BLASTX nr result
ID: Mentha28_contig00011811
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha28_contig00011811 (3854 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus... 1999 0.0 gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise... 1878 0.0 ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 1736 0.0 ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub... 1734 0.0 ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a... 1691 0.0 ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub... 1680 0.0 ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 1678 0.0 emb|CBI21137.3| unnamed protein product [Vitis vinifera] 1647 0.0 ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 1624 0.0 ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob... 1618 0.0 ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 1602 0.0 ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 1595 0.0 ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun... 1591 0.0 ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub... 1578 0.0 ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub... 1574 0.0 ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 1568 0.0 gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum... 1567 0.0 ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a... 1554 0.0 gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n... 1550 0.0 ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV a... 1542 0.0 >gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus] Length = 1211 Score = 1999 bits (5179), Expect = 0.0 Identities = 964/1210 (79%), Positives = 1078/1210 (89%), Gaps = 4/1210 (0%) Frame = -1 Query: 3749 WDFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEADCVLQEVDKGFLKAFCKK 3570 WDFLEEAGPSS + DKFS G+T+M E D +QE+ +GFLK C+K Sbjct: 4 WDFLEEAGPSSKN--DKFSNGTTQMDIDEDIEFDSSESEDELDTAMQELSEGFLKVSCRK 61 Query: 3569 ASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDPSKRGDGEWRRATLKF 3390 ASTAFF+QYGLISHQINS+NDF +HGIQ++FDSIGE+V+EPGYDPSK+G+G+W+RA LKF Sbjct: 62 ASTAFFDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKKGEGDWKRACLKF 121 Query: 3389 GKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQVYTEGLSRS 3210 GKVTL+ PTFWTGEKFSS DGAKDYL+LLPRHA LQNMTY+++IKVETHLQVYT+GL+RS Sbjct: 122 GKVTLERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVETHLQVYTKGLNRS 181 Query: 3209 DKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEERDCEFDQGGYFVIKGA 3030 DKF TGV+ VEKT+LNEYH EVNFGRLPVMVKSDLCWM +++DCEFDQGGYFVIKGA Sbjct: 182 DKFTTGVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCWMKSLDKKDCEFDQGGYFVIKGA 241 Query: 3029 EKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPKVEHLVAGEKILTAYFYV 2850 EKTFIAQEQ+CLKRLWV K P+W+++YRPV++R RV+IK+VPK+EH++ +KILT YFYV Sbjct: 242 EKTFIAQEQLCLKRLWVTKIPSWTVSYRPVARRNRVYIKLVPKMEHVIGADKILTVYFYV 301 Query: 2849 AEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDADKKFDGFRKGGNAIKH 2670 EI VW++FFALG+PND+EVVKLI LD E+ DIANIL+ SI+DADKK++GFRK GN+ KH Sbjct: 302 TEISVWVLFFALGIPNDKEVVKLIDLDIEDSDIANILIASIYDADKKYEGFRKEGNSSKH 361 Query: 2669 IKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRGRRKVDNRDD 2490 IKELMQ C++PPTES+E+LI YLFPHL + QKA FL YMVKCLLEAY+GRRKV+NRDD Sbjct: 362 IKELMQNCKFPPTESIEDLIKNYLFPHLKTPIQKACFLGYMVKCLLEAYKGRRKVENRDD 421 Query: 2489 MRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDASIITNGLSR 2310 RNK RVHIKHAERRM KAMQRDLY+DREVQSID YLDASI+TNGLSR Sbjct: 422 FRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREVQSIDQYLDASIVTNGLSR 481 Query: 2309 AFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGDARYPHPSHW 2130 AFSTGAW HPFKRMER +GVVA++RRTNPLQA+ D+R+TRQQVSYTGRVGDARYPHPSHW Sbjct: 482 AFSTGAWCHPFKRMERTSGVVATIRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSHW 541 Query: 2129 GKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESGME-LVDDTSCLLNGKH 1953 GKVCFLSTPDGENCGLVKNLASLG+VSTN+L NLLKKF + GME +VDDTS LL GKH Sbjct: 542 GKVCFLSTPDGENCGLVKNLASLGLVSTNLLAQGNLLKKFQQCGMEKMVDDTSNLLGGKH 601 Query: 1952 RVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILRPLF 1773 +VFLDGDW+G+CKDSSSFV+KLRR+RR++E+P+Q+EIKRD+H+GEVRIF D+GRILRPL Sbjct: 602 KVFLDGDWIGICKDSSSFVSKLRRKRRRMEIPHQMEIKRDQHNGEVRIFNDSGRILRPLL 661 Query: 1772 VVQNLKKIKDLKGHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVKYSH 1593 VVQNLKKIKDLKG+FSFQSLL +GI+E IG EEEEDCQTAWG+ YLFTAELENPPVKY+H Sbjct: 662 VVQNLKKIKDLKGNFSFQSLLDNGIIELIGAEEEEDCQTAWGVRYLFTAELENPPVKYTH 721 Query: 1592 CEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQLYYP 1413 CE DSSFLLGLS GI+PF NHDHARRVLYQS KHSQQAIGYSTTN IRVDTNSH LYYP Sbjct: 722 CELDSSFLLGLSCGIVPFTNHDHARRVLYQSEKHSQQAIGYSTTNSIIRVDTNSHSLYYP 781 Query: 1412 QRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNRASL 1233 QR LFRT+LSD LG+S +SDH+KGM+PRP+F+NGQCAIVA+NVHLGYNQEDSLVMNR+SL Sbjct: 782 QRPLFRTVLSDSLGRSTFSDHYKGMIPRPEFYNGQCAIVAINVHLGYNQEDSLVMNRSSL 841 Query: 1232 ERGMFRTEHVRSYKAEVENSEG-AGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIGAN 1056 ERGMFRTEHVRS+KA+VENSE GK++K DE+VSFGK+QSKIGRVDSL+DDGFPYIGAN Sbjct: 842 ERGMFRTEHVRSFKADVENSEAVGGKKVKMDEMVSFGKMQSKIGRVDSLEDDGFPYIGAN 901 Query: 1055 LQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCLGDK 876 LQTGDIVIGKHAA GVDHSIKLKHTE+GMV KVVLSANDEGKNFAVVSLRQVR+PCLGDK Sbjct: 902 LQTGDIVIGKHAATGVDHSIKLKHTEKGMVHKVVLSANDEGKNFAVVSLRQVRSPCLGDK 961 Query: 875 FSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 696 FSSMHGQKGVLGFLESQENFPF++ GIVPDIVINPHAFPSRQTPGQ Sbjct: 962 FSSMHGQKGVLGFLESQENFPFSQQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGG 1021 Query: 695 XLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLTHMA 516 LKYATPFS+PSVEDITAQLHRLG+SRWGGERVYDGRTGEKV SLIFMGPTFYQRLTHMA Sbjct: 1022 GLKYATPFSSPSVEDITAQLHRLGFSRWGGERVYDGRTGEKVNSLIFMGPTFYQRLTHMA 1081 Query: 515 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 336 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ Sbjct: 1082 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 1141 Query: 335 MHICRKCKKMANVIQRPVF--GGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMG 162 MHICRKCK MANVIQRP GGRKIRGP+CR CESVEDVVRVNVPYGAKLLCQELFSMG Sbjct: 1142 MHICRKCKNMANVIQRPGSGGGGRKIRGPFCRVCESVEDVVRVNVPYGAKLLCQELFSMG 1201 Query: 161 ISLSFDTELC 132 ISL FDTELC Sbjct: 1202 ISLKFDTELC 1211 >gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea] Length = 1205 Score = 1878 bits (4866), Expect = 0.0 Identities = 910/1206 (75%), Positives = 1044/1206 (86%), Gaps = 4/1206 (0%) Frame = -1 Query: 3737 EEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEADCVLQEVDKGFLKAFCKKASTA 3558 ++ GPS+S +DK G+T M + D +Q++D+G +K+FC+KA+T+ Sbjct: 2 DDVGPSTS--KDKLFNGNTFMDIDEDIDFDLSDSDDDIDNAMQDLDEGVVKSFCRKAATS 59 Query: 3557 FFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDPSKRGD-GEWRRATLKFGKV 3381 FFEQ+GLISHQ+NS+N+F +HGI QLF SIGE+++EPGYDPSKRGD GEW++A+LKFGKV Sbjct: 60 FFEQHGLISHQLNSYNNFINHGIHQLFASIGEIIVEPGYDPSKRGDDGEWQKASLKFGKV 119 Query: 3380 TLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQV-YTEGLSRSDK 3204 L+ P+FWTGEKFSSA+GAKD L+L P+HA LQNMTY++RIKVETHL+V YTEGL RS+K Sbjct: 120 NLERPSFWTGEKFSSAEGAKDNLELHPKHARLQNMTYAARIKVETHLEVVYTEGLVRSEK 179 Query: 3203 FKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEERDCEFDQGGYFVIKGAEK 3024 F TGV T V++T L E+NFG+LPVMV SDLCW+ ++DCEFDQGGYF+IKGAEK Sbjct: 180 FTTGVSTHVQRTTLKSLSLEINFGKLPVMVNSDLCWLKSTGKKDCEFDQGGYFIIKGAEK 239 Query: 3023 TFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPKVEHLVAGEKILTAYFYVAE 2844 TFIAQEQICLKRLWV+K+PTW+I+YRP++KR+R+++K+VPKVE GEKILT YF E Sbjct: 240 TFIAQEQICLKRLWVSKDPTWTISYRPITKRRRIYLKLVPKVESAPVGEKILTVYFSFVE 299 Query: 2843 IPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDADKKFDGFRKGGNAIKHIK 2664 +P+W++FFALG ND+EVVK+I +D E+ IANIL+ SIHDAD K++GFRK G+AIKH+K Sbjct: 300 MPIWILFFALGARNDKEVVKMIDMDIEDSAIANILLASIHDADSKYEGFRKNGSAIKHLK 359 Query: 2663 ELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRGRRKVDNRDDMR 2484 +LMQ +YPPTESVEE +LFPHL S QKA FLAYMVKCLLE Y+GRRKVDNRDD+R Sbjct: 360 DLMQEGKYPPTESVEEYFQIHLFPHLKSSVQKACFLAYMVKCLLECYKGRRKVDNRDDLR 419 Query: 2483 NKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAF 2304 NK R+ IKHAERRM+++MQRDL K R++Q+IDHYLDASIITNGLSRAF Sbjct: 420 NKRLELAGELLERELRIQIKHAERRMMRSMQRDLDKGRDLQTIDHYLDASIITNGLSRAF 479 Query: 2303 STGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGDARYPHPSHWGK 2124 STGAW HP+KRMERI+G+VA+LRRTNPLQA+ D+R+TRQQVSYTGRVGDARYPHPSHWGK Sbjct: 480 STGAWSHPYKRMERISGIVATLRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSHWGK 539 Query: 2123 VCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESGME-LVDDTSCLLNGKHRV 1947 +CFLSTPDGENCGLVKNLASLG+VST +L+ LLKKF E GME L DDTS LL+GKH++ Sbjct: 540 ICFLSTPDGENCGLVKNLASLGLVSTEVLDQEGLLKKFRECGMEQLADDTSSLLDGKHKI 599 Query: 1946 FLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILRPLFVV 1767 FLDGD VGVC+DSSSFV+ LRRRR+K EVP+Q+EIK D+ +GEVR+FADAGRILRPL VV Sbjct: 600 FLDGDLVGVCRDSSSFVSMLRRRRQKNEVPHQVEIKMDQSNGEVRVFADAGRILRPLLVV 659 Query: 1766 QNLKKIKDLKGHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVKYSHCE 1587 +NL+KI DLK H FQSLL GIVE IGPEEEEDCQTAWG YLF AELENPPVKYSHCE Sbjct: 660 RNLRKINDLKSHVFFQSLLDVGIVELIGPEEEEDCQTAWGTKYLFMAELENPPVKYSHCE 719 Query: 1586 FDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQLYYPQR 1407 DSSFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+STT+P+IRVDTNSHQLYYPQ+ Sbjct: 720 LDSSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTSPNIRVDTNSHQLYYPQK 779 Query: 1406 SLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNRASLER 1227 LFRT+LSDCLGK S KG++P P FFNGQCAIVAVNVHLGYNQEDSLVMNRASLER Sbjct: 780 PLFRTVLSDCLGKLTDSCRRKGIIPLPPFFNGQCAIVAVNVHLGYNQEDSLVMNRASLER 839 Query: 1226 GMFRTEHVRSYKAEVENSEGAG-KRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIGANLQ 1050 GMFR+EHVRSYK++V+NSE A K+ KAD+++SFGK+QSKIGRVDSLD+DGFPY+GANLQ Sbjct: 840 GMFRSEHVRSYKSDVDNSEAAPVKKFKADDLISFGKVQSKIGRVDSLDEDGFPYVGANLQ 899 Query: 1049 TGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCLGDKFS 870 TGDIVIGK A GVDHSIKLKHTERGMVQKV+LSA+DEG+N+AVVSLRQVR+PCLGDKFS Sbjct: 900 TGDIVIGKCTATGVDHSIKLKHTERGMVQKVILSADDEGRNYAVVSLRQVRSPCLGDKFS 959 Query: 869 SMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXL 690 SMHGQKGVLGFLESQENFPF + GIVPDIVINPHAFPSRQTPGQ L Sbjct: 960 SMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGGL 1019 Query: 689 KYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTFYQRLTHMAED 510 KYATPFS+PSVEDITAQLHRLG+SRWG E+VYDGRTGE ++SLIFMGPTFYQRLTHMAED Sbjct: 1020 KYATPFSSPSVEDITAQLHRLGFSRWGAEKVYDGRTGEALKSLIFMGPTFYQRLTHMAED 1079 Query: 509 KVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMH 330 KVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMH Sbjct: 1080 KVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMH 1139 Query: 329 ICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGISLS 150 ICRKCK MANVIQRPVFGGRK+RGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGISL Sbjct: 1140 ICRKCKNMANVIQRPVFGGRKVRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGISLK 1199 Query: 149 FDTELC 132 FDTE+C Sbjct: 1200 FDTEIC 1205 >ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Solanum tuberosum] Length = 1217 Score = 1736 bits (4496), Expect = 0.0 Identities = 856/1220 (70%), Positives = 997/1220 (81%), Gaps = 15/1220 (1%) Frame = -1 Query: 3746 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD-----------CVLQEVD 