BLASTX nr result
ID: Mentha28_contig00012462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00012462
(573 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus... 208 9e-52
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr... 202 4e-50
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi... 199 3e-49
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein... 197 2e-48
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 190 3e-46
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 189 6e-46
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi... 188 1e-45
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 186 4e-45
gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis] 185 6e-45
ref|XP_007204825.1| hypothetical protein PRUPE_ppa004064mg [Prun... 185 6e-45
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,... 183 2e-44
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 182 7e-44
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 182 7e-44
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis] 178 1e-42
ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containi... 175 9e-42
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana] 173 3e-41
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar... 173 3e-41
ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containi... 172 4e-41
ref|XP_006581143.1| PREDICTED: pentatricopeptide repeat-containi... 172 4e-41
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps... 172 7e-41
>gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus guttatus]
Length = 552
Score = 208 bits (529), Expect = 9e-52
Identities = 105/185 (56%), Positives = 133/185 (71%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD ++N ++ GLCR K V+KAFE F +M+S C PDLVTYNTLINGL
Sbjct: 218 PDTCSFNIVMRGLCRASK------------VDKAFEFFDVMRSFSCSPDLVTYNTLINGL 265
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
CRVGK D A++LLREI+ QSEFS DVVTY+SVISGYCKLGK + LF EM++ GI P+
Sbjct: 266 CRVGKVDRAEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMINNGIRPN 325
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
++TFNAIIDGF K GE+ SA K+ ERM ++G PD VTF SLI G+ R GD + + +L+
Sbjct: 326 LFTFNAIIDGFGKKGEVASASKMYERMTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLN 385
Query: 557 EMNKR 571
EMN++
Sbjct: 386 EMNEK 390
Score = 105 bits (263), Expect = 6e-21
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 24/205 (11%)
Frame = +2
Query: 20 DLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVEKAFEIF 130
D+VTY ++I+G C++GK AIIDGF K G+V A +++
Sbjct: 290 DVVTYTSVISGYCKLGKTDAAAFLFEEMINNGIRPNLFTFNAIIDGFGKKGEVASASKMY 349
Query: 131 TIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCK 310
M ++G PD+VT+ +LI+G CR G LL E+ + SP+V T+S +IS CK
Sbjct: 350 ERMTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLNEMN-EKRVSPNVFTFSVLISALCK 408
Query: 311 LGKMEYVESLFHEML-DCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDV 487
++ L +++ I+P + +N +IDG+ K G + A I M + G + D +
Sbjct: 409 ENRLNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKAGNVDEANAIVAEMEAKGCVHDKM 468
Query: 488 TFASLIGGYSRLGDFDECMKILDEM 562
TF LI G+ G E + + ++M
Sbjct: 469 TFTILILGHCMKGRMFEAIGMYNKM 493
Score = 73.2 bits (178), Expect = 5e-11
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Frame = +2
Query: 77 IIDGFAKAGQVEKAFEIFTIMKSSGCHP--DLVT---YNTLINGLCRVGKADGAQDLLRE 241
++ FA AG+ A EI I ++ C+ +LV+ YN ++ L + D A +
Sbjct: 150 VVSSFANAGKFRIAEEIL-IARAEYCNEKDELVSSFVYNNFLSMLTNKNRIDDAVLFFKS 208
Query: 242 -IQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKI 418
I F PD +++ V+ G C+ K++ F M PD+ T+N +I+G ++
Sbjct: 209 HILRLKSFCPDTCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTLINGLCRV 268
Query: 419 GEMTSALK-IRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
G++ A + +RE V S D VT+ S+I GY +LG D + +EM
Sbjct: 269 GKVDRAEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEM 317
>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
gi|557556032|gb|ESR66046.1| hypothetical protein
CICLE_v10007804mg [Citrus clementina]
Length = 595
Score = 202 bits (515), Expect = 4e-50
Identities = 101/182 (55%), Positives = 128/182 (70%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD T+N LI GLCR+G +V+KAFE F M S GC PD+VTYNTLI+GL
Sbjct: 259 PDTWTFNILIRGLCRIG------------EVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
CRV + +LL+E++++SEF PDVVTY+SVISGYCKLGKM+ S+++EM CGI P
Sbjct: 307 CRVNEVARGHELLKEVKFKSEFLPDVVTYTSVISGYCKLGKMDKATSIYNEMNSCGIKPS 366
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
TFN +IDGF K+G M SA +RERM+S G LPD VTF+SLI GY R G ++ +K+ D
Sbjct: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSLGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
Query: 557 EM 562
EM
Sbjct: 427 EM 428
Score = 126 bits (317), Expect = 4e-27
Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKAA------------------------IIDGFAKAGQV 109
S GC PD+VTYNTLI+GLCRV + A +I G+ K G++
Sbjct: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTSVISGYCKLGKM 348
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
+KA I+ M S G P VT+N LI+G +VG A+ +RE + PDVVT+SS
Sbjct: 349 DKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE-YMRERMLSLGYLPDVVTFSS 407
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSG 469
+I GYC+ G++ L EM + P+VYTF +I+ K + A + +++ +
Sbjct: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFAILINALCKENRLNDARRFLKQLKWND 467
Query: 470 VLPDDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
++P + +I G+ + G+ DE I+ EM ++
Sbjct: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
Score = 99.4 bits (246), Expect = 6e-19
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVE 112
S G P VT+N LI+G +VG +++IDG+ + GQ+
Sbjct: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSLGYLPDVVTFSSLIDGYCRNGQLN 419
Query: 113 KAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSV 292
+ ++ MK P++ T+ LIN LC+ + + A+ L+++++ ++ P Y+ V
Sbjct: 420 QGLKLCDEMKGKNLSPNVYTFAILINALCKENRLNDARRFLKQLKW-NDLVPKPFMYNPV 478
Query: 293 ISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGV 472
I G+CK G ++ + EM + PD TF +I G G M A+ I +M+ G
Sbjct: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
Query: 473 LPDDVTFASLIGGYSRLGDFDECMKILDEMNK 568
PDD+T SLI + G +E +I+ ++
Sbjct: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
Score = 72.8 bits (177), Expect = 6e-11
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 5/183 (2%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TYN ++ LC +G + +F M+S G P+ ++ R G
Sbjct: 158 TYNLVMRSLCEMGLHDSVQ------------VVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
Query: 209 KADGAQDLLREIQYQSEFSPDVVT-----YSSVISGYCKLGKMEYVESLFHEMLDCGIMP 373
K D A+ LL S+F P VT Y+S+++ K + +F E P
Sbjct: 206 KCDAAKGLL------SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
Query: 374 DVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKIL 553
D +TFN +I G +IGE+ A + M S G PD VT+ +LI G R+ + ++L
Sbjct: 260 DTWTFNILIRGLCRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
Query: 554 DEM 562
E+
Sbjct: 320 KEV 322
>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Citrus sinensis]
gi|568841566|ref|XP_006474729.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Citrus sinensis]
Length = 595
Score = 199 bits (507), Expect = 3e-49
Identities = 100/182 (54%), Positives = 127/182 (69%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD T+N LI GL R+G +V+KAFE F M S GC PD+VTYNTLI+GL
Sbjct: 259 PDTWTFNILIQGLSRIG------------EVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
CRV + +LL+E++++SEFSPDVVTY+SVISGYCKLGKM+ +++EM CGI P
Sbjct: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
TFN +IDGF K+G M SA +RERM+S G LPD VTF+SLI GY R G ++ +K+ D
Sbjct: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
Query: 557 EM 562
EM
Sbjct: 427 EM 428
Score = 126 bits (317), Expect = 4e-27
Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKAA------------------------IIDGFAKAGQV 109
S GC PD+VTYNTLI+GLCRV + A +I G+ K G++
Sbjct: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
+KA I+ M S G P VT+N LI+G +VG A+ +RE + PDVVT+SS
Sbjct: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE-YMRERMLSFGYLPDVVTFSS 407
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSG 469
+I GYC+ G++ L EM + P+VYTF +I+ K + A + +++ +
Sbjct: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
Query: 470 VLPDDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
++P + +I G+ + G+ DE I+ EM ++
Sbjct: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
Score = 100 bits (250), Expect = 2e-19
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVE 112
S G P VT+N LI+G +VG +++IDG+ + GQ+
