BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00011187
         (416 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlise...    92   6e-17
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...    91   2e-16
gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]    88   1e-15
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]    87   2e-15
ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    82   1e-13
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    82   1e-13
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun...    79   7e-13
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...    79   7e-13
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    78   1e-12
emb|CBI26820.3| unnamed protein product [Vitis vinifera]               78   1e-12
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...    78   1e-12
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]    78   1e-12
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...    78   1e-12
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...    78   1e-12
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]       78   1e-12
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...    78   1e-12
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    77   2e-12
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...    77   2e-12
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]       77   2e-12
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...    77   2e-12

>gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlisea aurea]
          Length = 1095

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 11/80 (13%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHCS---------RFISFPWCVYDK 153
            VRALRNE RSWF+ E +  D YA ASAWYHVTYH D+            FISFPWCV+DK
Sbjct: 1017 VRALRNEARSWFRAEDD--DAYAKASAWYHVTYHPDYWGCYNEGLRRDHFISFPWCVHDK 1074

Query: 154  LVRIKRDEVNS--LSRRFRR 207
            L++IKRD V S  L+ RFRR
Sbjct: 1075 LIKIKRDSVRSQGLASRFRR 1094


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 9/83 (10%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC---------SRFISFPWCVYDK 153
            VR+LRNE RSWFKK +E  D YA ASAWY+VTYH D+            ++SFPWCVYDK
Sbjct: 1023 VRSLRNEARSWFKKGTEADDVYAKASAWYYVTYHPDYFGCYNEGMKRDHYLSFPWCVYDK 1082

Query: 154  LVRIKRDEVNSLSRRFRRVTNLR 222
            LV+IK+D     SRR  ++ +LR
Sbjct: 1083 LVKIKKDN----SRRASQMASLR 1101


>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 10/68 (14%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC----------SRFISFPWCVYD 150
            V++LRNE RSWFKK S++ +PYAMASAWYHVTYH D            + +ISFPWCVYD
Sbjct: 963  VKSLRNEARSWFKKGSKSGNPYAMASAWYHVTYHHDFWGHYNKDMKKRNHYISFPWCVYD 1022

Query: 151  KLVRIKRD 174
            KLV+IK +
Sbjct: 1023 KLVQIKNE 1030


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/67 (64%), Positives = 47/67 (70%), Gaps = 10/67 (14%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYH----------VDHCSRFISFPWCVYD 150
            VRALRNE RSWFKK SE+ D YAMASAWYHVTY           +     +ISFPWCVYD
Sbjct: 1020 VRALRNEARSWFKKGSESGDAYAMASAWYHVTYDSSFWGCYNVGMKRRGHYISFPWCVYD 1079

Query: 151  KLVRIKR 171
            KLV+IKR
Sbjct: 1080 KLVQIKR 1086


>ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 292

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 18/87 (20%)
 Frame = +1

Query: 1   VRALRNEVRSWFKKESETQ---DPYAMASAWYHVTYHVDHCS---------RFISFPWCV 144
           VRALR E R+WFK++S +    D YA ASAWYHVTYH D+            F+SFPWCV
Sbjct: 201 VRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCV 260

Query: 145 YDKLVRIKRDEVN------SLSRRFRR 207
           YD+LV IK+D+ +      +L ++FR+
Sbjct: 261 YDRLVEIKKDKTSIGNAFPALEQQFRQ 287


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 18/87 (20%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQ---DPYAMASAWYHVTYHVDHCS---------RFISFPWCV 144
            VRALR E R+WFK++S +    D YA ASAWYHVTYH D+            F+SFPWCV
Sbjct: 1041 VRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCV 1100

Query: 145  YDKLVRIKRDEVN------SLSRRFRR 207
            YD+LV IK+D+ +      +L ++FR+
Sbjct: 1101 YDRLVEIKKDKTSIGNAFPALEQQFRQ 1127


>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
           gi|462422197|gb|EMJ26460.1| hypothetical protein
           PRUPE_ppa001524mg [Prunus persica]
          Length = 808

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 22/95 (23%)
 Frame = +1

Query: 1   VRALRNEVRSWFKK-----ESETQDPYAMASAWYHVTYHVDHCS---------RFISFPW 138
           VR+LR E R+WF +     +S   D YA ASAWYHVTYH  +            FISFPW
Sbjct: 713 VRSLRKEARTWFNEKATGLDSGADDVYAKASAWYHVTYHPKYFGCYNEGLNRDHFISFPW 772

Query: 139 CVYDKLVRIKRDE--------VNSLSRRFRRVTNL 219
           CVYDKLV IK+++        ++SL RRFR   +L
Sbjct: 773 CVYDKLVHIKKEKASVRRARNLSSLERRFRNDLHL 807


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC---------SRFISFPWCVYDK 153
            VRALR E R+WFK+ ++  D    ASAWYHVTYH  +          + FISFPWCVYD+
Sbjct: 1024 VRALRKEARAWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRAHFISFPWCVYDQ 1083

Query: 154  LVRIKRDEVNSLSRRFRRVTNL 219
            L++IK+D+      R R V NL
Sbjct: 1084 LIQIKKDKA-----RNRPVLNL 1100


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 9/83 (10%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC---------SRFISFPWCVYDK 153
            VRALR E R+WFK+ ++  D    ASAWYHVTYH  +            FISFPWCVYD+
Sbjct: 1025 VRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQ 1084