3600 D +EE G SS ++K S GS RM + D +++E+ Sbjct: 5 DIMEEVGCSSG--KEKISNGSARMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELG 62 Query: 3599 KGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDPSKRGD 3420 + +LK FCKKAST FFE+YGLISHQINS+NDF ++GIQ++FDS+GE+ +EPGYDPSKRGD Sbjct: 63 ETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 122 Query: 3419 GEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHL 3240 G+W+ A++KFGKVTL+ P FW GEKFS ADG K+YLDLLPRHA LQNMTYS+RI VETH+ Sbjct: 123 GDWKHASVKFGKVTLERPKFWAGEKFS-ADGGKEYLDLLPRHARLQNMTYSARIMVETHV 181 Query: 3239 QVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEERDCEFD 3060 QVYT+ L RSDKFKTGVD V+K E +V GR+PVMV S+LCWM+ ++ DCEFD Sbjct: 182 QVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFD 241 Query: 3059 QGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLV 2886 GGYF++KGAEKTFIAQEQ+CLKRLWV+ PTW + YRP KRKRV+IK+ K+EH+ Sbjct: 242 HGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIK 301 Query: 2885 AGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDADKKF 2706 GEK L+ Y +AE+P+W++FFALGV +DREVV LI +D E+ I NIL+ SIH+ADK Sbjct: 302 GGEKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNC 360 Query: 2705 DGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEA 2526 + FRKG A+ ++ L++ C++PP ESVEE I+ YLFP+L+ QKA FL YMVKCLL + Sbjct: 361 EDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHS 420 Query: 2525 YRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHY 2346 + GRRKVDNRDD RNK R HIKHAERRMVKAMQRDLY DR+VQ I+HY Sbjct: 421 FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHY 480 Query: 2345 LDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGR 2166 LDASIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ D+R++RQQV+YTG+ Sbjct: 481 LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGK 540 Query: 2165 VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESGME-L 1989 VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+G+VST IL+ L+ GM+ L Sbjct: 541 VGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKL 598 Query: 1988 VDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRI 1809 VDD + L+GK +V LDG+WVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+ GEVRI Sbjct: 599 VDDCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 658 Query: 1808 FADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLF 1632 F+D+GRILRPL VV NLKKIK LKG + FQSLL +GI+EFIGPEEEEDC+TAWG++Y+ Sbjct: 659 FSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYIL 718 Query: 1631 TAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPS 1452 A+ ENPP KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+ST NP+ Sbjct: 719 KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 778 Query: 1451 IRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGY 1272 RVDTN+HQLYYPQR LFRTML+D LGK + + + KGM+PRP++FNGQCAIVAVNVHLGY Sbjct: 779 NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGY 838 Query: 1271 NQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDS 1092 NQEDSLVMNRASLERGMFR+EHVRSYKAEV+N E K+LK ++ V+FGK QSKIGRVDS Sbjct: 839 NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDS 898 Query: 1091 LDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVS 912 LDDDGFP+IGANLQ+GDI+IGK A +G DHS+KLKHTERGMVQKV+LSANDEGKNFAVVS Sbjct: 899 LDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVS 958 Query: 911 LRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXX 732 LRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF GIVPDIVINPHAFPSRQTPGQ Sbjct: 959 LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 1018 Query: 731 XXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFM 552 KYATPFST SV+ I QL G++RWG ERVY+GRTGE V SLIFM Sbjct: 1019 EAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFM 1078 Query: 551 GPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 372 GPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL Sbjct: 1079 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 1138 Query: 371 HERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAK 192 HERLFTLSDSSQMHIC KCK MANVIQR V GG K+RGP+CRFCESVED+V+VNVPYGAK Sbjct: 1139 HERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAK 1197 Query: 191 LLCQELFSMGISLSFDTELC 132 LLCQELFSMGISL FDTE+C Sbjct: 1198 LLCQELFSMGISLKFDTEIC 1217 >ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum lycopersicum] Length = 1217 Score = 1734 bits (4492), Expect = 0.0 Identities = 856/1220 (70%), Positives = 995/1220 (81%), Gaps = 15/1220 (1%) Frame = -1 Query: 3746 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD-----------CVLQEVD 3600 D +EE G SS ++K S GSTRM + D +++E+ Sbjct: 5 DIMEEVGCSSG--KEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELG 62 Query: 3599 KGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDPSKRGD 3420 + FLK FCKKAST FFE+YGLISHQINS+NDF ++GIQ++FDS+GE+ +EPGYDPSKRGD Sbjct: 63 ESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 122 Query: 3419 GEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHL 3240 G+W+ A++KFGKVTL+ P FW GEKFS DG K+YLDLLPRHA LQNMTYS+RI VETH+ Sbjct: 123 GDWKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLLPRHARLQNMTYSARIMVETHV 181 Query: 3239 QVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEERDCEFD 3060 QVYT+ L RSDKFKTGVD V+K E +V GR+PVMV S+LCWM+ ++ DCEFD Sbjct: 182 QVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFD 241 Query: 3059 QGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLV 2886 GGYF++KGAEKTFIAQEQ+CLKRLWV+ PTW + YRP KRKRV+IK+ K+EH+ Sbjct: 242 HGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIK 301 Query: 2885 AGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDADKKF 2706 GEK L+ Y +AE+P+W++FFALGV +DREVV LI +D E+ I NIL+ SIH+ADK Sbjct: 302 GGEKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNC 360 Query: 2705 DGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEA 2526 + FRKG A+ ++ L++ C++PP ESVEE I+ YLFP+L+ QKA FL YMVKCLL + Sbjct: 361 EDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHS 420 Query: 2525 YRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHY 2346 + GRRKVDNRDD RNK R HIKHAERRMVKAMQRDLY DR+VQ I+HY Sbjct: 421 FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHY 480 Query: 2345 LDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGR 2166 LDASIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ D+R++RQQV+YTG+ Sbjct: 481 LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGK 540 Query: 2165 VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESGME-L 1989 VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+G+VST IL+ L+ GM+ L Sbjct: 541 VGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKL 598 Query: 1988 VDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRI 1809 VDD S L+GK +V LDG+WVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+ GEVRI Sbjct: 599 VDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 658 Query: 1808 FADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLF 1632 F+D GRILRPL VV NLKKIK LKG + FQSLL +GI+E IGPEEEEDC+TAWG++Y+ Sbjct: 659 FSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYIL 718 Query: 1631 TAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPS 1452 A+ ENPP KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+ST NP+ Sbjct: 719 KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 778 Query: 1451 IRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGY 1272 RVDTN+HQLYYPQR LFRTML+D LGK + + + KGM+PRP++FNGQCAIVAVNVHLGY Sbjct: 779 NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGY 838 Query: 1271 NQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDS 1092 NQEDSLVMNRASLERGMFR+EHVRSYKAEV+N E K+LK ++ V+FGK QSKIGRVDS Sbjct: 839 NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDS 898 Query: 1091 LDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVS 912 LDDDGFP+IGANLQ+GDI+IGK + +G DHS+KLKHTERGMVQKV+LSANDEGKNFAVVS Sbjct: 899 LDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVS 958 Query: 911 LRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXX 732 LRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF GIVPDIVINPHAFPSRQTPGQ Sbjct: 959 LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 1018 Query: 731 XXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFM 552 KYATPFST SV+ I QL G++RWG ERVY+GRTGE V SLIFM Sbjct: 1019 EAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFM 1078 Query: 551 GPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 372 GPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL Sbjct: 1079 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 1138 Query: 371 HERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAK 192 HERLFTLSDSSQMHIC KCK MANVIQR V GG K+RGP+CRFCESVED+V+VNVPYGAK Sbjct: 1139 HERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAK 1197 Query: 191 LLCQELFSMGISLSFDTELC 132 LLCQELFSMGISL FDTE+C Sbjct: 1198 LLCQELFSMGISLKFDTEIC 1217 >ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Solanum tuberosum] Length = 1219 Score = 1691 bits (4380), Expect = 0.0 Identities = 835/1222 (68%), Positives = 981/1222 (80%), Gaps = 17/1222 (1%) Frame = -1 Query: 3746 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD---------CVLQEVDKG 3594 D +E+ G SS + K S GST M + D ++E+ G Sbjct: 5 DIMEDVGCSSG--KAKTSNGSTMMDFDIDGLFEVEDYDWDEDEDEDDNLDMTSIKELGGG 62 Query: 3593 FLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDPSKRGDGE 3414 FL+ FCKKAS FFE+YG+ISHQI+S+NDF +GIQ++FDS+GE+ +EPGYDPSK+G+GE Sbjct: 63 FLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGE 122 Query: 3413 WRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQV 3234 W+ A++KFGKVTLD P FW GEKFS+ +G ++YLDL PRHA LQNMTYS+RI VETH+QV Sbjct: 123 WKHASVKFGKVTLDRPKFWAGEKFSAYNG-EEYLDLWPRHARLQNMTYSARIIVETHVQV 181 Query: 3233 YTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEERDCEFDQG 3054 +T+ L RSDKFKTGV+ V+K + E +V GR+PVMV S+LCWMS + DC+FD G Sbjct: 182 FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDHG 241 Query: 3053 GYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLVAG 2880 GYF++KGAEK FIAQEQICLKRLWV+ TW +AYR KR RV++K+ K EH+ Sbjct: 242 GYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGE 301 Query: 2879 EKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDADKKFDG 2700 K L+ YF +AE+P+W++FFALGV +DRE+V LI +D ++ +I NIL+ SIHDADK + Sbjct: 302 AKALSVYF-LAEMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDADKNCED 360 Query: 2699 FRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYR 2520 FRKG A+ ++ L++ C++PP ESVEE I YLFP+L+ QKA FL YMVKCLL +Y Sbjct: 361 FRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYI 420 Query: 2519 GRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLD 2340 GRRKVDNRDD RNK R HIKHAERRMVKA+QRDL DR+VQ ++HYLD Sbjct: 421 GRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPLEHYLD 480 Query: 2339 ASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVG 2160 ASIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ DLR+TRQQV+YTG+VG Sbjct: 481 ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVG 540 Query: 2159 DARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESGME-LVD 1983 DARYPHPSHWGKVCFLSTPDGENCGLVKNLAS+G+VST +L+ LL+ GM+ LVD Sbjct: 541 DARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKP--LLETLFRCGMQKLVD 598 Query: 1982 DTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFA 1803 D++ L+GK +V LDGDWVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+ EVRIF+ Sbjct: 599 DSATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFS 658 Query: 1802 DAGRILRPLFVVQNLKKIKDLK-----GHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDY 1638 DAGRI+RPL VV NLK IK LK G + FQ+LL GI+E IGPEEEEDC+TAWG++Y Sbjct: 659 DAGRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEY 718 Query: 1637 LFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTN 1458 L A+ ENPPV Y+HCE D SFLLGLS G+IPFANHDHARRVLYQS KHSQQAIG+ST N Sbjct: 719 LLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVN 778 Query: 1457 PSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHL 1278 P+ RVDTN+HQLYYPQR LF TMLSD LGK + H KGM+ RP+++NGQCAIVAVNVHL Sbjct: 779 PNARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNVHL 838 Query: 1277 GYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRV 1098 GYNQEDS+VMNRASLERGMFR+EHVRSYKAEV+N E GK+ K ++ V+FGK QSKIGRV Sbjct: 839 GYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVEDSVNFGKTQSKIGRV 898 Query: 1097 DSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAV 918 DSLDDDGFP+IGANLQ+GDI+IGK+A +G DHS+K+KHTERGMVQKV+LSAND+GKNFAV Sbjct: 899 DSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNFAV 958 Query: 917 VSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQ 738 VSLRQVR+PCLGDKFSSMHGQKGVLG+LESQENFPF GIVPDIVINPHAFPSRQTPGQ Sbjct: 959 VSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQ 1018 Query: 737 XXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLI 558 KYATPFS SV+ I QLH G+SRWG ERVY+GRTGE V SLI Sbjct: 1019 LLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEMVHSLI 1078 Query: 557 FMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA 378 FMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA Sbjct: 1079 FMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA 1138 Query: 377 NLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYG 198 NLHERLFTLSDSSQMHIC KCK MANVIQR GG KIRGP+CRFCESVED+V+V+VPYG Sbjct: 1139 NLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFCESVEDIVKVDVPYG 1197 Query: 197 AKLLCQELFSMGISLSFDTELC 132 AKLLCQELFSMGISL FDTE+C Sbjct: 1198 AKLLCQELFSMGISLKFDTEIC 1219 >ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum lycopersicum] Length = 1219 Score = 1680 bits (4350), Expect = 0.0 Identities = 828/1221 (67%), Positives = 977/1221 (80%), Gaps = 16/1221 (1%) Frame = -1 Query: 3746 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD---------CVLQEVDKG 3594 D +E+ G SS + K S GST M + D ++E+ G Sbjct: 5 DIMEDVGCSSG--KGKTSNGSTMMDFDIDGLFEVGDYDWDDDEDEDDNLDMASIKELGGG 62 Query: 3593 FLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDPSKRGDGE 3414 FL+ FCKKAS FFE+YGLISHQI+S+NDF +GIQ++FDS+GE+ +EPGYDPSK+G+GE Sbjct: 63 FLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGE 122 Query: 3413 WRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQV 3234 W+ A++KFG V LD P FW GEK+S+ +G ++YL++ PRHA LQNMTYS+RI VETH+QV Sbjct: 123 WKHASVKFGNVILDRPKFWAGEKYSAYNG-EEYLNMWPRHARLQNMTYSARIIVETHVQV 181 Query: 3233 YTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEERDCEFDQG 3054 +T+ L RSDKFKTGV+ V+K + E +V GR+PVMV S+LCWMS + DCEFD G Sbjct: 182 FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDHG 241 Query: 3053 GYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPKVEH-LVAGE 2877 GYF++KGAEK FIAQEQ+CLKRLWV+ TW +AYR KR RV++K+ ++H + GE Sbjct: 242 GYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNRVYLKLTETLKHEQIKGE 301 Query: 2876 KILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDADKKFDGF 2697 + +++AE+P+W++FFALGV +DREVV LI +D +++ I NIL+ SIHDADK + F Sbjct: 302 AKSLSVYFLAEMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADKNCEDF 361 Query: 2696 RKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRG 2517 RKG A+ ++ L++ C++PP ESVEE I YLFP+L+ QKA FL YMVKCLL +Y G Sbjct: 362 RKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIG 421 Query: 2516 RRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDA 2337 RRKVDNRDD RNK RVHIKHAERRMVKA+QRDL DR+V I+HYLDA Sbjct: 422 RRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIEHYLDA 481 Query: 2336 SIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGD 2157 SIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ DLR+TRQQV+YTG+VGD Sbjct: 482 SIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGD 541 Query: 2156 ARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESGME-LVDD 1980 ARYP+PSHWGKVCFLSTPDGENCGLVKNLAS+G+VST +L LL+ GM+ LVDD Sbjct: 542 ARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVL--MPLLETLFRCGMQKLVDD 599 Query: 1979 TSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFAD 1800 + L+GK +V LDGDWVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+ EVRIF+D Sbjct: 600 CATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSD 659 Query: 1799 AGRILRPLFVVQNLKKIKDLKG-----HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYL 1635 AGRI+RPL VV NLK IK L G + FQ+LL GI+E IGPEEEEDC+TAWG++YL Sbjct: 660 AGRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYL 719 Query: 1634 FTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNP 1455 A+ ENPPV Y+HCE D SFLLGLS G+IPFANHDHARRVLYQS KHSQQAIG+ST NP Sbjct: 720 LKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNP 779 Query: 1454 SIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLG 1275 +IRVDTN+HQLYYPQR LF TMLSD LGK + + H +GM+ RP+++NGQCAIVAVNVHLG Sbjct: 780 NIRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNVHLG 839 Query: 1274 YNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVD 1095 YNQEDS+VMNRASLERGMFR+EHVRSYKAEV+N E GK+ KA++ V+FGK QSKIGRVD Sbjct: 840 YNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAEDSVNFGKTQSKIGRVD 899 Query: 1094 SLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVV 915 LDDDG PYIGANLQ+GDI+IGK A +G DHS+K+KHTE+GMVQKV+LSANDEGKNFAVV Sbjct: 900 CLDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNFAVV 959 Query: 914 SLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQX 735 SLRQVR+PCLGDKFSSMHGQKGVLG+LESQENFPF GIVPDIVINPHAFPSRQTPGQ Sbjct: 960 SLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQL 1019 Query: 734 XXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIF 555 KYATPFS SV+ I QLH G+SRWG ERVY+GRTGE V SLIF Sbjct: 1020 LEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNERVYNGRTGEMVHSLIF 1079 Query: 554 MGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN 375 MGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN Sbjct: 1080 MGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN 1139 Query: 374 LHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGA 195 LHERLFTLSDSSQMHIC KCK MANVIQRPV GG K+RGP+CRFCESVED+V+V VPYGA Sbjct: 1140 LHERLFTLSDSSQMHICGKCKNMANVIQRPVPGG-KVRGPFCRFCESVEDIVKVGVPYGA 1198 Query: 194 KLLCQELFSMGISLSFDTELC 132 KLLCQELFSMGISL FDTE+C Sbjct: 1199 KLLCQELFSMGISLKFDTEIC 1219 >ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis vinifera] Length = 1198 Score = 1678 bits (4346), Expect = 0.0 Identities = 823/1169 (70%), Positives = 967/1169 (82%), Gaps = 8/1169 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 + +++K +LK FCKK + +FF +YGLI HQINSFNDF +GIQ++FDS GE+ +EPGYDP Sbjct: 38 IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 97 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SKRG+G+WR A+++FGKVTL+ P W GE +DG K+ L+ LPRHA LQNMTYSSR+K Sbjct: 98 SKRGEGDWRYASVRFGKVTLERPRVWAGE----SDG-KESLNFLPRHARLQNMTYSSRMK 152 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDT-VVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEE 3078 + H QVYT+ L RSDK+KTG D VEK ++ E + ++ GR+PVMVKS+LCWM+ E Sbjct: 153 AQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVER 212 Query: 3077 RDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP-K 2901 DCE+D GGYF+IKGAEKTFIAQEQICLKRLWV+ PTW +AYRP+ KRKRV++K+ P K Sbjct: 213 GDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPK 272 Query: 2900 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHD 2721 E+ GEK+LT YF EIP+W++FFALG +D+EVV LI + ++ I+NIL+ SIH+ Sbjct: 273 DENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHE 332 Query: 2720 ADKKFDG----FRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 2553 AD++ + FR+ GNAI + +L++ C++PP ES++E IS YLFP+ + QKA FL Sbjct: 333 ADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLG 392 Query: 2552 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 2373 YMVKCLL+AY GRRK DNRDD RNK RVHI+HAERRMVKAMQR+LY D Sbjct: 393 YMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGD 452 Query: 2372 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 2193 R+++ I++YLDASIITNGLSRAFSTG W HPFKRMERI+GVVA+LRRTNPLQ D+R+T Sbjct: 453 RDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKT 512 Query: 2192 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKK 2013 RQQV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA G+VST +L+ L+ K Sbjct: 513 RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDP--LVDK 570 Query: 2012 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1836 + GME LVDDTS L+GK++VFLDGDWVGVC+D SFV +LR +RR E+P Q+EIKR Sbjct: 571 LFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKR 630 Query: 1835 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQ 1659 D+ GEVRIF+DAGRILRPL VV+NLKK+K KG F+FQSLL GIVE IG EEEEDC Sbjct: 631 DEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCS 690 Query: 1658 TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 1479 TAWGI YL ++PPVKY+HCE D SFLLGLS GIIP+ANHDHARRVLYQS KHSQQA Sbjct: 691 TAWGIKYLLKGH-DDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQA 749 Query: 1478 IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 1299 IG+STTNP+IRVDT SHQLYYPQR LFRTM+SDCLGK YS+ HKG+VPRP++FNGQ AI Sbjct: 750 IGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAI 809 Query: 1298 VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 1119 VAVNVHLGYNQEDSLVMNRASLERGMFR+EH+RSYK+EV+N+E K+ K+++ V FGK+ Sbjct: 810 VAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKM 869 Query: 1118 QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 939 QSKIGRVDSLDDDGFP+IGANLQ GDIVIG+ A +GVDHSIKLKHTERGMVQKVV+SAND Sbjct: 870 QSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSAND 929 Query: 938 EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 759 +GKNFAVVSLRQVR PCLGDKFSSMHGQKGVLGFLESQENFPF GIVPDIVINPHAFP Sbjct: 930 DGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 989 Query: 758 SRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTG 579 SRQTPGQ L++ATPFST SV+ I QLHR G+SRWG ERVY+GRTG Sbjct: 990 SRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTG 1049 Query: 578 EKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 399 E + SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCL Sbjct: 1050 EMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCL 1109 Query: 398 IAHGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVV 219 IAHGAAANLHERLFTLSDS+ MHICR+CK ++NVIQR V GGRK+RGPYCR+CES E++V Sbjct: 1110 IAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIV 1169 Query: 218 RVNVPYGAKLLCQELFSMGISLSFDTELC 132 +VNVPYGAKLLCQELFSMGISL F+T+LC Sbjct: 1170 KVNVPYGAKLLCQELFSMGISLKFETQLC 1198 >emb|CBI21137.3| unnamed protein product [Vitis vinifera] Length = 1220 Score = 1647 bits (4266), Expect = 0.0 Identities = 813/1169 (69%), Positives = 956/1169 (81%), Gaps = 8/1169 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 + +++K +LK FCKK + +FF +YGLI HQINSFNDF +GIQ++FDS GE+ +EPGYDP Sbjct: 74 IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 133 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SKRG+G+WR A+++FGKVTL+ P W GE +DG K+ L+ LPRHA LQNMTYSSR+K Sbjct: 134 SKRGEGDWRYASVRFGKVTLERPRVWAGE----SDG-KESLNFLPRHARLQNMTYSSRMK 188 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDT-VVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEE 3078 + H QVYT+ L RSDK+KTG D VEK ++ E + ++ GR+PVMVKS+LCWM+ E Sbjct: 189 AQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVER 248 Query: 3077 RDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP-K 2901 DCE+D GGYF+IKGAEKTFIAQEQICLKRLWV+ PTW +AYRP+ KRKRV++K+ P K Sbjct: 249 GDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPK 308 Query: 2900 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHD 2721 E+ GEK+LT YF EIP+W++FFALG +D+EVV LI + ++ I+NIL+ SIH+ Sbjct: 309 DENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHE 368 Query: 2720 ADKKFDG----FRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 2553 AD++ + FR+ GNAI + +L++ C++PP ES++E IS YLFP+ + QKA FL Sbjct: 369 ADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLG 428 Query: 2552 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 2373 YMVKCLL+AY GRRK DNRDD RNK RVHI+HAERRMVKAMQR+LY D Sbjct: 429 YMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGD 488 Query: 2372 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 2193 R+++ I++YLDASIITNGLSRAFSTG W HPFKRMERI+GVVA+LRRTNPLQ D+R+T Sbjct: 489 RDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKT 548 Query: 2192 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKK 2013 RQQV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA G+VST +L+ L+ K Sbjct: 549 RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDP--LVDK 606 Query: 2012 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1836 + GME LVDDTS L+GK++VFLDGDWVGVC+D SFV +LR +RR E+P Q+EIKR Sbjct: 607 LFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKR 666 Query: 1835 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQ 1659 D+ GEVRIF+DAGRILRPL VV+NLKK+K KG F+FQSLL GIVE IG EEEEDC Sbjct: 667 DEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCS 726 Query: 1658 TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 1479 TAWGI YL ++PPVKY+HCE D SFLLGLS GIIP+ANHDHARRVLYQS KHSQQA Sbjct: 727 TAWGIKYLLKGH-DDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQA 785 Query: 1478 IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 1299 IG+STTNP+IRVDT SHQLYYPQR LFRTM+SD +PRP++FNGQ AI Sbjct: 786 IGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISD--------------LPRPEYFNGQIAI 831 Query: 1298 VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 1119 VAVNVHLGYNQEDSLVMNRASLERGMFR+EH+RSYK+EV+N+E K+ K+++ V FGK+ Sbjct: 832 VAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKM 891 Query: 1118 QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 939 QSKIGRVDSLDDDGFP+IGANLQ GDIVIG+ A +GVDHSIKLKHTERGMVQKVV+SAND Sbjct: 892 QSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSAND 951 Query: 938 EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 759 +GKNFAVVSLRQVR PCLGDKFSSMHGQKGVLGFLESQENFPF GIVPDIVINPHAFP Sbjct: 952 DGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 1011 Query: 758 SRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTG 579 SRQTPGQ L++ATPFST SV+ I QLHR G+SRWG ERVY+GRTG Sbjct: 1012 SRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTG 1071 Query: 578 EKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 399 E + SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCL Sbjct: 1072 EMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCL 1131 Query: 398 IAHGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVV 219 IAHGAAANLHERLFTLSDS+ MHICR+CK ++NVIQR V GGRK+RGPYCR+CES E++V Sbjct: 1132 IAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIV 1191 Query: 218 RVNVPYGAKLLCQELFSMGISLSFDTELC 132 +VNVPYGAKLLCQELFSMGISL F+T+LC Sbjct: 1192 KVNVPYGAKLLCQELFSMGISLKFETQLC 1220 >ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina] gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Citrus sinensis] gi|557545145|gb|ESR56123.1| hypothetical protein CICLE_v10018562mg [Citrus clementina] Length = 1198 Score = 1624 bits (4205), Expect = 0.0 Identities = 792/1171 (67%), Positives = 940/1171 (80%), Gaps = 10/1171 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 L+++ + FLK FC+KA+ +FF +YGL+SHQINS+N+F +G+Q+ FDS GE ++EPGYDP Sbjct: 39 LRDLGEEFLKTFCRKAAVSFFNEYGLVSHQINSYNEFIKNGLQKAFDSFGETIVEPGYDP 98 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SK+G+GEWR A+++FG+VTLD P+F+ G D D+ PRHA LQNMTYSSR+K Sbjct: 99 SKKGEGEWRYASMRFGQVTLDKPSFFAGN-------GGDEHDMFPRHARLQNMTYSSRMK 151 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEER 3075 V+ QVYT+ SDKFKTG + ++K +L++ T++ GR+PVMVKSDLCWM E+ Sbjct: 152 VKVQFQVYTQKRVTSDKFKTGREQYIQKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKG 211 Query: 3074 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--K 2901 DC+FD GGYF+IKGAEK F+AQEQICLKRLWV+ W++AY+ +KR R+ +++V K Sbjct: 212 DCDFDHGGYFIIKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSK 271 Query: 2900 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHD 2721 E + GEK+L+ YF EIP+W++FFALGV +D+E+V LI E+ I NIL SIHD Sbjct: 272 FEDIKGGEKVLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHD 331 Query: 2720 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 2541 AD K D FRKG NA+K++ +L++G +PP ES EE ++TYLFP L QKA FL YMVK Sbjct: 332 ADNKCDEFRKGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVK 391 Query: 2540 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 2361 CLL+AY GRRK DNRDD RNK +VHI HA +RM KA+QRDLY DR V+ Sbjct: 392 CLLQAYSGRRKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVR 451 Query: 2360 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 2181 I++YLDASI+TNGLSRAFSTGAW HPFKR ERI+G+VA+L R NPLQ + DLRRTRQQV Sbjct: 452 PIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQV 511 Query: 2180 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHES 2001 YTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNL G+VST+ILE + ++ S Sbjct: 512 QYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILE--PIFEQLFNS 569 Query: 2000 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1824 GME L DD S L GK +VF+DGDW+GVCKDS SFV++LRR+RR+ E+P Q+EIKRD+ Sbjct: 570 GMEKLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQ 629 Query: 1823 GEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWG 1647 EVRIF DAGRILRPL VV+N+ KIK L+G +++FQ+LL GI+E +G EEEEDC TAWG Sbjct: 630 SEVRIFMDAGRILRPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWG 689 Query: 1646 IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 1467 I YL + P+K++HCE D SFLLGLS GIIPFANHDHARRVLYQS KHS QAIG+ Sbjct: 690 IKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFP 749 Query: 1466 TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 1287 TTNPSIRVDT SHQL+YPQR LFRTM+SDCLGK Y +H ++PRP+ +NGQ AIVAVN Sbjct: 750 TTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGHNH--ILPRPELYNGQNAIVAVN 807 Query: 1286 VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 1107 VHLGYNQEDSLVMNRASLERGMFR+EH+RSYKAEV+N E KR +D++V+FGKIQSKI Sbjct: 808 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKIQSKI 867 Query: 1106 GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 927 GRVDSLDDDGFP+IGANLQ GDIVIGK+A +G DHSIKLKHTERGMVQKVVLS+ND+GKN Sbjct: 868 GRVDSLDDDGFPFIGANLQCGDIVIGKYADSGADHSIKLKHTERGMVQKVVLSSNDDGKN 927 Query: 926 FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 747 F+VVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF GIVPDIVINPHAFPSRQT Sbjct: 928 FSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQT 987 Query: 746 PGQ------XXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGR 585 PGQ +YATPF+TPSV+ IT QLHR G+S+WG ER+YDGR Sbjct: 988 PGQLLEAALGKGIAALGKGICSGLKRYATPFATPSVDAITEQLHRAGFSKWGTERLYDGR 1047 Query: 584 TGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD 405 TGE V SLIF+GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD Sbjct: 1048 TGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD 1107 Query: 404 CLIAHGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVED 225 CLIAHGAAANLHERLFTLSDS QMHICRKCK +ANVIQR V GGRK+RGPYCR C+S +D Sbjct: 1108 CLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYCRICDSGDD 1167 Query: 224 VVRVNVPYGAKLLCQELFSMGISLSFDTELC 132 +V+ NVPYGAKLLCQELFSMGI+L FDTE C Sbjct: 1168 IVKANVPYGAKLLCQELFSMGITLKFDTEFC 1198 >ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] Length = 1184 Score = 1618 bits (4191), Expect = 0.0 Identities = 794/1165 (68%), Positives = 941/1165 (80%), Gaps = 4/1165 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 +Q++ + FL+ FCK+A+ +FF++YGLISHQ+NS+N F +G+Q FDS GE +I GYDP Sbjct: 29 VQQLGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDP 88 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SK+G+G+WR A ++FGKVT++ PTFW A + L++LPRHA LQNMTYSSR+K Sbjct: 89 SKKGEGDWRHARVRFGKVTVERPTFW-------AVSGGNELNMLPRHARLQNMTYSSRMK 141 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEER 3075 V LQVYT +SDKFKTG + VE+ ++ + + ++ GR+PVMV+SDLCWM++ E+ Sbjct: 142 VNVDLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKA 201 Query: 3074 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--K 2901 DC+FD GGYF+IKG EK FIAQEQI +KRLW++ W+IAYR KR R+ I++V K Sbjct: 202 DCDFDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSK 261 Query: 2900 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHD 2721 VE++ GEK+LT YF EIPVW++FFALGV +D+EVV LI + + I NIL SI + Sbjct: 262 VEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRN 321 Query: 2720 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 2541 AD K F +G NAI ++ +L++ R+PP E +EE +STYLFP L S QKA FL YMVK Sbjct: 322 ADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVK 381 Query: 2540 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 2361 CLL+AY GR K DNRDD RNK +VHI HA RRM K +QRDLY DR V+ Sbjct: 382 CLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRTVR 441 Query: 2360 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 2181 I+HYLDASI+TNGLSRAFSTGAW HP+KRMERI+GVVA+L R NPLQ + DLR+TRQQV Sbjct: 442 PIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQQV 501 Query: 2180 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHES 2001 YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ G+VSTNI+E +++ K +S Sbjct: 502 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIME--SIVDKLFDS 559 Query: 2000 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1824 GME LV+DT L+GK +VFL+G+WVGVC+DS SF A++RR+RR E P+Q+EIKRD+H Sbjct: 560 GMEELVNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHK 619 Query: 1823 GEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWG 1647 GEVRIF+D GRILRPL VV NL +IK KG +++FQ+LL GI+E +G EEEEDC+TAW Sbjct: 620 GEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWS 679 Query: 1646 IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 1467 I YL T PVKY+HCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+S Sbjct: 680 IKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 739 Query: 1466 TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 1287 TTNP+IRVDT SHQLYYPQR LFRTM SDCLGK + KG++P+P+ +NGQ AIVAVN Sbjct: 740 TTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVN 799 