +IS L+  F LK LG +SYFLGIEV  +++    L Q+KYI +LL++T M   K  
Sbjct: 955  EIHELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSL 1014

Query: 955  STPMAINTKLSKFEGKLFSNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQSPFEEHW 776
             TPM    KLS   G    N   YRS VGALQY+T+TRP+IA+SVNK+ QF+Q P + HW
Sbjct: 1015 PTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHW 1074

Query: 775  ASCKRLLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFGSNLVVW 596
             + KR+LRYL GT  L +   PS +  +  F DADW   +D RRST GHCVF G +LV W
Sbjct: 1075 KAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSW 1134

Query: 595  SSKKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSAVALSAN 416
            SSKKQ   SRSS E+EYR+LA++T+E++WL SL  EL   ++    +WCDN S V+LSAN
Sbjct: 1135 SSKKQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSAN 1194

Query: 415  PVFHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLRSKLCLL 236
            PV H+RTKH+E+D++F REKV  + + V  V  ++QVAD+FTKPL+   F+ LR KL + 
Sbjct: 1195 PVLHSRTKHMELDLYFVREKVMERKLVVNHVPTEDQVADVFTKPLSFRFFDKLREKLTVA 1254

Query: 235  EL 230
             L
Sbjct: 1255 SL 1256



 Score =  208 bits (530), Expect = 9e-51
 Identities = 93/161 (57%), Positives = 121/161 (75%)
 Frame = -1

Query: 2587 QSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSF 2408
            Q+DWGGEFR L ++ +  GI  + SCP+   QNG  ERKH+HI ++GLTLLAQAS+P  +
Sbjct: 442  QTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKY 501

Query: 2407 WWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQF 2228
            W DAF TAV+LINRLP+ VL+ + P+  L+ + PNY QLK FGC C+P L+PYN+HKL F
Sbjct: 502  WPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDF 561

Query: 2227 KSSKCVFLGYSPNHKGYKCLHPSGRIYISDTVHFNEIEFPY 2105
            +SS C FLGYS  HKGYKCL+  GR++IS +V F+E  FP+
Sbjct: 562  RSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPF 602


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  523 bits (1348), Expect = e-145
 Identities = 274/543 (50%), Positives = 351/543 (64%), Gaps = 8/543 (1%)
 Frame = -1

Query: 1849 ATPVQNTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSE------ALADPGWQEAMRAEF 1688
            +TP       VT  + GI K K     +V     T   E      AL D  W+ AM A+F
Sbjct: 709  STPEGEASRPVTHLQKGIRKEKIYTDRTVKYGCLTTTGEPRDLHDALHDTNWKHAMDAKF 768

Query: 1687 SALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDKLKARLVARGFEQLAGIDYNET 1508
            +ALL NKTW LVP      +I  KW+YK+K K DGSLD+ KARLVA+GF+Q  GIDY +T
Sbjct: 769  TALLHNKTWHLVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDT 828

Query: 1507 FSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILEDNIYMAQPFGFEDSTYPDYVC 1328
            FSPVVK  TIR++ S+A +R W ++QLD+ NAFL+GILE+ +YM QP G+ED  +PDYVC
Sbjct: 829  FSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHPDYVC 888

Query: 1327 KLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASSTGXXXXXXXXXXXXVT 1148
            KL+K+LYGLKQAPRAWY  L + L  LGF+   +D SLFF                  V 
Sbjct: 889  KLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVA 948

Query: 1147 GDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLCQQKYISELLERTNMLD 968
               +DAV  ++  LQ++F LK LG++ YFLGIEV  ++S   L Q+KY+++LL R  M D
Sbjct: 949  SSRQDAVPALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTD 1008

Query: 967  CKPCSTPMAINTKLSKFEGKLF--SNPRLYRSTVGALQYLTLTRPDIAYSVNKLSQFIQS 794
            CKP STP++ + KL+  EG L   ++   YRS VGALQYLTLTRPDI + VNK+ QF+ +
Sbjct: 1009 CKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHA 1068

Query: 793  PFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSDADWAGCIDGRRSTGGHCVFFG 614
            P   HWA+ KR+LRYLK    L L  + S S  +  +SDADWAG ID RRSTGG  VF G
Sbjct: 1069 PTIVHWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLG 1128