Query: 154  LVRIKRDEVNSLSRRFRRVTNLR 222
            L++IK+++  +L+R    +++LR
Sbjct: 1085 LIQIKKEK--ALNRPVLNLSSLR 1105


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
 Frame = +1

Query: 1    VRALRNEVRSWFKK-----ESETQDPYAMASAWYHVTYHVDHC---------SRFISFPW 138
            V++LR E R+WF K     +SE  D YA ASAWYHVTYH D+            F+SFPW
Sbjct: 825  VKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPW 884

Query: 139  CVYDKLVRIKRDEVNSLS 192
            CVYDKL+  KR +++  S
Sbjct: 885  CVYDKLIHTKRKKMSGRS 902


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
 Frame = +1

Query: 1    VRALRNEVRSWFKK-----ESETQDPYAMASAWYHVTYHVDHC---------SRFISFPW 138
            V++LR E R+WF K     +SE  D YA ASAWYHVTYH D+            F+SFPW
Sbjct: 1027 VKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPW 1086

Query: 139  CVYDKLVRIKRDEVNSLS 192
            CVYDKL+  KR +++  S
Sbjct: 1087 CVYDKLIHTKRKKMSGRS 1104


>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
          Length = 654

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
 Frame = +1

Query: 1   VRALRNEVRSWFKK-----ESETQDPYAMASAWYHVTYHVDHC---------SRFISFPW 138
           V++LR E R+WF K     +SE  D YA ASAWYHVTYH D+            F+SFPW
Sbjct: 560 VKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPW 619

Query: 139 CVYDKLVRIKRDEVNSLS 192
           CVYDKL+  KR +++  S
Sbjct: 620 CVYDKLIHTKRKKMSGRS 637


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 9/83 (10%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC---------SRFISFPWCVYDK 153
            VRALR E R+WFK+ ++  D    ASAWYHVTYH  +            FISFPWCVYD+
Sbjct: 1049 VRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQ 1108

Query: 154  LVRIKRDEVNSLSRRFRRVTNLR 222
            L++IK+++  +L+R    +++LR
Sbjct: 1109 LIQIKKEK--ALNRPVLNLSSLR 1129


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 9/83 (10%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC---------SRFISFPWCVYDK 153
            VRALR E R+WFK+ ++  D    ASAWYHVTYH  +            FISFPWCVYD+
Sbjct: 1090 VRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQ 1149

Query: 154  LVRIKRDEVNSLSRRFRRVTNLR 222
            L++IK+++  +L+R    +++LR
Sbjct: 1150 LIQIKKEK--ALNRPVLNLSSLR 1170


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 22/95 (23%)
 Frame = +1

Query: 1    VRALRNEVRSWFKK-----ESETQDPYAMASAWYHVTYHVDHCSR---------FISFPW 138
            VR+LR E RSWF +     + E  D YA ASAWY+VTYH  +  +         F+SFPW
Sbjct: 1015 VRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPW 1074

Query: 139  CVYDKLVRIKRD--------EVNSLSRRFRRVTNL 219
            CVYDKL++IK++        +++SL  RF+R  +L
Sbjct: 1075 CVYDKLIQIKKEKAAVREALDLSSLEHRFQRGLHL 1109


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 9/66 (13%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC---------SRFISFPWCVYDK 153
            VR+LR E R+WFKK S+  D  A ASAWYHVTYH  +            FISFPWCVYD+
Sbjct: 954  VRSLRKEARTWFKKRSDIDDMLAKASAWYHVTYHHTYWGLYNEGLRRDHFISFPWCVYDQ 1013

Query: 154  LVRIKR 171
            L++IK+
Sbjct: 1014 LIQIKK 1019


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC---------SRFISFPWCVYDK 153
            VRALR E R+WFK+ ++  D    ASAWYHVTYH  +            FISFPWCVYD+
Sbjct: 1025 VRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQ 1084

Query: 154  LVRIKRDEVNSLSRRFRRVTNL 219
            L++IK+++      R R V NL
Sbjct: 1085 LIQIKKEKA-----RNRPVLNL 1101


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 14/87 (16%)
 Frame = +1

Query: 1    VRALRNEVRSWFKK-----ESETQDPYAMASAWYHVTYHVDHC---------SRFISFPW 138
            VR+LR E RSWF +     +SE  D YA ASAWYHVTYH  +          + F+SFPW
Sbjct: 1015 VRSLRKEARSWFNEKGNGLDSEADDLYAKASAWYHVTYHPSYWGLYNEGMNRNHFLSFPW 1074

Query: 139  CVYDKLVRIKRDEVNSLSRRFRRVTNL 219
            CVYDKL+ IK+      SRR  R+++L
Sbjct: 1075 CVYDKLILIKK---KVTSRRNSRLSSL 1098


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 22/91 (24%)
 Frame = +1

Query: 1    VRALRNEVRSWFKK-----ESETQDPYAMASAWYHVTYHVDHCSR---------FISFPW 138
            VR+LR E RSWF +     + E  D YA ASAWY+VTYH  +  +         F+SFPW
Sbjct: 1015 VRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHHSYWGQYNEGMNRDHFLSFPW 1074

Query: 139  CVYDKLVRIKRD--------EVNSLSRRFRR 207
            CVYDKL++IK++        +++SL  RF+R
Sbjct: 1075 CVYDKLIQIKKEKAALREALDLSSLEHRFQR 1105


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
 Frame = +1

Query: 1    VRALRNEVRSWFKKESETQDPYAMASAWYHVTYHVDHC---------SRFISFPWCVYDK 153
            VRALR E R+WFK+ ++  D    ASAWYHVTYH  +            FISFPWCVYD+
Sbjct: 1025 VRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQ 1084

Query: 154  LVRIKRDEVNSLSRRFRRVTNL 219
            L++IK+++      R R V NL
Sbjct: 1085 LIQIKKEKA-----RNRPVLNL 1101