BLASTX nr result
ID: Mentha28_contig00014028
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha28_contig00014028 (432 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU29148.1| hypothetical protein MIMGU_mgv1a001099mg [Mimulus... 77 2e-12 ref|XP_005047953.1| PREDICTED: U1 small nuclear ribonucleoprotei... 56 4e-06 >gb|EYU29148.1| hypothetical protein MIMGU_mgv1a001099mg [Mimulus guttatus] gi|604317073|gb|EYU29149.1| hypothetical protein MIMGU_mgv1a001099mg [Mimulus guttatus] Length = 889 Score = 77.0 bits (188), Expect = 2e-12 Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 2/74 (2%) Frame = -3 Query: 421 DRQDKIGDRYGQGSDSDSDEAPKRGRERLDGDKDDLRSGRGRQDRNSKRVDKY--KTNDS 248 DR DK+G RYGQ S+SDSDEA K+ E+ D D+ DL +G GR+++ Y K NDS Sbjct: 507 DRHDKVGGRYGQESESDSDEATKKKTEQRDRDERDLNAGDGRKNQTHDSGKDYNRKRNDS 566 Query: 247 FERNRGNDRSQDRV 206 ERNR ND+++DRV Sbjct: 567 IERNRDNDKTRDRV 580 Score = 73.9 bits (180), Expect = 2e-11 Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 2/142 (1%) Frame = -3 Query: 421 DRQDKIGDRYGQGSDSDSDEAPKRGRERLDGDKDDLRSGRGRQDRNSKRVDKYKTNDSFE 242 ++++++ RYGQ S+SDSDEA K+ ER D + D + +R KT + Sbjct: 430 EKREEVVGRYGQESESDSDEANKKKTERHDRYEYDASRYSDVEFEEDERTRSKKTTQHHQ 489 Query: 241 RNRGNDRSQDRVXXXXXXXXXXXEVINGQGSDSDSEEVPKKGREHCDRDKDDLSSGRGR- 65 R D S D GQ S+SDS+E KK E DRD+ DL++G GR Sbjct: 490 TRRPQDPSADYRRKDRSDRHDKVGGRYGQESESDSDEATKKKTEQRDRDERDLNAGDGRK 549 Query: 64 -QDRNSMEDDRYKASDSFERSR 2 Q +S +D K +DS ER+R Sbjct: 550 NQTHDSGKDYNRKRNDSIERNR 571 >ref|XP_005047953.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Ficedula albicollis] Length = 328 Score = 56.2 bits (134), Expect = 4e-06 Identities = 41/139 (29%), Positives = 59/139 (42%) Frame = -3 Query: 421 DRQDKIGDRYGQGSDSDSDEAPKRGRERLDGDKDDLRSGRGRQDRNSKRVDKYKTNDSFE 242 DR D+ DR G D R R+R D D+D +GR R DR+ R D+ + Sbjct: 125 DRADRDRDRAETGRDRAD-----RDRDRADRDRDRAETGRDRADRDRDRADRDRDRAETG 179 Query: 241 RNRGNDRSQDRVXXXXXXXXXXXEVINGQGSDSDSEEVPKKGREHCDRDKDDLSSGRGRQ 62 R+R DR +DR G D + + R+ DRD+D R R Sbjct: 180 RDRA-DRDRDRADRDRDRAE--------TGRDRADRDRDRADRDRADRDRDRAERDRDRA 230 Query: 61 DRNSMEDDRYKASDSFERS 5 DR+ + DR +A +R+ Sbjct: 231 DRDRADRDRDRAETGRDRA 249