BLASTX nr result
ID: Mentha28_contig00013218
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha28_contig00013218 (3808 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus... 2251 0.0 ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2212 0.0 ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2212 0.0 ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2195 0.0 ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A... 2174 0.0 gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Moru... 2153 0.0 ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 2153 0.0 ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 2148 0.0 ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 2145 0.0 ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2145 0.0 ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su... 2143 0.0 ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su... 2143 0.0 ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su... 2143 0.0 ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su... 2143 0.0 ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr... 2143 0.0 ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 2142 0.0 ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 2139 0.0 ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II su... 2137 0.0 ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su... 2136 0.0 ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su... 2134 0.0 >gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus] Length = 1842 Score = 2251 bits (5834), Expect = 0.0 Identities = 1120/1179 (94%), Positives = 1151/1179 (97%), Gaps = 2/1179 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INLLRYSAWHQE EKGFITPGDTQVRIEKGELL+GTLCKK LG+S+GSLIHVIWEEVGPD Sbjct: 599 INLLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIAD TM KI+ETI+ AKNEV ELIRAAQEK Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 QLE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 QLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 QPLESLKLK+ DFNDMYKYEID NWNPNYMLPEAVEDLKTIREIRSVFDAEV KLE DR Sbjct: 899 QPLESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTF+VDFRRPSDMHPMEIVEAVDKLQERLKV Sbjct: 959 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 VVGDDYLS EAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VVGDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+ Sbjct: 1079 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK VSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE Sbjct: 1139 LKPDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIR Sbjct: 1199 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMN++APKGE+ DES+EDDVFLKKIEGNMLTEMALRGIPDINKVFIKN K+NKFDEN+GF Sbjct: 1259 IMNEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 KAENEWMLDTEGVNLLAV+CHE+VD RRTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1319 KAENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AET Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAET 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSP-M 3419 D LRGVTENIMLGQLAPIGTGDCAL +NE+MLKQAIEIPLPSYMEGGLEFGMTPGRSP Sbjct: 1439 DCLRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHS 1498 Query: 3420 GTPYHDGMMSPNYML-SPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSPNY+L SPNLRLSPV+DAQFSPYVGG+AF Sbjct: 1499 GTPYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVGGMAF 1537 >ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum lycopersicum] Length = 1846 Score = 2212 bits (5733), Expect = 0.0 Identities = 1094/1178 (92%), Positives = 1144/1178 (97%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRK+TKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INLLRYSAWH + EKG+ITPGDTQVRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQ AFS+GIGDTIAD TM KI+ETI+ AK +V ELI+AAQEK Sbjct: 659 AARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LEAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 LLEAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+ Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIET 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK K+ F+DMY YEID PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR Sbjct: 899 QKLDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 QLGTEIA TGDNSWPLPVNI+RLVLNAQKTF++DFRRPSDMHPMEIVEAVDKLQERLKV Sbjct: 959 HQLGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDDYLS+EAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVVGEIESRFLQSLVA Sbjct: 1019 VPGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK V KTKE+AK VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDE Sbjct: 1139 LKPEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR Sbjct: 1199 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRGIPDINKVFIKN KV KFD+NEGF Sbjct: 1259 IMNDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGF 1317 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 KAENEWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1318 KAENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1377 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+ Sbjct: 1378 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAES 1437 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D+LRGVTENIMLGQLAPIGTG C+LY+NEEMLKQAIEIPLPSYMEGGLEFGMTPGRSP+ Sbjct: 1438 DHLRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSPNY+LSPN+R+SP++DAQFSPYVGG+AF Sbjct: 1498 GTPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535 >ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum tuberosum] Length = 1839 Score = 2212 bits (5731), Expect = 0.0 Identities = 1093/1178 (92%), Positives = 1144/1178 (97%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRK+TKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INLLRYSAWH + EKG+ITPGDTQVRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQ AFS+GIGDTIAD TM KI+ETI+ AK +V ELI+AAQEK Sbjct: 659 AARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LEAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 LLEAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+ Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIET 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK K+ F+DMY YEID PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR Sbjct: 899 QKLDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 QLGTEIA TGDNSWPLPVNI+RLVLNAQKTF++DFRRPSDMHPMEIVEAVDKLQERLKV Sbjct: 959 HQLGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDDYLS+EAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVVGEIESRFLQSLVA Sbjct: 1019 VPGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK V KTKE+AK VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDE Sbjct: 1139 LKPEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIR Sbjct: 1199 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRGIPDINKVFIKN KV KFD+NEGF Sbjct: 1259 IMNDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGF 1317 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 KAENEWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1318 KAENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1377 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+ Sbjct: 1378 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAES 1437 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D+LRGVTENIMLGQLAPIGTG C+LY+NEEMLKQAIEIPLPSYMEGGLEFGMTPGRSP+ Sbjct: 1438 DHLRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSPNY+LSPN+R+SP++DAQFSPYVGG+AF Sbjct: 1498 GTPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535 >ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis vinifera] Length = 1848 Score = 2195 bits (5687), Expect = 0.0 Identities = 1081/1178 (91%), Positives = 1141/1178 (96%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IR+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INLLR SAWH E E GFITPGDTQVRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELIRAAQE+ Sbjct: 659 AARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQER 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+ Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIET 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ ++KYEID NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR Sbjct: 899 QKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 FQLGTEIATTGDNSWP+PVN+KRL+ NAQKTF+VD RRPSDMHPMEIVEAVDKLQERLKV Sbjct: 959 FQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDD +S+EAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK VSKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FVKSYYEMPDE Sbjct: 1139 LKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 E+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR Sbjct: 1199 EVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK+GKVNKFDE+EGF Sbjct: 1259 IMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K E EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1319 KPEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D+LRGVTENIMLGQLAPIGTGDCALY+N++ML+ AIE+ LPSYME GL+FGMTP RSP+ Sbjct: 1439 DFLRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPIT 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSPNY+LSPNLRLSP++DAQFSPYVGG+AF Sbjct: 1498 GTPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535 >ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda] gi|548833823|gb|ERM96260.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda] Length = 1844 Score = 2174 bits (5632), Expect = 0.0 Identities = 1073/1178 (91%), Positives = 1134/1178 (96%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 362 ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 421 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IR+DGQRLDLRYLKKS D HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 422 IREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 481 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 482 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 541 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 542 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQ 601 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL+RYSAWH E E GFITPGDT VRIE+GELLSGTLCKKTLG+SSGSLIHVIWEEVGPD Sbjct: 602 INLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGPD 661 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQ AFS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEK Sbjct: 662 AARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQEK 721 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 722 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 781 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 782 MTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 841 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 842 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 901 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+KR +F ++YKYEIDQ NW+P+YMLPE VEDLKTIRE ++VFDAEVQKLEADR Sbjct: 902 QKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEADR 961 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 QLGTEI TTGDNSWP+PVN+KRL+ NAQK F+VD RRPSDMHPMEIVEAVDKLQERLKV Sbjct: 962 HQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLKV 1021 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDD +S+EAQKNATLFFNILLRS ASKRVLKEYRLTREAFDWV+GEIESRFLQSLVA Sbjct: 1022 VPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVA 1081 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+ Sbjct: 1082 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1141 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK V+KTKEKAKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDV+FV+SYYEMPDE Sbjct: 1142 LKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPDE 1201 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 E+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR Sbjct: 1202 EVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1261 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+ DESSEDDVFLKKIE NMLTEMALRGIPDINKVFIK+GK+NKFDENEGF Sbjct: 1262 IMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEGF 1321 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K E EWMLDTEGVNLLAV+C+E+VDA RTTSNHLIEVI+VLGIEAVR+ALLDELRVVISF Sbjct: 1322 KPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVISF 1381 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE Sbjct: 1382 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEA 1441 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D+LRGVTENIMLGQLAPIGTGDCALY+N++ML+QAIE+ LPSYME G++FGMTP RSPM Sbjct: 1442 DHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GMDFGMTPSRSPMT 1500 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYH+GMMSP Y+LSPN+R SP++DAQFSPYVGG+AF Sbjct: 1501 GTPYHEGMMSP-YLLSPNMRSSPITDAQFSPYVGGMAF 1537 >gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis] Length = 1866 Score = 2153 bits (5579), Expect = 0.0 Identities = 1064/1198 (88%), Positives = 1129/1198 (94%), Gaps = 21/1198 (1%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 354 ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 413 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYK--------------------VERHLNDGDFVLFN 302 IRDDGQRLDLRYLKKSSD HLELGYK VERHLNDGDFVLFN Sbjct: 414 IRDDGQRLDLRYLKKSSDHHLELGYKARLPILLLLLLFLGPWSGSVVERHLNDGDFVLFN 473 Query: 303 RQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 482 RQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM Sbjct: 474 RQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 533 Query: 483 MVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTI 662 MVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAP I Sbjct: 534 MVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAI 593 Query: 663 LKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKK 842 LKP+PLWTGKQVFNLIIP+QINL R SAWH E E G+ITPGDT VRIEKGELLSGTLCKK Sbjct: 594 LKPRPLWTGKQVFNLIIPKQINLNRTSAWHAESESGYITPGDTLVRIEKGELLSGTLCKK 653 Query: 843 TLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKIS 1022 TLG+SSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FS+GIGDTIAD TM KI+ Sbjct: 654 TLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKIN 713 Query: 1023 ETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAES 1202 ETI++AKN+V ELIR AQ K+LEAEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSL+ES Sbjct: 714 ETISRAKNDVKELIRKAQAKELEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSES 773 Query: 1203 NNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFV 1382 NNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFV Sbjct: 774 NNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFV 833 Query: 1383 ENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSL 1562 ENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSL Sbjct: 834 ENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSL 893 Query: 1563 GDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLK 1742 GDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F +++YE D WNP YMLPE VEDLK Sbjct: 894 GDVIQFLYGEDGMDSVWIESQKLDSLKMKKTEFERVFRYEFDNETWNPTYMLPEHVEDLK 953 Query: 1743 TIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPS 1922 TIRE R+VFDAEVQKLE+DR QLGTEIATTGDNSWPLPVN+KRL+ NAQKTF++DFRR S Sbjct: 954 TIREFRNVFDAEVQKLESDRLQLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDFRRTS 1013 Query: 1923 DMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTR 2102 DMHPMEIVEA+DKLQERLKVV G+D LS+EAQKNATLFFNILLRS ASKRVL+EYRLTR Sbjct: 1014 DMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTR 1073 Query: 2103 EAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVP 2282 E F+WV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVP Sbjct: 1074 EGFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVP 1133 Query: 2283 RLREIINVAKKIKTPSLSVFLKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPM 2462 RLREIINVAK+IKTPSLSVFLK SKTKE+AK VQCALEYTTLRSVTQATEVWYDPDPM Sbjct: 1134 RLREIINVAKRIKTPSLSVFLKPEASKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPM 1193 Query: 2463 STIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD 2642 STII+EDV+FV+SYYEMPDEEI+PDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFD Sbjct: 1194 STIIDEDVDFVRSYYEMPDEEINPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFD 1253 Query: 2643 DDLTCIFNDDNAEKLILRIRIMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPD 2822 DDLTCIFNDDNAEKLILRIRIMNDEAPKG++ DE++EDDVFLKKIE NMLTEM+LRGIPD Sbjct: 1254 DDLTCIFNDDNAEKLILRIRIMNDEAPKGDLTDEAAEDDVFLKKIESNMLTEMSLRGIPD 1313 Query: 2823 INKVFIKNGKVNKFDENEGFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEV 3002 INKVFIK+GKVNKFDEN+GFK ENEWMLDTEGVNLLAVICHEDVDA+RTTSNHLIEVIEV Sbjct: 1314 INKVFIKHGKVNKFDENDGFKPENEWMLDTEGVNLLAVICHEDVDAKRTTSNHLIEVIEV 1373 Query: 3003 LGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMM 3182 LGIEAVR++LLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMM Sbjct: 1374 LGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMM 1433 Query: 3183 RCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPL 3362 RCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTG CALY+N+EMLK AIE+ L Sbjct: 1434 RCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQL 1493 Query: 3363 PSYMEGGLEFGMTPGRSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 PSYM+ GL+FGMTP RSP+ GTPYH+GMMSP Y+LSPNLRLSP+SDAQFSPYVGG+AF Sbjct: 1494 PSYMD-GLDFGMTPSRSPVSGTPYHEGMMSPGYLLSPNLRLSPISDAQFSPYVGGMAF 1550 >ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica] gi|462398589|gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica] Length = 1844 Score = 2153 bits (5578), Expect = 0.0 Identities = 1060/1178 (89%), Positives = 1124/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R SAWH E E G ITPGDT VRIEKGELL+GTLCKK LG+S+GSLIHVIWEEVGPD Sbjct: 599 INLQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+KAKNEV +LI AQ K Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 QLEAEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 QLEAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ + YE+D NWNP+YML E VEDLKTIRE R+VFDAEVQKLE DR Sbjct: 899 QKLDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 QLGTEIA TGDNSWPLPVN+KRL+ NAQKTF++DFRR SDMHPMEIVEA+DKLQERLKV Sbjct: 959 LQLGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDD LS+EAQKNATLFF+ILLRS ASKRVL EYRLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK +KTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FV SYYEMPDE Sbjct: 1139 LKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 E++PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR Sbjct: 1199 EVNPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMN EAPKGE+ DES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK+GKVNKFD NEGF Sbjct: 1259 IMNAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 KAE EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVR++LLDELRVVISF Sbjct: 1319 KAEQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AET Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAET 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTGDCALY+N+EMLK AIE+ LPSYM+ GL+FGMTP RSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYH+GMMSPNY+LSPNLRLSP+SDAQFSPYVGG+AF Sbjct: 1498 GTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza brachyantha] Length = 1855 Score = 2148 bits (5566), Expect = 0.0 Identities = 1049/1178 (89%), Positives = 1127/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IR+DGQRLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDT I+KDVFMNILMWWEDFDGKVPAP ILKP+P+WTGKQVFNLIIP+ Sbjct: 539 DTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKP 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL+R+SAWH E E GFITPGDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+ AKNEV ELI+ A +K Sbjct: 659 AARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHDK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 HLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ +++YE+D NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR Sbjct: 899 QKLDSLKMKKGEFDTVFRYELDDENWRPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 FQLGTEIATTGDN+WP+PVN+KRL+ NAQKTF++D RRPSDMHPMEIVEA+DKLQERLKV Sbjct: 959 FQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDD +S+EAQKNATLFFNILLRS ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK V+K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDVEFV+SYYEMPDE Sbjct: 1139 LKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 ++DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDL+CIFNDDNA+KLILR+R Sbjct: 1199 DVDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 I NDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GKVNKF++N+GF Sbjct: 1259 ITNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNDGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K +NEWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISF Sbjct: 1319 KPDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+ Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAES 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTG CALY+N++ML+QAIE+ LPSY+E GL+FGMTP RSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVE-GLDFGMTPARSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYH+GMMSP+Y+LSPN+R SP++DAQFSPYVGG+AF Sbjct: 1498 GTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535 >ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] Length = 1853 Score = 2145 bits (5559), Expect = 0.0 Identities = 1058/1178 (89%), Positives = 1122/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R SAWH E E G ITPGDT VRIEKGELLSGTLCKK LG+S+GSLIHVIWEEVGPD Sbjct: 599 INLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+ AKNEV LI+ AQE+ Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQER 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LE EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 SLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F +++YE + NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR Sbjct: 899 QKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 +QLGTEIATTG+NSWP+PVN+KRL+ NAQKTF++DFRR SDMHPMEIVEA+DKLQERLKV Sbjct: 959 YQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V G+D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK +KTKE+AK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED++FVKSYYEMPDE Sbjct: 1139 LKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 EI P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIR Sbjct: 1199 EIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GKVNKFDENEGF Sbjct: 1259 IMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K E EWMLDTEGVNLLAV+ HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1319 KPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D+LRGVTENIMLGQLAPIGTG CALY+N+EMLK AIE+ LPSY++ GL+FGMTP RSP+ Sbjct: 1439 DHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYH+GMMSPNY+LSPNLRLSP+SDAQFSPYVGG+AF Sbjct: 1498 GTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] Length = 1832 Score = 2145 bits (5559), Expect = 0.0 Identities = 1058/1178 (89%), Positives = 1122/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R SAWH E E G ITPGDT VRIEKGELLSGTLCKK LG+S+GSLIHVIWEEVGPD Sbjct: 599 INLTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+ AKNEV LI+ AQE+ Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQER 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LE EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 SLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F +++YE + NW PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR Sbjct: 899 QKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 +QLGTEIATTG+NSWP+PVN+KRL+ NAQKTF++DFRR SDMHPMEIVEA+DKLQERLKV Sbjct: 959 YQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V G+D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK +KTKE+AK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED++FVKSYYEMPDE Sbjct: 1139 LKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 EI P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIR Sbjct: 1199 EIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+ DES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GKVNKFDENEGF Sbjct: 1259 IMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K E EWMLDTEGVNLLAV+ HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1319 KPEMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D+LRGVTENIMLGQLAPIGTG CALY+N+EMLK AIE+ LPSY++ GL+FGMTP RSP+ Sbjct: 1439 DHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYH+GMMSPNY+LSPNLRLSP+SDAQFSPYVGG+AF Sbjct: 1498 GTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535 >ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5 [Citrus sinensis] Length = 1963 Score = 2143 bits (5553), Expect = 0.0 Identities = 1052/1178 (89%), Positives = 1125/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM I++TI+KAKN V LI+ AQ+K Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LE EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 SLEPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ +++E+D+ NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR Sbjct: 899 QTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 +QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+VD RRPSDMHPME+VEAVDKLQERLKV Sbjct: 959 YQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V G+D LS+EAQKNATLFFNILLRS ASKRVLKE+RLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK GV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEEDVEFVKSYYEMPDE Sbjct: 1139 LKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 +I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIR Sbjct: 1199 DIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GK K+D+NEGF Sbjct: 1259 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISF Sbjct: 1319 KSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+ Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAES 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE+ LPSYME GLEFGMTP RSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF Sbjct: 1498 GTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4 [Citrus sinensis] Length = 1853 Score = 2143 bits (5553), Expect = 0.0 Identities = 1052/1178 (89%), Positives = 1125/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM I++TI+KAKN V LI+ AQ+K Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LE EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 SLEPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ +++E+D+ NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR Sbjct: 899 QTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 +QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+VD RRPSDMHPME+VEAVDKLQERLKV Sbjct: 959 YQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V G+D LS+EAQKNATLFFNILLRS ASKRVLKE+RLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK GV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEEDVEFVKSYYEMPDE Sbjct: 1139 LKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 +I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIR Sbjct: 1199 DIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GK K+D+NEGF Sbjct: 1259 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISF Sbjct: 1319 KSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+ Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAES 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE+ LPSYME GLEFGMTP RSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF Sbjct: 1498 GTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3 [Citrus sinensis] Length = 1790 Score = 2143 bits (5553), Expect = 0.0 Identities = 1052/1178 (89%), Positives = 1125/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM I++TI+KAKN V LI+ AQ+K Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LE EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 SLEPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ +++E+D+ NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR Sbjct: 899 QTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 +QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+VD RRPSDMHPME+VEAVDKLQERLKV Sbjct: 959 YQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V G+D LS+EAQKNATLFFNILLRS ASKRVLKE+RLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK GV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEEDVEFVKSYYEMPDE Sbjct: 1139 LKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 +I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIR Sbjct: 1199 DIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GK K+D+NEGF Sbjct: 1259 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISF Sbjct: 1319 KSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+ Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAES 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE+ LPSYME GLEFGMTP RSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF Sbjct: 1498 GTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1 [Citrus sinensis] gi|568825318|ref|XP_006467028.