BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00014479
         (911 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...   366   6e-99
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   326   9e-87
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   325   1e-86
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   319   1e-84
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              282   1e-73
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   282   1e-73
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   271   2e-70
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   265   2e-68
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   265   2e-68
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   264   4e-68
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   261   2e-67
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   261   2e-67
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   261   2e-67
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   261   2e-67
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   259   8e-67
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   259   1e-66
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   258   3e-66
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   257   5e-66
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   254   3e-65
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   253   6e-65

>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score =  366 bits (940), Expect = 6e-99
 Identities = 182/280 (65%), Positives = 227/280 (81%), Gaps = 19/280 (6%)
 Frame = -2

Query: 910  AEHSGKEDETRDEQNANE----------GSTRSKKT---------DAKIRRAVKHVFERS 788
            +EH+  +DE  + QN +E          GS++ K +           KIRRA   V + +
Sbjct: 1441 SEHTDDKDEASNVQNEDEAISEGTKSSVGSSKGKTSFDKSSVELKGKKIRRAFYMVVKGT 1500

Query: 787  SFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRR 608
             FEVHF+F  EPH+L+AQ+AQKT++KV++++SG++SQC++V YDPDEKTVIW+++ KP+R
Sbjct: 1501 KFEVHFEFHEEPHMLIAQLAQKTSKKVYIRKSGKVSQCKMVSYDPDEKTVIWDNSKKPKR 1560

Query: 607  GENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATL 428
            GE+K +   +D  YWA+KASG+DFKSFW+MH+DLDLSRLYSNN+HA+L TYGVEAARAT+
Sbjct: 1561 GESKSEE--EDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNIHAMLTTYGVEAARATI 1618

Query: 427  IREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKF 248
            IREVK VFDIYGVKIDYRHLSLIAD+MTHTG Y PMSR GSISESLSPFLKMSFETASKF
Sbjct: 1619 IREVKHVFDIYGVKIDYRHLSLIADHMTHTGSYLPMSRHGSISESLSPFLKMSFETASKF 1678

Query: 247  IVEAASMGLADELETPSSRICLGLPVKVGTGCFDLMQKLE 128
            IVEAAS GL D+L+TPSSRICLGLPVK+GTG FD+MQ+L+
Sbjct: 1679 IVEAASHGLTDKLDTPSSRICLGLPVKMGTGSFDVMQQLD 1718


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  326 bits (835), Expect = 9e-87
 Identities = 160/259 (61%), Positives = 206/259 (79%), Gaps = 7/259 (2%)
 Frame = -2

Query: 883  TRDEQNANEGSTRSKKTDAKIRRAVKH----VF---ERSSFEVHFKFTTEPHVLLAQIAQ 725
            T+  ++  +  T  K+   K RR+ K     VF   E   FEVHF+F  EPH+LLAQ+AQ
Sbjct: 1422 TKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPHILLAQVAQ 1481

Query: 724  KTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASG 545
            KTA+KV++K SG++ QCR+V+Y+  E TV+W++       + K Q+   D+ YWA+KA+G
Sbjct: 1482 KTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEY------QTKQQSQDSDSAYWALKAAG 1535

Query: 544  IDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLS 365
            +DF +FW+M +DLD++R+Y+NN+ A+LNTYGVEAARA+++REVK VF IYGV+ID+RHLS
Sbjct: 1536 VDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLS 1595

Query: 364  LIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRIC 185
            LIAD+MTHTGGY+PMSR GSISESLSPFLKMSFETASKFIVEAA+ GL D LETPSSRIC
Sbjct: 1596 LIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRIC 1655

Query: 184  LGLPVKVGTGCFDLMQKLE 128
            LGLPVK+GTGCFD+MQKL+
Sbjct: 1656 LGLPVKMGTGCFDIMQKLD 1674


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  325 bits (834), Expect = 1e-86
 Identities = 158/272 (58%), Positives = 208/272 (76%), Gaps = 12/272 (4%)
 Frame = -2