Sbjct: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
Query: 113 KAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSV 292
+ ++ MK P++ T+ LIN LC+ + + A+ L+++++ ++ P Y+ V
Sbjct: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW-NDLVPKPFMYNPV 478
Query: 293 ISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGV 472
I G+CK G ++ + EM + PD TF +I G G M A+ I +M++ G
Sbjct: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLTIGC 538
Query: 473 LPDDVTFASLIGGYSRLGDFDECMKILDEMNK 568
PDD+T SLI + G +E +I+ ++
Sbjct: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
Score = 73.9 bits (180), Expect = 3e-11
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TYN ++ LC +G + +F M+S G P+ ++ R G
Sbjct: 158 TYNLVMRSLCEMGLHDSVQ------------VVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
Query: 209 KADGAQDLLREIQYQSEFSPDVVT-----YSSVISGYCKLGKMEYVESLFHEMLDCGIMP 373
K D A+ LL S+F P VT Y+S+++ K + +F E P
Sbjct: 206 KCDAAKGLL------SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
Query: 374 DVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKIL 553
D +TFN +I G ++IGE+ A + M S G PD VT+ +LI G R+ + ++L
Sbjct: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
Query: 554 DEM 562
E+
Sbjct: 320 KEV 322
>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 592
Score = 197 bits (500), Expect = 2e-48
Identities = 97/189 (51%), Positives = 128/189 (67%)
Frame = +2
Query: 5 SGCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTL 184
S +PD T+N LI GLCRVGK V++AFE+F M S GC PD+VTYNT+
Sbjct: 252 SNFYPDAWTFNILIRGLCRVGK------------VDQAFELFNDMGSFGCFPDIVTYNTI 299
Query: 185 INGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCG 364
INGLC+V + D LL ++Q + + SPDVVTY+SVISGYCKLGKM+ +LFHEM+ G
Sbjct: 300 INGLCKVNEVDRGHKLLNQVQSRDDCSPDVVTYTSVISGYCKLGKMDEASALFHEMISSG 359
Query: 365 IMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECM 544
+P V TFN +IDGF K+G+M SA + E+M S G + D VTF SLI GY R+GD ++ +
Sbjct: 360 TVPTVVTFNVLIDGFGKVGDMVSAKSMYEQMASFGCIADVVTFTSLIDGYCRIGDVNQSL 419
Query: 545 KILDEMNKR 571
++ + M R
Sbjct: 420 QLWNTMKGR 428
Score = 111 bits (278), Expect = 1e-22
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Frame = +2
Query: 11 CHPDLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVEKAF 121
C PD+VTY ++I+G C++GK +IDGF K G + A
Sbjct: 325 CSPDVVTYTSVISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLIDGFGKVGDMVSAK 384
Query: 122 EIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISG 301
++ M S GC D+VT+ +LI+G CR+G + + L ++ + + SP+V T++ I+
Sbjct: 385 SMYEQMASFGCIADVVTFTSLIDGYCRIGDVNQSLQLWNTMKGR-DLSPNVYTFAITINA 443
Query: 302 YCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPD 481
CK ++ E+ I+P + FN +IDGF K G + A I M PD
Sbjct: 444 LCKENRLHEARGFLRELQCRNIVPKPFIFNPVIDGFCKAGNLDEANLIVAEMEEKQCHPD 503
Query: 482 DVTFASLIGGYSRLGDFDECMKILDEM 562
VTF LI G+ G E + I ++M
Sbjct: 504 KVTFTILIIGHCMKGRMFEAISIFNKM 530
Score = 100 bits (249), Expect = 3e-19
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVE 112
SSG P +VT+N LI+G +VG ++IDG+ + G V
Sbjct: 357 SSGTVPTVVTFNVLIDGFGKVGDMVSAKSMYEQMASFGCIADVVTFTSLIDGYCRIGDVN 416
Query: 113 KAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSV 292
++ +++ MK P++ T+ IN LC+ + A+ LRE+Q ++ P ++ V
Sbjct: 417 QSLQLWNTMKGRDLSPNVYTFAITINALCKENRLHEARGFLRELQCRN-IVPKPFIFNPV 475
Query: 293 ISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGV 472
I G+CK G ++ + EM + PD TF +I G G M A+ I +M+S G
Sbjct: 476 IDGFCKAGNLDEANLIVAEMEEKQCHPDKVTFTILIIGHCMKGRMFEAISIFNKMLSVGC 535
Query: 473 LPDDVTFASLIGGYSRLGDFDECMKI 550
PDDVT SLI + G E +I
Sbjct: 536 TPDDVTVNSLISCLLKAGMPSEASRI 561
Score = 80.1 bits (196), Expect = 4e-13
Identities = 49/181 (27%), Positives = 86/181 (47%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TYN L+ C +G + A +F M+ G PD +I+ R G
Sbjct: 155 TYNLLMRSFCHMGLH------------DSAKLVFDYMRIDGHLPDTTILGFMISSFGRAG 202
Query: 209 KADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF 388
+ A+ LL ++Q E + +++++ K K+E SL+ E L PD +TF
Sbjct: 203 EFGMAKKLLADVQ-SDEVVISIFALNNLLNMMVKQNKLEEAVSLYKENLGSNFYPDAWTF 261
Query: 389 NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEMNK 568
N +I G ++G++ A ++ M S G PD VT+ ++I G ++ + D K+L+++
Sbjct: 262 NILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQVQS 321
Query: 569 R 571
R
Sbjct: 322 R 322
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Solanum lycopersicum]
Length = 550
Score = 190 bits (482), Expect = 3e-46
Identities = 98/185 (52%), Positives = 124/185 (67%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD T+NT+I GLCRVG V+KAFE F M S GC PD VTYNTLINGL
Sbjct: 213 PDTCTFNTVIRGLCRVGG------------VDKAFEFFNDMGSFGCSPDTVTYNTLINGL 260
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
C VG+ + AQ LL +Q Q SPDVVTY+S+ISGYCKL +M+ +L EM+ GI P+
Sbjct: 261 CAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDEAINLMDEMITYGISPN 320
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
+ TFN +I+GF KIG+M SA+K+ +M + G PD VTF SLI GY R G+ D+ +K+ D
Sbjct: 321 LVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWD 380
Query: 557 EMNKR 571
+MN R
Sbjct: 381 DMNSR 385
Score = 112 bits (281), Expect = 5e-23
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 60/247 (24%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQV 109
S GC PD VTYNTLINGLC VG+ ++I G+ K ++
Sbjct: 243 SFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRM 302
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
++A + M + G P+LVT+N LING ++G A + ++ + PDVVT++S
Sbjct: 303 DEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVG-YPPDVVTFTS 361
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF--------------------------- 388
+I GYC+ G+++ L+ +M + P++YTF
Sbjct: 362 LIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEARELLRQLKSRD 421
Query: 389 ---------NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDEC 541
N ++DGF K G ++ A I M S G D +TF LI G+ G E
Sbjct: 422 DIVPQPFVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEA 481
Query: 542 MKILDEM 562
+ I D+M
Sbjct: 482 LAIFDKM 488
Score = 105 bits (261), Expect = 1e-20
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVEKA 118
G P+LVT+N LING ++G ++IDG+ + G++++
Sbjct: 316 GISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLIDGYCRTGELDQG 375
Query: 119 FEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVIS 298
+++ M S P+L T++ LI+ L + + + A++LLR+++ + + P Y+ V+
Sbjct: 376 LKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLD 435
Query: 299 GYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLP 478
G+CK G + + EM G D TF +I G G M AL I ++M+S G +P
Sbjct: 436 GFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFDKMLSLGCVP 495
Query: 479 DDVTFASLIGGYSRLGDFDECMKI 550
DD+T + L + G E K+
Sbjct: 496 DDITISCLTSCLLKAGMVKEAYKV 519
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum tuberosum]
gi|565370447|ref|XP_006351832.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum tuberosum]
Length = 550
Score = 189 bits (479), Expect = 6e-46
Identities = 98/185 (52%), Positives = 124/185 (67%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD T+NT+I GLCRVG V+KAFE F M S GC PD VTYNTLINGL
Sbjct: 213 PDTCTFNTVIRGLCRVGG------------VDKAFEFFNDMGSFGCFPDTVTYNTLINGL 260
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
C VG+ + A+ LL ++ Q SPDVVTY+SVI+GYCKLG+M+ +L EM GI P+
Sbjct: 261 CSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLGRMDEAINLMDEMTTYGISPN 320
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
+ TFN +I+GF KIG+M SA+++ RM + G PD VTF SLI GY R G+ D+ +K+ D
Sbjct: 321 LVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWD 380
Query: 557 EMNKR 571
EMN R
Sbjct: 381 EMNTR 385
Score = 118 bits (295), Expect = 1e-24
Identities = 79/252 (31%), Positives = 113/252 (44%), Gaps = 65/252 (25%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQV 109
S GC PD VTYNTLINGLC VG+ ++I G+ K G++
Sbjct: 243 SFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLGRM 302
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSE-----FSPDV 274
++A + M + G P+LVT+N LING ++G D+ IQ + PDV
Sbjct: 303 DEAINLMDEMTTYGISPNLVTFNILINGFGKIG------DMFSAIQMYGRMCAVGYPPDV 356
Query: 275 VTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF---------------------- 388
VT++S+I GYC+ G+++ L+ EM + P++YTF
Sbjct: 357 VTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEARELLRQ 416
Query: 389 --------------NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLG 526
N ++DGF K G ++ A I M S G D +TF LI G+ G
Sbjct: 417 LKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTILILGHCMKG 476
Query: 527 DFDECMKILDEM 562
E M I D+M
Sbjct: 477 RMLEAMAIFDKM 488
Score = 102 bits (254), Expect = 7e-20
