BLASTX nr result
ID: Mentha28_contig00003909
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00003909
(317 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu... 145 6e-33
gb|EYU34946.1| hypothetical protein MIMGU_mgv1a015848mg [Mimulus... 144 2e-32
gb|EYU34945.1| hypothetical protein MIMGU_mgv1a015848mg [Mimulus... 144 2e-32
ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Popu... 141 8e-32
gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti... 141 8e-32
ref|XP_002322450.1| DNA-directed RNA polymerase II family protei... 141 1e-31
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I... 140 1e-31
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ... 140 2e-31
gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subun... 139 3e-31
ref|XP_007142704.1| hypothetical protein PHAVU_007G009900g [Phas... 139 4e-31
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin... 139 5e-31
ref|XP_006341053.1| PREDICTED: DNA-directed RNA polymerases II a... 138 9e-31
ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, I... 138 9e-31
ref|XP_004246445.1| PREDICTED: DNA-directed RNA polymerases I, I... 138 9e-31
ref|XP_007143369.1| hypothetical protein PHAVU_007G066800g [Phas... 137 1e-30
ref|XP_006395370.1| hypothetical protein EUTSA_v10005087mg [Eutr... 137 2e-30
ref|XP_006281281.1| hypothetical protein CARUB_v10027329mg [Caps... 137 2e-30
ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases I, I... 136 3e-30
ref|NP_001059582.1| Os07g0463100 [Oryza sativa Japonica Group] g... 136 3e-30
ref|XP_007204747.1| hypothetical protein PRUPE_ppa013037mg [Prun... 136 3e-30
>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
polymerase subunit rpb6, putative [Ricinus communis]
Length = 124
Score = 145 bits (366), Expect = 6e-33
Identities = 74/88 (84%), Positives = 75/88 (85%)
Frame = +1
Query: 52 NNNXXXXXXXXXXXXKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 231
NNN K+EQEA ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG
Sbjct: 14 NNNEDVPGDPIETEDKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 73
Query: 232 ETDPLEIAMKELRERKIPFTIRRYLPDG 315
ETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 74 ETDPLEIAMKELRERKIPFTIRRYLPDG 101
>gb|EYU34946.1| hypothetical protein MIMGU_mgv1a015848mg [Mimulus guttatus]
Length = 127
Score = 144 bits (362), Expect = 2e-32
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
KQEQE VERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 32 KQEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 91
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 92 KIPFTIRRYLPDG 104
>gb|EYU34945.1| hypothetical protein MIMGU_mgv1a015848mg [Mimulus guttatus]
Length = 143
Score = 144 bits (362), Expect = 2e-32
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
KQEQE VERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 48 KQEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 107
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 108 KIPFTIRRYLPDG 120
>ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Populus trichocarpa]
gi|550327061|gb|EEE96460.2| hypothetical protein
POPTR_0012s13610g [Populus trichocarpa]
Length = 183
Score = 141 bits (356), Expect = 8e-32
Identities = 72/88 (81%), Positives = 75/88 (85%)
Frame = +1
Query: 52 NNNXXXXXXXXXXXXKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 231
+NN K+EQE VERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEG
Sbjct: 73 DNNEDDKGEPIETEDKEEQEPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEG 132
Query: 232 ETDPLEIAMKELRERKIPFTIRRYLPDG 315
ETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 133 ETDPLEIAMKELRERKIPFTIRRYLPDG 160
>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
polymerase IIb [Nicotiana tabacum]
Length = 143
Score = 141 bits (356), Expect = 8e-32
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K EQE VERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 48 KTEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 107
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 108 KIPFTIRRYLPDG 120
>ref|XP_002322450.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
gi|222869446|gb|EEF06577.1| DNA-directed RNA polymerase
