BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00001974
         (1398 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45954.1| hypothetical protein MIMGU_mgv1a007767mg [Mimulus...   482   e-133
ref|XP_004241212.1| PREDICTED: transcription initiation factor I...   440   e-121
ref|XP_006350788.1| PREDICTED: transcription initiation factor I...   437   e-120
ref|XP_002520518.1| protein with unknown function [Ricinus commu...   398   e-108
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241...   384   e-104
ref|XP_007016334.1| Transcription initiation factor IIA subunit ...   375   e-101
ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Popu...   370   1e-99
ref|XP_004486980.1| PREDICTED: transcription initiation factor I...   368   4e-99
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr...   363   1e-97
ref|XP_002298340.1| transcription factor IIA large subunit famil...   362   2e-97
ref|XP_004143132.1| PREDICTED: transcription initiation factor I...   362   3e-97
gb|EXC10718.1| Transcription initiation factor IIA large subunit...   360   6e-97
ref|XP_007205331.1| hypothetical protein PRUPE_ppa006992mg [Prun...   358   3e-96
ref|XP_007150517.1| hypothetical protein PHAVU_005G159000g [Phas...   356   2e-95
ref|XP_007150356.1| hypothetical protein PHAVU_005G146700g [Phas...   353   8e-95
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...   353   8e-95
ref|XP_003537974.1| PREDICTED: transcription initiation factor I...   350   1e-93
ref|XP_003597404.1| Transcription factor/ transcription initiati...   350   1e-93
ref|XP_006369541.1| hypothetical protein POPTR_0001s25120g [Popu...   348   4e-93
ref|XP_006595034.1| PREDICTED: transcription initiation factor I...   346   2e-92

>gb|EYU45954.1| hypothetical protein MIMGU_mgv1a007767mg [Mimulus guttatus]
          Length = 396

 Score =  482 bits (1241), Expect = e-133
 Identities = 256/399 (64%), Positives = 280/399 (70%), Gaps = 22/399 (5%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            S++TSNVYIHVIEDVINKVRDEF   GGPG+GVL+ELQGLWELKMM+AGAILGPIDRSA 
Sbjct: 3    SSTTSNVYIHVIEDVINKVRDEFNGGGGPGEGVLSELQGLWELKMMEAGAILGPIDRSAS 62

Query: 992  QKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXP----GMAQTPL 825
            QKGAGGPITP PVHDLNV           TAD                     GMAQTPL
Sbjct: 63   QKGAGGPITPNPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPLPGTAQTPLPGMAQTPL 122

Query: 824  PGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSSW 645
            PGTAQTPL G+DS S YNIPTGGTPITPNEY S N+N G  ++K G GRPS YM PPS W
Sbjct: 123  PGTAQTPLTGSDSGSLYNIPTGGTPITPNEYVSPNDNVGVSEVKAGPGRPSPYMQPPSPW 182

Query: 644  LSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQD 465
             +QRP LDVNVAYVEGREE ++GG +   TQDFF + SGKRKRD+ PP +Q+GGYIPQQD
Sbjct: 183  QNQRPPLDVNVAYVEGREESERGGPHQQTTQDFF-VASGKRKRDNFPPQYQAGGYIPQQD 241

Query: 464  GAGDVLSEVLKVGPGSISKMPDQEGSLSCRIPQLDGPIPDPYDDSLSTPNIYNYQ-GVIN 288
            GAGD LS+ +KV    +  +  Q G+ S RIPQ DGPIPDPYDD LSTPNIYNYQ GV+N
Sbjct: 242  GAGDNLSDEMKV----VLDVIGQGGTSSSRIPQSDGPIPDPYDDVLSTPNIYNYQGGVVN 297

Query: 287  EDYNIVNTPMPNEMQA-----------------PTXXXXXXXXXXXXXXXXPLXXXXXLA 159
            EDYNIVNTPMPNEM A                 P                        LA
Sbjct: 298  EDYNIVNTPMPNEMLAATPAPVQNDVIDDDEDEPLNEDDDDDGDELDEGEDLNTTHLVLA 357

Query: 158  QFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
            QFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKATGEFDF
Sbjct: 358  QFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 396


>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Solanum lycopersicum]
          Length = 401