Query: 907  EHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSS------------FEVHFKF 764
            EH+ K   T ++ +  + S    KT  K ++  +   ++ S            FEVHF+F
Sbjct: 1411 EHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFVDVEGLHFEVHFRF 1470

Query: 763  TTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTG 584
              EPH+LLAQ+AQKTA+KV++K SG++ QCR+V+Y+  E TV+W++       + K Q  
Sbjct: 1471 VNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDEN------QTKQQRQ 1524

Query: 583  ADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVF 404
              D+ YWA+KA+G+DF +FW+M +DLD++R+Y+NN+ A+LNTYGVEAARA+++REVK VF
Sbjct: 1525 DSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVF 1584

Query: 403  DIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMG 224
             IYGV+ID+RHLSLIAD+MTHTGGY+PMSR GSISESLSPFLKMSFETASKFIVEAA+ G
Sbjct: 1585 GIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHG 1644

Query: 223  LADELETPSSRICLGLPVKVGTGCFDLMQKLE 128
            L D LETPSSRICLGLPVK+GTGCFD+MQ+L+
Sbjct: 1645 LTDNLETPSSRICLGLPVKMGTGCFDIMQELD 1676


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  319 bits (817), Expect = 1e-84
 Identities = 158/234 (67%), Positives = 190/234 (81%), Gaps = 2/234 (0%)
 Frame = -2

Query: 835  TDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSG-EMSQCRLVQY 659
            T  +  RA+    E  S EVHFKFT+EPHVLLAQ+ QKTA+KV++K++G +++QC+LVQY
Sbjct: 1393 TGKRENRAIYMEIEGLSLEVHFKFTSEPHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQY 1452

Query: 658  DPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDLSRLYSNN 479
            DPDEKTVIW+D  K  +     +   DDA YWA+KASG D +SFW+M + LDL+RLY NN
Sbjct: 1453 DPDEKTVIWDDDKKKEKATKNGRKADDDAAYWAVKASGSDVESFWEMSDYLDLNRLYCNN 1512

Query: 478  VHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSIS 299
            +H++L TYGVEAA AT+IRE+K VFDIYGVKIDYRHLSLI D+M H GGYRPMSR GSI 
Sbjct: 1513 IHSMLKTYGVEAASATIIREMKNVFDIYGVKIDYRHLSLIGDHMAHAGGYRPMSRHGSIP 1572

Query: 298  ESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGT-GCFDLM 140
            +S+SPFLKMSFETASKFIVEAA  GL D+LE+PSSRICLGLPV+VGT G FDLM
Sbjct: 1573 DSVSPFLKMSFETASKFIVEAAIYGLRDDLESPSSRICLGLPVRVGTGGPFDLM 1626


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  282 bits (722), Expect = 1e-73
 Identities = 142/267 (53%), Positives = 196/267 (73%), Gaps = 11/267 (4%)
 Frame = -2

Query: 895  KEDETRDEQNANEGSTRSKKTDAKIR---RAVKHVFERSS--------FEVHFKFTTEPH 749
            K+++++    +     +  KT+AK +   RA+K  F+R+         FEVHF+FT EPH
Sbjct: 1407 KDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPH 1466

Query: 748  VLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDAL 569
            +LLAQIAQK A KV+++ SG++  C+++  + D+      D   P++ EN P  G +   
Sbjct: 1467 ILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRD---PKKRENIP--GEEKKK 1521

Query: 568  YWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGV 389
              A++ +G+DF +FW M ++LD+  +YSNNVHA+LNT+GVEAARAT+I+EV  VF+ YGV
Sbjct: 1522 LPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGV 1581

Query: 388  KIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADEL 209
            K++ RHLSLIAD+MTH+GGYRPM+R G I+ES+SPF KM+FETASKFIVEAAS G+ D L
Sbjct: 1582 KVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNL 1641

Query: 208  ETPSSRICLGLPVKVGTGCFDLMQKLE 128
            E+ S+RICLGLPVK+GTGCFDLMQK+E
Sbjct: 1642 ESASARICLGLPVKMGTGCFDLMQKIE 1668


