BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00003820
         (759 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus...   300   5e-79
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   274   3e-71
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   273   4e-71
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   273   4e-71
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-...   268   1e-69
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   259   7e-67
gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlise...   258   1e-66
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...   255   1e-65
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   250   3e-64
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps...   249   1e-63
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp....   249   1e-63
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...   248   2e-63
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr...   246   5e-63
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...   246   5e-63
emb|CAD20832.1| sigma factor [Spinacia oleracea]                      245   1e-62
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...   244   2e-62
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha...   244   2e-62
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   244   2e-62
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi...   243   4e-62
emb|CAB83107.1| sigma factor 3 [Sinapis alba]                         241   3e-61

>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus guttatus]
          Length = 478

 Score =  300 bits (767), Expect = 5e-79
 Identities = 145/183 (79%), Positives = 166/183 (90%)
 Frame = -2

Query: 551 NKKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNY 372
           NK+ K ARNEA+MSSGVK VAELEK+R +LE++ G++ SLS+WAEAAG++KKELQ+ L+Y
Sbjct: 176 NKRQKTARNEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHY 235

Query: 371 GWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYV 192
           GWHCRDELL ST SLVLFIARNY GLGVAFEDLIQAG +GVLQGAERFDQ+RGYKFSTYV
Sbjct: 236 GWHCRDELLRSTHSLVLFIARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYV 295

Query: 191 QYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSV 12
           QYW+RKSMSTLVA+H+RG+RIP TLSK +NQVHKARKAL  SNG YPDD EIAKFTGLSV
Sbjct: 296 QYWIRKSMSTLVAKHARGVRIPCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSV 355

Query: 11  AKI 3
           AK+
Sbjct: 356 AKV 358


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           tuberosum]
          Length = 555

 Score =  274 bits (700), Expect = 3e-71
 Identities = 143/262 (54%), Positives = 183/262 (69%), Gaps = 12/262 (4%)
 Frame = -2

Query: 752 RLSSAPTENVDEPRLNDLVENQVGKVVIXXXXXXXXXXXXXXXXXXXSD---------TL 600
           ++   P E + E   +DLV N + KVV+                   +D          +
Sbjct: 176 KVLDVPRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNI 235

Query: 599 QEDXXXXXXXXXXXXR---NKKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLS 429
           QED            +   NK+ K+A+NEAEMS GVK+VA+LE++R  LE++ G + + S
Sbjct: 236 QEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFS 295

Query: 428 SWAEAAGVEKKELQRRLNYGWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGV 249
           SWAEAAG+E+KELQ+RL++GW+CRDELL STRSLVL++ARNY GLGVAFEDLIQAG +GV
Sbjct: 296 SWAEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGV 355

Query: 248 LQGAERFDQTRGYKFSTYVQYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRR 69
           LQGA RFD TRGYKFSTYVQYW+RKS+S LVA+H+RG+RIP T+ K +NQ+HKARK L R
Sbjct: 356 LQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSR 415

Query: 68  SNGTYPDDCEIAKFTGLSVAKI 3
           S+G +P D EIAKFTGLS A+I
Sbjct: 416 SHGKFPADDEIAKFTGLSTARI 437


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  273 bits (699), Expect = 4e-71
 Identities = 144/264 (54%), Positives = 187/264 (70%), Gaps = 12/264 (4%)
 Frame = -2

Query: 758 SFRLSSAPTENVDEPRLNDLVENQVGKVVIXXXXXXXXXXXXXXXXXXXSD--------- 606
           SF L SAPTE++ E + N  V++ + KVV+                    +         
Sbjct: 179 SFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSK 238

Query: 605 TLQEDXXXXXXXXXXXXRN---KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPS 435
           T+++              N   K+L  A+NEAEMS GVK+VA LE++R  LE++ G + S
Sbjct: 239 TIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVAS 298

Query: 434 LSSWAEAAGVEKKELQRRLNYGWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKV 255
           LS+WAEAAGV+KK LQ++L +GW+CRDELL ST SLVL+IARNY G+GVAFED++QAG +
Sbjct: 299 LSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNL 358

Query: 254 GVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKAL 75
           GVLQGAERFD T+GY+FSTYVQYW+RKSMSTLVARH+RG++IP TL++A+ Q+ KARKAL
Sbjct: 359 GVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKAL 418

Query: 74  RRSNGTYPDDCEIAKFTGLSVAKI 3
            +S+G YPDD EIAKFTGLS+AKI
Sbjct: 419 YKSHGRYPDDNEIAKFTGLSLAKI 442


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  273 bits (699), Expect = 4e-71
 Identities = 144/264 (54%), Positives = 187/264 (70%), Gaps = 12/264 (4%)
 Frame = -2