 Score =  440 bits (1132), Expect = e-121
 Identities = 235/404 (58%), Positives = 271/404 (67%), Gaps = 27/404 (6%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            S++TSNVYIHVIEDVI+KVRDEFIN+GGPG+ +L ELQ LWE+KMM AGAILG I+R++ 
Sbjct: 3    SSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERNSA 62

Query: 992  QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXP----GMAQTP 828
             K   GGPITP  VHDLN+           TAD                     G  QTP
Sbjct: 63   AKATPGGPITP--VHDLNMPYEGNEEYETPTADILFPPTPLQTPLPGTAQTPLPGTVQTP 120

Query: 827  LPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSS 648
            LPGTAQTPLPG   SS YNIPTGGTP TP++YS  N+ GG  ++K G GRPS +MHPPS 
Sbjct: 121  LPGTAQTPLPGTADSSMYNIPTGGTPFTPSDYSPLNDTGGATELKAGPGRPSPFMHPPSP 180

Query: 647  WLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQ 468
            WL+QRP LDVNVAYVEGREEGD+GG+    TQDFF+  +GKRKR+D PP + +GGYIPQQ
Sbjct: 181  WLNQRPPLDVNVAYVEGREEGDRGGSQQPMTQDFFMNSTGKRKREDFPPQYHNGGYIPQQ 240

Query: 467  DGAGDVLSEVLKVGPGS------ISKMPDQEGSLSCRIPQLDGPIPDPYDDSLSTPNIYN 306
            DGA D + + +K G GS      ++  P Q  + + RIPQ DGPIPD YDD+LSTPNIY 
Sbjct: 241  DGAADSIYDNIKSGEGSNIQLELVTVGPVQ--APAYRIPQFDGPIPDSYDDALSTPNIY- 297

Query: 305  YQGVINEDYNIVNTPMPNEMQAPT----------------XXXXXXXXXXXXXXXXPLXX 174
            YQGV+NEDYNIVNTP PN+MQAPT                                    
Sbjct: 298  YQGVVNEDYNIVNTPAPNDMQAPTPAPLQNDDIDDDDEPLNEDDDDELDDVDQGEDLNTA 357

Query: 173  XXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
               LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKA GEFDF
Sbjct: 358  HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 401


>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Solanum tuberosum]
          Length = 403

 Score =  437 bits (1123), Expect = e-120
 Identities = 236/406 (58%), Positives = 270/406 (66%), Gaps = 29/406 (7%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            S++TSNVYIHVIEDVI+KVRDEFIN+GGPG+ +L ELQ LWE+KMM AGAILG I+R++ 
Sbjct: 3    SSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERNSA 62

Query: 992  QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXP----GMAQTP 828
             K   GGPITP  VHDLN+           TAD                     G  QTP
Sbjct: 63   AKATPGGPITP--VHDLNMPYEGNEEYETPTADILFPPTPLQTPLPGTAQTPLPGTVQTP 120

Query: 827  LPGTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSS 648
            LPGTAQTPLPG   SS YNIPTGGTP TP++YS  N+ GG  ++K G GRPS +MHPPS 
Sbjct: 121  LPGTAQTPLPGTADSSMYNIPTGGTPFTPSDYSPLNDTGGATELKAGPGRPSPFMHPPSP 180

Query: 647  WLSQRPSLDVNVAYVEGREE-GDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQ 471
            WL+QRP LDVNVAYVEGREE GD+GG+    TQDFF+  +GKRKR+D PP + +GGYIPQ
Sbjct: 181  WLNQRPPLDVNVAYVEGREEVGDRGGSQQPMTQDFFMNSAGKRKREDFPPQYHNGGYIPQ 240

Query: 470  QDGAGDVLSEVLKVGPGS------ISKMPDQEGSLSCRIPQLDGPIPDPYDDSLSTPNIY 309
            QDGA D + + LK G GS      ++  P Q  +   RIPQ DGPIPD YDD+LSTPNIY
Sbjct: 241  QDGAADSIYDNLKSGEGSNIQLELVTVGPVQASAY--RIPQFDGPIPDSYDDALSTPNIY 298

