BLASTX nr result
ID: Mentha28_contig00011234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00011234
(328 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Ja... 48 4e-09
emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group] 43 2e-08
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group] 43 2e-08
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera] 44 3e-08
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 45 4e-08
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 42 2e-07
emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera] 42 2e-07
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 42 2e-07
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group] 45 2e-07
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 40 3e-07
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 40 3e-07
ref|XP_004515937.1| PREDICTED: uncharacterized protein LOC101500... 43 3e-07
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 42 4e-07
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 42 4e-07
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 40 6e-07
gb|AAO23078.1| polyprotein [Glycine max] 44 8e-07
gb|EMS57213.1| hypothetical protein TRIUR3_30242 [Triticum urartu] 41 8e-07
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 40 1e-06
ref|XP_006651601.1| PREDICTED: uncharacterized protein LOC102715... 40 1e-06
gb|AAT78772.1| putative polyprotein [Oryza sativa Japonica Group... 39 1e-06
>gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Japonica Group]
Length = 954
Score = 48.1 bits (113), Expect(2) = 4e-09
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -2
Query: 246 TELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRKFD 67
++LP + VVP VLD R I + K V+Q LV+W+ W + + LR +F
Sbjct: 846 SQLPRIQSTAGTSVVPSQVLDRRFIRKGSKMVEQLLVRWSVDDPHVVTWENAQELRHRFP 905
Query: 66 VTDPCGQGSENPGGIV 19
++ GQ S GG V
Sbjct: 906 DSEAWGQASTEGGGDV 921
Score = 38.1 bits (87), Expect(2) = 4e-09
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPYY*ASR 233
LKLQP Q SVV R N KLA ++YGP+ SR
Sbjct: 778 LKLQPVVQQSVVTRANRKLAFRFYGPFQVLSR 809
>emb|CAE03018.3| OSJNBa0091D06.3 [Oryza sativa Japonica Group]
Length = 753
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = -2
Query: 273 SPLSITGPTT-ELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWV 97
S + TGP +LPA VP +LD R R V Q L+QW+ + W
Sbjct: 373 SAIGFTGPVQHQLPASTAPLQ---VPLRILDRRLTKRGNSAVAQVLIQWSASVPEDATWE 429
Query: 96 DLKTLRRKFDVTDPCGQGSENPGGIV 19
DL LR +F GQ + G+V
Sbjct: 430 DLDDLRSRFPAALAWGQANSQGEGLV 455
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKLQPY Q SV +R N KLA KY+GPY
Sbjct: 315 LKLQPYVQTSVAVRANHKLAFKYFGPY 341
>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
Length = 642
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = -2
Query: 273 SPLSITGPTT-ELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWV 97
S + TGP +LPA VP +LD R R V Q L+QW+ + W
Sbjct: 485 SAIGFTGPVQHQLPASTAPLQ---VPLRILDRRLTKRGNSAVAQVLIQWSASVPEDATWE 541
Query: 96 DLKTLRRKFDVTDPCGQGSENPGGIV 19
DL LR +F GQ + G+V
Sbjct: 542 DLDDLRSRFPAALAWGQANSQGEGLV 567
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKLQPY Q SV +R N KLA KY+GPY
Sbjct: 427 LKLQPYVQTSVAVRANHKLAFKYFGPY 453
>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
Length = 1384
Score = 43.9 bits (102), Expect(2) = 3e-08
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = -2
Query: 249 TTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRKF 70
T ELP D EG + P +LD R + + + ++ LV+W D W D K LR +F
Sbjct: 1291 TVELPLTDDEGEIVLEPEGILDTRWVKKGSRIFEESLVKWKRLPLDDATWEDTKMLRDRF 1350
Score = 39.7 bits (91), Expect(2) = 3e-08
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKLQPYRQ SV + KLA+++YGPY
Sbjct: 1224 LKLQPYRQQSVFCXASQKLASRFYGPY 1250
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 45.1 bits (105), Expect(2) = 4e-08
