BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00016578
         (2745 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus...  1225   0.0  
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...  1171   0.0  
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1168   0.0  
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1165   0.0  
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1160   0.0  
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]      1137   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1128   0.0  
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...  1126   0.0  
emb|CBI36559.3| unnamed protein product [Vitis vinifera]             1117   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1117   0.0  
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...  1112   0.0  
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof...  1108   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...  1107   0.0  
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...  1102   0.0  
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1098   0.0  
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1098   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1096   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...  1090   0.0  
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]     1077   0.0  
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr...  1062   0.0  

>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
          Length = 941

 Score = 1225 bits (3170), Expect = 0.0
 Identities = 602/717 (83%), Positives = 652/717 (90%), Gaps = 1/717 (0%)
 Frame = -2

Query: 2741 EVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFE 2562
            EVRI +FL+K K ++K+E+  E +  SS E  I+R+RVK LIKRNRV EV KL+RSEEF+
Sbjct: 225  EVRIHSFLEKMKKNEKREIGDESQVDSSNEAVIMRKRVKSLIKRNRVIEVHKLVRSEEFK 284

Query: 2561 SWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKK 2382
            SWGRD QAKLGCCL+ELLTQSAYVQPP++Q+ADSPPDVRPAFRHIFKIA R PGQ+IVK+
Sbjct: 285  SWGRDIQAKLGCCLIELLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRLPGQTIVKR 344

Query: 2381 YGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQ 2202
            YG IECDPLVL GLDKTV+HMIIPYVPMLVPPK+WKGYD+GGYLFLPSYLMRTHGSR QQ
Sbjct: 345  YGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWKGYDRGGYLFLPSYLMRTHGSRHQQ 404

Query: 2201 DAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPEL 2022
            DAV+ V  KQMQKVYEALDTLGNTKWRVN+RIL VVEN+WAAGG++AGLVNRE++PIPEL
Sbjct: 405  DAVKTVTSKQMQKVYEALDTLGNTKWRVNKRILTVVENIWAAGGNIAGLVNREDIPIPEL 464

Query: 2021 L-SDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGR 1845
            L S+D KE            KINQERHSQRCD ELKLSVAR MKDEEGFYYPHNLDFRGR
Sbjct: 465  LLSEDMKEAKKWKWSVRKVKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGR 524

Query: 1844 AYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFV 1665
            AYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIH+ANLYGGGVEKLSYD RV+FV
Sbjct: 525  AYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHVANLYGGGVEKLSYDDRVAFV 584

Query: 1664 ENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGS 1485
            ENNI+EI DSADNSLNGNRWWLKAEDPFQCLAACINL EALKS SPHTVISHLPIHQDGS
Sbjct: 585  ENNISEIFDSADNSLNGNRWWLKAEDPFQCLAACINLVEALKSPSPHTVISHLPIHQDGS 644

Query: 1484 CNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLA 1305
            CNGLQHYAALGRDSFEAAAVNLVAGD+PSDVYSEIAERVH IMKRDSEKDPETD +AL+A
Sbjct: 645  CNGLQHYAALGRDSFEAAAVNLVAGDKPSDVYSEIAERVHNIMKRDSEKDPETDRHALIA 704

Query: 1304 KLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 1125
            K+LIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI+DDKLLFSA+CYAA+VT+
Sbjct: 705  KVLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDKLLFSAACYAAKVTL 764

Query: 1124 AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 945
            AAL ELFQAARAIM WLG+CAKII  EN PVRWTTPLGLPVVQPYFKSQRHVI+TSLQVL
Sbjct: 765  AALGELFQAARAIMAWLGDCAKIIASENEPVRWTTPLGLPVVQPYFKSQRHVIRTSLQVL 824

Query: 944  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 765
            ALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTAIACR+AGLRFAGVHDSFWTHACDVD
Sbjct: 825  ALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVD 884

Query: 764  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            RMNQILRQKFV+LYSMP+LENLLESF+           P RGDF LE+V+ESPYFFN
Sbjct: 885  RMNQILRQKFVDLYSMPILENLLESFETSYPTLKFPPLPNRGDFLLEQVIESPYFFN 941


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score = 1171 bits (3030), Expect = 0.0
 Identities = 570/716 (79%), Positives = 641/716 (89%)
 Frame = -2

Query: 2741 EVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFE 2562
            EVRI NFL+K K  QK    A+ +E  S+E  ILR+RVK LIKRNRV EV+KL++SEE E
Sbjct: 262  EVRIHNFLEKTKKLQKHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPE 321

Query: 2561 SWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKK 2382
            SWGRDTQAKLGC LLELLT++AYVQPP+DQ+AD+PPD+RPAFRH+F+IA R+PG+SIVKK
Sbjct: 322  SWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKK 381

Query: 2381 YGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQ 2202
            YG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGGYLFLPSYLMRTHGSRRQQ
Sbjct: 382  YGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQ 441

Query: 2201 DAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPEL 2022
            DAVR+VP KQMQ+VYEALDTLG+TKWRVN+RIL+VVE++WA GG++AGLV+R++VPIPEL
Sbjct: 442  DAVRSVPTKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPEL 501

Query: 2021 LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRA 1842
             SDD  E+           KINQE HSQRCD ELKLSVAR +KDEEGFYYPHNLDFRGRA
Sbjct: 502  HSDDIMEVKKWKWRVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRA 561

Query: 1841 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 1662
            YPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GG+EKL YDAR++FVE
Sbjct: 562  YPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVE 621

Query: 1661 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 1482
            N+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTV SHLPIHQDGSC
Sbjct: 622  NHIDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSC 681

Query: 1481 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 1302
            NGLQHYAALGRDS EAAAVNLVAGD+P+DVY+EIA RV  I++ DS KDP TDPNALLAK
Sbjct: 682  NGLQHYAALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAK 741

Query: 1301 LLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMA 1122
            LLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+A
Sbjct: 742  LLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLA 801

Query: 1121 ALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLA 942
            AL ELFQAAR  M WLG+CAK+I  EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQVLA
Sbjct: 802  ALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLA 861

Query: 941  LQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDR 762
            LQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL+FAGVHDSFWTHACDVD+
Sbjct: 862  LQREGDTVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQ 921