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVEKA 118
G P+LVT+N LING ++G ++IDG+ + G++++
Sbjct: 316 GISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQG 375
Query: 119 FEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVIS 298
+++ M + P+L T++ LI+ L + + + A++LLR+++ + + P Y+ V+
Sbjct: 376 LKLWDEMNTRNLSPNLYTFSILISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLD 435
Query: 299 GYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLP 478
G+CK G + + EM G D TF +I G G M A+ I ++M+S G +P
Sbjct: 436 GFCKAGNLSKANVIAAEMESRGCCHDKITFTILILGHCMKGRMLEAMAIFDKMLSLGCVP 495
Query: 479 DDVTFASLIGGYSRLGDFDECMKI 550
DD+T + L + G E K+
Sbjct: 496 DDITVSCLTSCLLKAGMVKEAYKV 519
>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Fragaria vesca subsp. vesca]
Length = 583
Score = 188 bits (477), Expect = 1e-45
Identities = 93/189 (49%), Positives = 124/189 (65%)
Frame = +2
Query: 5 SGCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTL 184
S C PD T+N LI GLCR G V+K E F+ M+S GC P++VTYNTL
Sbjct: 244 SYCCPDSWTFNILIRGLCRTGA------------VDKGLEFFSDMRSFGCSPNVVTYNTL 291
Query: 185 INGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCG 364
I+GLCR + D DLLRE+Q++SE SPDV+T++SVISGYCKLG+ME ++F EM+ CG
Sbjct: 292 ISGLCRAHEVDRGCDLLREVQFRSELSPDVITFTSVISGYCKLGRMEEASAIFDEMIGCG 351
Query: 365 IMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECM 544
+ P TFNA+IDG+ K G+M+SA + E M+ G D +TF SLI GY R G + +
Sbjct: 352 LKPTAVTFNALIDGYGKAGDMSSAFSLYESMLFHGHCADVITFTSLIDGYCRAGHLNHGL 411
Query: 545 KILDEMNKR 571
++ EMN +
Sbjct: 412 QLWHEMNAK 420
Score = 116 bits (291), Expect = 4e-24
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 24/214 (11%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQV 109
S GC P++VTYNTLI+GLCR + ++I G+ K G++
Sbjct: 278 SFGCSPNVVTYNTLISGLCRAHEVDRGCDLLREVQFRSELSPDVITFTSVISGYCKLGRM 337
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
E+A IF M G P VT+N LI+G + G A L + + + DV+T++S
Sbjct: 338 EEASAIFDEMIGCGLKPTAVTFNALIDGYGKAGDMSSAFSLYESMLFHGHCA-DVITFTS 396
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSG 469
+I GYC+ G + + L+HEM + P YTF+ +I+ K + A + + S
Sbjct: 397 LIDGYCRAGHLNHGLQLWHEMNAKNVSPSAYTFSVLINALCKGNRLCEARDLLRELKGSN 456
Query: 470 VLPDDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
V+P + +I G + G+ DE I+ EM ++
Sbjct: 457 VVPKSFLYNPVIDGLCKAGNIDEANLIVAEMEEK 490
Score = 92.4 bits (228), Expect = 7e-17
Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVEKA 118
G P VT+N LI+G + G ++IDG+ +AG +
Sbjct: 351 GLKPTAVTFNALIDGYGKAGDMSSAFSLYESMLFHGHCADVITFTSLIDGYCRAGHLNHG 410
Query: 119 FEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVIS 298
+++ M + P T++ LIN LC+ + A+DLLRE++ S P Y+ VI
Sbjct: 411 LQLWHEMNAKNVSPSAYTFSVLINALCKGNRLCEARDLLRELK-GSNVVPKSFLYNPVID 469
Query: 299 GYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLP 478
G CK G ++ + EM + PD TF +I G + G M+ A+ +M+S G P
Sbjct: 470 GLCKAGNIDEANLIVAEMEEKKCTPDRVTFTILILGNSMKGRMSEAIGNFSKMLSIGCAP 529
Query: 479 DDVTFASLIGGYSRLGDFDECMKI 550
D +T SLI S+ G E +I
Sbjct: 530 DKITIDSLISCLSKAGMPSEAGRI 553
Score = 70.9 bits (172), Expect = 2e-10
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 23/167 (13%)
Frame = +2
Query: 20 DLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVEKAFEIF 130
D++T+ +LI+G CR G + +I+ K ++ +A ++
Sbjct: 390 DVITFTSLIDGYCRAGHLNHGLQLWHEMNAKNVSPSAYTFSVLINALCKGNRLCEARDLL 449
Query: 131 TIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCK 310
+K S P YN +I+GLC+ G D A ++ E++ + + +PD VT++ +I G
Sbjct: 450 RELKGSNVVPKSFLYNPVIDGLCKAGNIDEANLIVAEME-EKKCTPDRVTFTILILGNSM 508
Query: 311 LGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRE 451
G+M F +ML G PD T +++I +K G + A +I++
Sbjct: 509 KGRMSEAIGNFSKMLSIGCAPDKITIDSLISCLSKAGMPSEAGRIKK 555
Score = 68.2 bits (165), Expect = 1e-09
Identities = 46/181 (25%), Positives = 85/181 (46%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TY+ L+ LC++G + A +F M++ G P+ L++ ++G
Sbjct: 147 TYHYLLRSLCQMGLQ------------DSAKLVFDYMRTDGLSPNESVLEFLVSSCAQMG 194
Query: 209 KADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF 388
++D A+ +L E+ + S Y+++ + KL +++ LF + + PD +TF
Sbjct: 195 RSDLAEKILDEV-HCSVVGLSSFVYNNLFNVLVKLNRVDEAVCLFRKYVGSYCCPDSWTF 253
Query: 389 NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEMNK 568
N +I G + G + L+ M S G P+ VT+ +LI G R + D +L E+
Sbjct: 254 NILIRGLCRTGAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRAHEVDRGCDLLREVQF 313
Query: 569 R 571
R
Sbjct: 314 R 314
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 186 bits (472), Expect = 4e-45
Identities = 90/184 (48%), Positives = 122/184 (66%)
Frame = +2
Query: 20 DLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLC 199
D ++N LI GLCR+GK V+KAFE+F M+ GC PD++TYNTLING C
Sbjct: 236 DSCSFNILIRGLCRIGK------------VDKAFELFNEMRGFGCSPDVITYNTLINGFC 283
Query: 200 RVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDV 379
RV + D DLL+E+ +++ SPDVVTY+S+ISGYCKLGKME LF+ M+ GI P+
Sbjct: 284 RVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNA 343
Query: 380 YTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDE 559
+TFN +I+GF K+G+M SA + E M+ G PD +TF SLI G+ R G + +K+ E
Sbjct: 344 FTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHE 403
Query: 560 MNKR 571
+N R
Sbjct: 404 LNAR 407
Score = 118 bits (296), Expect = 1e-24
Identities = 76/244 (31%), Positives = 110/244 (45%), Gaps = 59/244 (24%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQVEK 115
GC PD++TYNTLING CRV + +II G+ K G++EK
Sbjct: 267 GCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEK 326
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A +F M SSG P+ T+N LING +VG A+++ E+ PD++T++S+I
Sbjct: 327 ASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLG-CPPDIITFTSLI 385
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTF----------------------------- 388
G+C+ GK+E L+HE+ + P+ YTF
Sbjct: 386 DGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIV 445
Query: 389 ------NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKI 550
N +IDGF K G + A I M PD +T+ LI G+ G E + I
Sbjct: 446 AQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISI 505
Query: 551 LDEM 562
+ M
Sbjct: 506 FNRM 509
Score = 79.0 bits (193), Expect = 8e-13
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVEKA 118
GC PD++T+ +LI+G CR GK A + + K ++ +A
Sbjct: 373 GCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEA 432
Query: 119 FEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVIS 298
+K YN +I+G C+ G D A +L E++ + PD +TY+ +I
Sbjct: 433 RGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEME-EKRCKPDKITYTILII 491
Query: 299 GYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRE 451
G+C G++ S+F+ ML G PD T ++I K G A +I +
Sbjct: 492 GHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQ 542
Score = 55.5 bits (132), Expect = 1e-05
Identities = 35/162 (21%), Positives = 74/162 (45%)
Frame = +2
Query: 77 IIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQS 256
++ ++ G E A ++ M G PD L++ GK + A+ + +++
Sbjct: 143 LLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGVEFS- 201
Query: 257 EFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSA 436
+V Y+ +++ + +++ F E + D +FN +I G +IG++ A
Sbjct: 202 -----LVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKA 256
Query: 437 LKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
++ M G PD +T+ +LI G+ R+ + D +L E+
Sbjct: 257 FELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKEL 298
>gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]
Length = 732
Score = 185 bits (470), Expect = 6e-45
Identities = 95/185 (51%), Positives = 124/185 (67%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD T+N LI GLC VGK V AFE F M GC PD++TYNTLI+GL
Sbjct: 397 PDTWTFNILIRGLCGVGK------------VHTAFEFFKDMGKFGCSPDVITYNTLISGL 444
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
CR + D DLLRE+Q +S+ SPDVVT++SVISGYCKLG+M+ LF EM++ GI P+
Sbjct: 445 CRNNEVDRGFDLLREVQSKSKLSPDVVTFTSVISGYCKLGQMKEASFLFDEMINFGIKPN 504
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
+TFNA+IDGF K G+M SA+ +M+ G PD V+F SLI GY R+G+ ++ +K+
Sbjct: 505 TFTFNALIDGFGKAGDMASAITFFAKMLFHGYHPDVVSFTSLIDGYCRVGNLNQGLKLWR 564
Query: 557 EMNKR 571
EMN+R
Sbjct: 565 EMNER 569
Score = 150 bits (379), Expect = 2e-34
Identities = 84/189 (44%), Positives = 107/189 (56%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNT 181
+S P T+N LI GLC + V AFE M GC PD+VTYNT
Sbjct: 251 NSRFRPSTWTFNILIQGLCGIR------------DVYTAFEFLNEMGKLGCSPDIVTYNT 298
Query: 182 LINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDC 361
LI+GLC+ D +LLRE+Q +SE SPD VT++SVISGYCKLG+M SLF EM++
Sbjct: 299 LISGLCKTNDVDRGCNLLRELQSRSELSPDAVTFTSVISGYCKLGRMSEASSLFAEMINS 358