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  282 bits (722), Expect = 1e-73
 Identities = 142/267 (53%), Positives = 196/267 (73%), Gaps = 11/267 (4%)
 Frame = -2

Query: 895  KEDETRDEQNANEGSTRSKKTDAKIR---RAVKHVFERSS--------FEVHFKFTTEPH 749
            K+++++    +     +  KT+AK +   RA+K  F+R+         FEVHF+FT EPH
Sbjct: 1478 KDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPH 1537

Query: 748  VLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDAL 569
            +LLAQIAQK A KV+++ SG++  C+++  + D+      D   P++ EN P  G +   
Sbjct: 1538 ILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRD---PKKRENIP--GEEKKK 1592

Query: 568  YWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGV 389
              A++ +G+DF +FW M ++LD+  +YSNNVHA+LNT+GVEAARAT+I+EV  VF+ YGV
Sbjct: 1593 LPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGV 1652

Query: 388  KIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADEL 209
            K++ RHLSLIAD+MTH+GGYRPM+R G I+ES+SPF KM+FETASKFIVEAAS G+ D L
Sbjct: 1653 KVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNL 1712

Query: 208  ETPSSRICLGLPVKVGTGCFDLMQKLE 128
            E+ S+RICLGLPVK+GTGCFDLMQK+E
Sbjct: 1713 ESASARICLGLPVKMGTGCFDLMQKIE 1739


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  271 bits (694), Expect = 2e-70
 Identities = 142/264 (53%), Positives = 179/264 (67%), Gaps = 8/264 (3%)
 Frame = -2

Query: 895  KEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERS--------SFEVHFKFTTEPHVLL 740
            K+       +  +   + KK  AK +  +   F+R+         FEVHFKFT EPH+LL
Sbjct: 1427 KKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILL 1486

Query: 739  AQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWA 560
            A+IAQKTA+KV+++  G++ QCR+   D  E  VI+       R + KP          A
Sbjct: 1487 AEIAQKTAKKVYIQNPGKIEQCRVT--DCKESQVIYYGKDPKERVDLKPDVKEKVP---A 1541

Query: 559  MKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKID 380
            + A+G+DF +FW M + LD+  +YSNN+HA+L TYGVEAAR T+IRE+  VF  YG+ + 
Sbjct: 1542 LHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVS 1601

Query: 379  YRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETP 200
             RHLSLIAD+MTHTGGYRPMSR G I+ES+SPF KMSFETASKFIVEAA  G  D LETP
Sbjct: 1602 NRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETP 1661

Query: 199  SSRICLGLPVKVGTGCFDLMQKLE 128
            S+RICLGLPVK+GTG FDLMQKLE
Sbjct: 1662 SARICLGLPVKMGTGSFDLMQKLE 1685


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  265 bits (677), Expect = 2e-68
 Identities = 137/256 (53%), Positives = 180/256 (70%)
 Frame = -2

Query: 895  KEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTA 716
            K  ET  E+   +     K+TD  I    K     + FEVHFKFT EPH LL+QI Q+ A
Sbjct: 1405 KTTETSKEKKKVKSELVRKETDRSIFVEAKE----NHFEVHFKFTNEPHTLLSQIVQRAA 1460

Query: 715  QKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGIDF 536
            QKV ++RSG++ QC+  Q    E  VI++      R   KP+   +     A++ SG+DF
Sbjct: 1461 QKVSIQRSGKIIQCQ--QITCKEGQVIYHGNNLKERKNLKPE---EKEKIPALQTSGVDF 1515

Query: 535  KSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIA 356
            K+ W+M ++LD+  +YSN++HA+L TYGVEAARAT+IRE++ +F  YG+ ++ RHLSL+A
Sbjct: 1516 KTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVA 1575

Query: 355  DYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGL 176
            DYMTH+GGYRPMSR G IS+S+SPF +M+FETA KFIV+AA  G  D LETPSSRICLGL
Sbjct: 1576 DYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGL 1635