II family protein [Populus trichocarpa]
Length = 143
Score = 141 bits (355), Expect = 1e-31
Identities = 72/88 (81%), Positives = 74/88 (84%)
Frame = +1
Query: 52 NNNXXXXXXXXXXXXKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 231
NNN K+EQ VERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEG
Sbjct: 33 NNNEDDTGEPIETEDKEEQAPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEG 92
Query: 232 ETDPLEIAMKELRERKIPFTIRRYLPDG 315
ETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 93 ETDPLEIAMKELRERKIPFTIRRYLPDG 120
>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2 isoform 1 [Vitis vinifera]
gi|297741100|emb|CBI31831.3| unnamed protein product
[Vitis vinifera]
Length = 142
Score = 140 bits (354), Expect = 1e-31
Identities = 72/88 (81%), Positives = 73/88 (82%)
Frame = +1
Query: 52 NNNXXXXXXXXXXXXKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 231
NNN K+ E VERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG
Sbjct: 32 NNNNEDVPDALEEQEKEVHETVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 91
Query: 232 ETDPLEIAMKELRERKIPFTIRRYLPDG 315
ETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 92 ETDPLEIAMKELRERKIPFTIRRYLPDG 119
>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Glycine max]
Length = 142
Score = 140 bits (353), Expect = 2e-31
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K+E++ VERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 47 KEEEQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 106
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 107 KIPFTIRRYLPDG 119
>gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Morus
notabilis]
Length = 143
Score = 139 bits (351), Expect = 3e-31
Identities = 71/88 (80%), Positives = 73/88 (82%)
Frame = +1
Query: 52 NNNXXXXXXXXXXXXKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 231
NNN K ++E VE PRKTSKYMTKYERARILGTRALQISMNAPVMVELEG
Sbjct: 33 NNNDDTGGEPIEAEDKADEEPVEHPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 92
Query: 232 ETDPLEIAMKELRERKIPFTIRRYLPDG 315
ETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 93 ETDPLEIAMKELRERKIPFTIRRYLPDG 120
>ref|XP_007142704.1| hypothetical protein PHAVU_007G009900g [Phaseolus vulgaris]
gi|593593443|ref|XP_007142705.1| hypothetical protein
PHAVU_007G009900g [Phaseolus vulgaris]
gi|561015894|gb|ESW14698.1| hypothetical protein
PHAVU_007G009900g [Phaseolus vulgaris]
gi|561015895|gb|ESW14699.1| hypothetical protein
PHAVU_007G009900g [Phaseolus vulgaris]
Length = 141
Score = 139 bits (350), Expect = 4e-31
Identities = 68/73 (93%), Positives = 72/73 (98%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K+E++ VERPRKTSKYMTKYERARILGTRA+QISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 47 KEEEQPVERPRKTSKYMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRER 106
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 107 KIPFTIRRYLPDG 119
>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
gi|255626491|gb|ACU13590.1| unknown [Glycine max]
Length = 142
Score = 139 bits (349), Expect = 5e-31
Identities = 68/73 (93%), Positives = 72/73 (98%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K+E++ V+RPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 47 KEEEQPVKRPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 106
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 107 KIPFTIRRYLPDG 119
>ref|XP_006341053.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
[Solanum tuberosum]
Length = 144
Score = 138 bits (347), Expect = 9e-31
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +1
Query: 100 QEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK 279
++QE VERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK
Sbjct: 50 EQQEPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK 109
Query: 280 IPFTIRRYLPDG 315
IPFTIRRYLPDG
Sbjct: 110 IPFTIRRYLPDG 121
>ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Fragaria vesca subsp. vesca]
Length = 142
Score = 138 bits (347), Expect = 9e-31
Identities = 70/88 (79%), Positives = 74/88 (84%)
Frame = +1
Query: 52 NNNXXXXXXXXXXXXKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 231