Query: 362 GIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDEC 541
GI P TFNA+IDG AK G+M SA+ + R ++ PD TF LI G +G
Sbjct: 359 GIKPAAATFNALIDGHAKAGDMASAVCLFRRNMTLHFQPDTWTFNILIRGLCGVGKVHTA 418
Query: 542 MKILDEMNK 568
+ +M K
Sbjct: 419 FEFFKDMGK 427
Score = 118 bits (296), Expect = 1e-24
Identities = 71/210 (33%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQVEK 115
GC PD+VTYNTLI+GLC+ ++I G+ K G++ +
Sbjct: 288 GCSPDIVTYNTLISGLCKTNDVDRGCNLLRELQSRSELSPDAVTFTSVISGYCKLGRMSE 347
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A +F M +SG P T+N LI+G + G A L R F PD T++ +I
Sbjct: 348 ASSLFAEMINSGIKPAAATFNALIDGHAKAGDMASAVCLFRR-NMTLHFQPDTWTFNILI 406
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALK-IRERMVSSGV 472
G C +GK+ F +M G PDV T+N +I G + E+ +RE S +
Sbjct: 407 RGLCGVGKVHTAFEFFKDMGKFGCSPDVITYNTLISGLCRNNEVDRGFDLLREVQSKSKL 466
Query: 473 LPDDVTFASLIGGYSRLGDFDECMKILDEM 562
PD VTF S+I GY +LG E + DEM
Sbjct: 467 SPDVVTFTSVISGYCKLGQMKEASFLFDEM 496
Score = 108 bits (269), Expect = 1e-21
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 24/209 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCR------------------------VGKAAIIDGFAKAGQVEK 115
GC PD++TYNTLI+GLCR V ++I G+ K GQ+++
Sbjct: 429 GCSPDVITYNTLISGLCRNNEVDRGFDLLREVQSKSKLSPDVVTFTSVISGYCKLGQMKE 488
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A +F M + G P+ T+N LI+G + G A ++ + + PDVV+++S+I
Sbjct: 489 ASFLFDEMINFGIKPNTFTFNALIDGFGKAGDMASAITFFAKMLFHG-YHPDVVSFTSLI 547
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVL 475
GYC++G + L+ EM + + P+ YTF+ +I + + A +++ + ++
Sbjct: 548 DGYCRVGNLNQGLKLWREMNERSVRPNGYTFSVLIHALCRNNRLHEARDFLKQLSCTNII 607
Query: 476 PDDVTFASLIGGYSRLGDFDECMKILDEM 562
P+ + ++ G+ + G+ DE I+ M
Sbjct: 608 PEPFIYNPIVDGFCKAGNVDEANMIVAGM 636
Score = 108 bits (269), Expect = 1e-21
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVEKAFEI 127
PD+VT+ ++I+G C++G+ A+IDGF KAG + A
Sbjct: 468 PDVVTFTSVISGYCKLGQMKEASFLFDEMINFGIKPNTFTFNALIDGFGKAGDMASAITF 527
Query: 128 FTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYC 307
F M G HPD+V++ +LI+G CRVG + L RE+ +S P+ T+S +I C
Sbjct: 528 FAKMLFHGYHPDVVSFTSLIDGYCRVGNLNQGLKLWREMNERS-VRPNGYTFSVLIHALC 586
Query: 308 KLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDV 487
+ ++ ++ I+P+ + +N I+DGF K G + A I M G PD V
Sbjct: 587 RNNRLHEARDFLKQLSCTNIIPEPFIYNPIVDGFCKAGNVDEANMIVAGMEGKGCKPDKV 646
Query: 488 TFASLIGGYSRLGDFDECMKILDEM 562
TF LI G G E + + ++M
Sbjct: 647 TFTILIIGNCMKGRMLEAIGVFNKM 671
Score = 69.3 bits (168), Expect = 7e-10
Identities = 49/183 (26%), Positives = 82/183 (44%)
Frame = +2
Query: 23 LVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCR 202
L +YN L+ LC++G + A +F KS G PD L+ +
Sbjct: 153 LSSYNYLMRSLCQMGLH------------DSAKFVFDCFKSDGHLPDSSIVEFLLCSHAQ 200
Query: 203 VGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVY 382
VG+ D + LL E++ +V Y+++++ K K+ LF + ++ P +
Sbjct: 201 VGRLDLVEKLLDELRRDGIIVSSIV-YNNLLNVLVKQNKVCEAVCLFRKHMNSRFRPSTW 259
Query: 383 TFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
TFN +I G I ++ +A + M G PD VT+ +LI G + D D +L E+
Sbjct: 260 TFNILIQGLCGIRDVYTAFEFLNEMGKLGCSPDIVTYNTLISGLCKTNDVDRGCNLLREL 319
Query: 563 NKR 571
R
Sbjct: 320 QSR 322
>ref|XP_007204825.1| hypothetical protein PRUPE_ppa004064mg [Prunus persica]
gi|462400356|gb|EMJ06024.1| hypothetical protein
PRUPE_ppa004064mg [Prunus persica]
Length = 532
Score = 185 bits (470), Expect = 6e-45
Identities = 94/186 (50%), Positives = 122/186 (65%)
Frame = +2
Query: 14 HPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLING 193
H D T+N LI GLCR+G +++KAFE F+ M+S GC+PD+VTYNTLI+G
Sbjct: 218 HCDSWTFNILIRGLCRIG------------EIDKAFEFFSDMESFGCYPDIVTYNTLISG 265
Query: 194 LCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMP 373
LCR + D LL+E+Q + E SPDV+T++SVISGYCKLGKME LF EM + G+ P
Sbjct: 266 LCRANEVDRGCHLLKEVQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMNNSGVGP 325
Query: 374 DVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKIL 553
TFNA+IDGF K G M SA + E+M+ G PD +TF SLI GY R G + +K+
Sbjct: 326 TSVTFNALIDGFGKSGNMISARAMYEKMLFHGYRPDVITFTSLIDGYCRAGKLSQGLKLW 385
Query: 554 DEMNKR 571
EMN +
Sbjct: 386 QEMNAK 391
Score = 103 bits (258), Expect = 2e-20
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 71/246 (28%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQV 109
S GC+PD+VTYNTLI+GLCR + ++I G+ K G++
Sbjct: 249 SFGCYPDIVTYNTLISGLCRANEVDRGCHLLKEVQSRIELSPDVITFTSVISGYCKLGKM 308
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
E+A +F M +SG P VT+N LI+G + G A+ + ++ + + PDV+T++S
Sbjct: 309 EEASVLFDEMNNSGVGPTSVTFNALIDGFGKSGNMISARAMYEKMLFHG-YRPDVITFTS 367
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIID------------GFAKIGE--- 424
+I GYC+ GK+ L+ EM + P YTF+ +I+ GF K G
Sbjct: 368 LIDGYCRAGKLSQGLKLWQEMNAKNVSPSAYTFSVLINALCRENRLQEAHGFCKAGNVDE 427
Query: 425 --------------------------------MTSALKIRERMVSSGVLPDDVTFASLIG 508
M+ A+ ++M++ G PD++T SLI
Sbjct: 428 ANLIVAEMEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVDSLIS 487
Query: 509 GYSRLG 526
+ G
Sbjct: 488 CLMKAG 493
Score = 73.9 bits (180), Expect = 3e-11
Identities = 44/134 (32%), Positives = 67/134 (50%)
Frame = +2
Query: 170 TYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHE 349
TYN L+ LC++G D A+ L+ + +PD ++S Y ++GK+ E L E
Sbjct: 158 TYNFLLRSLCQIGLQDSAK-LVFDYMRSDGHTPDDSIAELLVSSYAQMGKLNNAEKLLDE 216
Query: 350 MLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGD 529
+ D +TFN +I G +IGE+ A + M S G PD VT+ +LI G R +
Sbjct: 217 -----VHCDSWTFNILIRGLCRIGEIDKAFEFFSDMESFGCYPDIVTYNTLISGLCRANE 271
Query: 530 FDECMKILDEMNKR 571
D +L E+ R
Sbjct: 272 VDRGCHLLKEVQSR 285
Score = 73.9 bits (180), Expect = 3e-11
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 35/185 (18%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVE 112
+SG P VT+N LI+G + G ++IDG+ +AG++
Sbjct: 320 NSGVGPTSVTFNALIDGFGKSGNMISARAMYEKMLFHGYRPDVITFTSLIDGYCRAGKLS 379
Query: 113 KAFEIFTIMKSSGCHPDLVTYNTLINGLCR------------VGKADGAQDLLREIQYQS 256
+ +++ M + P T++ LIN LCR G D A ++ E++ +
Sbjct: 380 QGLKLWQEMNAKNVSPSAYTFSVLINALCRENRLQEAHGFCKAGNVDEANLIVAEME-EK 438
Query: 257 EFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSA 436
SPD VT++ +I G C G+M S F +ML G PD T +++I K G A
Sbjct: 439 RCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVDSLISCLMKAGMPNEA 498
Query: 437 LKIRE 451
I++
Sbjct: 499 HHIKK 503
Score = 62.4 bits (150), Expect = 8e-08
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
P T++ LIN LCR + GF KAG V++A I M+ C PD VT+ LI G
Sbjct: 395 PSAYTFSVLINALCRENRLQEAHGFCKAGNVDEANLIVAEMEEKRCSPDKVTFTILILGN 454
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLG---KMEYVESLFHEMLDCGI 367
C G+ A +++ +PD +T S+IS K G + +++ + E L+ G+
Sbjct: 455 CMKGRMSEAISNFKKM-LAIGCAPDNITVDSLISCLMKAGMPNEAHHIKKIACEDLNLGM 513
Query: 368 MP 373
P
Sbjct: 514 SP 515
>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 532
Score = 183 bits (465), Expect = 2e-44
Identities = 95/185 (51%), Positives = 122/185 (65%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
P+ T+N LI GLCRVG +VEK FE+F M+S GC PD+VTYNTLI+GL
Sbjct: 196 PNTWTFNILIRGLCRVG------------EVEKGFELFNAMQSFGCLPDVVTYNTLISGL 243
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
C+ + D A DLL+E+Q +++ SPDV+TY+S+ISG+ KLGK+E LF EM+ GI P
Sbjct: 244 CKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPT 303
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
V TFN +IDGF KIG M +A + E+M S +PD VTF SLI GY R GD +K+ D
Sbjct: 304 VVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWD 363
Query: 557 EMNKR 571
M R
Sbjct: 364 VMKAR 368
Score = 114 bits (285), Expect = 2e-23
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGK------------------------AAIIDGFAKAGQV 109
S GC PD+VTYNTLI+GLC+ + +II GF K G++
Sbjct: 226 SFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKL 285
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
E A +F M SG P +VT+N LI+G ++G A+ + ++ S PDVVT++S
Sbjct: 286 EAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCI-PDVVTFTS 344
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSG 469
+I GYC+ G + ++ M + P++YT++ II+ K + A + ++ S
Sbjct: 345 LIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSD 404
Query: 470 VLPDDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
V P + +I G+ + G+ DE I+ EM ++
Sbjct: 405 VFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEK 438
Score = 108 bits (271), Expect = 8e-22
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Frame = +2
Query: 5 SGCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVEK 115
SG P +VT+N LI+G ++G ++IDG+ + G +
Sbjct: 298 SGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRL 357