Query: 308  NYQGVINEDYNIVNTPMPNEMQAPT-----------------XXXXXXXXXXXXXXXXPL 180
             YQGV+NEDYNIVNTP PN+MQAPT                                   
Sbjct: 299  -YQGVVNEDYNIVNTPAPNDMQAPTPAPALQNDDIDDDDEPLNEDDDDDLDDVDQGEDLN 357

Query: 179  XXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                 LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKA GEFDF
Sbjct: 358  TAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 403


>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
            gi|223540360|gb|EEF41931.1| protein with unknown function
            [Ricinus communis]
          Length = 383

 Score =  398 bits (1022), Expect = e-108
 Identities = 228/406 (56%), Positives = 259/406 (63%), Gaps = 25/406 (6%)
 Frame = -2

Query: 1184 MASTSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPID 1005
            MA+TST+TS VYIHVIEDV+NKVRDEFIN+G PG+ VL ELQ +WELKMMQAG I GPI+
Sbjct: 1    MAATSTTTSTVYIHVIEDVVNKVRDEFINNG-PGETVLNELQAIWELKMMQAGVICGPIE 59

Query: 1004 RSAKQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPL 825
            RS+  K   G +  TPVHDLNV           TA+                     TPL
Sbjct: 60   RSSGAKTVPGGVI-TPVHDLNVPYEGTEEYETPTAEIL----------------FPPTPL 102

Query: 824  PGTAQTPLPGN-DSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSS 648
            PGTAQTPLPG+ D+SS YNIPTG T   P   S   ++GG  + K  AGRPS YM PPS 
Sbjct: 103  PGTAQTPLPGSVDNSSMYNIPTGPTSEYPTPVS---DSGGSTEAK--AGRPSPYMQPPSP 157

Query: 647  WLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQ 468
            W++QRP LDVN+AYVEGREE D+G +N   TQDFF   SGKRKR+D    + +GG+IPQQ
Sbjct: 158  WINQRPPLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKREDFAAQYNNGGFIPQQ 217

Query: 467  DGAGDVLSEVLKVGPGSISKMPDQEGSLSCR----IPQLDGPIPDPYDDSLSTPNIYNYQ 300
            DGAGD   EVL+V   ++     +  S   R    IPQLDGPIPDPYDD LSTPNIYNYQ
Sbjct: 218  DGAGDTPFEVLQVERDTVISADIEILSSVTRRGLKIPQLDGPIPDPYDDVLSTPNIYNYQ 277

Query: 299  GVINEDYNIVNTPMPNEMQAPTXXXXXXXXXXXXXXXXPL-------------------- 180
            GV NEDYNI NTP PN++QA T                PL                    
Sbjct: 278  GVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNEDDDDDDDLDDVDQGEDMN 337

Query: 179  XXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                 LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKATGEFDF
Sbjct: 338  TQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 383


>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
            gi|297746029|emb|CBI16085.3| unnamed protein product
            [Vitis vinifera]
          Length = 393

 Score =  384 bits (985), Expect = e-104
 Identities = 216/414 (52%), Positives = 249/414 (60%), Gaps = 37/414 (8%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            S+ TS VY+ VIEDVINKVRDEF+N+GGPG+ VL+ELQG+WE+KM+QAG + GPI+RS  
Sbjct: 4    SSMTSTVYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIERSTA 63

Query: 992  QKGAGGPITPT-PVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 816
             K   G   PT PVHDLNV           TA+                     TPL   
Sbjct: 64   PKQTSGAPAPTPPVHDLNVPYEGTEEYETPTAEIL----------------FPPTPLQTP 107

Query: 815  AQTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSSWLSQ 636
             QTPLPG   +S YNIPTG     P EY +  + GG   +K  +GRP  YM PPS W+ Q
Sbjct: 108  IQTPLPGMGDNSMYNIPTG-----PTEYPAAQDGGGATDMK--SGRPPSYMPPPSPWMQQ 160

Query: 635  RP--SLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDG 462
            RP  S+DVNVAYVEGR+EGD+G +    TQDFF+M SGKRKR+D P  + + GYIPQQDG
Sbjct: 161  RPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDG 220