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X2 [Citrus sinensis] Length = 1860 Score = 2143 bits (5553), Expect = 0.0 Identities = 1052/1178 (89%), Positives = 1125/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM I++TI+KAKN V LI+ AQ+K Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LE EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 SLEPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ +++E+D+ NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR Sbjct: 899 QTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 +QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+VD RRPSDMHPME+VEAVDKLQERLKV Sbjct: 959 YQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V G+D LS+EAQKNATLFFNILLRS ASKRVLKE+RLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK GV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEEDVEFVKSYYEMPDE Sbjct: 1139 LKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 +I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIR Sbjct: 1199 DIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GK K+D+NEGF Sbjct: 1259 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISF Sbjct: 1319 KSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+ Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAES 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE+ LPSYME GLEFGMTP RSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF Sbjct: 1498 GTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina] gi|557527347|gb|ESR38597.1| hypothetical protein CICLE_v10024686mg [Citrus clementina] Length = 1860 Score = 2143 bits (5553), Expect = 0.0 Identities = 1052/1178 (89%), Positives = 1125/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM I++TI+KAKN V LI+ AQ+K Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LE EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 SLEPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ +++E+D+ NWNPNYML E ++DLKTI+E+R VFDAEVQKLEADR Sbjct: 899 QTLDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 +QL TEIAT+GD+SWPLPVN+KRL+ NAQKTF+VD RRPSDMHPME+VEAVDKLQERLKV Sbjct: 959 YQLATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V G+D LS+EAQKNATLFFNILLRS ASKRVLKE+RLTREAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK GV+ TKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEEDVEFVKSYYEMPDE Sbjct: 1139 LKPGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 +I P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIR Sbjct: 1199 DIAPEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+NDES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GK K+D+NEGF Sbjct: 1259 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K+E+EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIE+IEVLGIEAVR+ALLDELRVVISF Sbjct: 1319 KSEDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+ Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAES 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTGDC+LY+N+EMLK AIE+ LPSYME GLEFGMTP RSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYME-GLEFGMTPARSPVS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF Sbjct: 1498 GTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535 >ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria vesca subsp. vesca] Length = 1842 Score = 2142 bits (5549), Expect = 0.0 Identities = 1050/1178 (89%), Positives = 1121/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 357 ARTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 416 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 417 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 476 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 477 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 536 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 537 DTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQ 596 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL R SAWH E E G ITPGDT VRIEKGELLSGTLCKK LG+S+GSLIHVIWEEVGPD Sbjct: 597 INLQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPD 656 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+KAKNEV ELI AQ K Sbjct: 657 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSK 716 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LE EPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 717 SLEPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 776 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 777 MTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 836 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 837 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 896 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ + Y D NWNP+YMLPE VEDLKTIRE R+VFDAEV KLE DR Sbjct: 897 QKLDSLKMKKKEFDKTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDR 956 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 QLGTEIA TGDNSWPLPVN+KRL+ NAQKTF++DFRR SDMHPMEIVEA+DKLQERL+V Sbjct: 957 LQLGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRV 1016 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDD LS+EAQKNATLFFNILLRS ASKRVL+EYRLTREAF+WV+GEIESRFLQSLVA Sbjct: 1017 VPGDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVA 1076 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+ Sbjct: 1077 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVY 1136 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK +KTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FV+SYYEMPDE Sbjct: 1137 LKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPDE 1196 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 E++PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNAEKLILRIR Sbjct: 1197 EVNPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRIR 1256 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMN+E PKG+ DES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK+GKVNKFD+NEGF Sbjct: 1257 IMNEETPKGDSQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGF 1316 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 KAE