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
+++ +MK+ P++ TY+ +IN LC+ + A+DLLR+++ F P Y+ VI
Sbjct: 358 GLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVF-PKPFIYNPVI 416
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVL 475
G+CK G ++ + EM + PD TF +I G G M AL I ++M++ G
Sbjct: 417 DGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCA 476
Query: 476 PDDVTFASLIGGYSRLGDFDECMKIL 553
PD++T +SL+ + G E I+
Sbjct: 477 PDNITISSLVACLLKAGKPSEAFHIV 502
Score = 75.1 bits (183), Expect = 1e-11
Identities = 51/181 (28%), Positives = 83/181 (45%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TY LI LC++G +++ + M+S G D L+ + G
Sbjct: 95 TYELLIRSLCQMGLHDLVE------------MVIGYMRSDGHLIDSRVLGFLVTSFAQAG 142
Query: 209 KADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF 388
K D A+ L+ E+Q + V Y+ +++ K GK+ LF E L P+ +TF
Sbjct: 143 KFDLAKKLIIEVQGEEARISSFV-YNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTF 201
Query: 389 NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEMNK 568
N +I G ++GE+ ++ M S G LPD VT+ +LI G + + D +L E+
Sbjct: 202 NILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQS 261
Query: 569 R 571
R
Sbjct: 262 R 262
>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 182 bits (461), Expect = 7e-44
Identities = 90/185 (48%), Positives = 121/185 (65%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD+ ++N LI GLCR+G +++KAFE F M + GC PD+V+YNTLING
Sbjct: 212 PDVYSFNILIRGLCRIG------------EIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 259
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
CRV + DLL+E SPDV+TY+S+ISGYCKLG M+ LF EM+ GI P+
Sbjct: 260 CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 319
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
+TFN +IDGF K+G M SA+ + E+M+ G LPD VTF SLI GY R G+ ++ +K+ +
Sbjct: 320 DFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWE 379
Query: 557 EMNKR 571
EM R
Sbjct: 380 EMKVR 384
Score = 115 bits (289), Expect = 6e-24
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 24/212 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGK------------------------AAIIDGFAKAGQVEK 115
GC PD+V+YNTLING CRV + +II G+ K G ++
Sbjct: 244 GCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKA 303
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A E+F M SSG P+ T+N LI+G +VG A ++ E PDVVT++S+I
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAM-VMYEKMLLLGCLPDVVTFTSLI 362
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVL 475
GYC+ G++ L+ EM + P+VYT+ +I+ K + A + SS V+
Sbjct: 363 DGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVV 422
Query: 476 PDDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
P + +I G+ + G DE I+ EM ++
Sbjct: 423 PKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK 454
Score = 105 bits (263), Expect = 6e-21
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVG--KAA---------------------IIDGFAKAGQVEKA 118
G PD++TY ++I+G C++G KAA +IDGF K G + A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339
Query: 119 FEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVIS 298
++ M GC PD+VT+ +LI+G CR G+ + L E++ ++ SP+V TY+ +I+
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRN-LSPNVYTYAVLIN 398
Query: 299 GYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLP 478
CK ++ + + ++P + +N +IDGF K G++ A I M P
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP 458
Query: 479 DDVTFASLIGGYSRLGDFDECMKILDEM 562
D +TF LI G G E + +M
Sbjct: 459 DKITFTILIIGNCMKGRMVEAISTFYKM 486
Score = 98.6 bits (244), Expect = 1e-18
Identities = 58/181 (32%), Positives = 91/181 (50%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLI 187
GC PD+VT+ +LI+G CR G+V + +++ MK P++ TY LI
Sbjct: 350 GCLPDVVTFTSLIDGYCR------------EGEVNQGLKLWEEMKVRNLSPNVYTYAVLI 397
Query: 188 NGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGI 367
N LC+ + A++ LR ++ SE P Y+ VI G+CK GK++ + EM +
Sbjct: 398 NALCKENRIREARNFLRHLK-SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKC 456
Query: 368 MPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMK 547
PD TF +I G G M A+ +M+ +PD++T SLI + G +E +
Sbjct: 457 RPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQ 516
Query: 548 I 550
I
Sbjct: 517 I 517
Score = 88.6 bits (218), Expect = 1e-15
Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TY+ L+ LC+VG ++ AK +F M+S G PD L++ R+G
Sbjct: 111 TYDLLMRNLCKVG----LNDSAKI--------VFDCMRSDGILPDSSILELLVSSYARMG 158
Query: 209 KADGAQDLLREIQ-YQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYT 385
K D A++ L E+ Y + SP V Y+++++ K ++ LF E L+ +PDVY+
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFV--YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS 216
Query: 386 FNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDE 559
FN +I G +IGE+ A + + M + G PD V++ +LI G+ R+ + + +L E
Sbjct: 217 FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE 274
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 182 bits (461), Expect = 7e-44
Identities = 90/185 (48%), Positives = 121/185 (65%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD+ ++N LI GLCR+G +++KAFE F M + GC PD+V+YNTLING
Sbjct: 212 PDVYSFNILIRGLCRIG------------EIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 259
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
CRV + DLL+E SPDV+TY+S+ISGYCKLG M+ LF EM+ GI P+
Sbjct: 260 CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 319
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
+TFN +IDGF K+G M SA+ + E+M+ G LPD VTF SLI GY R G+ ++ +K+ +
Sbjct: 320 DFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWE 379
Query: 557 EMNKR 571
EM R
Sbjct: 380 EMKVR 384
Score = 115 bits (289), Expect = 6e-24
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 24/212 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGK------------------------AAIIDGFAKAGQVEK 115
GC PD+V+YNTLING CRV + +II G+ K G ++
Sbjct: 244 GCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKA 303
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A E+F M SSG P+ T+N LI+G +VG A ++ E PDVVT++S+I
Sbjct: 304 ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAM-VMYEKMLLLGCLPDVVTFTSLI 362
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVL 475
GYC+ G++ L+ EM + P+VYT+ +I+ K + A + SS V+
Sbjct: 363 DGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVV 422
Query: 476 PDDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
P + +I G+ + G DE I+ EM ++
Sbjct: 423 PKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK 454
Score = 105 bits (263), Expect = 6e-21
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVG--KAA---------------------IIDGFAKAGQVEKA 118
G PD++TY ++I+G C++G KAA +IDGF K G + A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339
Query: 119 FEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVIS 298
++ M GC PD+VT+ +LI+G CR G+ + L E++ ++ SP+V TY+ +I+
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRN-LSPNVYTYAVLIN 398
Query: 299 GYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLP 478
CK ++ + + ++P + +N +IDGF K G++ A I M P
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP 458
Query: 479 DDVTFASLIGGYSRLGDFDECMKILDEM 562
D +TF LI G G E + +M
Sbjct: 459 DKITFTILIIGNCMKGRMVEAISTFYKM 486
Score = 98.6 bits (244), Expect = 1e-18
Identities = 58/181 (32%), Positives = 91/181 (50%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLI 187
GC PD+VT+ +LI+G CR G+V + +++ MK P++ TY LI
Sbjct: 350 GCLPDVVTFTSLIDGYCR------------EGEVNQGLKLWEEMKVRNLSPNVYTYAVLI 397
Query: 188 NGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGI 367
N LC+ + A++ LR ++ SE P Y+ VI G+CK GK++ + EM +
Sbjct: 398 NALCKENRIREARNFLRHLK-SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKC 456
Query: 368 MPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMK 547
PD TF +I G G M A+ +M+ +PD++T SLI + G +E +
Sbjct: 457 RPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQ 516
Query: 548 I 550
I
Sbjct: 517 I 517
Score = 88.6 bits (218), Expect = 1e-15
Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TY+ L+ LC+VG ++ AK +F M+S G PD L++ R+G
Sbjct: 111 TYDLLMRNLCKVG----LNDSAKI--------VFDCMRSDGILPDSSILELLVSSYARMG 158
Query: 209 KADGAQDLLREIQ-YQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYT 385
K D A++ L E+ Y + SP V Y+++++ K ++ LF E L+ +PDVY+
Sbjct: 159 KLDSAKNFLNEVHCYGIKVSPFV--YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS 216
Query: 386 FNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDE 559
FN +I G +IGE+ A + + M + G PD V++ +LI G+ R+ + + +L E
Sbjct: 217 FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE 274
>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
Length = 570