Query: 461  AGDVLSEVLKV----GPGSISK-----------MPDQEGSLSCRIPQLDGPIPDPYDDSL 327
            AGD   EV +V    G  SI              P   GS   RIPQLDGPIPDPY+D L
Sbjct: 221  AGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSY-VRIPQLDGPIPDPYEDVL 279

Query: 326  STPNIYNYQGVINEDYNIVNTPMPNEMQA-------------------PTXXXXXXXXXX 204
            STPNIYNYQGV+NEDYNIVNTP PN++QA                   P           
Sbjct: 280  STPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDDEPPLNENDDDDLDD 339

Query: 203  XXXXXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                         LAQFDKVTRTKS+WKCTLKDGIMH+NNKDILFNKA GEFDF
Sbjct: 340  VEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFNKANGEFDF 393


>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
            gi|508786697|gb|EOY33953.1| Transcription initiation
            factor IIA subunit 1 [Theobroma cacao]
          Length = 393

 Score =  375 bits (964), Expect = e-101
 Identities = 219/415 (52%), Positives = 251/415 (60%), Gaps = 38/415 (9%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSA- 996
            S++TS VYIHVIEDVINKVRDEFIN+GGPG+ VL ELQG+WE+KMMQAG + GPI+RS+ 
Sbjct: 3    SSTTSAVYIHVIEDVINKVRDEFINNGGPGETVLNELQGIWEMKMMQAGVVCGPIERSSG 62

Query: 995  -KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPG 819
             KQ   GGPI  TPVHDLNV           TAD                     TPL  
Sbjct: 63   QKQPTPGGPI--TPVHDLNVPYEGPEEYETPTADML----------------FPPTPLQT 104

Query: 818  TAQTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSSWLS 639
               TPLPG+   S YNIPTG      ++Y +   +GG G       RPS YM  PS W +
Sbjct: 105  PVPTPLPGSADGSMYNIPTGS-----SDYPTPVTDGG-GNTDAKGARPSPYMQSPSPWPN 158

Query: 638  QRP--SLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQS-GGYIPQQ 468
            QR   S+DVNVAYVEGR+E D+G ++   TQDFF+M SGKRKR+D    + + GGYIPQQ
Sbjct: 159  QRTPLSVDVNVAYVEGRDEVDRGPSHQPLTQDFFMMSSGKRKREDFTTQYHNGGGYIPQQ 218

Query: 467  DGAGDVLSEVLKVGPGSISKMPDQEGSL--------------SCRIPQLDGPIPDPYDDS 330
            DGAGD + EV K      S   D+  S               S +IPQLDGPIPDPYDD 
Sbjct: 219  DGAGDAIYEVAKAEGSKGSDFLDRRDSTTTAKSEILAHLARSSSKIPQLDGPIPDPYDDM 278

Query: 329  LSTPNIYNYQGVINEDYNIVNTPMPNEMQAPTXXXXXXXXXXXXXXXXPL---------- 180
            LSTPNIYNYQGV+NEDYN+VNTP PN++QA T                PL          
Sbjct: 279  LSTPNIYNYQGVVNEDYNVVNTPAPNDLQAATPAPVAQNDTGDDDDDEPLNEDDDDDELD 338

Query: 179  ---------XXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                          LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKATGEFDF
Sbjct: 339  DVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 393


>ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
            gi|550348134|gb|ERP66111.1| hypothetical protein
            POPTR_0001s25120g [Populus trichocarpa]
          Length = 405

 Score =  370 bits (949), Expect = 1e-99
 Identities = 221/416 (53%), Positives = 257/416 (61%), Gaps = 35/416 (8%)
 Frame = -2

Query: 1184 MASTSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPID 1005
            MAS++TST  VY  VIEDVI+KVRDEFIN+GGPG+ VL+ELQGLWE K+MQAG + GPI 
Sbjct: 1    MASSATST--VYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIV 58

Query: 1004 RSA--KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQT 831
            RS+  KQ   GG    TPVHDLNV           TA+                PG  QT
Sbjct: 59   RSSANKQLVPGGL---TPVHDLNVPYEGTEEYETPTAEILFPPTPLPGSAQTPLPGNVQT 115

Query: 830  PLPGTAQTPLPGN-DSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPP 654
            PLPG   TPLPG+ D+SS YNI TG +   P   S     GG   +K  AGRPS +M  P
Sbjct: 116  PLPGNVPTPLPGSVDNSSMYNISTGSSSDYPTPVSDA---GGSTDVK--AGRPSHFMQSP 170