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
+KLQPYRQ SVV+R N KL+ KY+GPY
Sbjct: 1370 VKLQPYRQQSVVMRANQKLSPKYFGPY 1396
Score = 37.7 bits (86), Expect(2) = 4e-08
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = -2
Query: 249 TTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRKF 70
T LP+V ++ F+ VP V++ + +NR GK V + LV+W+ + W L L++ F
Sbjct: 1436 TVHLPSV-MQDVFEKVPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWEFLFDLQKTF 1494
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LK+QPYRQN+ LR +LKL AK+YGP+
Sbjct: 1242 LKMQPYRQNAFGLRGSLKLRAKFYGPF 1268
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRK 73
P LP VD +G+ K P +VL R + R + V Q LV W + W D ++
Sbjct: 1308 PLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDATWEDSAFIQAT 1367
Query: 72 F 70
F
Sbjct: 1368 F 1368
>emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
Length = 1122
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKLQPYRQ SV R + KLA+++YGPY
Sbjct: 903 LKLQPYRQQSVFCRASQKLASRFYGPY 929
Score = 38.9 bits (89), Expect(2) = 2e-07
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 249 TTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRKF 70
T ELP + EG + P +LD R + + + ++ LV+W + W D K L+ +F
Sbjct: 970 TVELPLTNDEGEIVLXPEGILDTRWVKKGSRIFEESLVKWKRLPLNDATWEDTKMLQDRF 1029
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKLQPYRQN+ +R +LKL KYYGP+
Sbjct: 824 LKLQPYRQNAFGIRGSLKLRGKYYGPF 850
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRK 73
P LPAV +G K P +VL R I R+ V Q L+ W+ W D +++
Sbjct: 890 PMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKV 949
Query: 72 FDVTDP 55
F P
Sbjct: 950 FPNFQP 955
>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
Length = 394
Score = 44.7 bits (104), Expect(2) = 2e-07
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRK 73
P LP+V EG K P +VL R + R+G V Q L+ W G W D +R
Sbjct: 329 PMPNLPSVGPEGQIKTQPTAVLQRRMMPRNGVAVTQWLILWENLGPTDATWEDADVIRNM 388
Query: 72 FDVTDP 55
F +P
Sbjct: 389 FPTFNP 394
Score = 36.2 bits (82), Expect(2) = 2e-07
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
++LQPYRQ + +R +LKL +K+YGP+
Sbjct: 263 VELQPYRQTAFGIRGSLKLRSKFYGPF 289
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LK+QPYR NS+ L +LKL ++YYGP+
Sbjct: 735 LKMQPYRHNSLGLHSSLKLHSRYYGPF 761
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRK 73
P LP +D EG P +VLD R I R+ + V Q + W A W D + +
Sbjct: 801 PEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKV 860
Query: 72 FDVTDP 55
F P
Sbjct: 861 FPSFTP 866
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LK+QPYR NS+ L +LKL ++YYGP+
Sbjct: 514 LKMQPYRHNSLGLHSSLKLHSRYYGPF 540
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRK 73
P LP +D EG P +VLD R I R+ + V Q + W A W D + +
Sbjct: 580 PEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKV 639
Query: 72 FDVTDP 55
F P
Sbjct: 640 FPSFTP 645
>ref|XP_004515937.1| PREDICTED: uncharacterized protein LOC101500644 [Cicer arietinum]
Length = 204
Score = 43.1 bits (100), Expect(2) = 3e-07
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = -2
Query: 246 TELPAVDVEGHFKV-VPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRKF 70
T LP +D+ G P VL R+I + G++VQQ L+QW + A+ W D+ T++ +F
Sbjct: 109 TSLP-IDLHGQDPAYTPSQVLGRRTIQQQGEQVQQVLIQWQQKPAEEATWEDVNTIQNQF 167
Score = 37.0 bits (84), Expect(2) = 3e-07
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LK++P+RQ ++ R + KLAAKYYGPY
Sbjct: 42 LKIRPHRQVTMPTRLHPKLAAKYYGPY 68
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 41.6 bits (96), Expect(2) = 4e-07
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTE-GGADATEWVDLKTLRR 76
P + LP++ +G K P +VL R I R+G V Q L+ W G ADAT W D ++
Sbjct: 1448 PMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADAT-WEDAAVIQS 1506
Query: 75 KFDVTDP 55
+ P
Sbjct: 1507 MYPTFHP 1513
Score = 38.1 bits (87), Expect(2) = 4e-07
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