+NN K+EQ VERPRKTSK+MTKYERARILGTRA+QISMNAPVMVELEG
Sbjct: 32 DNNDDMAGDAIETDDKEEQAPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEG 91
Query: 232 ETDPLEIAMKELRERKIPFTIRRYLPDG 315
ETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 92 ETDPLEIAMKELRERKIPFTIRRYLPDG 119
>ref|XP_004246445.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Solanum lycopersicum]
Length = 144
Score = 138 bits (347), Expect = 9e-31
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +1
Query: 100 QEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK 279
++QE VERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK
Sbjct: 50 EQQEPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK 109
Query: 280 IPFTIRRYLPDG 315
IPFTIRRYLPDG
Sbjct: 110 IPFTIRRYLPDG 121
>ref|XP_007143369.1| hypothetical protein PHAVU_007G066800g [Phaseolus vulgaris]
gi|561016559|gb|ESW15363.1| hypothetical protein
PHAVU_007G066800g [Phaseolus vulgaris]
Length = 142
Score = 137 bits (346), Expect = 1e-30
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K+E++ ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 47 KEEEQQGERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 106
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 107 KIPFTIRRYLPDG 119
>ref|XP_006395370.1| hypothetical protein EUTSA_v10005087mg [Eutrema salsugineum]
gi|557092009|gb|ESQ32656.1| hypothetical protein
EUTSA_v10005087mg [Eutrema salsugineum]
Length = 144
Score = 137 bits (345), Expect = 2e-30
Identities = 68/73 (93%), Positives = 72/73 (98%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K EQEAV+RPR+TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+R
Sbjct: 49 KIEQEAVQRPRETSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQR 108
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 109 KIPFTIRRYLPDG 121
>ref|XP_006281281.1| hypothetical protein CARUB_v10027329mg [Capsella rubella]
gi|482549985|gb|EOA14179.1| hypothetical protein
CARUB_v10027329mg [Capsella rubella]
Length = 144
Score = 137 bits (344), Expect = 2e-30
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K E EAV+RPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+R
Sbjct: 49 KVETEAVQRPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQR 108
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 109 KIPFTIRRYLPDG 121
>ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Cicer arietinum]
Length = 145
Score = 136 bits (343), Expect = 3e-30
Identities = 67/73 (91%), Positives = 71/73 (97%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K++++ ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 50 KEDEQPGERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 109
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 110 KIPFTIRRYLPDG 122
>ref|NP_001059582.1| Os07g0463100 [Oryza sativa Japonica Group]
gi|22093730|dbj|BAC07023.1| putative DNA-directed RNA
polymerase Iia [Oryza sativa Japonica Group]
gi|113611118|dbj|BAF21496.1| Os07g0463100 [Oryza sativa
Japonica Group] gi|125558240|gb|EAZ03776.1| hypothetical
protein OsI_25904 [Oryza sativa Indica Group]
gi|215768441|dbj|BAH00670.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 142
Score = 136 bits (342), Expect = 3e-30
Identities = 70/88 (79%), Positives = 71/88 (80%)
Frame = +1
Query: 52 NNNXXXXXXXXXXXXKQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 231
NNN +EQE RPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG
Sbjct: 32 NNNEDAVDDVVGAEDDKEQEKTARPRKTSKYMTKYERARILGTRALQISMNAPVMVELEG 91
Query: 232 ETDPLEIAMKELRERKIPFTIRRYLPDG 315
ETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 92 ETDPLEIAMKELRARKIPFTIRRYLPDG 119
>ref|XP_007204747.1| hypothetical protein PRUPE_ppa013037mg [Prunus persica]
gi|462400278|gb|EMJ05946.1| hypothetical protein
PRUPE_ppa013037mg [Prunus persica]
Length = 143
Score = 136 bits (342), Expect = 3e-30
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = +1
Query: 97 KQEQEAVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 276
K+EQ VE PRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER
Sbjct: 48 KEEQAQVEGPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 107
Query: 277 KIPFTIRRYLPDG 315
KIPFTIRRYLPDG
Sbjct: 108 KIPFTIRRYLPDG 120