Query: 761  MNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            MN+ILR+KFVELYSMP+LE+LLESFQ           P+RGDFDL +VLESPYFFN
Sbjct: 922  MNRILREKFVELYSMPILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            tuberosum]
          Length = 1015

 Score = 1168 bits (3022), Expect = 0.0
 Identities = 566/716 (79%), Positives = 640/716 (89%)
 Frame = -2

Query: 2741 EVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFE 2562
            EVRI NF++K K  QK    A+G+E  S+E  ILR+RVK LIKRNRV EV+KL++SEE E
Sbjct: 300  EVRIHNFMEKTKKHQKHMSGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPE 359

Query: 2561 SWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKK 2382
            SWGRDTQAKLGC LLELLT++AYVQPP+DQ+AD+PPD+RPAFRH+F+IA R+PG++IVKK
Sbjct: 360  SWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKK 419

Query: 2381 YGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQ 2202
            YG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGGYLFLPSYLMRTHGSRRQQ
Sbjct: 420  YGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQ 479

Query: 2201 DAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPEL 2022
            DAVR+VP KQMQ+VYEALDTLG+TKWRVN+RIL+VVE++WA GG++AGLV+R++VPIPEL
Sbjct: 480  DAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPEL 539

Query: 2021 LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRA 1842
             SDD  E+           KINQE HSQRCD ELKLSVAR +KDEEGFYYPHNLDFRGRA
Sbjct: 540  HSDDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRA 599

Query: 1841 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 1662
            YPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HLA+LY GG+EKL YDAR++FVE
Sbjct: 600  YPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVE 659

Query: 1661 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 1482
            N+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEALKS SPHTVISHLPIHQDGSC
Sbjct: 660  NHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSC 719

Query: 1481 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 1302
            NGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP TDPNALLAK
Sbjct: 720  NGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAK 779

Query: 1301 LLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMA 1122
            LLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+A
Sbjct: 780  LLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLA 839

Query: 1121 ALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLA 942
            AL ELFQAAR  M WLG+CAK+I  EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQVLA
Sbjct: 840  ALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLA 899

Query: 941  LQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDR 762
            LQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD+
Sbjct: 900  LQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQ 959

Query: 761  MNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            MN+ILR+KFVELYSMP+LE+LLESFQ           P+RGDFDL++VLESPYFFN
Sbjct: 960  MNRILREKFVELYSMPILEDLLESFQESYPALTFPPLPKRGDFDLQEVLESPYFFN 1015


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            lycopersicum]
          Length = 1007

 Score = 1165 bits (3014), Expect = 0.0
 Identities = 564/716 (78%), Positives = 638/716 (89%)
 Frame = -2

Query: 2741 EVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFE 2562
            EVRI NF++K K  QK    A+G+E  S+E  ILR+RVK LIKRNRV EV+KL++SEE E
Sbjct: 292  EVRIHNFMEKTKKHQKHMTGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPE 351

Query: 2561 SWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKK 2382
            SWGRDTQAKLGC LLELLT++AYVQPP+DQ+AD+PPD+RPAFRH+F+IA R+PG++IVKK
Sbjct: 352  SWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKK 411

Query: 2381 YGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQ 2202
            YG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGGYLFLPSYLMRTHGSRRQQ
Sbjct: 412  YGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQ 471

Query: 2201 DAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPEL 2022
            DAVR+VP KQMQ+VYEALDTLG+TKWRVN+RIL+VVE +WA GG++AGLV+R++VPIPEL
Sbjct: 472  DAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVETIWAGGGNIAGLVDRKDVPIPEL 531

Query: 2021 LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGRA 1842
             SDD  E+           KINQE HSQRCD ELKLSVAR ++DEEGFYYPHNLDFRGRA
Sbjct: 532  HSDDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRA 591

Query: 1841 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 1662
            YPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HLA+LY GG+EKL YDAR++FVE
Sbjct: 592  YPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVE 651

Query: 1661 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 1482
            N+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEA+KS SPHTVISHLPIHQDGSC
Sbjct: 652  NHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSC 711

Query: 1481 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 1302
            NGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP TDPNALLAK
Sbjct: 712  NGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAK 771

Query: 1301 LLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTMA 1122
            LLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+A
Sbjct: 772  LLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLA 831

Query: 1121 ALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVLA 942
            AL ELFQAAR  M WLG+CAK+I  EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQVLA
Sbjct: 832  ALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLA 891

Query: 941  LQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVDR 762
            LQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDVD+
Sbjct: 892  LQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQ 951

Query: 761  MNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            MN+ILR+KFVELYSMP+LE+LLESFQ           P+RGDFDL +VLESPYFFN
Sbjct: 952  MNRILREKFVELYSMPILEDLLESFQESYPALTFPPLPKRGDFDLREVLESPYFFN 1007


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score = 1160 bits (3000), Expect = 0.0
 Identities = 567/717 (79%), Positives = 639/717 (89%), Gaps = 1/717 (0%)
 Frame = -2

Query: 2741 EVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEFE 2562
            EVRI NFL+K K  QK    A+ +E  SKE  ILR+RVK LIKRNRV EV+KL++SEE E
Sbjct: 261  EVRIHNFLEKTKKLQKHMTGAQSQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPE 320

Query: 2561 SWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVKK 2382
            SWGRDTQAKLGC LLELLT++AYVQ P+DQ+AD+PPD+RPAFRH+FKIA R+PG++IVKK
Sbjct: 321  SWGRDTQAKLGCRLLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKK 380

Query: 2381 YGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQQ 2202
            YG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+W+GYDKGGYLFLPSYLMRTHGSRRQQ
Sbjct: 381  YGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQ 440

Query: 2201 DAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPEL 2022
            DAVR VP KQMQ+VYEALDTLG+TKWRVN+RILNVVE++WA GG++AGLV+R++VPIPEL
Sbjct: 441  DAVRGVPTKQMQQVYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDRKDVPIPEL 500

Query: 2021 L-SDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGR 1845
              SDD  E+           KINQE HSQRCD ELKLSVAR +KDEEGFYYPHNLDFRGR
Sbjct: 501  SNSDDIMEVKKWKWKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGR 560

Query: 1844 AYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFV 1665
            AYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GGVEKL YDAR++FV
Sbjct: 561  AYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFV 620