+KLQPYRQ + +R +LKL +K+YGP+
Sbjct: 1382 IKLQPYRQTAFGIRGSLKLRSKFYGPF 1408
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 41.6 bits (96), Expect(2) = 4e-07
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTE-GGADATEWVDLKTLRR 76
P + LP++ +G K P +VL R I R+G V Q L+ W G ADAT W D ++
Sbjct: 1346 PMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADAT-WEDAAVIQS 1404
Query: 75 KFDVTDP 55
+ P
Sbjct: 1405 MYPTFHP 1411
Score = 38.1 bits (87), Expect(2) = 4e-07
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
+KLQPYRQ + +R +LKL +K+YGP+
Sbjct: 1280 IKLQPYRQTAFGIRGSLKLRSKFYGPF 1306
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 40.0 bits (92), Expect(2) = 6e-07
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRK 73
P LP+V +G K P +VL R I R G V Q LV W W D ++
Sbjct: 1521 PMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSM 1580
Query: 72 FDVTDP 55
F +P
Sbjct: 1581 FPSFNP 1586
Score = 38.9 bits (89), Expect(2) = 6e-07
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKLQPYRQ + +R +LKL +K+YGP+
Sbjct: 1455 LKLQPYRQTAFGIRGSLKLRSKFYGPF 1481
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 44.3 bits (103), Expect(2) = 8e-07
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
+KLQPYRQ+S VLRKN KL+ +Y+GP+
Sbjct: 1360 VKLQPYRQHSAVLRKNQKLSMRYFGPF 1386
Score = 34.3 bits (77), Expect(2) = 8e-07
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRK 73
P LP E + P +L R I R +++Q LVQW G D W D++ ++
Sbjct: 1426 PYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKAS 1485
Query: 72 F 70
+
Sbjct: 1486 Y 1486
>gb|EMS57213.1| hypothetical protein TRIUR3_30242 [Triticum urartu]
Length = 784
Score = 41.2 bits (95), Expect(2) = 8e-07
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKLQPY Q+SVV R N KL+ KY+GPY
Sbjct: 65 LKLQPYVQSSVVRRANHKLSFKYFGPY 91
Score = 37.4 bits (85), Expect(2) = 8e-07
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -2
Query: 249 TTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRKF 70
T+++ V K VP VL R K V QGL+ W+ D W DL++ R++F
Sbjct: 109 TSKIHPVFHVSQLKKVPVQVLQSRVRQVGQKTVAQGLILWSGSSPDEATWEDLESPRQQF 168
Query: 69 DVTDPCGQG-SENPGGI 22
GQ S+ G +
Sbjct: 169 PRAAAWGQAISQRRGNV 185
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 40.4 bits (93), Expect(2) = 1e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRK 73
P + LP+V +G K P +VL R + R G V Q L+ W W D ++
Sbjct: 1410 PMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAM 1469
Query: 72 FDVTDP 55
F +P
Sbjct: 1470 FPSFNP 1475
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKL+PYRQ++ +R +LKL +K+YGP+
Sbjct: 1344 LKLKPYRQSAFGIRGSLKLRSKFYGPF 1370
>ref|XP_006651601.1| PREDICTED: uncharacterized protein LOC102715003 [Oryza brachyantha]
Length = 1415
Score = 40.4 bits (93), Expect(2) = 1e-06
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -2
Query: 252 PTTELPAVDVEGHFKVVPFSVLDYRSINRDGKEVQ-QGLVQWTEGGADATEWVDLKTLRR 76
PT LP +DV + P VLD+R ++R G Q Q L+ W+ + W D LRR
Sbjct: 1299 PTGSLPKIDVVPPY---PLRVLDFR-LSRKGNNTQTQLLIHWSNATVEDATWEDECDLRR 1354
Query: 75 KFDVTDPCGQGSENPGGIV 19
+F GQ GIV
Sbjct: 1355 RFPGALAWGQAKIQEKGIV 1373
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPYY*ASR 233
LK+QPY Q+SV N KLA KY+GP+ SR
Sbjct: 1233 LKIQPYVQSSVATGANNKLAFKYFGPFQIVSR 1264
>gb|AAT78772.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709721|gb|ABF97516.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 255
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -1
Query: 328 LKLQPYRQNSVVLRKNLKLAAKYYGPY 248
LKLQPY Q SVV R N KL+ ++YGP+
Sbjct: 105 LKLQPYVQQSVVTRANRKLSFRFYGPF 131
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -2
Query: 192 VLDYRSINRDGKEVQQGLVQWTEGGADATEWVDLKTLRRKFDVTDPCGQGSENPGGIVMN 13
VLD+R I + K V Q + W+ A W +L+ +RR+F ++ GQ S G V
Sbjct: 156 VLDHRLIRKGSKMVVQVQILWSGEEPRAITWENLQEMRRRFPTSEAWGQASSQRGENVTE 215
Query: 12 LINS 1
I++
Sbjct: 216 SIST 219