Query: 758  SFRLSSAPTENVDEPRLNDLVENQVGKVVIXXXXXXXXXXXXXXXXXXXSD--------- 606
            SF L SAPTE++ E + N  V++ + KVV+                    +         
Sbjct: 229  SFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSK 288

Query: 605  TLQEDXXXXXXXXXXXXRN---KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPS 435
            T+++              N   K+L  A+NEAEMS GVK+VA LE++R  LE++ G + S
Sbjct: 289  TIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVAS 348

Query: 434  LSSWAEAAGVEKKELQRRLNYGWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKV 255
            LS+WAEAAGV+KK LQ++L +GW+CRDELL ST SLVL+IARNY G+GVAFED++QAG +
Sbjct: 349  LSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNL 408

Query: 254  GVLQGAERFDQTRGYKFSTYVQYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKAL 75
            GVLQGAERFD T+GY+FSTYVQYW+RKSMSTLVARH+RG++IP TL++A+ Q+ KARKAL
Sbjct: 409  GVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKAL 468

Query: 74   RRSNGTYPDDCEIAKFTGLSVAKI 3
             +S+G YPDD EIAKFTGLS+AKI
Sbjct: 469  YKSHGRYPDDNEIAKFTGLSLAKI 492


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           lycopersicum]
          Length = 551

 Score =  268 bits (686), Expect = 1e-69
 Identities = 140/262 (53%), Positives = 181/262 (69%), Gaps = 12/262 (4%)
 Frame = -2

Query: 752 RLSSAPTENVDEPRLNDLVENQVGKVVIXXXXXXXXXXXXXXXXXXXSD---------TL 600
           ++   P E + E   +DLV N + KVV+                   +D          +
Sbjct: 172 KVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNI 231

Query: 599 QEDXXXXXXXXXXXXR---NKKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLS 429
           QED                 K+ K+A+NEAEMS GVK+VA+LE++R  LE++ G++ + S
Sbjct: 232 QEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFS 291

Query: 428 SWAEAAGVEKKELQRRLNYGWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGV 249
           SWA+AAG+E+KELQ+ L++GW+CRDELL STRSLVL++ARNY GLGVAFEDLIQAG +GV
Sbjct: 292 SWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGV 351

Query: 248 LQGAERFDQTRGYKFSTYVQYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRR 69
           LQGA RFD TRGYKFSTYVQYW+RKS+S LVA+H+RG+RIP T+ K +NQ+HKARK L R
Sbjct: 352 LQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSR 411

Query: 68  SNGTYPDDCEIAKFTGLSVAKI 3
           S+G +P D EIAKFTGLS A+I
Sbjct: 412 SHGKFPADDEIAKFTGLSTARI 433


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  259 bits (662), Expect = 7e-67
 Identities = 124/183 (67%), Positives = 156/183 (85%)
 Frame = -2

Query: 551  NKKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNY 372
            +++L++ARNEAEMS GVK+VA LE++R  LE++ G   SLS WAEAAGV +K LQ+ L +
Sbjct: 547  SRRLRIARNEAEMSKGVKVVANLERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRF 606

Query: 371  GWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYV 192
            GW+CRDELL STRSLVL+ ARNY GLG+A EDLIQAG +GVLQGAERFD TRGY+FSTYV
Sbjct: 607  GWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYV 666

Query: 191  QYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSV 12
            Q+W+RKS+S +VARH+RGI++P TLS+A+ Q+ KARKAL +S+G YPD+  IAKFTGLS+
Sbjct: 667  QFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSL 726

Query: 11   AKI 3
            AKI
Sbjct: 727  AKI 729


>gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlisea aurea]
          Length = 463

 Score =  258 bits (660), Expect = 1e-66
 Identities = 119/182 (65%), Positives = 151/182 (82%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           KK ++ ++E++M++G K+V ELE++R ++E + GE PS S WAEAA +E KEL+RRLNYG
Sbjct: 171 KKQRITQSESDMAAGFKLVTELERIRKKVEDESGETPSFSRWAEAARIESKELKRRLNYG 230

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           WHCRD+LL S+RSLV+FIARNYWGLG+AFEDLIQAG + VL+GAERFDQ+RGYKFSTYVQ
Sbjct: 231 WHCRDQLLKSSRSLVVFIARNYWGLGIAFEDLIQAGNMAVLRGAERFDQSRGYKFSTYVQ 290

