BLASTX nr result

ID: Mentha28_contig00006224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00006224
         (394 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus...    72   8e-11
ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    68   1e-09
ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    68   1e-09
ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    65   1e-08
dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]                64   2e-08
ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    62   8e-08

>gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus guttatus]
          Length = 383

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 45/86 (52%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
 Frame = +3

Query: 3   SSRKGYRNGG---EEGSSR---AGRFYRRLELPGRGANSDRWVFFTRGLSFRSPRVVAXX 164
           SSR+GYR GG   +EGSS     GR Y R++    GA SDRW FFTR LS +SP+VVA  
Sbjct: 288 SSRRGYRTGGGGYDEGSSSRPAGGRSYWRID---GGAKSDRWAFFTRALSMKSPKVVAEG 344

Query: 165 XXXXXXXXXXXXXPVKMPSFKCLEPK 242
                         VKMPSFKCLEPK
Sbjct: 345 GDGGSTTPV-----VKMPSFKCLEPK 365


>ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 433

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
 Frame = +3

Query: 3   SSRKGYRNGGEEGSSRAGRFYRRLELPGRGANSDRWV------FFTRGLSFRSPRVVAXX 164
           SSRKGYR G  +GS+R  R  +R+E       SDRW+      FF+RG S +SPRV A  
Sbjct: 334 SSRKGYRTGTGDGSNRGSRSNKRMEWSEPEPKSDRWIFTMAPPFFSRGSSMKSPRVGA-- 391

Query: 165 XXXXXXXXXXXXXPVKMPSFKCLEPKTDGGDENRPFSGQSPV 290
                         VK+PSFKCLEPK D        S + PV
Sbjct: 392 EAGEGSTSGSLRTAVKLPSFKCLEPKGDEASLMSTDSARPPV 433


>ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 432

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
 Frame = +3

Query: 3   SSRKGYRNGGEEGSSRAGRFYRRLELPGRGANSDRWV------FFTRGLSFRSPRVVAXX 164
           SSRKGYR G  +GS+R  R  +R+E       SDRW+      FF+RG S +SPRV A  
Sbjct: 333 SSRKGYRTGTGDGSNRGSRSNKRMEWSEPEPKSDRWIFTMTPPFFSRGSSMKSPRVGA-- 390

Query: 165 XXXXXXXXXXXXXPVKMPSFKCLEPKTDGGDENRPFSGQSPV 290
                         VK+PSFKCLEPK D        S + PV
Sbjct: 391 EAGEGSTSGSMRTAVKLPSFKCLEPKGDEASLMSTDSARPPV 432


>ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 398

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
 Frame = +3

Query: 3   SSRKGYRNGGEEGSSRAGRFYRRLELPGRGANSDRWV------FFTRGLSFRSPRVVAXX 164
           S+ +GYR G  EGS+R  R ++R++     A SDRW       FFTRG S +SP+V A  
Sbjct: 298 STTRGYRAGPGEGSNRGTRSFKRIDRFDPEAKSDRWFLKIAPPFFTRGSSMKSPKVRA-D 356

Query: 165 XXXXXXXXXXXXXPVKMPSFKCLEPKTDGGDENRPFSGQSPV 290
                         VKMPSFKCLEPK D        S +SPV
Sbjct: 357 NEEASTSRSNVKVAVKMPSFKCLEPKGDEPGLLANDSARSPV 398


>dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]
          Length = 154

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
 Frame = +3

Query: 3   SSRKGYRNGGEEGSSRAGRFYRRLELPGRGANSDRWV------FFTRGLSFRSPRVVAXX 164
           S+ +GYR G  EGS+R  R ++R++     A SDRW       FFTRG S +SP++ A  
Sbjct: 54  STTRGYRAGPGEGSNRGTRSFKRIDRFDPEAKSDRWFLKIAPPFFTRGSSMKSPKLRA-D 112

Query: 165 XXXXXXXXXXXXXPVKMPSFKCLEPKTDGGDENRPFSGQSPV 290
                         VKMPSFKCLEPK D        S +SPV
Sbjct: 113 NEEASTSRSNVKVAVKMPSFKCLEPKGDEPGLLANDSARSPV 154


>ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 398

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
 Frame = +3

Query: 3   SSRKGYRNGGEEGSSRAGRFYRRLELPGRGANSDRWV------FFTRGLSFRSPRVVAXX 164
           S+ +GYR G  EGS+R  R ++R++       SDRW       FFTRG S +SP+V A  
Sbjct: 298 STTRGYRAGPGEGSNRGARSFKRIDRFDPETKSDRWFLKIAPPFFTRGSSMKSPKVRA-D 356

Query: 165 XXXXXXXXXXXXXPVKMPSFKCLEPKTDGGDENRPFSGQSPV 290
                         VK+PSF+CLEPK D        S +SPV
Sbjct: 357 NEEASTSRSNMKVAVKLPSFQCLEPKGDEPGLMANDSARSPV 398


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