Query: 1286 VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 1107 VHLGYNQEDSLVMNR+SLERGMFR+EHVRSYKAEV+N E KR K+++IV+FGKIQSKI Sbjct: 800 VHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKI 859 Query: 1106 GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 927 GRVDSLDDDGFPY+GANLQ GDIVIG+ A +G DHSIKLKHTERGMVQKVVLS+ND+GKN Sbjct: 860 GRVDSLDDDGFPYVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKN 919 Query: 926 FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 747 +AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF GIVPDIVINPHAFPSRQT Sbjct: 920 YAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQT 979 Query: 746 PGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVE 567 PGQ +KYATPFST SV+ IT QLHR G+SRWG ERVY+GRTGE V Sbjct: 980 PGQLLEAALGKGIACGGSMKYATPFSTISVDAITEQLHRAGFSRWGNERVYNGRTGEMVR 1039 Query: 566 SLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 387 SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKR+GGIKFGEMERDCLIAHG Sbjct: 1040 SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHG 1099 Query: 386 AAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNV 207 A+ANLHERL TLSDSSQMH+CR CK +ANVI+R V GGRKIRGPYCR C+SV+D+VRVNV Sbjct: 1100 ASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNV 1159 Query: 206 PYGAKLLCQELFSMGISLSFDTELC 132 PYGAKLLCQELFSMGI+L F+T+LC Sbjct: 1160 PYGAKLLCQELFSMGINLKFETQLC 1184 >ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 1181 Score = 1602 bits (4149), Expect = 0.0 Identities = 787/1164 (67%), Positives = 936/1164 (80%), Gaps = 4/1164 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 L E+ K L++FCKKA++ FF++YGLISHQINS+N F + G+Q++FDS GEV +EPGYD Sbjct: 36 LNELGKETLQSFCKKAASLFFDEYGLISHQINSYNAFINSGLQRVFDSFGEVAVEPGYDS 95 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SK+ DGEWRRA+++FGKVTLD P+FW G +S+D + + PRHA LQNMTYS+R+K Sbjct: 96 SKQKDGEWRRASVRFGKVTLDRPSFWGG---TSSDAEHN---MFPRHARLQNMTYSARMK 149 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEER 3075 + ++QVYT+ + RSDKFKTG+D VV+K +++ + E+ GR+PVMVKSDLCW++ E+ Sbjct: 150 IHVNVQVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKG 209 Query: 3074 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--K 2901 DC+FD GGYF+IKGAEK FIAQEQIC+KRLW++ W+++Y+ KR R+ +++V K Sbjct: 210 DCDFDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSK 269 Query: 2900 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHD 2721 +E++ +K L YF EIP+W++FFALGV +D+EV+ LI + I NI SIHD Sbjct: 270 LEYIKGEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHD 329 Query: 2720 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 2541 AD+K + FR+ A+ ++ +L++ R+PP ES+E+ IS YLFP L SR KA FL YMVK Sbjct: 330 ADEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMVK 389 Query: 2540 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 2361 CLLEAY G RK DNRD RNK +VH+ HA RRM KA+QRDLY DR+V Sbjct: 390 CLLEAYTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRDVH 449 Query: 2360 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 2181 I+HYLDASI+TNGL+RAFSTGAW HPFK MER++GVV +L R NPLQ + DLR+TRQQV Sbjct: 450 PIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQV 509 Query: 2180 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHES 2001 YTG+VGDARYPHPSHWG+VCFLSTPDGENCGLVKNLA G+VSTNI E +L+ K +S Sbjct: 510 LYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISE--SLVDKLFDS 567 Query: 2000 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1824 GME LVDDT L+GKH+VFL+G+WVGVC+DS FV +LR RR+ E+PYQ+EIKRD+ Sbjct: 568 GMEKLVDDTYTKLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQ 627 Query: 1823 GEVRIFADAGRILRPLFVVQNLKKIKDLK-GHFSFQSLLSSGIVEFIGPEEEEDCQTAWG 1647 EVRIF+DAGRILRPL VV+NL KIK K G++ F SLL GI+EFIG EEEEDC TAWG Sbjct: 628 REVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWG 687 Query: 1646 IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 1467 I +L P+KYSHCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+S Sbjct: 688 IKFLLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 747 Query: 1466 TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 1287 TTNP+IRVDT SHQL+YPQR LFRTM+SDCL ++P+P+ FNGQ AIVAVN Sbjct: 748 TTNPNIRVDTLSHQLHYPQRPLFRTMISDCL-----------VLPKPELFNGQNAIVAVN 796 Query: 1286 VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 1107 VHLGYNQEDSLVMNRASLERGMFR+EH+RSYKAEV+N E KR K+++ ++FGKIQSKI Sbjct: 797 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKI 856 Query: 1106 GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 927 GRVDSLDDDGFP+IGAN+Q+GDIVIGK A +G DHS+KLKHTERGMVQKVVLS+NDEGKN Sbjct: 857 GRVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKN 916 Query: 926 FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 747 FAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF G+VPDIVINPHAFPSRQT Sbjct: 917 FAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQT 976 Query: 746 PGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVE 567 PGQ +YATPFST SV+DI QLHR +SRWG ERVY+GRTGE V Sbjct: 977 PGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVR 1036 Query: 566 SLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 387 SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG Sbjct: 1037 SLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 1096 Query: 386 AAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNV 207 A+ANLHERLFTLSDSS+MHIC+KCK +ANVIQR V GGRKIRGPYCR CESV+D+V+V+V Sbjct: 1097 ASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDLVKVSV 1156 Query: 206 PYGAKLLCQELFSMGISLSFDTEL 135 PYGAKLLCQELFSMGISL FDT + Sbjct: 1157 PYGAKLLCQELFSMGISLKFDTRV 1180 >ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis] gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis] Length = 1203 Score = 1595 bits (4129), Expect = 0.0 Identities = 800/1216 (65%), Positives = 947/1216 (77%), Gaps = 4/1216 (0%) Frame = -1 Query: 3767 IEMDREWDFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEADCVLQEVDKGFL 3588 +E D + + G SS + +K K ST M ++ L ++ + L Sbjct: 2 VEYDDAMEQDNDIGTSSKT--EKLFKASTDMDIDFDSDSGSDCDFMDSSTSLTDIGEAKL 59 Query: 3587 KAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDPSKRGDGEWR 3408 K FC KA+T FF +YGLISHQINS+NDF ++GIQ+ FDS GE+V+EPGYDPSK+G+ EWR Sbjct: 60 KDFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYDPSKKGENEWR 119 Query: 3407 RATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQVYT 3228 A++KFGKV L+ PTFW+G AD K +LPRHA LQNMTYSS++KV ++VYT Sbjct: 120 YASVKFGKVALEKPTFWSG-----ADEHK----MLPRHARLQNMTYSSKMKVNVSVEVYT 170 Query: 3227 EGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEERDCEFDQGGY 3048 + RSDKFKTG D V+K +LN + + G LPVMVKSDLCWM E+ DC+FD GGY Sbjct: 171 RKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHGGY 230 Query: 3047 FVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMV--PKVEHLVAGEK 2874 F+IKGAEK FIAQEQICLKRLW++ W+++Y+ KR R+ +++V +E + A +K Sbjct: 231 FLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVKAEKK 290 Query: 2873 ILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDADKKFDGFR 2694 LT YF EIP+W++FFALGV +D+EV+ LIG + I NI SIHDAD+K +GFR Sbjct: 291 CLTVYFLSTEIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKTEGFR 350 Query: 2693 KGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRGR 2514 +G A++++ ++G R+PP E+ E+ YLFP L S QKA FL YMVKCLL+AY G+ Sbjct: 351 RGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQAYNGQ 409 Query: 2513 RKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDAS 2334 RK +N D RNK +VHI HA RRM KA+Q+DLY DR+V+ I+HYLDAS Sbjct: 410 RKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDAS 469 Query: 2333 IITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGDA 2154 I+TNGLSRAFSTGAW HP+KRMERI+GVVA+L R NPLQ + DLR+TR V YTG+VGDA Sbjct: 470 IVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDA 529 Query: 2153 RYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESGMELV-DDT 1977 R+PHPSHWG+VCFLSTPDGENCGLVKNLA+ G+VS NILE L+ K GME V +D+ Sbjct: 530 RFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEP--LIDKLIARGMEKVPEDS 587 Query: 1976 SCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADA 1797 L+ K +VFL+G+WVGVC+DS FVA+LRR RR+ ++P Q+EIKRD+ EVRIF+DA Sbjct: 588 HSDLDEKDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDA 647 Query: 1796 GRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAEL 1620 GRILRPL VVQNL KI+ KG + +FQSLL GI+EF+G EEEEDC TAWGI +L + Sbjct: 648 GRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVD 707 Query: 1619 ENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVD 1440 +KY+HCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+ TTNP+IRVD Sbjct: 708 GKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVD 767 Query: 1439 TNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQED 1260 T SHQLYYPQR LFRT+ SDCLGK + H G+VP+P+ +NGQ AIVAVNVHLGYNQED Sbjct: 768 TLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQED 827 Query: 1259 SLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDD 1080 SLVMNRASLERGMFR+EH+RSYKA+V+N E KR K D+ V+FGKI SKIGRVDSLDDD Sbjct: 828 SLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRVDSLDDD 887 Query: 1079 GFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQV 900 GFP+IGANLQ+GDIVIG+ A +G DHSIKLKHTERGMVQKVVLS+NDEGKNFAVVSLRQV Sbjct: 888 GFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQV 947 Query: 899 RAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXXXX 720 R+PCLGDKFSSMHGQKGVLGFLESQENFPF + GIVPDIVINPH+FPSRQTPGQ Sbjct: 948 RSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAAL 1007 Query: 719 XXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGPTF 540 +KYATPFST SVE IT QLHR G+SRWG ERVY+GRTGE V SLIFMGPTF Sbjct: 1008 GKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTF 1067 Query: 539 YQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERL 360 YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERL Sbjct: 1068 YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERL 1127 Query: 359 FTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQ 180 FTLSDSSQMHIC+KCK +ANVIQR V GGRKIRGPYCR CESV+++V+VNVPYGAKLLCQ Sbjct: 1128 FTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLLCQ 1187 Query: 179 ELFSMGISLSFDTELC 132 ELFSMGISL F+T LC Sbjct: 1188 ELFSMGISLKFETRLC 1203 >ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica] gi|462422378|gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica] Length = 1200 Score = 1591 bits (4120), Expect = 0.0 Identities = 785/1169 (67%), Positives = 931/1169 (79%), Gaps = 8/1169 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 + ++ +GFLK FCK+A+ AFF +YGLISHQINS+NDF +GIQ++FDS GE+++EPGYDP Sbjct: 43 IHDLGEGFLKFFCKEAAIAFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDP 102 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SK+G+ EWR A++KFGKVTL P+FW G +D K+Y +LPRHA LQNM+Y+S++K Sbjct: 103 SKKGESEWRYASVKFGKVTLGMPSFWGG-----SDDEKEY-KMLPRHARLQNMSYASKMK 156 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEER 3075 V ++VYT+ L SDKFKTG ++K IL+ ++ G +PVMVKSDLCWM E+ Sbjct: 157 VNITVEVYTQKLVSSDKFKTGKSQYLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKG 216 Query: 3074 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMV--PK 2901 DC+FD GGYF+IKGAEKTFIAQEQ CLKRL + ++AYR KR R+ I++V K Sbjct: 217 DCDFDHGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISK 276 Query: 2900 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHD 2721 +E++ EK+LT YF EIPVW+ FFALGV +DREV+ LI D E+ I+NIL SI D Sbjct: 277 LENIEGVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASISNILFASIRD 336 Query: 2720 ADKKFD----GFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 2553 ADK D GFR+G NA+K++ E+++ +PP ES+EE IS YLFP+L QKA FL Sbjct: 337 ADKLNDKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLG 396 Query: 2552 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 2373 YMVK LL+AY GRRK DNRDD RNK + HI HA RRM KA+QRDLY D Sbjct: 397 YMVKSLLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMAKALQRDLYGD 456 Query: 2372 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 2193 R V+ I+HYLDASI+TNG+SRAFSTGAW HPFKRMER++GVVA++ R NPLQ + D+R+T Sbjct: 457 RAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKT 516 Query: 2192 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKK 2013 RQQV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ G+VSTN+LE +L+ + Sbjct: 517 RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNVLE--SLIPQ 574 Query: 2012 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1836 GME LVDDT L GK +VFL+GDWVGVC+DS SFV +LRR RR+ ++P+Q+EIKR Sbjct: 575 LLTCGMEKLVDDTFTSLRGKDKVFLNGDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKR 634 Query: 1835 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQ 1659 D H GEVRIF+DAGRILRPL VV+NL K+K KG SFQ L +GI+E IG EEEEDC Sbjct: 635 DVHQGEVRIFSDAGRILRPLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCS 694 Query: 1658 TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 1479 TAWGI YLF + K++HCE D SFLLGLS GIIP+ANHDHARRVLYQ+ KHSQQA Sbjct: 695 TAWGIKYLFMEDKGKSATKFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQA 754 Query: 1478 IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 1299 IG+STTNP++RVDT SHQL+YPQR LF+TM SDCLGK H +VP+P+++NGQ AI Sbjct: 755 IGFSTTNPNLRVDTLSHQLHYPQRPLFQTMTSDCLGKP---GRHNRIVPKPEYYNGQNAI 811 Query: 1298 VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 1119 VAVNVHLG+NQEDS+VMNRASLERGMFR+EH+RSYKAEV+N E KR K D+ V+FGK+ Sbjct: 812 VAVNVHLGFNQEDSIVMNRASLERGMFRSEHIRSYKAEVDNKESLDKRRKPDDCVNFGKM 871 Query: 1118 QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 939 QSK GRVDSLDDDGFPY+GANLQ+GDI+IG+ + +G DHSIKLKHTERGMVQKV+LS+ND Sbjct: 872 QSKFGRVDSLDDDGFPYVGANLQSGDIIIGRCSESGADHSIKLKHTERGMVQKVLLSSND 931 Query: 938 EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 759 +GKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF G+VPDIVINPHAFP Sbjct: 932 DGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFP 991 Query: 758 SRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTG 579 SRQTPGQ +YATPFST SV+DIT QLH G+SRWG ERVY+G TG Sbjct: 992 SRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHSAGFSRWGNERVYNGATG 1051 Query: 578 EKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 399 V SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL Sbjct: 1052 AMVRSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 1111 Query: 398 IAHGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVV 219 IAHGA+ANLHERLFTLSDSSQMH+C+KCK +A VI R V GGRKIRGP+CR C+S +D+V Sbjct: 1112 IAHGASANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGRKIRGPHCRICDSADDLV 1171 Query: 218 RVNVPYGAKLLCQELFSMGISLSFDTELC 132 RVNVPYGAKLLCQELFSMGISL F+T C Sbjct: 1172 RVNVPYGAKLLCQELFSMGISLKFETRFC 1200 >ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer arietinum] Length = 1199 Score = 1578 bits (4087), Expect = 0.0 Identities = 785/1167 (67%), Positives = 926/1167 (79%), Gaps = 5/1167 (0%) Frame = -1 Query: 3617 VLQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYD 3438 +L+E+ ++ FCKKAS FF++YGLISHQINS+N FA G+Q FDS G++ + PG+D Sbjct: 43 ILKELGDDMVRYFCKKASIMFFDEYGLISHQINSYNQFATSGLQNTFDSFGDLTVTPGFD 102 Query: 3437 PSKRGDGE-WRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSR 3261 PSK+GD E +R A++KFGKVTLD P FW GE G + +LPRHA LQ MTY+S+ Sbjct: 103 PSKKGDNEHYRYASVKFGKVTLDRPMFWCGE------GNTQEMKMLPRHARLQRMTYASK 156 Query: 3260 IKVETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHE 3081 +KV +QVY RSDKFKTG + +++ I+ + + E+ GRLPVMVKSDLCWM+ E Sbjct: 157 MKVNVQVQVYIPKKVRSDKFKTGKEEYIDREIIMDENREITIGRLPVMVKSDLCWMNGVE 216 Query: 3080 ERDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPK 2901 + DCEFD GGYF+IKGAEK FIAQEQI LKRLWV P W++AY+ KR R+ +K+V Sbjct: 217 KGDCEFDHGGYFLIKGAEKIFIAQEQIFLKRLWVTNVPYWAVAYKSQMKRNRMVVKLVEN 276 Query: 2900 --VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSI 2727 VE + GEK+LT YF EIPVWL+FFALGV +D+++V LI + I NIL SI Sbjct: 277 TTVEGIKNGEKVLTVYFLSVEIPVWLLFFALGVTSDKQIVDLIDYGEGDGRIQNILFASI 336 Query: 2726 HDADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYM 2547 +AD+K + FR+G NA+ +I+E ++G ++PP ES++E ++ Y+FP++ +KA +LAYM Sbjct: 337 READEKCEQFRRGKNALLYIEERVKGVQFPPPESIDECLNMYVFPNIKGLNRKARYLAYM 396 Query: 2546 VKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDRE 2367 VK LL AY GRRK DNRDD RNK +VHI HA +RM KA+QRDLY DR+ Sbjct: 397 VKVLLLAYTGRRKTDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRD 456 Query: 2366 VQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQ 2187 V I+HYLDASIITNGL RAFSTGAW HP+KRMERI+GVVA+L RTNPLQ + +LRRTRQ Sbjct: 457 VHQIEHYLDASIITNGLQRAFSTGAWTHPYKRMERISGVVATLGRTNPLQTMAELRRTRQ 516 Query: 2186 QVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFH 2007 QV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKN+A G+VSTN+ E ++L + Sbjct: 517 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTNVTE--SILPQLF 574 Query: 2006 ESGM-ELVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDK 1830 GM ELVDDT+ +L K +VFL+GDWVGVC DS+SFVA+LR RRRK E+P+Q+EIKRD Sbjct: 575 ACGMEELVDDTTAVLGNKDKVFLNGDWVGVCSDSASFVAELRNRRRKNELPHQVEIKRDP 634 Query: 1829 HHGEVRIFADAGRILRPLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQTA 1653 EVRI +DAGRILRPL VV NL KIK K SFQSLL +G++E IGPEEEEDC+TA Sbjct: 635 SQEEVRILSDAGRILRPLLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEEEDCKTA 694 Query: 1652 WGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIG 1473 WG+ YLF E ++ VKY+HCE D SFLLGLS ++PFANHDHARRVLYQS KHS QAIG Sbjct: 695 WGVPYLFGKEGKS-SVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIG 753 Query: 1472 YSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVA 1293 +STTNP IRVD SHQL+YPQ+ LF+TM SDCLGK Y K ++P+ +F+NGQ AIVA Sbjct: 754 FSTTNPDIRVDALSHQLFYPQKPLFQTMTSDCLGKPGYLGPSK-LLPKSEFYNGQNAIVA 812 Query: 1292 VNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQS 1113 VNVHLGYNQEDSLVMNRASL+RGMFR+EH+RSYKAE EN E K+ K ++IV+FGKIQS Sbjct: 813 VNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKAENENKESTEKKRKPEDIVNFGKIQS 872 Query: 1112 KIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEG 933 KIGRVDSLDDDGFP++GANLQ GDI+IG+ A +G DHSIKLKHTERG VQKVVLS+NDEG Sbjct: 873 KIGRVDSLDDDGFPFVGANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVLSSNDEG 932 Query: 932 KNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSR 753 KNFAVVSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPF K GIVPDIVINPHAFPSR Sbjct: 933 KNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSR 992 Query: 752 QTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEK 573 QTPGQ L+ ATPFST SVE IT QLHR G+SRWG ERVY+GRTGE Sbjct: 993 QTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEM 1052 Query: 572 VESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 393 V SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA Sbjct: 1053 VRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1112 Query: 392 HGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRV 213 HGA+ANL+ERLFTLSDSSQ+HIC KCK +ANVI RPV GGRKIRGPYCRFCES +D+V Sbjct: 1113 HGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESADDIVVA 1172 Query: 212 NVPYGAKLLCQELFSMGISLSFDTELC 132 +VPYGAKLLCQELFSMGI+L F+TELC Sbjct: 1173 HVPYGAKLLCQELFSMGINLKFETELC 1199 >ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria vesca subsp. vesca] Length = 1201 Score = 1574 bits (4076), Expect = 0.0 Identities = 775/1165 (66%), Positives = 920/1165 (78%), Gaps = 4/1165 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 L ++ + FL FCK+AS +FF++YGL+SHQINS+NDF ++GIQ++FDS GE+V+EP +DP Sbjct: 46 LHDLGEVFLDEFCKEASVSFFKEYGLLSHQINSYNDFVENGIQRVFDSFGEIVVEPNFDP 105 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SK+G+ +WR A +KFGKVTL P FW G +D K+Y ++LPRHA LQNMTYS+R+ Sbjct: 106 SKKGNADWRFAAIKFGKVTLSKPCFWGG-----SDSDKEY-NMLPRHARLQNMTYSARMS 159 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEER 3075 V +QVYT+ L SDKFKTG + ++EKT L+ ++ GR+PVMVKS+LCWM E+ Sbjct: 160 VNITVQVYTQNLVESDKFKTGTEQLLEKTTLSTDSRDIIIGRIPVMVKSNLCWMKGVEKG 219 Query: 3074 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKM--VPK 2901 DCEFDQGGYF+I GAEKTFIAQEQ CLKRL + ++AYR KR R+ I++ + K Sbjct: 220 DCEFDQGGYFIINGAEKTFIAQEQSCLKRLLITNSQGLTVAYRSEVKRHRLIIRLSGISK 279 Query: 2900 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHD 2721 +E++ EK+L+ YF EIPVW+ FFALGV +D+EV+ LI E+ I+NIL SI D Sbjct: 280 LENVEGVEKVLSVYFMSTEIPVWIWFFALGVSSDKEVIDLIDYGIEDASISNILFASIRD 339 Query: 2720 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 2541 AD++ D FR+G NA+++++ ++ +PP ESVE+ IS YLFP++ QKA FL YMVK Sbjct: 340 ADERKDDFRRGNNALRYVENAIKSTTFPPGESVEDCISMYLFPNMRGLKQKARFLGYMVK 399 Query: 2540 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 2361 CLL+ G RK DNRDD RNK + H+ HA R+M KA+QRDL D V+ Sbjct: 400 CLLQTSIGLRKCDNRDDFRNKRLELAGELLERELKAHVSHARRKMAKALQRDLGGDHVVR 459 Query: 2360 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 2181 ++HYLDASI+TNG+SRAFSTGAW HPFKRMERI+GVVA++ R NPLQ + D+R+TRQQV Sbjct: 460 PVEHYLDASIVTNGVSRAFSTGAWCHPFKRMERISGVVANIGRANPLQTMIDMRKTRQQV 519 Query: 2180 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHES 2001 YTG+ GDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ +VS NI E +L K + Sbjct: 520 QYTGKAGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSINISEP--ILPKLFKC 577 Query: 2000 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1824 G+E LVDDT L GKH+VFL+GDWVG+C DS FV KLRR RR ++P+Q+EIKRD+H Sbjct: 578 GIEELVDDTYTSLAGKHKVFLNGDWVGICVDSHGFVTKLRRLRRSKKLPHQVEIKRDEHK 637 Query: 1823 GEVRIFADAGRILRPLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQTAWG 1647 GEVRIF+DAGRILRPL VVQ LKKIK KG +FQ L GI+EFIG EEEEDC+TAW Sbjct: 638 GEVRIFSDAGRILRPLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWA 697 Query: 1646 IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 1467 I YLF E + VKY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIGYS Sbjct: 698 IKYLFMEE-QGSVVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGYS 756 Query: 1466 TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 1287 TTNP++RVDT SH L+YPQR LFRTM++D LGK Y H G +P+P++FNGQ AIVAVN Sbjct: 757 TTNPNLRVDTLSHNLHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVN 816 Query: 1286 VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 1107 VHLGYNQEDS+VMNRASLERGMFR+EH+RSYKAEVEN KR K DE V+FGKIQSK Sbjct: 817 VHLGYNQEDSIVMNRASLERGMFRSEHIRSYKAEVENKLSLEKRRKPDECVNFGKIQSKF 876 Query: 1106 GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 927 GRVD+LDDDGFP +GA+LQ+GDI+IG+ + +G DHSIKLKHTERGMVQKVVLS+ND GKN Sbjct: 877 GRVDNLDDDGFPCVGASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDAGKN 936 Query: 926 FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 747 FAVVSLRQVR+P LGDKFSSMHGQKGVLGFLE QENFPF GIVPDIVINPHAFPSRQT Sbjct: 937 FAVVSLRQVRSPSLGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQT 996 Query: 746 PGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVE 567 PGQ +YATPFST SV+DIT QLHR G+SRWG ERVY+GRTGE V Sbjct: 997 PGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGEMVR 1056 Query: 566 SLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 387 LIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG Sbjct: 1057 QLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 1116 Query: 386 AAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNV 207 A+ANLHERLFTLSDSS M++C+KC+ ANVI+R + GGRKIRGPYCR C+S +D+VRVNV Sbjct: 1117 ASANLHERLFTLSDSSLMNVCQKCQNAANVIERKLTGGRKIRGPYCRVCDSADDIVRVNV 1176 Query: 206 PYGAKLLCQELFSMGISLSFDTELC 132 PYGAKLLCQELFSMGISL F+T LC Sbjct: 1177 PYGAKLLCQELFSMGISLKFETRLC 1201 >ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis sativus] Length = 1197 Score = 1568 bits (4061), Expect = 0.0 Identities = 774/1169 (66%), Positives = 919/1169 (78%), Gaps = 8/1169 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 + ++ + FLK FCKK+S AFF QYGLISHQINS+NDF +GIQ+ FD G+++++PGYDP Sbjct: 40 IHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDP 99 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SK+GDGEWR AT+KFGKVTLD P FW G A K+Y ++LPRHA LQNMTYSSR+K Sbjct: 100 SKKGDGEWRYATVKFGKVTLDKPKFWGG-----AASGKEY-NMLPRHARLQNMTYSSRMK 153 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILN--EYHTEVNFGRLPVMVKSDLCWMSKHE 3081 + L++YT+ L SDKFKTG D V+K + + +V GRLPVMV SDLCWM + Sbjct: 154 INISLEIYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQ 213 Query: 3080 ERDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP- 2904 +RDCEFD+GGYF+IKGAEK FIAQEQICL+RLW++ W++AYR KR R+ I++V Sbjct: 214 KRDCEFDRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVEN 273 Query: 2903 -KVEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSI 2727 K E L + EK+L YF E+PVW++FFALGV +D+E+V LI ++ + NIL S+ Sbjct: 274 SKSEDLKSKEKVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASV 333 Query: 2726 H--DADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 2553 D D K+ FR+G A+ + ++ +PP + +E+ ++ YLF L QK FL Sbjct: 334 REVDNDDKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGSKQKCHFLG 393 Query: 2552 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 2373 YMVKCLL+AY GRRK DNRDD RNK +VHI HA RRM KA+QRDLY D Sbjct: 394 YMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKALQRDLYGD 453 Query: 2372 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 2193 R+V I+HYLDASIITNGLSRAFSTGAW H FKRMERI+GVVA+L R NPLQ + +LRRT Sbjct: 454 RQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQTMAELRRT 513 Query: 2192 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKK 2013 RQQV+YTG+VGDARYPHPSHWG+VCFLSTPDGENCGL+KNL+ G+VS N + ++ Sbjct: 514 RQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTKK--SITPT 571 Query: 2012 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1836 GME LVD+TS GK+R+FLDG+WVGVC+DS SFV +RR+RR+ +Q+E+KR Sbjct: 572 LFRCGMENLVDNTSTSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFLHQVEVKR 631 Query: 1835 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQ 1659 D+ EVRIF+DAGRILRPL VV+NL +I KG +++FQSLL GI+E IG EEEEDC+ Sbjct: 632 DEQLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCR 691 Query: 1658 TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 1479 AW I +L E KYSHCE D SFLLGLS G++PFANHDHARR L+QS KHS QA Sbjct: 692 VAWSIKHLMEDE---GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSNQA 748 Query: 1478 IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 1299 IG+S TN + RVDT SHQL+YPQR LFRTM +DCLG Y H G++P+P+F+NGQ AI Sbjct: 749 IGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFYNGQNAI 808 Query: 1298 VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 1119 VAVNVHLGYNQEDSLVMNRASLERGMFR+EH+RSYKAEV+N E + KR K+D+ ++FGK Sbjct: 809 VAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKT 868 Query: 1118 QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 939 QSKIGRVDSLDDDGFPYIGANLQ+GDIVIG+ A +G DHSIKLKHTE+GMVQKVVLS+ND Sbjct: 869 QSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSND 928 Query: 938 EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 759 +GKN+AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF GIVPDIVINPHAFP Sbjct: 929 DGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 988 Query: 758 SRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTG 579 SRQTPGQ LKYATPFSTPSV+ IT QLHR G+SRWG ERVY+GRTG Sbjct: 989 SRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTG 1048 Query: 578 EKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 399 E + SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL Sbjct: 1049 EMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 1108 Query: 398 IAHGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVV 219 IAHGA+ANLHERLFTLSDSSQMH+C+KCK +A+VIQR V GGRK+RGPYCR CES +D+V Sbjct: 1109 IAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCESFDDIV 1168 Query: 218 RVNVPYGAKLLCQELFSMGISLSFDTELC 132 RVNVPYGAKLLCQELFSMGI+L F+T+LC Sbjct: 1169 RVNVPYGAKLLCQELFSMGINLKFETQLC 1197 >gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum] Length = 1123 Score = 1567 bits (4058), Expect = 0.0 Identities = 775/1129 (68%), Positives = 908/1129 (80%), Gaps = 15/1129 (1%) Frame = -1 Query: 3740 LEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD-----------CVLQEVDKG 3594 +EE G SS ++K S GSTRM + D +++E+ + Sbjct: 1 MEEVGCSSG--KEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGES 58 Query: 3593 FLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDPSKRGDGE 3414 FLK FCKKAST FFE+YG ISHQINS+NDF ++GIQ++FDS+GE+ +EPGYDPSKRGDG+ Sbjct: 59 FLKNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 118 Query: 3413 WRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQV 3234 W+ A++KFGKVTL+ P FW GEKFS G K+YLDLLPRHA LQNMTYS+RI VETH+QV Sbjct: 119 WKHASVKFGKVTLERPKFWAGEKFS-VGGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 177 Query: 3233 YTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEERDCEFDQG 3054 YT+ L RSDKFKTGVD V+K E +V GR+PVMV S+LCWM+ ++ DCEFD G Sbjct: 178 YTKKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHG 237 Query: 3053 GYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLVAG 2880 GYF+ KGAEKTFIAQEQ+CLKRLWV+ PTW + YRP KRKRV+IK+ K+EH+ G Sbjct: 238 GYFIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGG 297 Query: 2879 EKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDADKKFDG 2700 EK L+ Y +AE+P+W++FFALGV +DREVV LI +D E+ I NIL+ SIH+ADK + Sbjct: 298 EKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCED 356 Query: 2699 FRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYR 2520 FRKG A+ ++ L++ C++PP ESVEE I+ YLFP+L+ QKA FL YMVKCLL ++ Sbjct: 357 FRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFI 416 Query: 2519 GRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLD 2340 GRRKVDNRDD RNK R HIKHAERRMVKAMQRDLY DR+VQ I+HYLD Sbjct: 417 GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 476 Query: 2339 ASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVG 2160 ASIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ D+R++RQQV+YTG+VG Sbjct: 477 ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVG 536 Query: 2159 DARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESGME-LVD 1983 DARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+G+VST IL+ L+ GM+ LVD Sbjct: 537 DARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKLVD 594 Query: 1982 DTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFA 1803 D S L+GK +V LDG+WVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+ GEVRIF+ Sbjct: 595 DCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFS 654 Query: 1802 DAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTA 1626 D GRILRPL VV NLKKIK LKG + FQSLL +GI+E IGPEEEEDC+TAWG++Y+ A Sbjct: 655 DPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKA 714 Query: 1625 ELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIR 1446 + ENPP KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+ST NP+ R Sbjct: 715 DKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNR 774 Query: 1445 VDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQ 1266 VDTN+HQLYYPQR LFRTML+D LGK + + + KGM+PRP++FNGQCAIVAVNVHLGYNQ Sbjct: 775 VDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQ 834 Query: 1265 EDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLD 1086 EDSLVMNRASLERGMFR+EHVRSYKAEV+N E K+LK ++ V+FGK QSKIGRVDSLD Sbjct: 835 EDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLD 894 Query: 1085 DDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLR 906 DDGFP+IGANLQ+GDI+IGK + +G DHS+KLKHTERGMVQKV+LSANDEGKNFAVVSLR Sbjct: 895 DDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 954 Query: 905 QVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQXXXX 726 QVR+PCLGDKFSSMHGQKGVLGFLESQENFPF GIVPDIVINPHAFPSRQTPGQ Sbjct: 955 QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA 1014 Query: 725 XXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKVESLIFMGP 546 KYATPFST SV+ I QL G++RWG ERVY+GRTGE V SLIFMGP Sbjct: 1015 ALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGP 1074 Query: 545 TFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 399 TFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL Sbjct: 1075 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 1123 >ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Glycine max] Length = 1205 Score = 1554 bits (4023), Expect = 0.0 Identities = 767/1168 (65%), Positives = 924/1168 (79%), Gaps = 6/1168 (0%) Frame = -1 Query: 3617 VLQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYD 3438 +L+E+ + +K +CKKAS FF++YGLISHQINSFN F G+Q FDS G++V+ PG+D Sbjct: 45 ILEELGEDMVKYWCKKASMLFFDEYGLISHQINSFNHFVAIGLQNTFDSFGDLVVTPGFD 104 Query: 3437 PSKRGDGE-WRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSR 3261 PSK+G+ E +R A++KFGKV LD P FW GE G +LPRHA +Q MTY+S+ Sbjct: 105 PSKKGENEHFRYASVKFGKVKLDKPMFWGGE------GNAQEFKMLPRHARIQRMTYASK 158 Query: 3260 IKVETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHE 3081 +K++ +QVY RSDKFKTG + +++ I+ E E+ GRLPVMVKSDLCWM E Sbjct: 159 VKIQVKVQVYVPKKVRSDKFKTGKEEFLDREIMKEDEREIIIGRLPVMVKSDLCWMKDAE 218 Query: 3080 ERDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMV-- 2907 + D EFD GGYF++KGAEKTFIAQEQ+ LKRLWV P W IAY+ KR R+ IK+V Sbjct: 219 KDDDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGN 278 Query: 2906 PKVEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSI 2727 + E + G+ LT YF E+PVW++FFALGV +D+E+V LIG ++ I NIL S+ Sbjct: 279 SRSEEVENGDMCLTVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASV 338 Query: 2726 HDADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYM 2547 DAD+K FR+ NA++++++ ++ ++PP+ES++E + Y+FP ++ +KA FLAYM Sbjct: 339 RDADEKCGAFRRVRNAVQYLEKCVKSVQFPPSESMQECLEMYVFPGISGLNRKARFLAYM 398 Query: 2546 VKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDRE 2367 VK LL AY GRRK DNRDD RNK +VH+ HA +RM KA+QRDLY DR+ Sbjct: 399 VKGLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHVAHARKRMAKALQRDLYGDRD 458 Query: 2366 VQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQ 2187 V+ I+HYLDASIITNGL RAFSTGAW HP+KRMERI+GVVA++ RTNPLQ + +LRR RQ Sbjct: 459 VRPIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQ 518 Query: 2186 QVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHA-NLLKKF 2010 QV YTG+VGDARYPHPSHWGKVCFL+TPDGENCGLVKNL+ G+VST++ + ++L K Sbjct: 519 QVQYTGKVGDARYPHPSHWGKVCFLTTPDGENCGLVKNLSVTGLVSTDVTDVTESILLKL 578 Query: 2009 HESGM-ELVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRD 1833 + GM ELVDDTS L +V L+GDWVGVC DSSSFVA+LR RRR+ E+P+Q+EIKRD Sbjct: 579 VDCGMQELVDDTSTHLGSMDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRD 638 Query: 1832 KHHGEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQT 1656 + EVRI++DAGRILRPL VV NL KIK K +SFQSLL G++E IGPEEEEDC T Sbjct: 639 QSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCT 698 Query: 1655 AWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAI 1476 AWG++YLF E + VKY+HCE D SFLLGLS ++PFANHDHARRVLYQS KHS QAI Sbjct: 699 AWGVEYLFGKEGKRS-VKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAI 757 Query: 1475 GYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIV 1296 G+STTNP+IRVDT SHQL+YPQ+ LFRTM SDCLGK +S + P+ +F+NGQ AIV Sbjct: 758 GFSTTNPNIRVDTLSHQLHYPQKPLFRTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAIV 817 Query: 1295 AVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQ 1116 AVNVHLGYNQEDSLVMNRASL+RGMFR+EH+RSYK+E++N E + K+ K ++IV+F K+Q Sbjct: 818 AVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKLQ 877 Query: 1115 SKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDE 936 SKIGRVDSLDDDGFPY+GANLQ+GDI+IGK A +G D+S+KLKHTERG VQKVVLS+NDE Sbjct: 878 SKIGRVDSLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSNDE 937 Query: 935 GKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPS 756 GKNFAVVSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPF + GIVPDIVINPHAFPS Sbjct: 938 GKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPS 997 Query: 755 RQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGE 576 RQTPGQ LK ATPFSTPSV+ IT QLHR G+SRWG ERVY+GRTGE Sbjct: 998 RQTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGE 1057 Query: 575 KVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 396 V SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI Sbjct: 1058 MVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 1117 Query: 395 AHGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVR 216 AHGA+ANL+ERLFTLSDSSQ+HIC KCKK+ANVI RPV GGRKIRGPYCR CES +D+V Sbjct: 1118 AHGASANLYERLFTLSDSSQIHICSKCKKVANVILRPVSGGRKIRGPYCRHCESADDIVV 1177 Query: 215 VNVPYGAKLLCQELFSMGISLSFDTELC 132 +VPYGAKLLCQELFSMGI+L F+T+LC Sbjct: 1178 AHVPYGAKLLCQELFSMGINLKFETQLC 1205 >gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis] Length = 1196 Score = 1550 bits (4013), Expect = 0.0 Identities = 759/1166 (65%), Positives = 919/1166 (78%), Gaps = 5/1166 (0%) Frame = -1 Query: 3614 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYDP 3435 ++E+ + FL+ FCK+AST+FF +YGLISHQINS+NDF +G+Q++FDS G++++EPGYDP Sbjct: 40 IKELGEVFLQNFCKEASTSFFSEYGLISHQINSYNDFIRNGVQKVFDSFGDLIVEPGYDP 99 Query: 3434 SKRGDGEWRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 3255 SK+ EWR A ++FGKVTLD P+FW G AD K+Y +LLPRHA LQNMTYSSR+K Sbjct: 100 SKKRQNEWRYALVRFGKVTLDLPSFWGG-----ADKDKEY-NLLPRHARLQNMTYSSRMK 153 Query: 3254 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHEER 3075 V H++VYT+ L RSDKFKTG + ++K I++ +V GR+PVMVKSDLCWM E+ Sbjct: 154 VNVHIEVYTQKLVRSDKFKTGKEQFLDKEIISTEDKDVMIGRIPVMVKSDLCWMKDAEKG 213 Query: 3074 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPK-V 2898 DC FD GGYF+IKGAEKTFIAQEQIC KRLW+ ++AY+ KR R+ +++ + Sbjct: 214 DCYFDHGGYFIIKGAEKTFIAQEQICRKRLWITSHQNLTVAYQSEVKRNRLILRLAQSGL 273 Query: 2897 EHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSIHDA 2718 E + +L YF EIPVW++FFALGV +D+EVV LI ++ I NIL PSI + Sbjct: 274 EDTTVEKDVLCVYFLSTEIPVWILFFALGVSSDKEVVDLIDFPTDDASILNILFPSIQIS 333 Query: 2717 DKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKC 2538 D+ GFR+ A+ +++ ++ ++PP ES EE + +LFP+L QKA FL YMVKC Sbjct: 334 DEVCAGFRRQKKALGFVEKHIKKTQFPPRESAEECLDMFLFPNLRGMLQKARFLGYMVKC 393 Query: 2537 LLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQS 2358 LL+A+ GRRK +N+DD RNK R + HA +R KA+QRDLY D+ ++ Sbjct: 394 LLQAFTGRRKCNNKDDFRNKRLDLAGELLERELRAQVSHARKRTAKALQRDLYGDKGLRQ 453 Query: 2357 IDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVS 2178 I+ YLDASI+TNGLSRAFSTGAW HPFK+ ERI+GVVA++ RTNPLQ V D+R+TRQQV Sbjct: 454 IEFYLDASIVTNGLSRAFSTGAWCHPFKKTERISGVVANVGRTNPLQTVVDMRKTRQQVQ 513 Query: 2177 YTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHANLLKKFHESG 1998 YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ G+VS NI E +L+ +SG Sbjct: 514 YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAATGLVSINIAE--SLISTLCDSG 571 Query: 1997 ME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHG 1821 ME L +DT L+ KH+VFL+GDW+GVC DS +FV +LRR+RR+ E+P+Q+EIKRD+ HG Sbjct: 572 MENLANDTYTPLHEKHKVFLNGDWIGVCADSLAFVTELRRKRRRNELPHQVEIKRDEQHG 631 Query: 1820 EVRIFADAGRILRPLFVVQNLKKIKDLK-GHFSFQSLLSSGIVEFIGPEEEEDCQTAWGI 1644 EVRIF+D+GRILRPL VV+NL +IK K G ++F SLL GI+E IG EEEEDC+TAWGI Sbjct: 632 EVRIFSDSGRILRPLLVVENLNRIKPSKEGKYTFHSLLDKGIIELIGAEEEEDCRTAWGI 691 Query: 1643 DYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYST 1464 YLF + PV Y+HCE D SFLL +S GIIPFANHDHARRVLYQ+ KHSQQAIG+ T Sbjct: 692 KYLFMED-GGKPVNYTHCELDMSFLLSVSCGIIPFANHDHARRVLYQAQKHSQQAIGFPT 750 Query: 1463 TNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNV 1284 TNP IRVDT SHQL+YPQR LF+TM SDCLGK Y+ G +P+ + FNGQ AIVAVNV Sbjct: 751 TNPDIRVDTLSHQLHYPQRPLFQTMTSDCLGKRGYAPSQNGFIPKFECFNGQNAIVAVNV 810 Query: 1283 HLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIG 1104 HLGYNQEDS+VMNRASLERGMFR+EH+RSYKA+V+N E KR K D+ +F KI SK G Sbjct: 811 HLGYNQEDSIVMNRASLERGMFRSEHIRSYKADVDNKESTDKRRKPDDCFNFAKIPSKNG 870 Query: 1103 RVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNF 924 RVDSLDDDGFP+IGANLQ+GDIVIG+ A +G DHSIKLKHTE+GMVQKVVLS+ND+GKNF Sbjct: 871 RVDSLDDDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNF 930 Query: 923 AVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTP 744 AVVSLRQVR P LGDKFSSMHGQKGVLG+LESQENFPF GIVPDIVINPHAFPSRQTP Sbjct: 931 AVVSLRQVRQPILGDKFSSMHGQKGVLGYLESQENFPFTIQGIVPDIVINPHAFPSRQTP 990 Query: 743 GQ--XXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGRTGEKV 570 GQ L++ATPFSTPSV+ IT QLH+ G+SRWG ERVY+GRTGE V Sbjct: 991 GQLLEAALGKGIALAKGIPLRHATPFSTPSVDAITEQLHKAGFSRWGNERVYNGRTGEMV 1050 Query: 569 ESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 390 SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AH Sbjct: 1051 RSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAH 1110 Query: 389 GAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVN 210 GA+ANLHERLFTLSDSSQMHIC +C +AN+IQR + GGRK+RGPYCR C+S +D+VRVN Sbjct: 1111 GASANLHERLFTLSDSSQMHICHRCHNVANIIQRSLMGGRKVRGPYCRICKSADDIVRVN 1170 Query: 209 VPYGAKLLCQELFSMGISLSFDTELC 132 VPYGAKLLCQELF+MGI+L F+T +C Sbjct: 1171 VPYGAKLLCQELFTMGINLKFETRIC 1196 >ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Glycine max] Length = 1205 Score = 1542 bits (3992), Expect = 0.0 Identities = 765/1171 (65%), Positives = 921/1171 (78%), Gaps = 9/1171 (0%) Frame = -1 Query: 3617 VLQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFADHGIQQLFDSIGEVVIEPGYD 3438 +L+E+ + +K +CKKAS FF +YGLISHQINSFN F G+Q+ F+S G++V+ PG+D Sbjct: 42 ILEELGEDIVKYWCKKASMLFFNEYGLISHQINSFNHFIHTGLQKTFESFGDLVVTPGFD 101 Query: 3437 PSKRGDGE-WRRATLKFGKVTLDPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSR 3261 PSK+G+ E +R A++KFG V LD P FW GE G +LPRHA +Q MTY+S+ Sbjct: 102 PSKKGENEHFRYASVKFGNVKLDKPMFWGGE------GNAQEFKMLPRHARIQRMTYASK 155 Query: 3260 IKVETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPVMVKSDLCWMSKHE 3081 +K++ +QVY RSDKFKTG +++ ++ E E+ GRLPVMVKSDLCWM + E Sbjct: 156 VKIQVKVQVYVPKKVRSDKFKTGKAEFLDREVMKEDEREIIIGRLPVMVKSDLCWMKEAE 215 Query: 3080 ERDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMV-- 2907 + D EFD GGYF++KGAEKTFIAQEQ+ LKRLWV P W IAY+ KR R+ IK+V Sbjct: 216 KEDDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGN 275 Query: 2906 PKVEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILMPSI 2727 + E + G+ L YF E+PVW++FFALGV +D+E+V LIG ++ I NIL S+ Sbjct: 276 SRGEEVENGDMSLAVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASV 335 Query: 2726 HDADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYM 2547 DAD+K FR+G +A++++++ ++ ++PP+ES++E + Y+FP ++ +KA FLAYM Sbjct: 336 RDADEKCGAFRRGRHAVQYLEKCVKSVQFPPSESMQECLEMYVFPGISGLNRKARFLAYM 395 Query: 2546 VKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDRE 2367 VK LL AY GRRK DNRDD RNK +VHI HA +RM KA+QRDLY DR+ Sbjct: 396 VKGLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHIAHARKRMAKALQRDLYGDRD 455 Query: 2366 VQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQ 2187 V+ I+HYLDASIITNGL RAFSTGAW HP+KRMERI+GVVA++ RTNPLQ + +LRR RQ Sbjct: 456 VRPIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQ 515 Query: 2186 QVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHAN-LLKKF 2010 QV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA G+VST++ + +L K Sbjct: 516 QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAVTGLVSTDVSAVSEYILPKL 575 Query: 2009 HESGM-ELVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRD 1833 + GM ELVDDTS L K +V L+GDWVGVC DSSSFVA+LR RRR+ E+P+Q+EIKRD Sbjct: 576 LDCGMEELVDDTSTHLGNKDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRD 635 Query: 1832 KHHGEVRIFADAGRILRPLFVVQNLKKIKDLKGHF-SFQSLLSSGIVEFIGPEEEEDCQT 1656 + EVRI++DAGRILRPL VV NL KIK K SFQSLL G++E IGPEEEEDC T Sbjct: 636 QSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDCNSFQSLLDKGVIELIGPEEEEDCCT 695 Query: 1655 AWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAI 1476 AWG++YLF E + VKY+HCE D SFLLGLS ++PFANHDHARRVLYQS KHS QAI Sbjct: 696 AWGVEYLFGKEGKR-SVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAI 754 Query: 1475 GYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGK---SRYSDHHKGMVPRPDFFNGQC 1305 G+STTNP+IRVDT SHQL+YPQ+ LFRTM SDCLGK S + + P+ +F+NGQ Sbjct: 755 GFSTTNPNIRVDTLSHQLHYPQKPLFRTMASDCLGKPDNSLGQNKISKIPPKAEFYNGQN 814 Query: 1304 AIVAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFG 1125 AIVAVNVHLGYNQEDSLVMNRASL+RGMFR+EH+RSYK+E++N E + K+ K ++IV+F Sbjct: 815 AIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFA 874 Query: 1124 KIQSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSA 945 K+QSKIGRVDSLDDDGFPY+GANLQ+GDI+IGK A +G D+S+KLKHTERG VQKVVLS+ Sbjct: 875 KLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKGAESGADNSVKLKHTERGYVQKVVLSS 934 Query: 944 NDEGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHA 765 NDEGKNFAVVSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPF + GIVPDIVINPHA Sbjct: 935 NDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHA 994 Query: 764 FPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRLGYSRWGGERVYDGR 585 FPSRQTPGQ L+ ATPFSTPSV+ IT QLHR G+SRWG ERVY+GR Sbjct: 995 FPSRQTPGQLLEAALGKGIACGGILRQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGR 1054 Query: 584 TGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD 405 TGE V SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD Sbjct: 1055 TGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD 1114 Query: 404 CLIAHGAAANLHERLFTLSDSSQMHICRKCKKMANVIQRPVFGGRKIRGPYCRFCESVED 225 CLIAHGA+ANL+ERLFTLSDSSQ+HIC KCK +ANVI RPV GGRKIRGPYCR CES +D Sbjct: 1115 CLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRHCESADD 1174 Query: 224 VVRVNVPYGAKLLCQELFSMGISLSFDTELC 132 +V +VPYGAKLLCQELFSMGI+L F+T+LC Sbjct: 1175 IVVAHVPYGAKLLCQELFSMGINLKFETQLC 1205