Query: 1664 ENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGS 1485
            EN+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGS
Sbjct: 621  ENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGS 680

Query: 1484 CNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLA 1305
            CNGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP  DPNALLA
Sbjct: 681  CNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLA 740

Query: 1304 KLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 1125
            KLLI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI DD+LLF+ASCYAA+VT+
Sbjct: 741  KLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTL 800

Query: 1124 AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 945
            AAL ELFQAAR  M WLG+CAK+I  EN PVRWTTPLGLPVVQPYFK+QRHVI+TSLQ+L
Sbjct: 801  AALGELFQAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQIL 860

Query: 944  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 765
            ALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL+FAGVHDSFWTHACDVD
Sbjct: 861  ALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVD 920

Query: 764  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            +MN+ILR+KFVELYS+P+LE+LLE+FQ           P+RGDF+L +VLESPYFFN
Sbjct: 921  QMNRILREKFVELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 977


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score = 1137 bits (2940), Expect = 0.0
 Identities = 549/717 (76%), Positives = 627/717 (87%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI  FL+K K+ QK+ V +E +E S ++   LR+RVK L++R R  EVQKL++SE  
Sbjct: 237  QEVRIHAFLEKTKH-QKEAVASESQENSCEKAANLRKRVKNLVRRGRGVEVQKLVKSENH 295

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            E W R+ QAKLGCCL+ LLTQSAYVQPP+ Q+ADSPPDVRPAFRH FKIA REP Q++V+
Sbjct: 296  EPWTREIQAKLGCCLINLLTQSAYVQPPVSQSADSPPDVRPAFRHFFKIATREPRQTVVR 355

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            +YG IECDPL+L G +  V+HM++P++PML+PPK+WKGYDKGGYLFLPSY+MRTHGSRRQ
Sbjct: 356  RYGVIECDPLILDGFESNVKHMMVPHIPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRRQ 415

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDAV+ V  ++MQKV+EALDTLGNTKWRVN+ IL+VVE++WAAGG++AGLVNRE+VP+PE
Sbjct: 416  QDAVKTVSPRKMQKVFEALDTLGNTKWRVNKSILSVVEDIWAAGGNIAGLVNREDVPLPE 475

Query: 2024 LLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGR 1845
            L SDD  EI           K N E HS RCD ELKLSVAR MKDEEGFYYPHN+DFRGR
Sbjct: 476  LHSDDPIEIKKWKFSIRKAKKNNMEMHSLRCDTELKLSVARAMKDEEGFYYPHNVDFRGR 535

Query: 1844 AYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFV 1665
            AYPMHPHLNHLSSDLCRGILEF++GRPLGKSGL WLK+HLANL+GGGV+KL YD R+SFV
Sbjct: 536  AYPMHPHLNHLSSDLCRGILEFSEGRPLGKSGLYWLKLHLANLFGGGVQKLPYDERLSFV 595

Query: 1664 ENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGS 1485
            ENNI E+ DSADN L+GNRWWLKAEDPFQ LAACIN+SEAL+SSSPHTVISHLPIHQDGS
Sbjct: 596  ENNITEVFDSADNPLSGNRWWLKAEDPFQFLAACINISEALRSSSPHTVISHLPIHQDGS 655

Query: 1484 CNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLA 1305
            CNGLQHYAALGRDSFEAAAVNLVAG +P+DVYSEIAERV  IMK DSEKDP  DPNA+LA
Sbjct: 656  CNGLQHYAALGRDSFEAAAVNLVAGHKPTDVYSEIAERVLDIMKSDSEKDPADDPNAVLA 715

Query: 1304 KLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 1125
            KLLIGQVDRKLVKQTVMTSVYGVTYVGAREQI++RL EKG I+DDK+LF A+CYAA+VTM
Sbjct: 716  KLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIRKRLAEKGFINDDKVLFMAACYAAKVTM 775

Query: 1124 AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 945
            AAL +LFQAARAIM WLG+CAKII  EN PVRWTTPLGLPVVQPYFK++RHVI+TSLQVL
Sbjct: 776  AALGQLFQAARAIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTKRHVIRTSLQVL 835

Query: 944  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 765
            ALQREGD VEVRKQ+TAFPPNFVHSLDG+HMMMTA+ACR+AGLRFAGVHDSFWTHACDVD
Sbjct: 836  ALQREGDSVEVRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGVHDSFWTHACDVD 895

Query: 764  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            +MNQILR+KFV+LYSMP+LE+LLESFQ           P+RGDFDL  VL+SPYFFN
Sbjct: 896  KMNQILREKFVDLYSMPILEDLLESFQSSYPTLRFPPLPKRGDFDLRNVLDSPYFFN 952


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 973

 Score = 1128 bits (2917), Expect = 0.0
 Identities = 543/718 (75%), Positives = 625/718 (87%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI +FL+K K+ Q+K+     E+G SKE  ILR+RV  LI+R R+ EVQKLL+ E+ 
Sbjct: 256  QEVRIHSFLEKSKSLQRKKTSVADEDGLSKEKEILRKRVNGLIRRKRLVEVQKLLKKEDM 315

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + WGRDTQAKLG  L+ELLT++A+VQPP+DQ AD PPDVRPAFRH  K AA+ PGQ +VK
Sbjct: 316  KPWGRDTQAKLGSRLIELLTETAHVQPPLDQLADGPPDVRPAFRHRLKAAAKSPGQKLVK 375

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
             YG IECDPLVL GLDKT +HM+IPYVPMLVPPKRWKGYDKGG+LFLPSY+MRTHGSR+Q
Sbjct: 376  NYGVIECDPLVLAGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQ 435

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
             D +R +  +QMQKV+EALD LG+TKWR+N+++LNVVE++WA GG++AGLV+RE+VP+PE
Sbjct: 436  VDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLNVVESIWARGGNIAGLVDREDVPVPE 495

Query: 2024 LL-SDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
               S+D  EI           K+NQERHSQRCD ELKLSVAR MKDE+GFYYPHNLDFRG
Sbjct: 496  KPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTELKLSVARRMKDEDGFYYPHNLDFRG 555

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANLY GGVEKLSYD R+SF
Sbjct: 556  RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYSGGVEKLSYDGRISF 615

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            V+N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTVISHLPIHQDG
Sbjct: 616  VDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDG 675

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KDP T+PNALL
Sbjct: 676  SCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNPNALL 735

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+L+ Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI+DD+LLF+A+CYAA+VT
Sbjct: 736  AKVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVT 795

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            +AAL E+FQAAR IM WLG+CAK+I  EN PVRWTTPLGLPVVQPY KS+RH+I+TSLQV
Sbjct: 796  LAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQV 855

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQRE +LV+VRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AG+RFAGVHDSFWTHACDV
Sbjct: 856  LALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMTALACRDAGIRFAGVHDSFWTHACDV 915

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D+MNQILR+ FVELYS P+LENLLESFQ           PERGDFDL++VL+SPYFFN
Sbjct: 916  DQMNQILRENFVELYSKPILENLLESFQAAYPELTFPPLPERGDFDLQEVLKSPYFFN 973


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
            gi|462398756|gb|EMJ04424.1| hypothetical protein
            PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score = 1126 bits (2912), Expect = 0.0
 Identities = 548/718 (76%), Positives = 621/718 (86%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI +FL+K KN QKK+     E+G SKE  ILR+RV  LI+R R+ EVQKLL  EE 
Sbjct: 259  QEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVNGLIRRKRLNEVQKLLIKEEM 318

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + WGRD QAKLG  L+ELLT++AYVQPP+ Q ADSPPDVRPAFRH FK  A+ PGQ IVK
Sbjct: 319  KPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPDVRPAFRHRFKAVAKSPGQKIVK 378

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
             YG IECDPLVL GLDKT +HM+IPYVPMLVPPKRWKGYDKGG+LFLPSY+MRTHGSR+Q
Sbjct: 379  NYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQ 438

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
             DA+R +   QMQKV+EALD LG+TKWRVN+++L+VVE++WA GG++AGLVNRE+VP+P+
Sbjct: 439  VDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDVPVPD 498

Query: 2024 LL-SDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
               S+D KEI           KINQERHSQRCD ELKLSVAR MKDEEGFYYPHNLDFRG
Sbjct: 499  KSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRG 558

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANLY GGVEKLSY+ R++F
Sbjct: 559  RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGRLAF 618

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            V+N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTVISHLPIHQDG
Sbjct: 619  VDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDG 678

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGRDS EAAAVNLV GD+P+DVYSEIA RVH IMKRDS KDP T PNALL
Sbjct: 679  SCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPNALL 738

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            A++L+ Q+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLI+DD+LLF+A+CYAA+VT
Sbjct: 739  ARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVT 798

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            +AAL E+FQAAR IM WLG+CAK+I  EN PVRWTTPLGLPVVQPY KS+RH+I+TSLQV
Sbjct: 799  LAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQV 858

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQRE + V++RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGLRFAGVHDSFWTH CDV
Sbjct: 859  LALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHPCDV 918

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D+MN+ILR+KFVELYSMP+LE+LLESFQ           PERGDFDL +VLESPYFFN
Sbjct: 919  DQMNEILREKFVELYSMPILESLLESFQASYPALTFPPLPERGDFDLLQVLESPYFFN 976


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 1117 bits (2890), Expect = 0.0
 Identities = 537/718 (74%), Positives = 625/718 (87%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI +FL+K KN ++ + V   +EG  +E  ILR+RVK  I++ ++ EVQKL+++EE 
Sbjct: 92   QEVRIHSFLEKTKNFERHKTVGHSQEGL-REKEILRKRVKSFIRKKKIIEVQKLVKNEEI 150

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
              WGRDTQAKLG  L+ELLT++AYVQ P++Q+AD PPDVRPAFRH FK   +E GQ   +
Sbjct: 151  TPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWR 210

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            KYG IECDPLVL GLD+T +HM+IPYVPML+PPK+WKGYDKGGYLFLPSY+MRTHGSR+Q
Sbjct: 211  KYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 270

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDAV++VP +Q+QKV+EALDTLGNTKWR+NRR+L+VVE++WA GG++ GLV+RENVP+PE
Sbjct: 271  QDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPE 330

Query: 2024 LLS-DDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
              S +D  EI           KINQERHS RCD E+KLSVAR MKDEEGFYYPHNLDFRG
Sbjct: 331  KPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRG 390

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGVEKLSYD R++F
Sbjct: 391  RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAF 450

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            V+N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTVISHLPIHQDG
Sbjct: 451  VDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDG 510

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS KDP TDP ALL
Sbjct: 511  SCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALL 570

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+LIGQVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKGLI+D++LLF+A+CYAA+VT
Sbjct: 571  AKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVT 630

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            +AAL E+FQAAR IM WLG CAK+I  EN PV+WTTPLGLPV+QPY KS+RH+I+TSLQV
Sbjct: 631  LAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQV 690

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQREG +V +RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDV
Sbjct: 691  LALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDV 750

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D+MNQILR+KFVELYSMP+LENLLESFQ           P+RG+FDL +VLESPYFFN
Sbjct: 751  DKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 808


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1117 bits (2890), Expect = 0.0
 Identities = 537/718 (74%), Positives = 625/718 (87%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI +FL+K KN ++ + V   +EG  +E  ILR+RVK  I++ ++ EVQKL+++EE 
Sbjct: 263  QEVRIHSFLEKTKNFERHKTVGHSQEGL-REKEILRKRVKSFIRKKKIIEVQKLVKNEEI 321

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
              WGRDTQAKLG  L+ELLT++AYVQ P++Q+AD PPDVRPAFRH FK   +E GQ   +
Sbjct: 322  TPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWR 381

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            KYG IECDPLVL GLD+T +HM+IPYVPML+PPK+WKGYDKGGYLFLPSY+MRTHGSR+Q
Sbjct: 382  KYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 441

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDAV++VP +Q+QKV+EALDTLGNTKWR+NRR+L+VVE++WA GG++ GLV+RENVP+PE
Sbjct: 442  QDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPE 501

Query: 2024 LLS-DDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
              S +D  EI           KINQERHS RCD E+KLSVAR MKDEEGFYYPHNLDFRG
Sbjct: 502  KPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRG 561

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGVEKLSYD R++F
Sbjct: 562  RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAF 621

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            V+N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTVISHLPIHQDG
Sbjct: 622  VDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDG 681

