BLASTX nr result

ID: Mentha28_contig00003950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00003950
         (413 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU43698.1| hypothetical protein MIMGU_mgv1a000899mg [Mimulus...    80   2e-13
ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein lig...    59   7e-07
ref|XP_004233209.1| PREDICTED: putative E3 ubiquitin-protein lig...    57   3e-06

>gb|EYU43698.1| hypothetical protein MIMGU_mgv1a000899mg [Mimulus guttatus]
          Length = 947

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/57 (71%), Positives = 44/57 (77%)
 Frame = +1

Query: 142 MASLHKLLSQDGFHPENSPKPTKKVKFRDRKNQQDSITLPIYICHDRRSFDSSKPRP 312
           MASLHKLLSQ+GF    S KP KKVKF+D  N   SITLPIYICHDRRSFDSS  +P
Sbjct: 1   MASLHKLLSQEGFERRISRKPNKKVKFKDDSN---SITLPIYICHDRRSFDSSSSKP 54


>ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus] gi|449527759|ref|XP_004170877.1| PREDICTED:
           putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus]
          Length = 863

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = +1

Query: 142 MASLHKLLSQDGFHPENSPKPTK--KVKFRDRKNQQDSITLPIYICHDRRSFDSSKPR 309
           MASL +LL+++GF   N P   K  + K R R    DS+TLPIYICHD+++ DSSK +
Sbjct: 1   MASLQELLTREGFEGSNYPSTRKLSRPKGRSRTAPDDSVTLPIYICHDKKTIDSSKKK 58


>ref|XP_004233209.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
           lycopersicum]
          Length = 1002

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
 Frame = +1

Query: 142 MASLHKLLSQDGFHPENSPKPTKKVKFRDRKNQQDSITLPIYICHDRRS----FDSSKPR 309
           MASL +LL+ +GF  E + K  +KVKF+DR++  ++I LPIYICHDRRS    F  +K R
Sbjct: 1   MASLQELLADEGF--EKTKKTHRKVKFKDREDS-NNIALPIYICHDRRSSSLDFSKTKSR 57

Query: 310 PP 315
            P
Sbjct: 58  RP 59


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