BLASTX nr result

ID: Mentha28_contig00011241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00011241
         (424 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354588.1| PREDICTED: probable xyloglucan endotransgluc...    59   7e-07
ref|NP_001234470.1| xyloglucan endotransglucosylase-hydrolase XT...    55   8e-06

>ref|XP_006354588.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 30-like [Solanum tuberosum]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
 Frame = +3

Query: 3   RLAMARFRSKYIYYSYCYDTVRYXXXXXXXXXXXXMRQQFKETG----XXXXXXXXXXXX 170
           R+AM RFR+KY+YYSYCYD++RY             +Q FKETG                
Sbjct: 266 RMAMKRFRAKYMYYSYCYDSLRYSVPPPECEIDPVEQQSFKETGRLKFINKHHGHRHPKK 325

Query: 171 XXGQVMSDRNYGNQENE 221
              +V+  RNYGN++ E
Sbjct: 326 SRSEVLDARNYGNEDEE 342


>ref|NP_001234470.1| xyloglucan endotransglucosylase-hydrolase XTH5 precursor [Solanum
           lycopersicum] gi|42795460|gb|AAS46240.1| xyloglucan
           endotransglucosylase-hydrolase XTH5 [Solanum
           lycopersicum]
          Length = 337

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = +3

Query: 3   RLAMARFRSKYIYYSYCYDTVRYXXXXXXXXXXXXMRQQFKETG----XXXXXXXXXXXX 170
           R++M RFR+KY+YYSYCYD++RY             +Q FKETG                
Sbjct: 261 RMSMKRFRAKYMYYSYCYDSLRYSVPPPECEIDPVEQQHFKETGRLKFINKHHGHRHPKK 320

Query: 171 XXGQVMSDRNYGNQENE 221
              +V+  R YGN++ E
Sbjct: 321 TKSEVLDARKYGNEDEE 337


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