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS KDP TDP ALL
Sbjct: 682  SCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALL 741

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+LIGQVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKGLI+D++LLF+A+CYAA+VT
Sbjct: 742  AKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVT 801

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            +AAL E+FQAAR IM WLG CAK+I  EN PV+WTTPLGLPV+QPY KS+RH+I+TSLQV
Sbjct: 802  LAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQV 861

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQREG +V +RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDV
Sbjct: 862  LALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDV 921

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D+MNQILR+KFVELYSMP+LENLLESFQ           P+RG+FDL +VLESPYFFN
Sbjct: 922  DKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
            gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 1112 bits (2875), Expect = 0.0
 Identities = 534/718 (74%), Positives = 631/718 (87%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI NFL+K KN Q+K+   E  +G SKE  IL++RV  LI+R R+ EVQKL+++EE 
Sbjct: 262  QEVRIHNFLEKTKNYQRKKTTDE-VQGLSKEKEILKKRVNSLIRRRRLVEVQKLVKNEEI 320

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + WGRD QAKLG  LLELLT++AYVQPPIDQ+ DSPPDV+PAFRH FK  +++PG+ ++K
Sbjct: 321  KPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMK 380

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            +YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+WKGYDKGGYLFLPSY+MRTHGSR+Q
Sbjct: 381  RYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 440

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDA++ V VK+MQKV+EALDTLG+TKWRVN+++L VVE++WA+GG++AGLV+R ++PIPE
Sbjct: 441  QDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIPIPE 500

Query: 2024 L-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
               S+D  E            KIN+ERHSQRCD ELKLSVAR M++EEGFYYPHNLDFRG
Sbjct: 501  KPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRG 560

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSDLCRG+LEFA+GRPLG+SGL WLKIHLANL+ GGVEKLS+D R++F
Sbjct: 561  RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAF 620

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            V+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSSSPH+V+S+LPIHQDG
Sbjct: 621  VDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDG 680

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMKRDS+KDP T+PNA L
Sbjct: 681  SCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASL 740

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD++LF+A+CY A+VT
Sbjct: 741  AKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVT 800

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            +AAL ELFQAAR IMGWLG+CAK+I  EN PV+WTTPLGLPVVQPY+KS+RH+I+TSLQV
Sbjct: 801  LAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQV 860

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQREGD VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDV
Sbjct: 861  LALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDV 920

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            ++MNQILR+KFVELYSMPVLENL ES Q           PERG+FDL +VL+SPYFFN
Sbjct: 921  EKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLKSPYFFN 978


>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
            gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
            superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score = 1108 bits (2866), Expect = 0.0
 Identities = 534/719 (74%), Positives = 632/719 (87%), Gaps = 2/719 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI NFL+K KN Q+K+   E  +G SKE  IL++RV  LI+R R+ EVQKL+++EE 
Sbjct: 140  QEVRIHNFLEKTKNYQRKKTTDE-VQGLSKEKEILKKRVNSLIRRRRLVEVQKLVKNEEI 198

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + WGRD QAKLG  LLELLT++AYVQPPIDQ+ DSPPDV+PAFRH FK  +++PG+ ++K
Sbjct: 199  KPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMK 258

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            +YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+WKGYDKGGYLFLPSY+MRTHGSR+Q
Sbjct: 259  RYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 318

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDA++ V VK+MQKV+EALDTLG+TKWRVN+++L VVE++WA+GG++AGLV+R ++PIPE
Sbjct: 319  QDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIPIPE 378

Query: 2024 L-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
               S+D  E            KIN+ERHSQRCD ELKLSVAR M++EEGFYYPHNLDFRG
Sbjct: 379  KPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRG 438

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSDLCRG+LEFA+GRPLG+SGL WLKIHLANL+ GGVEKLS+D R++F
Sbjct: 439  RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAF 498

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            V+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSSSPH+V+S+LPIHQDG
Sbjct: 499  VDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDG 558

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMKRDS+KDP T+PNA L
Sbjct: 559  SCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASL 618

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD++LF+A+CY A+VT
Sbjct: 619  AKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVT 678

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            +AAL ELFQAAR IMGWLG+CAK+I  EN PV+WTTPLGLPVVQPY+KS+RH+I+TSLQV
Sbjct: 679  LAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQV 738

Query: 947  LALQREGD-LVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACD 771
            LALQREGD +VEVRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACD
Sbjct: 739  LALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACD 798

Query: 770  VDRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            V++MNQILR+KFVELYSMPVLENL ES Q           PERG+FDL +VL+SPYFFN
Sbjct: 799  VEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLKSPYFFN 857


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score = 1107 bits (2864), Expect = 0.0
 Identities = 537/718 (74%), Positives = 618/718 (86%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI NFL+K KN Q+K+ + E +E   KE  +LR+RV  LI+R R+ EVQ L++ +E 
Sbjct: 165  QEVRIHNFLEKTKNYQRKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDET 224

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + W R TQAKLG  L+ELLT++AYVQPP++Q+ D PPDVRPAFRHIFK   + PGQ IVK
Sbjct: 225  KPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVK 284

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            KYG IECDPL+L GLD T +HM+IPY PMLVPPK+WKGYDKGG+LFLPSY+MRTHGSR+Q
Sbjct: 285  KYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQ 344

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            Q AVR+VP KQMQKV+EALDTLGNTKWRVNRR+L+VVE +W +GG++AGLV+RE++PIPE
Sbjct: 345  QVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPE 404

Query: 2024 L-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
               SDD  EI           KINQERHSQRCD ELKLSVAR +KDEEGFYYPHNLDFRG
Sbjct: 405  KPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRG 464

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHL HLSSDLCRG+LEF +GRPLGKSGLRWLKIHLANLY GGVEKLS+D R++F
Sbjct: 465  RAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAF 524

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            VEN+++EI DSA N +NG RWWLKAEDPFQCLAACINLSEAL S+SPHTVISHLPIHQDG
Sbjct: 525  VENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDG 584

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGRD+ EAAAVNLVA ++PSDVYSEIA RVH I++RDS KDP T+P+ALL
Sbjct: 585  SCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALL 644

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+L+ QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG I+DD+LLFSA+CY A+VT
Sbjct: 645  AKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVT 704