Query: 653  SSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIP 474
            S  + QRP LDVNVAYVEGR+E D+GG++ T TQDFF M SGKRKR D  P + +GG+IP
Sbjct: 171  SPLMHQRPPLDVNVAYVEGRDEVDRGGSHQTLTQDFF-MSSGKRKRGDFAPKYNNGGFIP 229

Query: 473  QQDGAGDVLSEVLKVGPGS---------ISKMPDQEGSLS---CRIPQLDGPIPDPYDDS 330
            QQDGA D  SEV +V  G+          +K  +    +S    +IPQ+DGPIPDPYDD 
Sbjct: 230  QQDGAVDSASEVSQVSQGNNPHGRCDTITTKNREILARVSRSYVKIPQVDGPIPDPYDDM 289

Query: 329  LSTPNIYNYQGVINEDYNIVNTPMPNEMQAPTXXXXXXXXXXXXXXXXPL---------- 180
            LSTPNIYNYQGV NEDYNI NTP PN++QA T                PL          
Sbjct: 290  LSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLNEDDDDDEDL 349

Query: 179  ----------XXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                           LAQFDKVTRTKSRWKCTLKDG+MH+NN+DILFNKATGEF+F
Sbjct: 350  DGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKATGEFEF 405


>ref|XP_004486980.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Cicer arietinum]
          Length = 389

 Score =  368 bits (944), Expect = 4e-99
 Identities = 213/411 (51%), Positives = 245/411 (59%), Gaps = 34/411 (8%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRS-- 999
            +++TS VYI VIEDV+ KVRDEF N+GGPG+ VL ELQ +WE KM+QAGA+LGPI+RS  
Sbjct: 3    ASTTSQVYIDVIEDVMVKVRDEFTNNGGPGEEVLRELQAIWESKMIQAGAVLGPIERSSG 62

Query: 998  AKQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPG 819
            A +   GGPITP  VHDLNV           TA+                     TPL  
Sbjct: 63   ANKPTPGGPITP--VHDLNVPYEGTEEYETPTAEIL----------------FPPTPLQT 104

Query: 818  TAQTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSSWLS 639
              QTPLPG   +  YNIPTG     P++Y S+  +   G   V  GRP  YM PPS W++
Sbjct: 105  PIQTPLPGTGDTPTYNIPTG-----PSDYPSSGNDTAGGNADVKGGRPGTYMQPPSPWIN 159

Query: 638  QRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGA 459
            QRP LDVNVAYVEGREE D+G +N   TQDFF MP GKRKR+D+PP + +GGYIPQQDG+
Sbjct: 160  QRPPLDVNVAYVEGREEADRGASNQPMTQDFFTMPGGKRKRNDLPPQYDAGGYIPQQDGS 219

Query: 458  GDVLSE--VLKVGPGSIS----------KMPDQEGSLSCRIPQLDGPIPDPYDDSLSTPN 315
            GD  S    ++V  G IS          KMP     L+ RIPQLDGPIP   DD LSTPN
Sbjct: 220  GDAASGNFEIEVCGGGISINSQHTSFKGKMPADLERLASRIPQLDGPIPYE-DDVLSTPN 278

Query: 314  IYNYQGVINEDYNIVNTPMPNEMQA--------------------PTXXXXXXXXXXXXX 195
            IYNY GV +EDYNI NTP P E+ A                    P              
Sbjct: 279  IYNYGGVYSEDYNIANTPAPPEVPASTPALVAQNEVANEDDDDEPPLNENDDDDMDDLDQ 338

Query: 194  XXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                      LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKATGEFDF
Sbjct: 339  GDDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 389


>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
            gi|568870376|ref|XP_006488381.1| PREDICTED: transcription
            initiation factor IIA subunit 1-like [Citrus sinensis]
            gi|557526833|gb|ESR38139.1| hypothetical protein
            CICLE_v10028561mg [Citrus clementina]
          Length = 406