EWMLDTEGVNLLAV+CH+DVDA+RTTSNHLIE+IEVLGIEAVR++LLDELRVVISF Sbjct: 1317 KAEQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISF 1376 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA+V+AET Sbjct: 1377 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDASVFAET 1436 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D+LRGVTENIMLGQLAPIGTGDCALY+N+EMLK AIE+ LPSY++ GL+FGMTP RSP+ Sbjct: 1437 DHLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYVD-GLDFGMTPSRSPVS 1495 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTP+ DGMMSPNY+LSPN+R+SP+SDAQFSPYVGG+AF Sbjct: 1496 GTPFRDGMMSPNYLLSPNMRMSPISDAQFSPYVGGMAF 1533 >ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X1 [Setaria italica] Length = 1852 Score = 2139 bits (5543), Expect = 0.0 Identities = 1046/1179 (88%), Positives = 1127/1179 (95%), Gaps = 2/1179 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IR+DGQRLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDT I+KDVFMN LMWW+DFDGK+PAP ILKP+P+WTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTLIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL+R+SAWH E E GFITPGDT VRIEKGELLSGTLCKK+LG+ SGSLIHVIWEEVGPD Sbjct: 599 INLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQ FS+GIGDTIAD TM KI+ETI+KAKNEV ELI+ AQ+K Sbjct: 659 AARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAQDK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 HLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+++++YE+D NW PNYMLPE V+DLKTIRE R+VF+AEVQKLEADR Sbjct: 899 QKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 FQLGTEI TTGDNSWP+PVN+KRL+ NAQKTF++DFRRPSDMHPMEIVEA+DKLQERLKV Sbjct: 959 FQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDD +S+EAQKNATLFFNILLRS ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK V+K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDVEFV+SYYEMPDE Sbjct: 1139 LKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 +IDPDKISPWLLRIELNREMM+DKKLSMADIAEKIN EFDDDL+CIFNDDNA+KLILRIR Sbjct: 1199 DIDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 I ND+APKGE+ DES+EDDVFLKKIEGNMLTEMALRGIPDINKVFIK+GKVNKFD++EGF Sbjct: 1259 ITNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 KA+NEWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1319 KADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEA 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D LRGVTENIMLGQLAPIGTG CALY+N++ML+QAIE+ LPSY+E GL+FGMTP RSP+ Sbjct: 1439 DLLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVE-GLDFGMTPARSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPV-SDAQFSPYVGGVAF 3533 GTPYH+GMMSP+Y+LSPN+R SP+ +DA FSPYVG +AF Sbjct: 1498 GTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1536 >ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X2 [Setaria italica] Length = 1852 Score = 2137 bits (5538), Expect = 0.0 Identities = 1045/1179 (88%), Positives = 1126/1179 (95%), Gaps = 2/1179 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IR+DGQRLDLRY+KKSSDQHL+LGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IREDGQRLDLRYVKKSSDQHLDLGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDT I+KDVFMNILMWW+DFDGK+PAP ILKP+P+WTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL+R+SAWH E E GFITPGDT VRIEKGELLSGTLCKK+LG+ SGSLIHVIWEEVGPD Sbjct: 599 INLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQ FS+GIGDTIAD TM KI+ETI+KAKNEV ELI+ A E Sbjct: 659 AARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAHEN 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 HLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+++++YE+D NW PNYMLPE V+DLKTIRE R+VF+AEVQKLEADR Sbjct: 899 QKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 FQLGTEI TTGDNSWP+PVN+KRL+ NAQKTF++DFRRPSDMHPMEIVEA+DKLQERLKV Sbjct: 959 FQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDD +S+EAQKNATLFFNILLRS ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA Sbjct: 1019 VPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+ Sbjct: 1079 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK V+K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDVEFV+SYYEMPDE Sbjct: 1139 LKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 +IDPDKISPWLLRIELNREMM+DKKLSMADIAEKIN EFDDDL+CIFNDDNA+KLILRIR Sbjct: 1199 DIDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 I ND+APKGE+ DES+EDDVFLKKIEGNMLTEMALRGIPDINKVFIK+GKVNKFD++EGF Sbjct: 1259 ITNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 KA+NEWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1319 KADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEA 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 D LRGVTENIMLGQLAPIGTG CALY+N++ML+QAIE+ LPSY+E GL+FGMTP RSP+ Sbjct: 1439 DLLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVE-GLDFGMTPARSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPV-SDAQFSPYVGGVAF 3533 GTPYH+GMMSP+Y+LSPN+R SP+ +DA FSPYVG +AF Sbjct: 1498 GTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1536 >ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine max] Length = 1827 Score = 2136 bits (5535), Expect = 0.0 Identities = 1052/1178 (89%), Positives = 1122/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 DTLLGCRKITKRDTFI KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+Q Sbjct: 539 DTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL+RYS+WH E E+G ITPGDT VRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM I++TI+ AK +V +LIR AQEK Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 +LEAEPGRTMM+SFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 KLEAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+ Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIET 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ +F+ +++YE D NW P YML E VEDLKTIRE R+VF+AEVQKLEADR Sbjct: 899 QKLDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 +QL TEIATTGD+S PLPVN+KRL+ NAQKTF+VDFRRPSDMHPMEIVEA+DKLQERLKV Sbjct: 959 YQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V G+D LS EAQKNATL FNILLRS ASKRVL+EYRL+REAF+WVVGEIESRFLQSLVA Sbjct: 1019 VPGEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 +GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+ Sbjct: 1079 SGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 L+S V KTKE+AK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED +FVKSYYEMPDE Sbjct: 1139 LRSDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 E+ +KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR Sbjct: 1199 EVALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+ DES+EDDVFLKKIE NMLTEM LRGIPDINKVFIKN KV KFDEN+GF Sbjct: 1259 IMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDENQGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISF Sbjct: 1319 KPNEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTG+CALY+N+EMLK AIE+ LPSYM+ GL+FGMTP RSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMD-GLDFGMTPARSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 GTPYH+G+MSP+Y+LSPNLRLSP SDAQFSPYVGG+AF Sbjct: 1498 GTPYHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 1535 >ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer arietinum] Length = 1834 Score = 2134 bits (5530), Expect = 0.0 Identities = 1053/1178 (89%), Positives = 1121/1178 (95%), Gaps = 1/1178 (0%) Frame = +3 Query: 3 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 182 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI Sbjct: 359 ARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 418 Query: 183 IRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 362 IRDDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY Sbjct: 419 IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 478 Query: 363 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQ 542 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQ Sbjct: 479 STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 538 Query: 543 DTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQ 722 D+LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVP PTILKP+P+WTGKQVFNLIIP+Q Sbjct: 539 DSLLGCRKITKRDTFISKDVFMNILMWWEDFDGKVPTPTILKPEPMWTGKQVFNLIIPKQ 598 Query: 723 INLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPD 902 INL+RYS+WH E EKG ITPGDT VRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPD Sbjct: 599 INLIRYSSWHNENEKGPITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPD 658 Query: 903 AARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEK 1082 AARKFLGHTQWLVNYWLLQNAFS+GIGDTIAD TM I++TI++AK +V +LIR AQEK Sbjct: 659 AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISQAKEKVKQLIREAQEK 718 Query: 1083 QLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQ 1262 +LEAEPGRTMMESFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQ Sbjct: 719 KLEAEPGRTMMESFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQ 778 Query: 1263 MTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGG 1442 MTACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGG Sbjct: 779 MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 838 Query: 1443 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 1622 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+ Sbjct: 839 REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIET 898 Query: 1623 QPLESLKLKRMDFNDMYKYEIDQPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR 1802 Q L+SLK+K+ DF+ ++YE D NW P YML E VEDLKTIRE R+VF+AEVQKL+ADR Sbjct: 899 QKLDSLKMKKADFDRAFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLDADR 958 Query: 1803 FQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKV 1982 FQL TEIATTGD+S PLPVN+KRL+ NAQKTF+VDFRRPSDMHPMEIVEA+DKLQERLKV Sbjct: 959 FQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKV 1018 Query: 1983 VVGDDYLSLEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVA 2162 V GDD LS EAQKNATL FNILLRS ASKRVL+EYRL+REAF+WVVGEIESRFLQSLVA Sbjct: 1019 VPGDDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVA 1078 Query: 2163 AGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVF 2342 +GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV+ Sbjct: 1079 SGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVY 1138 Query: 2343 LKSGVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE 2522 LK V KTKE+AK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FVKSYYEMPDE Sbjct: 1139 LKPEVCKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDE 1198 Query: 2523 EIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 2702 E+ +KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR Sbjct: 1199 EVALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 1258 Query: 2703 IMNDEAPKGEMNDESSEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNGKVNKFDENEGF 2882 IMNDEAPKGE+ DES+EDDVFLKKIE NMLTEM LRGI DINKVFIKN K+ KFDENEGF Sbjct: 1259 IMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIADINKVFIKNTKIQKFDENEGF 1318 Query: 2883 KAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISF 3062 K EWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVISF Sbjct: 1319 KPYEEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1378 Query: 3063 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 3242 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET Sbjct: 1379 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1438 Query: 3243 DYLRGVTENIMLGQLAPIGTGDCALYMNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPM- 3419 DYLRGVTENIMLGQLAPIGTG+CAL +N+EMLK AIE+ LPSYME GL+FGMTPGRSP+ Sbjct: 1439 DYLRGVTENIMLGQLAPIGTGECALLLNDEMLKNAIELQLPSYME-GLDFGMTPGRSPIS 1497 Query: 3420 GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 3533 TPYH+G+MSP+Y+LSPNLRLSP +DAQFSPYVGG+AF Sbjct: 1498 ATPYHEGLMSPSYLLSPNLRLSPTNDAQFSPYVGGMAF 1535