Query: 613  SNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELGIPVSSPHQVWCDNSSA 434
             NLV W++KKQ  V RSS ESEY+ALAN TAE++W+ +L  EL +P     ++WCDN  A
Sbjct: 1129 DNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMARLWCDNLGA 1188

Query: 433  VALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVADIFTKPLTTERFEFLR 254
              LS+NPVFHARTKHIEVD HF RE++  K + V  +   +QVAD FTK L+  + E  +
Sbjct: 1189 KYLSSNPVFHARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQVADGFTKALSARQLENFK 1248

Query: 253  SKL 245
              L
Sbjct: 1249 YNL 1251



 Score =  198 bits (504), Expect = 9e-48
 Identities = 90/173 (52%), Positives = 123/173 (71%), Gaps = 1/173 (0%)
 Frame = -1

Query: 2590 IQSDWGGEFRPLVSFLQDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYS 2411
            +Q+DWGGE++ L +F    GI    SCP+ H QNG AERKH+HI ++GL+LLA AS+P  
Sbjct: 409  MQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLK 468

Query: 2410 FWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQ 2231
            FW +A+Q+ VYLINR+P+ VL + +P   L+K  P+Y+ L+ FGC C+P L+PYN HK+ 
Sbjct: 469  FWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPYNSHKMH 528

Query: 2230 FKSSKCVFLGYSPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPALFDSKSTS 2075
            F+S +C FLGYSP HKG++CL  S GRIYIS  V F+E  FP+  L  +  T+
Sbjct: 529  FRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVVFDESVFPFAELNPNAGTN 581


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  522 bits (1344), Expect = e-145
 Identities = 265/501 (52%), Positives = 337/501 (67%), Gaps = 2/501 (0%)
 Frame = -1

Query: 1735 EALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKADGSLDKLKARL 1556
            EAL D  W+EAM +E+ AL+ NKTW  VP      +I  KW+YKVK KADGSLD+ KARL
Sbjct: 529  EALGDKNWKEAMDSEYQALMKNKTWHRVPSKKGQNIIDCKWVYKVKRKADGSLDRYKARL 588

Query: 1555 VARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGILEDNIYM 1376
            VA+GF+Q  GIDY +TF PVVK  TIR + S+A +R W ++QLD+ NAFL+G+LE++++M
Sbjct: 589  VAKGFKQRYGIDYEDTFRPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFM 648

Query: 1375 AQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSLFFKASS 1196
             QP G+E      YVCKL+K+LYGLKQAPRAWY  L   L+ LGFK   SD SLFF +  
Sbjct: 649  RQPPGYEQKD--GYVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKG 706

Query: 1195 TGXXXXXXXXXXXXVTGDDKDAVMGVISMLQQEFKLKHLGNVSYFLGIEVTSSNSEFRLC 1016
                          V      A   ++  L QEF LK LG + YFLGIEV   N    L 
Sbjct: 707  DVTIFMLVYVDDIIVASSSIVATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNDGIVLT 766

Query: 1015 QQKYISELLERTNMLDCKPCSTPMAINTKLSKFEGKLFS--NPRLYRSTVGALQYLTLTR 842
            Q+KY  ++L+R NM DCK  +TP++I+ KLS  EG      +   YRS VGALQYLTLTR
Sbjct: 767  QEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTLTR 826

Query: 841  PDIAYSVNKLSQFIQSPFEEHWASCKRLLRYLKGTESLALHFTPSSSSCIEAFSDADWAG 662
            PD+++SVNK+ Q++ +   +HW + KR+LRYLK T  L L  + S+S  + AFSDADWAG
Sbjct: 827  PDLSFSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAG 886

Query: 661  CIDGRRSTGGHCVFFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHSLCLELG 482
            C+D RRSTGG  VF G NLV WS++KQ  VSRSS E+EY+ALAN TAE++W+ +L  ELG
Sbjct: 887  CLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQTLLHELG 946

Query: 481  IPVSSPHQVWCDNSSAVALSANPVFHARTKHIEVDVHFTREKVAAKFINVGSVSGQEQVA 302
            I V    +VWCDN  A  ++ANPVFHARTKHIEVD HF RE+VA K + V  +S ++QVA
Sbjct: 947  IQVPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVA 1006

Query: 301  DIFTKPLTTERFEFLRSKLCL 239
            D FTK L+  + E  R+ L L
Sbjct: 1007 DGFTKTLSVRQLEMFRNNLNL 1027