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            + AL ELFQAAR IM WLG+CAKII  E+ PV+WTTPLGLPVVQPY+K++RH+IKTSLQ+
Sbjct: 705  LTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQI 764

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQREG  V+VRKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHA DV
Sbjct: 765  LALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDV 824

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D MN+ILR+KFVELY+MP+LENLLE FQ           PERG+FDL+KVL SPYFFN
Sbjct: 825  DLMNRILREKFVELYNMPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLRSPYFFN 882


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score = 1102 bits (2851), Expect = 0.0
 Identities = 536/718 (74%), Positives = 617/718 (85%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI NFL+K KN Q+K+ + + +E   KE  +LR+RV  LI+R R+ EVQ L+  +E 
Sbjct: 265  QEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDET 324

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + W RD QAKLG  L+ELLT++AYVQPP+DQ+   PPDVRPAFRHIFK   + PGQ  VK
Sbjct: 325  KPWNRDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNPGQKTVK 384

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            KYG IECDPL+L GLD T +HM+IPY PMLVPPK+W+GYDKGG+LFLPSY+MRTHGSR+Q
Sbjct: 385  KYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQ 444

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDAVR+VP KQMQKV+EALDTLGNTKWRVN ++L+VVE +WA+GG+ AGLVNR ++PIPE
Sbjct: 445  QDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGDIPIPE 504

Query: 2024 LLS-DDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
             LS DD  EI           KINQERHSQRCD ELKLSVAR +KDEEGFYYPHNLDFRG
Sbjct: 505  KLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRG 564

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHL HLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+D R++F
Sbjct: 565  RAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAF 624

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            VEN+++EI DSA+N +NG RWWL AEDPFQCLAACINLSEALKS+SPHTVISHLPIHQDG
Sbjct: 625  VENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIHQDG 684

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGRDS EAAAVNLVA ++PSDVYSEIA RVH I++RDS KDP T+P+ALL
Sbjct: 685  SCNGLQHYAALGRDSQEAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATNPHALL 744

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+LI +VDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG I+DD++LFSA+CYAA+VT
Sbjct: 745  AKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAACYAAKVT 804

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            + AL ELFQAAR IMGWLG+CAK+I  E+ PVRWTTPLGLPVVQPY+K+QRH+I+TSLQV
Sbjct: 805  LTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIRTSLQV 864

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQREG  V+VRKQRTAFPPNFVHSLDG+HMMMTA+ACR+A LRFAGVHDSFWTHA D 
Sbjct: 865  LALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWTHARDA 924

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D MN+ILR+KFVELY+MP+LENLLE FQ           PERG+FDL++VL SPYFFN
Sbjct: 925  DLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPSLPERGNFDLQEVLRSPYFFN 982


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 1098 bits (2839), Expect = 0.0
 Identities = 529/717 (73%), Positives = 624/717 (87%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRIQ+ L+K +++Q+ +V A+  E  +KE  +LR++V  LI+R ++ EVQKLL+ EEF
Sbjct: 260  QEVRIQSILEKARSNQRTKVRAD-TECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEF 318

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            ++WGRDTQAKLG  L+ELL +SA++QPP+ Q+ADSPPD+RPAF H FK  A+ PGQ+ VK
Sbjct: 319  KAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVK 378

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            KYG +ECDP+VL GLD+T +HM+IPY+PMLVPPK+WKGYDKGG+ FLPSY+MRTHGS RQ
Sbjct: 379  KYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQ 438

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDA++ +  KQMQKV+EALD LG+TKWRVNR +L+VVE+LWA GG+ AGLV+R++VPIPE
Sbjct: 439  QDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPE 498

Query: 2024 LLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGR 1845
                D  E+           KINQE HSQRCDVELKLSVAR MKDEEGFYYPHNLDFRGR
Sbjct: 499  KPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGR 558

Query: 1844 AYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFV 1665
            AYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV
Sbjct: 559  AYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFV 618

Query: 1664 ENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGS 1485
            ++++  I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS+PHTVIS+LPIHQDGS
Sbjct: 619  DDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGS 678

Query: 1484 CNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLA 1305
            CNGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM RD+ KDP T+PNA LA
Sbjct: 679  CNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLA 738

Query: 1304 KLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 1125
            KLLI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKGLISDD+L F ASCYAA+VT+
Sbjct: 739  KLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTL 798

Query: 1124 AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 945
            +AL E+F+AAR IMGWLG+CAK+I ++N PVRWTTPLGLPVVQPY+KS+RH+I+TSLQVL
Sbjct: 799  SALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVL 858

Query: 944  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 765
            ALQREG+LV+VRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGLRFAGVHDSFWTHACDVD
Sbjct: 859  ALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVD 918

Query: 764  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            RMN ILR+KFVELYSMPVLE+LLE F+           P RGDFDL++VL+SPYFFN
Sbjct: 919  RMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 975


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 1098 bits (2839), Expect = 0.0
 Identities = 529/717 (73%), Positives = 624/717 (87%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRIQ+ L+K +++Q+ +V A+  E  +KE  +LR++V  LI+R ++ EVQKLL+ EEF
Sbjct: 260  QEVRIQSILEKARSNQRTKVRAD-TECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEF 318

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            ++WGRDTQAKLG  L+ELL +SA++QPP+ Q+ADSPPD+RPAF H FK  A+ PGQ+ VK
Sbjct: 319  KAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVK 378

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            KYG +ECDP+VL GLD+T +HM+IPY+PMLVPPK+WKGYDKGG+ FLPSY+MRTHGS RQ
Sbjct: 379  KYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQ 438

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDA++ +  KQMQKV+EALD LG+TKWRVNR +L+VVE+LWA GG+ AGLV+R++VPIPE
Sbjct: 439  QDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPE 498

Query: 2024 LLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRGR 1845
                D  E+           KINQE HSQRCDVELKLSVAR MKDEEGFYYPHNLDFRGR
Sbjct: 499  KPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGR 558

Query: 1844 AYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFV 1665
            AYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV
Sbjct: 559  AYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFV 618

Query: 1664 ENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGS 1485
            ++++  I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS+PHTVIS+LPIHQDGS
Sbjct: 619  DDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGS 678

