BLASTX nr result
ID: Mentha28_contig00016246
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00016246
(990 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190149.1| RNA binding (RRM/RBD/RNP motifs) family protein... 52 3e-11
ref|XP_007016649.1| RNA binding family protein, putative isoform... 56 6e-11
ref|XP_007016651.1| RNA binding family protein, putative isoform... 56 6e-11
ref|XP_007016650.1| RNA binding family protein, putative isoform... 56 6e-11
ref|XP_006290537.1| hypothetical protein CARUB_v10016620mg, part... 53 2e-10
dbj|BAF00611.1| hypothetical protein [Arabidopsis thaliana] 55 2e-10
ref|XP_002864671.1| hypothetical protein ARALYDRAFT_358235 [Arab... 55 2e-10
dbj|BAA97498.1| general negative transcription regulator-like [A... 55 2e-10
ref|XP_006400876.1| hypothetical protein EUTSA_v10012567mg [Eutr... 54 2e-10
ref|NP_001190578.1| RNA binding (RRM/RBD/RNP motifs) family prot... 55 2e-10
ref|XP_006290536.1| hypothetical protein CARUB_v10016620mg [Caps... 53 2e-10
ref|NP_200825.2| RNA binding (RRM/RBD/RNP motifs) family protein... 55 2e-10
ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267... 55 2e-10
emb|CBI16241.3| unnamed protein product [Vitis vinifera] 55 2e-10
gb|EYU18889.1| hypothetical protein MIMGU_mgv1a000758mg [Mimulus... 54 3e-10
ref|XP_002877425.1| RNA recognition motif-containing protein [Ar... 53 3e-10
gb|EYU35398.1| hypothetical protein MIMGU_mgv1a019569mg, partial... 54 3e-10
ref|XP_006594997.1| PREDICTED: uncharacterized protein YMR317W-l... 54 4e-10
ref|XP_006488200.1| PREDICTED: uncharacterized protein LOC102631... 53 4e-10
ref|XP_006591008.1| PREDICTED: uncharacterized protein LOC100813... 54 4e-10
>ref|NP_190149.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|6996266|emb|CAB75492.1| putative protein
[Arabidopsis thaliana] gi|332644532|gb|AEE78053.1| RNA
binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 989
Score = 52.4 bits (124), Expect(2) = 3e-11
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE +RCIQSVHGF+LDGK L
Sbjct: 162 YITYGKEEEAIRCIQSVHGFILDGKAL 188
Score = 43.1 bits (100), Expect(2) = 3e-11
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ A LYLHE SQEDSFT+D+IISAHTR
Sbjct: 200 AWLRNV-ACNNQDCLYLHEVGSQEDSFTKDEIISAHTR 236
>ref|XP_007016649.1| RNA binding family protein, putative isoform 1 [Theobroma cacao]
gi|508787012|gb|EOY34268.1| RNA binding family protein,
putative isoform 1 [Theobroma cacao]
Length = 1045
Score = 56.2 bits (134), Expect(2) = 6e-11
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE +RCIQSVHGFVLDG+PL
Sbjct: 163 YITYSKEEEAIRCIQSVHGFVLDGRPL 189
Score = 38.5 bits (88), Expect(2) = 6e-11
Identities = 19/24 (79%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+IISA+TR
Sbjct: 214 LYLHEIGSQEDSFTKDEIISAYTR 237
>ref|XP_007016651.1| RNA binding family protein, putative isoform 3 [Theobroma cacao]
gi|590590148|ref|XP_007016652.1| RNA binding family
protein, putative isoform 3 [Theobroma cacao]
gi|508787014|gb|EOY34270.1| RNA binding family protein,
putative isoform 3 [Theobroma cacao]
gi|508787015|gb|EOY34271.1| RNA binding family protein,
putative isoform 3 [Theobroma cacao]
Length = 1005
Score = 56.2 bits (134), Expect(2) = 6e-11
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE +RCIQSVHGFVLDG+PL
Sbjct: 123 YITYSKEEEAIRCIQSVHGFVLDGRPL 149
Score = 38.5 bits (88), Expect(2) = 6e-11
Identities = 19/24 (79%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+IISA+TR
Sbjct: 174 LYLHEIGSQEDSFTKDEIISAYTR 197
>ref|XP_007016650.1| RNA binding family protein, putative isoform 2 [Theobroma cacao]
gi|508787013|gb|EOY34269.1| RNA binding family protein,
putative isoform 2 [Theobroma cacao]
Length = 897
Score = 56.2 bits (134), Expect(2) = 6e-11
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE +RCIQSVHGFVLDG+PL
Sbjct: 163 YITYSKEEEAIRCIQSVHGFVLDGRPL 189
Score = 38.5 bits (88), Expect(2) = 6e-11
Identities = 19/24 (79%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+IISA+TR
Sbjct: 214 LYLHEIGSQEDSFTKDEIISAYTR 237
>ref|XP_006290537.1| hypothetical protein CARUB_v10016620mg, partial [Capsella rubella]
gi|482559244|gb|EOA23435.1| hypothetical protein
CARUB_v10016620mg, partial [Capsella rubella]
Length = 1033
Score = 52.8 bits (125), Expect(2) = 2e-10
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE VRCIQSVHGF+LDGK L
Sbjct: 210 YITYGKEEEAVRCIQSVHGFILDGKSL 236
Score = 40.4 bits (93), Expect(2) = 2e-10
Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ A LYLHE SQEDSFT+D+IISA+TR
Sbjct: 248 AWLRNV-ACNNPDCLYLHEVGSQEDSFTKDEIISAYTR 284
>dbj|BAF00611.1| hypothetical protein [Arabidopsis thaliana]
Length = 1025
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE VRCIQ+VHGF+LDGKPL
Sbjct: 203 YITYGKEEEAVRCIQAVHGFILDGKPL 229
Score = 38.5 bits (88), Expect(2) = 2e-10
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ A LYLHE SQ+DSFT+D+IISA+TR
Sbjct: 241 AWLRNV-ACVNPDCLYLHEVGSQDDSFTKDEIISAYTR 277
>ref|XP_002864671.1| hypothetical protein ARALYDRAFT_358235 [Arabidopsis lyrata subsp.