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVA 9
           YW+RKSMS LVA HSRGIRIP T++K +NQV  ARK L  + G  P D E+AK TG+S+ 
Sbjct: 291 YWIRKSMSMLVANHSRGIRIPGTMNKVINQVQNARKQLCAATGRTPSDLEVAKLTGISLE 350

Query: 8   KI 3
           +I
Sbjct: 351 RI 352


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
           subsp. vesca]
          Length = 545

 Score =  255 bits (651), Expect = 1e-65
 Identities = 120/183 (65%), Positives = 162/183 (88%)
 Frame = -2

Query: 551 NKKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNY 372
           +++L +A+NEAEMS GVK++A+LE+L++ LEK+ G++P+L  WAEAAGV++K LQ++L++
Sbjct: 243 SRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPTLRCWAEAAGVDEKVLQQQLHF 302

Query: 371 GWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYV 192
           GW+C+DEL+ STRSLVL++ARNY GLGVA +DL+QAG +G+LQGAERFD +RGY+FSTYV
Sbjct: 303 GWYCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGNLGLLQGAERFDPSRGYRFSTYV 362

Query: 191 QYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSV 12
           QYW+RKSMS LVA+H+RGI+IP+TLSKA+N++ KARKA   S+  YPDD EIAK TGLS+
Sbjct: 363 QYWIRKSMSRLVAQHARGIKIPNTLSKAINRIQKARKANYNSHMKYPDDEEIAKITGLSL 422

Query: 11  AKI 3
           AKI
Sbjct: 423 AKI 425


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score =  250 bits (639), Expect = 3e-64
 Identities = 119/183 (65%), Positives = 156/183 (85%)
 Frame = -2

Query: 551 NKKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNY 372
           +++L +ARNEAEM+ G+K++A+LEK+R  LE++   + SLS WAEAAG++ K LQ++L++
Sbjct: 259 SRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSF 318

Query: 371 GWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYV 192
           GW+CRDEL+ STRSLVL+ ARNY G G+A EDL+QAG +GVL+GAERFD TRGY+FSTYV
Sbjct: 319 GWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYV 378

Query: 191 QYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSV 12
           QYW+RKSMS +V+R +RGI+IP TLS+A+ Q+ KARKAL  SNG YPDD EIAK+TGLS+
Sbjct: 379 QYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSL 438

Query: 11  AKI 3
           AKI
Sbjct: 439 AKI 441


>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
           gi|482559522|gb|EOA23713.1| hypothetical protein
           CARUB_v10016920mg [Capsella rubella]
          Length = 581

 Score =  249 bits (635), Expect = 1e-63
 Identities = 120/183 (65%), Positives = 154/183 (84%), Gaps = 1/183 (0%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           K+ +++RNEAEMS+GVK+VA++E++R +LE++ G++ SLS WAEAAG+ +K L R L+YG
Sbjct: 280 KRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 339

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           W+CRDELL STRSLVLF+ARNY GLG+A EDLIQAG VGVLQGAERFD  RGYKFSTYVQ
Sbjct: 340 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGFVGVLQGAERFDHARGYKFSTYVQ 399

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSV 12
           YW+RKSMS +V+RH+RG+ IPS++ + +NQ+ KARK L+ S+G  YP D EI+K T LSV
Sbjct: 400 YWIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEEISKLTSLSV 459

Query: 11  AKI 3
            KI
Sbjct: 460 KKI 462


>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323785|gb|EFH54206.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  249 bits (635), Expect = 1e-63
 Identities = 119/183 (65%), Positives = 155/183 (84%), Gaps = 1/183 (0%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           K+ ++++NEAEMS+GVK+VA++E++R +LE++ G++ SLS WAEAAG+ +K L R L+YG
Sbjct: 267 KRERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYG 326

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           W+CRDELL STRSLVLF+ARNY GLG+A EDLIQAG VGVLQGAERFD TRGYKFSTYVQ
Sbjct: 327 WYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQ 386

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSV 12
           YW+RKSMS +V+RH+RG+ IPS++ + +NQ+ KARK L+ S+G  YP D +I+K T LSV
Sbjct: 387 YWIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEDISKLTSLSV 446

Query: 11  AKI 3
            KI
Sbjct: 447 KKI 449


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
           gi|222854562|gb|EEE92109.1| hypothetical protein
           POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score =  248 bits (633), Expect = 2e-63
 Identities = 114/183 (62%), Positives = 155/183 (84%)
 Frame = -2