Score = 178 bits (451), Expect = 1e-42
Identities = 91/185 (49%), Positives = 118/185 (63%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
PD T+N LI GLC VG +V AFE F M C PD+VTYNTLI+GL
Sbjct: 235 PDTWTFNILIGGLCGVG------------EVHSAFEFFNDMGKFRCSPDVVTYNTLISGL 282
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
CR + D DLLRE+Q + +FSP+V T++SVI GYCKLG+ME +LF EM+D G P
Sbjct: 283 CRTNEVDRGCDLLREVQLRGDFSPNVRTFTSVILGYCKLGRMEEASALFDEMMDSGTRPT 342
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
TFN +ID F+K+G+M SA+ + E+M+ G PD VTF SLI GY R+G + +K+
Sbjct: 343 TVTFNVLIDAFSKVGDMASAIALYEKMLFHGYRPDVVTFTSLIDGYCRVGQLNRGLKLWC 402
Query: 557 EMNKR 571
EM+ R
Sbjct: 403 EMSVR 407
Score = 115 bits (288), Expect = 8e-24
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 24/211 (11%)
Frame = +2
Query: 11 CHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQVEKA 118
C PD+VTYNTLI+GLCR + ++I G+ K G++E+A
Sbjct: 268 CSPDVVTYNTLISGLCRTNEVDRGCDLLREVQLRGDFSPNVRTFTSVILGYCKLGRMEEA 327
Query: 119 FEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVIS 298
+F M SG P VT+N LI+ +VG A L ++ + + PDVVT++S+I
Sbjct: 328 SALFDEMMDSGTRPTTVTFNVLIDAFSKVGDMASAIALYEKMLFHG-YRPDVVTFTSLID 386
Query: 299 GYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLP 478
GYC++G++ L+ EM + P+ YT++ +I K+ + A + ++ + ++P
Sbjct: 387 GYCRVGQLNRGLKLWCEMSVRNVSPNGYTYSVVIHALCKVNRLHEARDLLRQLNCTNIVP 446
Query: 479 DDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
+ +I G+ + G+ DE I+ EM ++
Sbjct: 447 KPFMYNPVIDGFCKAGNVDEANMIVAEMEEK 477
Score = 79.0 bits (193), Expect = 8e-13
Identities = 57/181 (31%), Positives = 83/181 (45%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TYN LI LC++G + A +F M+ G PD T L+ +VG
Sbjct: 139 TYNLLIRSLCQMGFH------------DSAKFVFDCMRIDGHSPDNSTIEFLVCVFAKVG 186
Query: 209 KADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF 388
K D + LL EI+ S+F YSS+ + K K+ LF + + +PD +TF
Sbjct: 187 KLDSCEKLLEEIR-ASKF-----VYSSLFNVLVKNNKVYEAVCLFRKQIGSHFVPDTWTF 240
Query: 389 NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEMNK 568
N +I G +GE+ SA + M PD VT+ +LI G R + D +L E+
Sbjct: 241 NILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLISGLCRTNEVDRGCDLLREVQL 300
Query: 569 R 571
R
Sbjct: 301 R 301
Score = 78.6 bits (192), Expect = 1e-12
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGK-----------------------AAIIDGFAKAGQVEKA 118
G PD+VT+ +LI+G CRVG+ + +I K ++ +A
Sbjct: 373 GYRPDVVTFTSLIDGYCRVGQLNRGLKLWCEMSVRNVSPNGYTYSVVIHALCKVNRLHEA 432
Query: 119 FEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVIS 298
++ + + P YN +I+G C+ G D A ++ E++ + +PD +T++ +I
Sbjct: 433 RDLLRQLNCTNIVPKPFMYNPVIDGFCKAGNVDEANMIVAEME-EKRCNPDKMTFTILIL 491
Query: 299 GYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSS 466
G C G+M +F++ML G PD T + ++ K G A I+E ++ S
Sbjct: 492 GNCMKGRMVDAIGVFYKMLAVGCAPDKITVHCLMSCLLKAGMPNEAFHIKETVMKS 547
>ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Glycine max]
gi|571448762|ref|XP_006577947.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Glycine max]
gi|571448764|ref|XP_006577948.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X3 [Glycine max]
gi|571448766|ref|XP_006577949.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X4 [Glycine max]
Length = 510
Score = 175 bits (443), Expect = 9e-42
Identities = 85/185 (45%), Positives = 120/185 (64%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
P T N L+ GLCR AG++++AF + ++S GC PD++TYNTLI+GL
Sbjct: 174 PVTYTVNILMRGLCR------------AGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGL 221
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
CR+ + D A+ LL+E+ EF+PDVV+Y+++ISGYCK KME LF EM+ G P+
Sbjct: 222 CRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPN 281
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
+TFNA+I GF K+G+M SAL + E+M+ G +PD TF SLI GY RLG + M +
Sbjct: 282 TFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWH 341
Query: 557 EMNKR 571
+MN +
Sbjct: 342 KMNDK 346
Score = 111 bits (278), Expect = 1e-22
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQV 109
S GC PD++TYNTLI+GLCR+ + II G+ K ++
Sbjct: 204 SFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKM 263
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
E+ +F M SG P+ T+N LI G ++G A L ++ Q PDV T++S
Sbjct: 264 EEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQG-CVPDVATFTS 322
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSG 469
+I+GY +LG++ ++H+M D I +YTF+ ++ G + A I + S
Sbjct: 323 LINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNESD 382
Query: 470 VLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
++P + +I GY + G+ DE KI+ EM
Sbjct: 383 IVPQPFIYNPVIDGYCKSGNVDEANKIVAEM 413
Score = 100 bits (248), Expect = 4e-19
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVEKAFEI 127
PD+V+Y T+I+G C+ K A+I GF K G + A +
Sbjct: 245 PDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALAL 304
Query: 128 FTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYC 307
+ M GC PD+ T+ +LING R+G+ A D+ ++ + T+S ++SG C
Sbjct: 305 YEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMN-DKNIGATLYTFSVLVSGLC 363
Query: 308 KLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDV 487
++ + + + I+P + +N +IDG+ K G + A KI M + PD +
Sbjct: 364 NNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKL 423
Query: 488 TFASLIGGYSRLGDFDECMKILDEM 562
TF LI G+ G E + I +M
Sbjct: 424 TFTILIIGHCMKGRMPEAIGIFHKM 448
Score = 90.9 bits (224), Expect = 2e-16
Identities = 53/165 (32%), Positives = 83/165 (50%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLI 187
GC PD+ T+ +LING R+G QV +A +++ M L T++ L+
Sbjct: 312 GCVPDVATFTSLINGYFRLG------------QVHQAMDMWHKMNDKNIGATLYTFSVLV 359
Query: 188 NGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGI 367
+GLC + A+D+LR + +S+ P Y+ VI GYCK G ++ + EM
Sbjct: 360 SGLCNNNRLHKARDILRLLN-ESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRC 418
Query: 368 MPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASL 502
PD TF +I G G M A+ I +M++ G PD++T +L
Sbjct: 419 KPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNL 463
Score = 73.2 bits (178), Expect = 5e-11
Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +2
Query: 77 IIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQS 256
++ +A G+++ + E+ ++ + + V YN L N L R K A L RE+ +
Sbjct: 112 LVWSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFREL-IRL 170
Query: 257 EFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSA 436
+ P T + ++ G C+ G+++ L +++ G +PDV T+N +I G +I E+ A
Sbjct: 171 RYKPVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRA 230
Query: 437 LKIRERMVSSG-VLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
+ + + +G PD V++ ++I GY + +E + EM
Sbjct: 231 RSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEM 273
Score = 67.4 bits (163), Expect = 3e-09
Identities = 45/179 (25%), Positives = 82/179 (45%)
Frame = +2
Query: 26 VTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRV 205
+TY+ L+ LCR + A ++ M+ G PD L+ V
Sbjct: 72 LTYSLLLRSLCR------------SNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIV 119
Query: 206 GKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYT 385
G+ D +++LL ++Q + + V Y+ + + + K+ LF E++ P YT
Sbjct: 120 GRLDVSRELLADVQCNN-VGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYT 178
Query: 386 FNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
N ++ G + GE+ A ++ + S G LPD +T+ +LI G R+ + D +L E+
Sbjct: 179 VNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEV 237
>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 173 bits (439), Expect = 3e-41
Identities = 88/184 (47%), Positives = 116/184 (63%)
Frame = +2
Query: 20 DLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLC 199
D T+N LI GLC VGKA EKA E+ +M GC PD+VTYNTLI G C
Sbjct: 205 DTKTFNILIRGLCGVGKA------------EKALELLGVMSGFGCEPDIVTYNTLIQGFC 252
Query: 200 RVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDV 379
+ + + A ++ ++++ S SPDVVTY+S+ISGYCK GKM SL +ML GI P
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312
Query: 380 YTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDE 559
TFN ++DG+AK GEM +A +IR +M+S G PD VTF SLI GY R+G + ++ +E
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 560 MNKR 571
MN R
Sbjct: 373 MNAR 376
Score = 118 bits (295), Expect = 1e-24
Identities = 70/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Frame = +2
Query: 5 SGCHPDLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVEK 115
S C PD+VTY ++I+G C+ GK ++DG+AKAG++
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A EI M S GC PD+VT+ +LI+G CRVG+ L E+ + F P+ TYS +I
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF-PNAFTYSILI 389