Query: 175  PVKVGTGCFDLMQKLE 128
            PVK+GTG FDLMQK+E
Sbjct: 1636 PVKMGTGSFDLMQKIE 1651


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  265 bits (677), Expect = 2e-68
 Identities = 137/256 (53%), Positives = 180/256 (70%)
 Frame = -2

Query: 895  KEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTA 716
            K  ET  E+   +     K+TD  I    K     + FEVHFKFT EPH LL+QI Q+ A
Sbjct: 1403 KTTETSKEKKKVKSELVRKETDRSIFVEAKE----NHFEVHFKFTNEPHTLLSQIVQRAA 1458

Query: 715  QKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGIDF 536
            QKV ++RSG++ QC+  Q    E  VI++      R   KP+   +     A++ SG+DF
Sbjct: 1459 QKVSIQRSGKIIQCQ--QITCKEGQVIYHGNNLKERKNLKPE---EKEKIPALQTSGVDF 1513

Query: 535  KSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIA 356
            K+ W+M ++LD+  +YSN++HA+L TYGVEAARAT+IRE++ +F  YG+ ++ RHLSL+A
Sbjct: 1514 KTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVA 1573

Query: 355  DYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGL 176
            DYMTH+GGYRPMSR G IS+S+SPF +M+FETA KFIV+AA  G  D LETPSSRICLGL
Sbjct: 1574 DYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGL 1633

Query: 175  PVKVGTGCFDLMQKLE 128
            PVK+GTG FDLMQK+E
Sbjct: 1634 PVKMGTGSFDLMQKIE 1649


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1673

 Score =  264 bits (674), Expect = 4e-68
 Identities = 137/267 (51%), Positives = 183/267 (68%), Gaps = 10/267 (3%)
 Frame = -2

Query: 898  GKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSF--------EVHFKFTTEPHVL 743
            GK+ ++RD+          KKT AK+   V+  ++R++F        E+HFKFT EPH+L
Sbjct: 1419 GKKTKSRDKIK--------KKTSAKL---VRKEYDRATFVSAKGFHFEIHFKFTNEPHIL 1467

Query: 742  LAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVI--WNDTMKPRRGENKPQTGADDAL 569
            L QIAQKTA+ V++K SG +  C+ +    +E  V   WND      GE  P    ++  
Sbjct: 1468 LDQIAQKTARNVYVKSSGNILDCQDIDIYGNEDQVFCCWNDPRNKLSGEKNPSE--EEKK 1525

Query: 568  YWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGV 389
              A++ +G+DF + W + +DLD++ +YSNN+HA+LNTYGVEAAR T+I+E+  VF +YG+
Sbjct: 1526 MRALQTAGVDFATLWKLQDDLDVNYIYSNNIHAMLNTYGVEAARETIIKEISNVFKVYGI 1585

Query: 388  KIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADEL 209
             ++ RHL LIADYMT +G YRPM+R G I+ES SP  KMSFETASKFI EAA  G  D+L
Sbjct: 1586 SVNIRHLLLIADYMTRSGSYRPMNRFGGIAESTSPMNKMSFETASKFIQEAAYHGEKDDL 1645

Query: 208  ETPSSRICLGLPVKVGTGCFDLMQKLE 128
            ETPS+RICLGLPVKVGTGCFDLM K+E
Sbjct: 1646 ETPSARICLGLPVKVGTGCFDLMHKME 1672


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  261 bits (668), Expect = 2e-67
 Identities = 135/258 (52%), Positives = 179/258 (69%), Gaps = 5/258 (1%)
 Frame = -2

Query: 886  ETRDEQNANEGSTRSKKTDAKI-----RRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQK 722
            ++R+E+  +E   + KK  AK       RA+ +      FEVHFK   EPH+LLAQIA+K
Sbjct: 1148 KSREEKTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEK 1205

Query: 721  TAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGI 542
            TA+KV+++  G++ QCR+     ++      D  K +   +K +  A       +  +G+
Sbjct: 1206 TAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQA-------LHTTGV 1258

Query: 541  DFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSL 362
            DF +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+L
Sbjct: 1259 DFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTL 1318