lyrata] gi|297310506|gb|EFH40930.1| hypothetical protein
ARALYDRAFT_358235 [Arabidopsis lyrata subsp. lyrata]
Length = 1001
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE VRCIQ+VHGF+LDGKPL
Sbjct: 163 YITYGKEEEAVRCIQAVHGFILDGKPL 189
Score = 38.5 bits (88), Expect(2) = 2e-10
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ A LYLHE SQ+DSFT+D+IISA+TR
Sbjct: 201 AWLRNV-ACVNPDCLYLHEVGSQDDSFTKDEIISAYTR 237
>dbj|BAA97498.1| general negative transcription regulator-like [Arabidopsis
thaliana]
Length = 989
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE VRCIQ+VHGF+LDGKPL
Sbjct: 163 YITYGKEEEAVRCIQAVHGFILDGKPL 189
Score = 38.5 bits (88), Expect(2) = 2e-10
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ A LYLHE SQ+DSFT+D+IISA+TR
Sbjct: 201 AWLRNV-ACVNPDCLYLHEVGSQDDSFTKDEIISAYTR 237
>ref|XP_006400876.1| hypothetical protein EUTSA_v10012567mg [Eutrema salsugineum]
gi|557101966|gb|ESQ42329.1| hypothetical protein
EUTSA_v10012567mg [Eutrema salsugineum]
Length = 989
Score = 53.9 bits (128), Expect(2) = 2e-10
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY+KEEE VRCIQ+VHGF LDGKPL
Sbjct: 163 YITYAKEEEAVRCIQAVHGFTLDGKPL 189
Score = 39.3 bits (90), Expect(2) = 2e-10
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ + LYLHE SQEDSFT+D+IISA+TR
Sbjct: 201 AWLRNVACINPD-CLYLHEVGSQEDSFTKDEIISAYTR 237
>ref|NP_001190578.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|332009906|gb|AED97289.1| RNA binding
(RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 987
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE VRCIQ+VHGF+LDGKPL
Sbjct: 163 YITYGKEEEAVRCIQAVHGFILDGKPL 189
Score = 38.5 bits (88), Expect(2) = 2e-10
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ A LYLHE SQ+DSFT+D+IISA+TR
Sbjct: 201 AWLRNV-ACVNPDCLYLHEVGSQDDSFTKDEIISAYTR 237
>ref|XP_006290536.1| hypothetical protein CARUB_v10016620mg [Capsella rubella]
gi|482559243|gb|EOA23434.1| hypothetical protein
CARUB_v10016620mg [Capsella rubella]
Length = 987
Score = 52.8 bits (125), Expect(2) = 2e-10
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE VRCIQSVHGF+LDGK L
Sbjct: 164 YITYGKEEEAVRCIQSVHGFILDGKSL 190
Score = 40.4 bits (93), Expect(2) = 2e-10
Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ A LYLHE SQEDSFT+D+IISA+TR
Sbjct: 202 AWLRNV-ACNNPDCLYLHEVGSQEDSFTKDEIISAYTR 238
>ref|NP_200825.2| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|332009905|gb|AED97288.1| RNA binding
(RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 985
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE VRCIQ+VHGF+LDGKPL
Sbjct: 163 YITYGKEEEAVRCIQAVHGFILDGKPL 189
Score = 38.5 bits (88), Expect(2) = 2e-10
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N+ A LYLHE SQ+DSFT+D+IISA+TR
Sbjct: 201 AWLRNV-ACVNPDCLYLHEVGSQDDSFTKDEIISAYTR 237
>ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267264 [Vitis vinifera]
Length = 1024
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE VRCIQ+VHGFVLDG+PL
Sbjct: 163 YITYSKEEEAVRCIQTVHGFVLDGRPL 189
Score = 37.4 bits (85), Expect(2) = 2e-10
Identities = 18/24 (75%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+IIS++TR
Sbjct: 214 LYLHEIGSQEDSFTKDEIISSYTR 237
>emb|CBI16241.3| unnamed protein product [Vitis vinifera]
Length = 1022
