BLASTX nr result

ID: Mentha28_contig00003170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00003170
         (822 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015750.1| F-box and associated interaction domains-con...    65   3e-08
ref|XP_006344012.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   6e-06

>ref|XP_007015750.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|590586605|ref|XP_007015751.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|508786113|gb|EOY33369.1| F-box
           and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508786114|gb|EOY33370.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 387

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 12/254 (4%)
 Frame = -2

Query: 749 SYLSVYSVPEFSLIQSHILPIYKR---GKFVGSHCKGLYFYTDLMHNFVLIDLTTKVFKP 579
           S LS      FS+ ++  LP ++       V   C GL    D      L + +T+ FK 
Sbjct: 78  SALSTEKGENFSVTENIHLPFFENCWYAPVVSGPCNGLLCLHDA-GKAALWNPSTREFK- 135

Query: 578 LSLPKLKPTRIPEVHTC-----GIGLDPVSDVYEIL--VVYHFSKIGIDGHKVYQGFKNR 420
             LP+    R P V +      G G D ++D Y+++  V  +F +   +G      + ++
Sbjct: 136 -ILPRSSVNRPPSVDSTSFGCLGFGFDSITDDYKVVRFVTNYFDENEEEGGLA--DWIHQ 192

Query: 419 AHLYSLGTDSWTEVPCPDT--FTSNFDSVYIGHERYWTALIDGPNPVPVDGVYFVEDEVV 246
             LYSL +DSW E+  P+   + S   + Y+    YW A  +             +  ++
Sbjct: 193 VELYSLKSDSWKEISVPEAHPYASPLFNNYVNGSYYWQATGNS------------DYLIL 240

Query: 245 SFNFRSKKFKVFPLPAYPIKNYKYKYNLIEYDGMLGAIGYLKNEGPTEYVIWEYKERSWH 66
           SF+  ++KF   PLP +     +Y   L++++G LGAI Y +        +W        
Sbjct: 241 SFDMANEKFSTLPLPTFGGSLAQYYLQLLDFNGSLGAIVYPREGTEKSIDLWVMNGSWTR 300

Query: 65  QVRTFSFGCVEKAL 24
           Q    S   VE+ L
Sbjct: 301 QFSIESVSGVERPL 314


>ref|XP_006344012.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 397

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
 Frame = -2

Query: 656 CKGLYFYTDLMHNFVLIDLTTKVFKPLSLPKLKPTRIPEVHTCGIGLDPVSDVYEILVVY 477
           C GL F  D +   +L + TT++ K  +LP ++P         G G D + D Y++L ++
Sbjct: 113 CNGLIFLADYLECSLLWNPTTRMHK--NLPDIRPRWKKYYVEYGFGYDELRDDYKVLGIF 170

Query: 476 HFSKIGIDGHKVYQGFKNRAHLYSLGTDSWTEV-----PCPDTFTSN------FDSVYIG 330
            +++ G+DG +V         +YSL +DSWT V        +T  SN      +   ++ 
Sbjct: 171 -YNRCGLDGGEV--------KIYSLKSDSWTSVDYIGEEILNTSDSNRKMRLGYSGFFVN 221

Query: 329 HERYWTALIDGPNPVPVDGVYFVEDEVVSFNFRSKKFKVFPLPAYPI 189
            + +W  +  GPNP  V        +++ F+  ++K++    P+Y +
Sbjct: 222 GKLHWDTITFGPNPGDVCRC----RDIIYFDLANEKWEKVEKPSYGV 264


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