Query: 361  IADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICL 182
            IAD+MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSRICL
Sbjct: 1319 IADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICL 1378

Query: 181  GLPVKVGTGCFDLMQKLE 128
            GLPVK+GTG FDLMQK+E
Sbjct: 1379 GLPVKMGTGSFDLMQKVE 1396


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  261 bits (668), Expect = 2e-67
 Identities = 135/258 (52%), Positives = 179/258 (69%), Gaps = 5/258 (1%)
 Frame = -2

Query: 886  ETRDEQNANEGSTRSKKTDAKI-----RRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQK 722
            ++R+E+  +E   + KK  AK       RA+ +      FEVHFK   EPH+LLAQIA+K
Sbjct: 1151 KSREEKTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEK 1208

Query: 721  TAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGI 542
            TA+KV+++  G++ QCR+     ++      D  K +   +K +  A       +  +G+
Sbjct: 1209 TAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQA-------LHTTGV 1261

Query: 541  DFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSL 362
            DF +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+L
Sbjct: 1262 DFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTL 1321

Query: 361  IADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICL 182
            IAD+MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSRICL
Sbjct: 1322 IADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICL 1381

Query: 181  GLPVKVGTGCFDLMQKLE 128
            GLPVK+GTG FDLMQK+E
Sbjct: 1382 GLPVKMGTGSFDLMQKVE 1399


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  261 bits (668), Expect = 2e-67
 Identities = 135/258 (52%), Positives = 179/258 (69%), Gaps = 5/258 (1%)
 Frame = -2

Query: 886  ETRDEQNANEGSTRSKKTDAKI-----RRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQK 722
            ++R+E+  +E   + KK  AK       RA+ +      FEVHFK   EPH+LLAQIA+K
Sbjct: 1440 KSREEKTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEK 1497

Query: 721  TAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGI 542
            TA+KV+++  G++ QCR+     ++      D  K +   +K +  A       +  +G+
Sbjct: 1498 TAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQA-------LHTTGV 1550

Query: 541  DFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSL 362
            DF +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+L
Sbjct: 1551 DFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTL 1610

Query: 361  IADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICL 182
            IAD+MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSRICL
Sbjct: 1611 IADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICL 1670

Query: 181  GLPVKVGTGCFDLMQKLE 128
            GLPVK+GTG FDLMQK+E
Sbjct: 1671 GLPVKMGTGSFDLMQKVE 1688


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  261 bits (668), Expect = 2e-67
 Identities = 135/258 (52%), Positives = 179/258 (69%), Gaps = 5/258 (1%)
 Frame = -2

Query: 886  ETRDEQNANEGSTRSKKTDAKI-----RRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQK 722
            ++R+E+  +E   + KK  AK       RA+ +      FEVHFK   EPH+LLAQIA+K
Sbjct: 1416 KSREEKTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEK 1473

Query: 721  TAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGI 542
            TA+KV+++  G++ QCR+     ++      D  K +   +K +  A       +  +G+
Sbjct: 1474 TAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQA-------LHTTGV 1526

Query: 541  DFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSL 362
            DF +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ RHL+L
Sbjct: 1527 DFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTL 1586

Query: 361  IADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICL 182
            IAD+MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSSRICL
Sbjct: 1587 IADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICL 1646

Query: 181  GLPVKVGTGCFDLMQKLE 128
            GLPVK+GTG FDLMQK+E
Sbjct: 1647 GLPVKMGTGSFDLMQKVE 1664


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  259 bits (663), Expect = 8e-67
 Identities = 134/244 (54%), Positives = 178/244 (72%)
 Frame = -2

Query: 859  EGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMS 680
            E +++S+    K  R V   FE+  FE+HFKFT EPH+LLAQIAQKTA+KV ++  G++ 
Sbjct: 1411 EENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTGEPHILLAQIAQKTAEKVCIQNFGKVG 1470