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE VRCIQ+VHGFVLDG+PL
Sbjct: 163 YITYSKEEEAVRCIQTVHGFVLDGRPL 189
Score = 37.4 bits (85), Expect(2) = 2e-10
Identities = 18/24 (75%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+IIS++TR
Sbjct: 214 LYLHEIGSQEDSFTKDEIISSYTR 237
>gb|EYU18889.1| hypothetical protein MIMGU_mgv1a000758mg [Mimulus guttatus]
Length = 992
Score = 54.3 bits (129), Expect(2) = 3e-10
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE VRCIQ VHGFVLDG+PL
Sbjct: 163 YITYSKEEEAVRCIQLVHGFVLDGRPL 189
Score = 38.1 bits (87), Expect(2) = 3e-10
Identities = 18/24 (75%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+I+SA+TR
Sbjct: 214 LYLHEIGSQEDSFTKDEIVSAYTR 237
>ref|XP_002877425.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297323263|gb|EFH53684.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 989
Score = 52.8 bits (125), Expect(2) = 3e-10
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITY KEEE VRCIQSVHGF+LDGK L
Sbjct: 162 YITYGKEEEAVRCIQSVHGFILDGKAL 188
Score = 39.7 bits (91), Expect(2) = 3e-10
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = -1
Query: 129 SWMVNL*ALQQSRFLYLHET-SQEDSFTRDDIISAHTR 19
+W+ N A LYLHE SQEDSFT+D+IISA+TR
Sbjct: 200 AWLRNA-ACNNPDCLYLHEVGSQEDSFTKDEIISAYTR 236
>gb|EYU35398.1| hypothetical protein MIMGU_mgv1a019569mg, partial [Mimulus
guttatus]
Length = 283
Score = 54.3 bits (129), Expect(2) = 3e-10
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE VRCIQ VHGFVLDG+PL
Sbjct: 163 YITYSKEEEAVRCIQLVHGFVLDGRPL 189
Score = 38.1 bits (87), Expect(2) = 3e-10
Identities = 18/24 (75%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+I+SA+TR
Sbjct: 214 LYLHEIGSQEDSFTKDEIVSAYTR 237
>ref|XP_006594997.1| PREDICTED: uncharacterized protein YMR317W-like isoform X2 [Glycine
max]
Length = 1039
Score = 53.5 bits (127), Expect(2) = 4e-10
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE +RCIQ+VHGFVL+G+PL
Sbjct: 199 YITYSKEEEAIRCIQNVHGFVLEGRPL 225
Score = 38.5 bits (88), Expect(2) = 4e-10
Identities = 19/24 (79%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+IISA+TR
Sbjct: 250 LYLHEIGSQEDSFTKDEIISAYTR 273
>ref|XP_006488200.1| PREDICTED: uncharacterized protein LOC102631197 isoform X1 [Citrus
sinensis] gi|568870001|ref|XP_006488201.1| PREDICTED:
uncharacterized protein LOC102631197 isoform X2 [Citrus
sinensis]
Length = 1038
Score = 53.1 bits (126), Expect(2) = 4e-10
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE VRCIQSVHGFVL+GK L
Sbjct: 164 YITYSKEEEAVRCIQSVHGFVLEGKSL 190
Score = 38.9 bits (89), Expect(2) = 4e-10
Identities = 19/24 (79%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+IISA+TR
Sbjct: 215 LYLHEVGSQEDSFTKDEIISAYTR 238
>ref|XP_006591008.1| PREDICTED: uncharacterized protein LOC100813427 isoform X2 [Glycine
max]
Length = 1025
Score = 53.5 bits (127), Expect(2) = 4e-10
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = -3
Query: 190 YITYSKEEEVVRCIQSVHGFVLDGKPL 110
YITYSKEEE +RCIQ+VHGFVL+G+PL
Sbjct: 163 YITYSKEEEAIRCIQNVHGFVLEGRPL 189
Score = 38.5 bits (88), Expect(2) = 4e-10
Identities = 19/24 (79%), Positives = 22/24 (91%), Gaps = 1/24 (4%)
Frame = -1
Query: 87 LYLHET-SQEDSFTRDDIISAHTR 19
LYLHE SQEDSFT+D+IISA+TR
Sbjct: 214 LYLHEIGSQEDSFTKDEIISAYTR 237