Query: 1484 CNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLA 1305
            CNGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM RD+ KDP T+PNA LA
Sbjct: 679  CNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLA 738

Query: 1304 KLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVTM 1125
            KLLI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEEKGLISDD+L F ASCYAA+VT+
Sbjct: 739  KLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTL 798

Query: 1124 AALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQVL 945
            +AL E+F+AAR IMGWLG+CAK+I ++N PVRWTTPLGLPVVQPY+KS+RH+I+TSLQVL
Sbjct: 799  SALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVL 858

Query: 944  ALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDVD 765
            ALQREG+LV+VRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGLRFAGVHDSFWTHACDVD
Sbjct: 859  ALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVD 918

Query: 764  RMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            RMN ILR+KFVELYSMPVLE+LLE F+           P RGDFDL++VL+SPYFFN
Sbjct: 919  RMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 975


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score = 1096 bits (2834), Expect = 0.0
 Identities = 527/718 (73%), Positives = 622/718 (86%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QE+RI +FL+K KN ++K+++A+ EE  SKE  +LR+RV  LIK  RV E QKLL++EE 
Sbjct: 292  QEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEET 351

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + WGRDTQAKLG  L+ELL ++AYVQ P++    SPPDVRPAFRH FK   + PGQ   K
Sbjct: 352  KPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTK 411

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            +YG +ECDPLVL GLD++ +HM+IPYVPMLVPPK+WKGY+KGGYLFLPSY+MRTHGSR+Q
Sbjct: 412  RYGVVECDPLVLAGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQ 471

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            Q+A+++V    M+KV+EALDTLG+TKWRVN+++L+V+E++W +GG++AGLV+R +VPIPE
Sbjct: 472  QEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVPIPE 531

Query: 2024 L-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
              LS+D  E+           KINQERHSQRCD ELKLSVAR MKDEEGFYYPHNLDFRG
Sbjct: 532  KPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRG 591

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSD+CRG+LEFA+GRPLGKSGLRWLKIHLANL+ GGVEKLS+D R++F
Sbjct: 592  RAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAF 651

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            VEN++ EI DSA+N +NG+RWWL AEDPFQCLAACINLSEALKSSSPH+VISHLPIHQDG
Sbjct: 652  VENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDG 711

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGR++ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KDP   P ALL
Sbjct: 712  SCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALL 771

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+LI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD+ LF+A+CYAA+VT
Sbjct: 772  AKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVT 831

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            + AL E+F+AAR+IMGWLG+CAK+I  EN PVRWTTPLGLPVVQPY K++RH+I+TSLQV
Sbjct: 832  LTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQV 891

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQREG  VE+RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDV
Sbjct: 892  LALQREGKSVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDV 951

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D MNQILR+KFVELY+MP+LENLLESFQ           PERG+FDLE+VLESPYFFN
Sbjct: 952  DEMNQILRKKFVELYNMPILENLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1009


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score = 1090 bits (2820), Expect = 0.0
 Identities = 525/718 (73%), Positives = 622/718 (86%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QE+RI +FL+K KN ++K+++A+ EE  SKE  +LR+RV  LIK  RV E QKLL++EE 
Sbjct: 295  QEIRIHSFLEKTKNYKRKKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEET 354

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + WGRDTQAKLG  L+ELL ++AYVQ P++    SPPDVRPAFRH FK   + PGQ   K
Sbjct: 355  KPWGRDTQAKLGSRLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTK 414

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            +YG +ECDPLVL GLD++ +HM+IPYVPMLVPPK+WKGY+KGGYLFLPSY+MRTHGSR+Q
Sbjct: 415  RYGVVECDPLVLEGLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQ 474

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            Q+A+++V    M+KV+EALDTLG+TKWRVN+++L+V+E++W +GG++AGLV+R +V IPE
Sbjct: 475  QEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPE 534

Query: 2024 L-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
              LS+D  E+           KINQERHSQRCD ELKLSVAR MKDEEGFYYPHNLDFRG
Sbjct: 535  KPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRG 594

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSD+CRG+LEFA+GRPLGKSGLRWLKIHLANL+ GGVEKLS+D R++F
Sbjct: 595  RAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAF 654

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            VEN++ EI DSA+N +NG+RWWL AEDPFQCLAACINL+EALKSSSPH+VISHLPIHQDG
Sbjct: 655  VENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLAEALKSSSPHSVISHLPIHQDG 714

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGR++ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KD    P ALL
Sbjct: 715  SCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALL 774

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+LI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG I+DD+ LF+A+CYAA+VT
Sbjct: 775  AKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVT 834

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            + AL E+F+AAR+IMGWLG+CAK+I  EN PVRWTTPLGLPVVQPY K++RH+I+TSLQV
Sbjct: 835  LTALGEIFEAARSIMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQV 894

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQREG+LVE+RKQRTAFPPNFVHSLDG+HMMMTA+ACR+AGL FAGVHDSFWTHACDV
Sbjct: 895  LALQREGNLVEIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDV 954

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D MNQILR+KFVELY+MP+LENLLESFQ           PERG+FDLE+VLESPYFFN
Sbjct: 955  DEMNQILRKKFVELYNMPMLENLLESFQTSYPTLSFPSLPERGNFDLEEVLESPYFFN 1012


>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score = 1077 bits (2784), Expect = 0.0
 Identities = 520/718 (72%), Positives = 616/718 (85%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QE++I +FL+K KN +K    ++  E   KE  I R RVK LIKR R+ E  KL+ SE+ 
Sbjct: 274  QEIKIHSFLEKTKNIRKN--ASDLPEDLLKEKEIQRNRVKSLIKRKRLFEAAKLVTSEDS 331

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            +SW +DTQAKLG  L+ELL  +AY+Q P  Q+AD+PPDVRPAFRH FKI   E GQ +VK
Sbjct: 332  KSWSQDTQAKLGSRLIELLIDTAYIQHPTSQSADTPPDVRPAFRHKFKILNNELGQQVVK 391

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            +YG IECDPLVL G+D++ R+MIIPYVPML+PPK WKGYDKGGYLFLPSY+MRTHGSR+Q
Sbjct: 392  RYGVIECDPLVLKGIDRSARYMIIPYVPMLIPPKNWKGYDKGGYLFLPSYVMRTHGSRKQ 451