Query: 679  QCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGIDFKSFWDMHEDLDL 500
            QC+ +     E  VI+      +R E  P +  +     A++ SGI FKSFW+M +DL++
Sbjct: 1471 QCKAITCK--ESGVIYYGEDDSKR-EEIPSSVKEKIP--ALQTSGIHFKSFWEMQDDLNV 1525

Query: 499  SRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPM 320
              +YSNNVHA+L+TYGVEAA+ T+IREV+ VF  YG+ ++ RHL LIAD+MTH+G YRPM
Sbjct: 1526 RYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGCYRPM 1585

Query: 319  SRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGCFDLM 140
            SR GSI++S SPFLK+ FETAS FIVEAA  G  D L++PS+RICLGLPVK+GTGC +L+
Sbjct: 1586 SRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKMGTGCHELI 1645

Query: 139  QKLE 128
            QKLE
Sbjct: 1646 QKLE 1649


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  259 bits (662), Expect = 1e-66
 Identities = 132/260 (50%), Positives = 180/260 (69%)
 Frame = -2

Query: 907  EHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQIA 728
            E   K     ++QN      +S+ T  K  RA+    +   FE+HF+FT EPH+LL QIA
Sbjct: 1396 EKPSKSKTIDEKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIA 1455

Query: 727  QKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKAS 548
            Q+TA+KV ++  G++ +C+ +     E  VI+      +R E    + ++     A++ S
Sbjct: 1456 QRTAKKVCIQNFGKVGECKAITCK--ESGVIYYGKDGRKRIEI---SASEKEQIPALQTS 1510

Query: 547  GIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHL 368
            G+ FK+FW++ +DLD+  +YSNNVHA+LN YGVEAAR T+IREV+ VF  YG+ ++ RHL
Sbjct: 1511 GVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHL 1570

Query: 367  SLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRI 188
            +LIAD+MTHTG YRPM+R+GSI++S SPF+KM FETA  FIVEAA  G  D LETPS+RI
Sbjct: 1571 TLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARI 1630

Query: 187  CLGLPVKVGTGCFDLMQKLE 128
            CLGLPVK+GTGC DL+QKLE
Sbjct: 1631 CLGLPVKMGTGCHDLIQKLE 1650


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  258 bits (658), Expect = 3e-66
 Identities = 134/264 (50%), Positives = 181/264 (68%), Gaps = 3/264 (1%)
 Frame = -2

Query: 910  AEHSGKEDETRD-EQNANEGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFT-TEPHVLLA 737
            A+   KE +T+   Q   +   R++    +  RA+    +   FEVHF+F   EPH+LL+
Sbjct: 1349 AKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKGFHFEVHFRFADNEPHILLS 1408

Query: 736  QIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYW-A 560
            QIAQKTAQKV+++RSG+++ C+ +  D ++      D       ENK    + +     A
Sbjct: 1409 QIAQKTAQKVYIQRSGKVADCKQITCDENQVLCFGKDP------ENKQSFSSKEKKEMPA 1462

Query: 559  MKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKID 380
            ++ +GIDF +FW + + LD+  +YSNN+HA+LNTYGVEAAR T+IRE+  VF  YG+ ++
Sbjct: 1463 LQTTGIDFGTFWQLQDVLDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSYGISVN 1522

Query: 379  YRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETP 200
             RHL+LIAD+MTH GGYRP++R G I ES+SPF KM+FETASKFIVEAA  G  D LETP
Sbjct: 1523 IRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVDRLETP 1582

Query: 199  SSRICLGLPVKVGTGCFDLMQKLE 128
            S+RICLGLPV VGTGCFDLM K+E
Sbjct: 1583 SARICLGLPVNVGTGCFDLMHKME 1606


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  257 bits (656), Expect = 5e-66
 Identities = 139/267 (52%), Positives = 180/267 (67%), Gaps = 12/267 (4%)
 Frame = -2

Query: 892  EDETRDEQNANEGSTRSKKTDAKIRRA----VKHVFERS--------SFEVHFKFTTEPH 749
            E  ++ E ++   ST  KK  AK ++     VK  F+RS         FE+H KFT EPH
Sbjct: 870  ESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFTNEPH 929