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVL 475
+ C ++ L ++ I+P + +N +IDGF K G++ A I E M
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 476 PDDVTFASLIGGYSRLGDFDECMKILDEM 562
PD +TF LI G+ G E + I +M
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Score = 110 bits (274), Expect = 3e-22
Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 24/212 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCR------------------------VGKAAIIDGFAKAGQVEK 115
GC PD+VTYNTLI G C+ V ++I G+ KAG++ +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A + M G +P VT+N L++G + G+ A+++ ++ F PDVVT++S+I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF-PDVVTFTSLI 354
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVL 475
GYC++G++ L+ EM G+ P+ +T++ +I+ + A ++ ++ S ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 476 PDDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
P + +I G+ + G +E I++EM K+
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Score = 102 bits (255), Expect = 5e-20
Identities = 60/175 (34%), Positives = 88/175 (50%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNT 181
S GC PD+VT+ +LI+G CRVG QV + F ++ M + G P+ TY+
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVG------------QVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 182 LINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDC 361
LIN LC + A++LL ++ + P Y+ VI G+CK GK+ + EM
Sbjct: 388 LINALCNENRLLKARELLGQLA-SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 362 GIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLG 526
PD TF +I G G M A+ I +MV+ G PD +T +SL+ + G
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 63.5 bits (153), Expect = 4e-08
Identities = 49/178 (27%), Positives = 79/178 (44%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TYN L LC KAG + A ++F MKS G P+ L++ G
Sbjct: 105 TYNLLTRSLC------------KAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKG 152
Query: 209 KADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF 388
K A LL + E + +S+++ KL ++E LF E L D TF
Sbjct: 153 KLHFATALLLQ---SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTF 209
Query: 389 NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
N +I G +G+ AL++ M G PD VT+ +LI G+ + + ++ ++ ++
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
[Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 173 bits (439), Expect = 3e-41
Identities = 88/184 (47%), Positives = 116/184 (63%)
Frame = +2
Query: 20 DLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLC 199
D T+N LI GLC VGKA EKA E+ +M GC PD+VTYNTLI G C
Sbjct: 205 DTKTFNILIRGLCGVGKA------------EKALELLGVMSGFGCEPDIVTYNTLIQGFC 252
Query: 200 RVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDV 379
+ + + A ++ ++++ S SPDVVTY+S+ISGYCK GKM SL +ML GI P
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312
Query: 380 YTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDE 559
TFN ++DG+AK GEM +A +IR +M+S G PD VTF SLI GY R+G + ++ +E
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 560 MNKR 571
MN R
Sbjct: 373 MNAR 376
Score = 118 bits (295), Expect = 1e-24
Identities = 70/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Frame = +2
Query: 5 SGCHPDLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVEK 115
S C PD+VTY ++I+G C+ GK ++DG+AKAG++
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A EI M S GC PD+VT+ +LI+G CRVG+ L E+ + F P+ TYS +I
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF-PNAFTYSILI 389
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVL 475
+ C ++ L ++ I+P + +N +IDGF K G++ A I E M
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 476 PDDVTFASLIGGYSRLGDFDECMKILDEM 562
PD +TF LI G+ G E + I +M
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Score = 110 bits (274), Expect = 3e-22
Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 24/212 (11%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCR------------------------VGKAAIIDGFAKAGQVEK 115
GC PD+VTYNTLI G C+ V ++I G+ KAG++ +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 116 AFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVI 295
A + M G +P VT+N L++G + G+ A+++ ++ F PDVVT++S+I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF-PDVVTFTSLI 354
Query: 296 SGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVL 475
GYC++G++ L+ EM G+ P+ +T++ +I+ + A ++ ++ S ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 476 PDDVTFASLIGGYSRLGDFDECMKILDEMNKR 571
P + +I G+ + G +E I++EM K+
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Score = 102 bits (255), Expect = 5e-20
Identities = 60/175 (34%), Positives = 88/175 (50%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNT 181
S GC PD+VT+ +LI+G CRVG QV + F ++ M + G P+ TY+
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVG------------QVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 182 LINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDC 361
LIN LC + A++LL ++ + P Y+ VI G+CK GK+ + EM
Sbjct: 388 LINALCNENRLLKARELLGQLA-SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 362 GIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLG 526
PD TF +I G G M A+ I +MV+ G PD +T +SL+ + G
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 63.5 bits (153), Expect = 4e-08
Identities = 49/178 (27%), Positives = 79/178 (44%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TYN L LC KAG + A ++F MKS G P+ L++ G
Sbjct: 105 TYNLLTRSLC------------KAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKG 152
Query: 209 KADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF 388
K A LL + E + +S+++ KL ++E LF E L D TF
Sbjct: 153 KLHFATALLLQ---SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTF 209
Query: 389 NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
N +I G +G+ AL++ M G PD VT+ +LI G+ + + ++ ++ ++
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
>ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Glycine max]
Length = 581
Score = 172 bits (437), Expect = 4e-41
Identities = 85/185 (45%), Positives = 121/185 (65%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
P T N LI GLCRVG ++++AF++ ++S GC PD++TYNTLI+GL
Sbjct: 175 PVTYTVNILIRGLCRVG------------EIDEAFKLLKDLRSFGCLPDVITYNTLIHGL 222
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
C + + D A+ LLRE+ EF+PDVV+Y+ +ISGYCKL KME LF EM++ G P+
Sbjct: 223 CLINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPN 282
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
+TFNA+IDGF K+G+M SAL + +M+ G LPD TF SLI G+ R+ + M +
Sbjct: 283 TFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWH 342
Query: 557 EMNKR 571
+MN++
Sbjct: 343 KMNEK 347
Score = 102 bits (254), Expect = 7e-20
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVEKAFEI 127
PD+V+Y +I+G C++ K A+IDGF K G + A +
Sbjct: 246 PDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALAL 305
Query: 128 FTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYC 307
++ M GC PD+ T+ +LING RV + A D+ ++ + + TYS ++SG C
Sbjct: 306 YSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMN-EKNIGASLYTYSVLVSGLC 364
Query: 308 KLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDV 487
++ + + + I+P + +N +IDG+ K G + A KI M + PD +
Sbjct: 365 NNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKL 424
Query: 488 TFASLIGGYSRLGDFDECMKILDEM 562
TF LI G+ G E + D+M
Sbjct: 425 TFTILIIGHCMKGRMPEAIGFFDKM 449
Score = 101 bits (251), Expect = 2e-19
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQV 109
S GC PD++TYNTLI+GLC + + II G+ K ++
Sbjct: 205 SFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKM 264
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
E+ +F M +SG P+ T+N LI+G ++G A L ++ Q PDV T++S
Sbjct: 265 EEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGCL-PDVATFTS 323
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSG 469
+I+G+ ++ ++ ++H+M + I +YT++ ++ G + A I + S
Sbjct: 324 LINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESD 383
Query: 470 VLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
++P + +I GY + G+ DE KI+ EM
Sbjct: 384 IVPQPFIYNPVIDGYCKSGNVDEANKIVAEM 414
Score = 89.4 bits (220), Expect = 6e-16
Identities = 53/165 (32%), Positives = 82/165 (49%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLI 187
GC PD+ T+ +LING RV QV +A +++ M L TY+ L+
Sbjct: 313 GCLPDVATFTSLINGHFRVR------------QVHQAMDMWHKMNEKNIGASLYTYSVLV 360
Query: 188 NGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGI 367
+GLC + A+D+LR + +S+ P Y+ VI GYCK G ++ + EM
Sbjct: 361 SGLCNNNRLHKARDILRLLN-ESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRC 419
Query: 368 MPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASL 502