Query: 551 NKKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNY 372
           +++  +ARNEA+M+ GVK+ ++LE++R  LE++ G++ SLS WAEA G++KK LQ++L +
Sbjct: 258 SRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLSCWAEATGLDKKVLQQQLQF 317

Query: 371 GWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYV 192
           GW+CRDEL+ +T SLVL+IARNY G+G+A EDLIQAG +G+LQGAERFD TRGY+FSTYV
Sbjct: 318 GWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGLLQGAERFDPTRGYRFSTYV 377

Query: 191 QYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSV 12
           QYW+RKSM  +V RH+RGI+IP  LS+++N++ KARKAL  S+G YPDD E+AKFTGLS+
Sbjct: 378 QYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARKALSNSHGRYPDDWEVAKFTGLSL 437

Query: 11  AKI 3
           AKI
Sbjct: 438 AKI 440


>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553990|gb|ESR64004.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 442

 Score =  246 bits (629), Expect = 5e-63
 Identities = 114/182 (62%), Positives = 153/182 (84%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           ++L +ARNEAEMS GV++VA LE+++  LEK+ G+  SL+ WA+AAGV ++ L++ L +G
Sbjct: 234 RRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFG 293

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           W+CR+EL+ STR LVLF+ARNY GLG+ F DL+QAG VGVLQGAERFD TRGYKFSTYVQ
Sbjct: 294 WYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQ 353

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVA 9
           YW+RKS+S +VARH+RGI+IP  L++ ++++ KARKAL  S+G YP+D EIAK+TGLS+A
Sbjct: 354 YWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLA 413

Query: 8   KI 3
           +I
Sbjct: 414 EI 415


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553989|gb|ESR64003.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score =  246 bits (629), Expect = 5e-63
 Identities = 114/182 (62%), Positives = 153/182 (84%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           ++L +ARNEAEMS GV++VA LE+++  LEK+ G+  SL+ WA+AAGV ++ L++ L +G
Sbjct: 234 RRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFG 293

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           W+CR+EL+ STR LVLF+ARNY GLG+ F DL+QAG VGVLQGAERFD TRGYKFSTYVQ
Sbjct: 294 WYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQ 353

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVA 9
           YW+RKS+S +VARH+RGI+IP  L++ ++++ KARKAL  S+G YP+D EIAK+TGLS+A
Sbjct: 354 YWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLA 413

Query: 8   KI 3
           +I
Sbjct: 414 EI 415


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score =  245 bits (626), Expect = 1e-62
 Identities = 114/178 (64%), Positives = 151/178 (84%)
 Frame = -2

Query: 536 VARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYGWHCR 357
           +A+NEAEMS G+K+VA+LEK+++ LEK+ G+  SL+ WAEAAG+++K LQ  L++GW+CR
Sbjct: 253 IAKNEAEMSRGIKVVAQLEKVKLTLEKETGKAVSLNCWAEAAGIDEKVLQHDLHFGWYCR 312

Query: 356 DELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQYWVR 177
           DELL S RSLVL+++R Y GLGVA EDL+QAG +G+LQGAERFD TRGY+FSTYVQYW+R
Sbjct: 313 DELLKSGRSLVLYLSRYYRGLGVAHEDLMQAGNIGILQGAERFDHTRGYQFSTYVQYWIR 372

Query: 176 KSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKI 3
           K+MS LV+RH RGI++P+TLS  +N+V KARK L+RS G +PDD E++K TGLS+ KI
Sbjct: 373 KAMSQLVSRHGRGIKVPTTLSTTINRVQKARKILKRSQGKHPDDVEVSKSTGLSLDKI 430


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score =  244 bits (624), Expect = 2e-62
 Identities = 113/182 (62%), Positives = 152/182 (83%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           ++L +ARNEAEMS GV++VA LE+++  LEK+ G+   L+ WA+AAGV ++ L++ L +G
Sbjct: 234 RRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAARLNCWAQAAGVSERVLKQHLAFG 293

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           W+CR+EL+ STR LVLF+ARNY GLG+ F DL+QAG VGVLQGAERFD TRGYKFSTYVQ
Sbjct: 294 WYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQ 353

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVA 9
           YW+RKS+S +VARH+RGI+IP  L++ ++++ KARKAL  S+G YP+D EIAK+TGLS+A
Sbjct: 354 YWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLA 413