Query: 748  VLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDAL 569
            +LLA+IAQKTA+KV ++  G++ +C++   D  E  VI+      RR + +P    +   
Sbjct: 930  ILLAEIAQKTAKKVCIQNPGKVQRCQVT--DCKENQVIYYGKDPKRRIDIEP---GEKQK 984

Query: 568  YWAMKASGIDFKSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGV 389
              A+   G+DF +FW M + LD+  +YSN++H +L  YGVEAAR T+IRE+K VF+ YG+
Sbjct: 985  IPALHTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGI 1044

Query: 388  KIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADEL 209
             ++ RHLSLIADYMTHTG YRPMSR G ISES+SP  KMSFETASKFIVEAA  G  D L
Sbjct: 1045 SVNTRHLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVEAALHGEVDNL 1104

Query: 208  ETPSSRICLGLPVKVGTGCFDLMQKLE 128
            E PS+R+CLGLPVK+GTG FDLMQKLE
Sbjct: 1105 EAPSARVCLGLPVKMGTGSFDLMQKLE 1131


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  254 bits (649), Expect = 3e-65
 Identities = 134/248 (54%), Positives = 178/248 (71%), Gaps = 4/248 (1%)
 Frame = -2

Query: 859  EGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQ----IAQKTAQKVFLKRS 692
            E +++S+    K  R V   FE+  FE+HFKFT EPH+LLAQ    IAQKTA+KV ++  
Sbjct: 1417 EENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTDEPHILLAQLLSTIAQKTAEKVCIQNF 1476

Query: 691  GEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGIDFKSFWDMHE 512
            G++ QC+ +     E  VI+      +R E  P +  +     A++ SGI FKSFW+M +
Sbjct: 1477 GKVGQCKAITCK--ESGVIYYGEDDSKR-EEIPSSVKEKIP--ALQTSGIHFKSFWEMQD 1531

Query: 511  DLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGG 332
            DL++  +YSNNVHA+L+TYGVEAA+ T+IREV+ VF  YG+ ++ RHL LIAD+MTH+G 
Sbjct: 1532 DLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGC 1591

Query: 331  YRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKVGTGC 152
            YRPMSR GSI++S SPFLK+ FETAS FIVEAA  G  D L++PS+RICLGLPVK+GTGC
Sbjct: 1592 YRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKMGTGC 1651

Query: 151  FDLMQKLE 128
             +L+QKLE
Sbjct: 1652 HELIQKLE 1659


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  253 bits (647), Expect = 6e-65
 Identities = 129/256 (50%), Positives = 175/256 (68%)
 Frame = -2

Query: 895  KEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTA 716
            K  + + +  +     R+K       RA+        FE HFKF  EP++LLAQIA+  A
Sbjct: 1464 KSSKKKSKSKSKRKKARAKLVKKDTDRAIYVAARGMHFEAHFKFINEPNILLAQIARHVA 1523

Query: 715  QKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPRRGENKPQTGADDALYWAMKASGIDF 536
            +KV+++ SG++ QC++      E  VI+       R + KP+   +     A+  +G+DF
Sbjct: 1524 KKVYIQSSGKIDQCQVTNCK--ESQVIYYGKDPKTREDIKPE---EKEKVQALHTTGVDF 1578

Query: 535  KSFWDMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIA 356
             +FW + + +D+  +YSNN+ A+L TYGVEAAR T+IRE+K VF  YG+ ++ RHLSLIA
Sbjct: 1579 HAFWRLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHLSLIA 1638

Query: 355  DYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGL 176
            D+MTH+GGYRPMSR G I+ES+SPF KM+FETASKFIVEAAS G  D+L+TPS+RICLGL
Sbjct: 1639 DFMTHSGGYRPMSRLGGIAESVSPFSKMTFETASKFIVEAASYGQVDKLDTPSARICLGL 1698

Query: 175  PVKVGTGCFDLMQKLE 128
            PVK+GTG FDLMQKLE
Sbjct: 1699 PVKMGTGSFDLMQKLE 1714