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDA+R  P +QMQKV+EAL+TLG+TKWR+NR++L VVENLWA+GG++ GLVN ++VP+PE
Sbjct: 452  QDAMRKTPPQQMQKVFEALNTLGHTKWRINRKVLGVVENLWASGGNIGGLVNCDDVPLPE 511

Query: 2024 L-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
              L++D  EI           KIN+ERH+ RCDVELK+SVA+ MKDEEGFYYPHNLDFRG
Sbjct: 512  KPLTEDPAEIDTWKWSVRKAKKINRERHALRCDVELKISVAQKMKDEEGFYYPHNLDFRG 571

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSDLCRG+LEFA GRPLGK+GL WLKIHLAN+Y GGV+KLSY+AR +F
Sbjct: 572  RAYPMHPHLNHLSSDLCRGVLEFASGRPLGKTGLHWLKIHLANVYAGGVDKLSYEARAAF 631

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            VEN++ E+ DSA N +NGNRWWL AEDPFQCLAACI+L+ AL SSSPH+ IS+LPIHQDG
Sbjct: 632  VENHLEEVFDSATNPINGNRWWLSAEDPFQCLAACIDLTGALNSSSPHSFISYLPIHQDG 691

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGRDS EAAAVNLVAG++P+DVYSEIA RV  IM++DS KDP+TDP+A+L
Sbjct: 692  SCNGLQHYAALGRDSKEAAAVNLVAGEEPADVYSEIAVRVREIMEKDSRKDPKTDPHAVL 751

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+L+ QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG+I+DD+LLFSA+CY+A+VT
Sbjct: 752  AKVLVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGVITDDRLLFSAACYSAKVT 811

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            M+AL +LFQAAR IM WLG+CAK+I  EN PVRWTTPLGLPVVQPY KS+RH+IKTSLQV
Sbjct: 812  MSALGQLFQAARGIMDWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQV 871

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQ+EG+ +EV+KQRTAFPPN+VHSLDGTHMMMTA+ACR+AGL+FAGVHDSFWTHACDV
Sbjct: 872  LALQQEGEGIEVKKQRTAFPPNYVHSLDGTHMMMTAVACRDAGLQFAGVHDSFWTHACDV 931

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            ++MNQILR KFVELY+MP+LENLLESFQ           PERGDFDLE+VLESPYFFN
Sbjct: 932  EKMNQILRVKFVELYNMPILENLLESFQTAYPASTFPPLPERGDFDLEEVLESPYFFN 989


>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
            gi|557106040|gb|ESQ46365.1| hypothetical protein
            EUTSA_v10000030mg [Eutrema salsugineum]
          Length = 993

 Score = 1062 bits (2747), Expect = 0.0
 Identities = 515/718 (71%), Positives = 608/718 (84%), Gaps = 1/718 (0%)
 Frame = -2

Query: 2744 QEVRIQNFLKKEKNDQKKEVVAEGEEGSSKEVTILRQRVKRLIKRNRVAEVQKLLRSEEF 2565
            QEVRI NFLK+ + +      A   E   K+  +LR+RV  LI+R R+ +  K+++SE  
Sbjct: 281  QEVRIHNFLKRTRKNN-----AGDSEEELKDKQLLRKRVNSLIRRKRIIDALKVVKSEGI 335

Query: 2564 ESWGRDTQAKLGCCLLELLTQSAYVQPPIDQTADSPPDVRPAFRHIFKIAAREPGQSIVK 2385
            + WGR TQAKLG  LLELL ++AYVQPP+ Q  D+ P+ RPAFRH FK   + PG  +V+
Sbjct: 336  KPWGRATQAKLGSRLLELLIETAYVQPPLTQAGDTIPEFRPAFRHKFKTVTKYPGSKLVR 395

Query: 2384 KYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSRRQ 2205
            +YG IECD L+L GLDK+ +HM+IPYVPMLVPPKRWKGYDKGGYLFLPSY+MRTHGS++Q
Sbjct: 396  RYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQ 455

Query: 2204 QDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILNVVENLWAAGGDVAGLVNRENVPIPE 2025
            QDA+R +  K   +V+EALDTLGNTKWRVNR+IL+VVE LWA GG++AGLVNRE+VPIPE
Sbjct: 456  QDALRDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVPIPE 515

Query: 2024 L-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVELKLSVARNMKDEEGFYYPHNLDFRG 1848
               S+D +EI           KIN+ERHS RCDVELKLSVAR MKDEEGFYYPHNLDFRG
Sbjct: 516  KPSSEDPEEIQSWKWSVRKANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRG 575

Query: 1847 RAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSF 1668
            RAYPMHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+D R++F
Sbjct: 576  RAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHDGRLAF 635

Query: 1667 VENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDG 1488
            VEN++  I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP++VISHLPIHQDG
Sbjct: 636  VENHLDNIMDSAENPIHGQRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDG 695

Query: 1487 SCNGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALL 1308
            SCNGLQHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDPE++P A L
Sbjct: 696  SCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISLRVHEIMKKDSSKDPESNPTAAL 755

Query: 1307 AKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLISDDKLLFSASCYAARVT 1128
            AK+LI QVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG+ISD+++LFSA+CYAA+VT
Sbjct: 756  AKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVISDERMLFSAACYAAKVT 815

Query: 1127 MAALEELFQAARAIMGWLGNCAKIIGQENHPVRWTTPLGLPVVQPYFKSQRHVIKTSLQV 948
            +AAL E+F+AARAIM WLG+CAKII  +NHPVRW TPLGLPVVQPY +S+RH+I+TSLQV
Sbjct: 816  LAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQV 875

Query: 947  LALQREGDLVEVRKQRTAFPPNFVHSLDGTHMMMTAIACRNAGLRFAGVHDSFWTHACDV 768
            LALQREG+ V+VRKQRTAFPPNFVHSLDGTHMMMTA+ACR AGL FAGVHDS+WTHACDV
Sbjct: 876  LALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDV 935

Query: 767  DRMNQILRQKFVELYSMPVLENLLESFQXXXXXXXXXXXPERGDFDLEKVLESPYFFN 594
            D MN+ILR+KFVELY+ P+LE+LL+SFQ           P+RGDFDL++VL+S YFFN
Sbjct: 936  DTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 993