PD TF +I G G M A+ ++M++ G PD++T +L
Sbjct: 420 KPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNL 464
Score = 78.6 bits (192), Expect = 1e-12
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +2
Query: 77 IIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQS 256
++ +A G+++ + E+ ++ + + V YN L N L R K A L RE+ +
Sbjct: 113 LVSSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFREL-IRL 171
Query: 257 EFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSA 436
+ P T + +I G C++G+++ L ++ G +PDV T+N +I G I E+ A
Sbjct: 172 RYKPVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRA 231
Query: 437 LK-IRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
+RE ++ PD V++ +I GY +L +E + DEM
Sbjct: 232 RSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEM 274
Score = 70.5 bits (171), Expect = 3e-10
Identities = 46/179 (25%), Positives = 84/179 (46%)
Frame = +2
Query: 26 VTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRV 205
+TY+ L+ LCR + A ++ M+ G PD L++ V
Sbjct: 73 LTYSLLLRSLCR------------SNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIV 120
Query: 206 GKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYT 385
G+ D +++LL ++Q + + V Y+ + + + K+ LF E++ P YT
Sbjct: 121 GRLDVSRELLADVQCNN-VGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYT 179
Query: 386 FNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
N +I G ++GE+ A K+ + + S G LPD +T+ +LI G + + D +L E+
Sbjct: 180 VNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREV 238
>ref|XP_006581143.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Glycine max]
Length = 598
Score = 172 bits (437), Expect = 4e-41
Identities = 85/185 (45%), Positives = 121/185 (65%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGL 196
P T N LI GLCRVG ++++AF++ ++S GC PD++TYNTLI+GL
Sbjct: 175 PVTYTVNILIRGLCRVG------------EIDEAFKLLKDLRSFGCLPDVITYNTLIHGL 222
Query: 197 CRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPD 376
C + + D A+ LLRE+ EF+PDVV+Y+ +ISGYCKL KME LF EM++ G P+
Sbjct: 223 CLINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPN 282
Query: 377 VYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILD 556
+TFNA+IDGF K+G+M SAL + +M+ G LPD TF SLI G+ R+ + M +
Sbjct: 283 TFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWH 342
Query: 557 EMNKR 571
+MN++
Sbjct: 343 KMNEK 347
Score = 102 bits (254), Expect = 7e-20
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Frame = +2
Query: 17 PDLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVEKAFEI 127
PD+V+Y +I+G C++ K A+IDGF K G + A +
Sbjct: 246 PDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALAL 305
Query: 128 FTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYC 307
++ M GC PD+ T+ +LING RV + A D+ ++ + + TYS ++SG C
Sbjct: 306 YSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMN-EKNIGASLYTYSVLVSGLC 364
Query: 308 KLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDV 487
++ + + + I+P + +N +IDG+ K G + A KI M + PD +
Sbjct: 365 NNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKL 424
Query: 488 TFASLIGGYSRLGDFDECMKILDEM 562
TF LI G+ G E + D+M
Sbjct: 425 TFTILIIGHCMKGRMPEAIGFFDKM 449
Score = 101 bits (251), Expect = 2e-19
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKA------------------------AIIDGFAKAGQV 109
S GC PD++TYNTLI+GLC + + II G+ K ++
Sbjct: 205 SFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKM 264
Query: 110 EKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSS 289
E+ +F M +SG P+ T+N LI+G ++G A L ++ Q PDV T++S
Sbjct: 265 EEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGCL-PDVATFTS 323
Query: 290 VISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSG 469
+I+G+ ++ ++ ++H+M + I +YT++ ++ G + A I + S
Sbjct: 324 LINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESD 383
Query: 470 VLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
++P + +I GY + G+ DE KI+ EM
Sbjct: 384 IVPQPFIYNPVIDGYCKSGNVDEANKIVAEM 414
Score = 89.4 bits (220), Expect = 6e-16
Identities = 53/165 (32%), Positives = 82/165 (49%)
Frame = +2
Query: 8 GCHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLI 187
GC PD+ T+ +LING RV QV +A +++ M L TY+ L+
Sbjct: 313 GCLPDVATFTSLINGHFRVR------------QVHQAMDMWHKMNEKNIGASLYTYSVLV 360
Query: 188 NGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGI 367
+GLC + A+D+LR + +S+ P Y+ VI GYCK G ++ + EM
Sbjct: 361 SGLCNNNRLHKARDILRLLN-ESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRC 419
Query: 368 MPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASL 502
PD TF +I G G M A+ ++M++ G PD++T +L
Sbjct: 420 KPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNL 464
Score = 78.6 bits (192), Expect = 1e-12
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +2
Query: 77 IIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQS 256
++ +A G+++ + E+ ++ + + V YN L N L R K A L RE+ +
Sbjct: 113 LVSSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFREL-IRL 171
Query: 257 EFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSA 436
+ P T + +I G C++G+++ L ++ G +PDV T+N +I G I E+ A
Sbjct: 172 RYKPVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRA 231
Query: 437 LK-IRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
+RE ++ PD V++ +I GY +L +E + DEM
Sbjct: 232 RSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEM 274
Score = 70.5 bits (171), Expect = 3e-10
Identities = 46/179 (25%), Positives = 84/179 (46%)
Frame = +2
Query: 26 VTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRV 205
+TY+ L+ LCR + A ++ M+ G PD L++ V
Sbjct: 73 LTYSLLLRSLCR------------SNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIV 120
Query: 206 GKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYT 385
G+ D +++LL ++Q + + V Y+ + + + K+ LF E++ P YT
Sbjct: 121 GRLDVSRELLADVQCNN-VGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYT 179
Query: 386 FNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
N +I G ++GE+ A K+ + + S G LPD +T+ +LI G + + D +L E+
Sbjct: 180 VNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREV 238
>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
gi|565479514|ref|XP_006297397.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566105|gb|EOA30294.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566106|gb|EOA30295.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
Length = 535
Score = 172 bits (435), Expect = 7e-41
Identities = 89/187 (47%), Positives = 114/187 (60%)
Frame = +2
Query: 11 CHPDLVTYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLIN 190
C D T+N LI GLC VGK EKA E+ M GC PD+VTYNTLI
Sbjct: 203 CCNDTKTFNILIRGLCSVGKG------------EKALELLGEMSGFGCSPDIVTYNTLIK 250
Query: 191 GLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIM 370
G C+ + A ++L +++ S SPDVVTY+S+ISGYCK GKM+ L +ML GI
Sbjct: 251 GFCKSNELAKANEMLNDVKSSSGCSPDVVTYTSMISGYCKAGKMQEAYLLLDDMLGLGIY 310
Query: 371 PDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKI 550
P TFN ++DG+AK GEMTSA IR +M+S G PD VTF SLI GY R G ++ ++
Sbjct: 311 PTTITFNVLVDGYAKAGEMTSAEDIRGKMISFGCFPDVVTFTSLIDGYCRAGQVNQGFRL 370
Query: 551 LDEMNKR 571
+EMN +
Sbjct: 371 WEEMNAK 377
Score = 116 bits (291), Expect = 4e-24
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 23/210 (10%)
Frame = +2
Query: 2 SSGCHPDLVTYNTLINGLCRVGKA-----------------------AIIDGFAKAGQVE 112
SSGC PD+VTY ++I+G C+ GK ++DG+AKAG++
Sbjct: 271 SSGCSPDVVTYTSMISGYCKAGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMT 330
Query: 113 KAFEIFTIMKSSGCHPDLVTYNTLINGLCRVGKADGAQDLLREIQYQSEFSPDVVTYSSV 292
A +I M S GC PD+VT+ +LI+G CR G+ + L E+ + P+ TYS +
Sbjct: 331 SAEDIRGKMISFGCFPDVVTFTSLIDGYCRAGQVNQGFRLWEEMNAKGML-PNEFTYSIL 389
Query: 293 ISGYCKLGKMEYVESLFHEMLDCGIMPDVYTFNAIIDGFAKIGEMTSALKIRERMVSSGV 472
I+ CK + L ++ I+ + +N +IDGF K G++ A I E M
Sbjct: 390 INALCKENSLLKARELLGQLASKDIITKPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 449
Query: 473 LPDDVTFASLIGGYSRLGDFDECMKILDEM 562
PD +TF LI G+ G E + I +M
Sbjct: 450 KPDKITFTILIIGHCMKGRMFEAVSIFHKM 479
Score = 65.5 bits (158), Expect = 1e-08
Identities = 50/178 (28%), Positives = 83/178 (46%)
Frame = +2
Query: 29 TYNTLINGLCRVGKAAIIDGFAKAGQVEKAFEIFTIMKSSGCHPDLVTYNTLINGLCRVG 208
TYN L LC KAG + A ++F M+S G P+ L++ G
Sbjct: 106 TYNVLTRSLC------------KAGMHDLAGQMFECMRSDGVSPNSRLLGFLVSSFAEKG 153
Query: 209 KADGAQDLLREIQYQSEFSPDVVTYSSVISGYCKLGKMEYVESLFHEMLDCGIMPDVYTF 388
K A LL + Y+ E VV +S+++ KL +++ LF + L D TF
Sbjct: 154 KLQFATALLLQ-SYEVERCCMVV--NSLLNTLVKLDRVDDAMKLFDKHLRFQCCNDTKTF 210
Query: 389 NAIIDGFAKIGEMTSALKIRERMVSSGVLPDDVTFASLIGGYSRLGDFDECMKILDEM 562
N +I G +G+ AL++ M G PD VT+ +LI G+ + + + ++L+++
Sbjct: 211 NILIRGLCSVGKGEKALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEMLNDV 268