Query: 8   KI 3
           +I
Sbjct: 414 EI 415


>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
           gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
           polymerase sigma factor sigC; Short=Sigma factor C;
           Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
           sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
           Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
           [Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
           [Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
           factor SigC [Arabidopsis thaliana]
           gi|7630012|emb|CAB88354.1| sigma factor SigC
           [Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
           At3g53920 [Arabidopsis thaliana]
           gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
           C [Arabidopsis thaliana]
          Length = 571

 Score =  244 bits (623), Expect = 2e-62
 Identities = 118/183 (64%), Positives = 152/183 (83%), Gaps = 1/183 (0%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           K+ +++RNE EMS+GVK+VA++E++R +LE++ G++ SLS WA AAG+ +K L R L+YG
Sbjct: 270 KRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYG 329

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           W+CRDEL+ STRSLVLF+ARNY GLG+A EDLIQAG VGVLQGAERFD TRGYKFSTYVQ
Sbjct: 330 WYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQ 389

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSV 12
           YW+RKSMST+V+RH+RG+ IPS++ + +N + KARK L+ S+G  Y  D EIAK TG SV
Sbjct: 390 YWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSV 449

Query: 11  AKI 3
            KI
Sbjct: 450 KKI 452


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
           gi|462419859|gb|EMJ24122.1| hypothetical protein
           PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  244 bits (623), Expect = 2e-62
 Identities = 115/183 (62%), Positives = 155/183 (84%)
 Frame = -2

Query: 551 NKKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNY 372
           +++L +++NEAEMS GVK++A+LE+++  LEK+ G++ +L  WAEAAGV +K L + L +
Sbjct: 254 SRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVATLRCWAEAAGVHEKVLLQHLRF 313

Query: 371 GWHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYV 192
           GW+C+DEL+ STRSLVL++ARNY GLGVA +DL+QAG +G+LQGAERFD +RGY+FSTYV
Sbjct: 314 GWYCQDELIRSTRSLVLYLARNYRGLGVALDDLMQAGNLGLLQGAERFDHSRGYRFSTYV 373

Query: 191 QYWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSV 12
           QYW+RKSMS LVA+H+RG++IP TLSKA+NQ+ KARKA   S+  YPDD EIAK TGLS+
Sbjct: 374 QYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSL 433

Query: 11  AKI 3
           A+I
Sbjct: 434 ARI 436


>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
          Length = 571

 Score =  243 bits (621), Expect = 4e-62
 Identities = 117/183 (63%), Positives = 152/183 (83%), Gaps = 1/183 (0%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           K+ +++RNE EMS+GVK+VA++E++R +LE++ G++ SLS WA AAG+ +K L R L+YG
Sbjct: 270 KRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYG 329

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           W+CRDEL+ STRSLVLF+ARNY G+G+A EDLIQAG VGVLQGAERFD TRGYKFSTYVQ
Sbjct: 330 WYCRDELVKSTRSLVLFLARNYRGMGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQ 389

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSV 12
           YW+RKSMST+V+RH+RG+ IPS++ + +N + KARK L+ S+G  Y  D EIAK TG SV
Sbjct: 390 YWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSV 449

Query: 11  AKI 3
            KI
Sbjct: 450 KKI 452


>emb|CAB83107.1| sigma factor 3 [Sinapis alba]
          Length = 567

 Score =  241 bits (614), Expect = 3e-61
 Identities = 114/183 (62%), Positives = 153/183 (83%), Gaps = 1/183 (0%)
 Frame = -2

Query: 548 KKLKVARNEAEMSSGVKMVAELEKLRMRLEKDGGEMPSLSSWAEAAGVEKKELQRRLNYG 369
           K+ +++RNEAEMS GVK+VA++E++R +LE++ G++ S+S WAEAAG+ +K L   L++G
Sbjct: 266 KRERISRNEAEMSQGVKIVADMERIRTKLEEETGKVASMSCWAEAAGMNQKLLMHNLHFG 325

Query: 368 WHCRDELLTSTRSLVLFIARNYWGLGVAFEDLIQAGKVGVLQGAERFDQTRGYKFSTYVQ 189
           W+CRDEL+ STRSLVLF+ARNY GLG+A EDLIQAG VGVLQGAERFD TRGYKFSTYV+
Sbjct: 326 WYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVR 385

Query: 188 YWVRKSMSTLVARHSRGIRIPSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSV 12
           YW+RKSMST+V+RH+RG+ IP+++ + ++Q+ KARK L+ S G  YP D EI+K TG S+
Sbjct: 386 YWIRKSMSTMVSRHARGVHIPASIIRTMSQIQKARKTLKTSQGIKYPADEEISKLTGYSL 445

Query: 11  AKI 3
            KI
Sbjct: 446 KKI 448