 Score =  363 bits (931), Expect = 1e-97
 Identities = 214/419 (51%), Positives = 260/419 (62%), Gaps = 42/419 (10%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSA- 996
            +++T  VYI VIEDVI+KVRDEF+N+G PG+ VL ELQG+WE+KM+QAG I   IDR++ 
Sbjct: 3    TSATGMVYIRVIEDVISKVRDEFVNNG-PGESVLNELQGIWEMKMIQAGVI---IDRTSA 58

Query: 995  -KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPG 819
             KQ   GGPITP  VHDLNV           TA+                PG   TPLPG
Sbjct: 59   PKQPAPGGPITP--VHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPG--STPLPG 114

Query: 818  TA----QTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPS 651
            +      TPLPG   +S YNIPTG +       +  +++GG  + K G GRPS YM PP 
Sbjct: 115  STPLPGSTPLPGTADNSTYNIPTGSSDYP----TPASDSGGNTEAKSGNGRPSSYMPPPP 170

Query: 650  S-WLSQRP--SLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGY 480
            S W++ RP  S+DVNVAYVEGR+E D+G ++   TQDFF M +GKRKR+D P  + +GGY
Sbjct: 171  SPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNGGY 230

Query: 479  -IPQQDGAGDVLSEVLKVGPGSISKMPDQEGSL--------------SCRIPQLDGPIPD 345
             IPQQDGAGD + E+ ++    +S+ P ++ S+              S +IPQLDGPIPD
Sbjct: 231  NIPQQDGAGDAMPEIFEL---EVSEFPGRQDSVTTANREIFANLASSSVKIPQLDGPIPD 287

Query: 344  PYDDSLSTPNIYNYQGVINEDYNIVNTPMPNEMQAPTXXXXXXXXXXXXXXXXPL----- 180
            PYDD LSTPNIYNYQGV+NEDYNIVNTP PN++QA T                PL     
Sbjct: 288  PYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDEPLNENDD 347

Query: 179  -------------XXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                              LAQFDKVTRTKSRWKC LKDGIMH+NNKDILFNKATGEFDF
Sbjct: 348  DELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406


>ref|XP_002298340.1| transcription factor IIA large subunit family protein [Populus
            trichocarpa] gi|222845598|gb|EEE83145.1| transcription
            factor IIA large subunit family protein [Populus
            trichocarpa]
          Length = 409

 Score =  362 bits (929), Expect = 2e-97
 Identities = 219/420 (52%), Positives = 256/420 (60%), Gaps = 39/420 (9%)
 Frame = -2

Query: 1184 MASTSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPID 1005
            MAS++TST  VY  VIEDVI+KVRDEFIN+GGPG+ VL+ELQGLWE K+MQAG + GPI 
Sbjct: 1    MASSATST--VYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIV 58

Query: 1004 RSA--KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQT 831
            RS+  KQ   GG    TPVHDLNV           TA+                PG  QT
Sbjct: 59   RSSANKQLVPGGL---TPVHDLNVPYEGTEEYETPTAEILFPPTPLPGSAQTPLPGNVQT 115

Query: 830  PLPGTAQTPLPGN-DSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPP 654
            PLPG   TPLPG+ D+SS YNI TG +   P   S     GG   +K  AGRPS +M  P
Sbjct: 116  PLPGNVPTPLPGSVDNSSMYNISTGSSSDYPTPVSDA---GGSTDVK--AGRPSHFMQSP 170

Query: 653  SSWLSQRPSLDVNV------------AYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDD 510
            S  + QRP LDVNV            AYVEGR+E D+GG++ T TQDFF M SGKRKR D
Sbjct: 171  SPLMHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQDFF-MSSGKRKRGD 229

Query: 509  VPPPFQSGGYIPQQDGAGDVLSEVLKVGPGSIS----KMPDQEGSLSCRIPQLDGPIPDP 342
              P + +GG+IPQQDGA D  SEV +V   +I+    ++  +      +IPQ+DGPIPDP
Sbjct: 230  FAPKYNNGGFIPQQDGAVDSASEVSQVECDTITTKNREILARVSRSYVKIPQVDGPIPDP 289

Query: 341  YDDSLSTPNIYNYQGVINEDYNIVNTPMPNEMQAPTXXXXXXXXXXXXXXXXPL------ 180
            YDD LSTPNIYNYQGV NEDYNI NTP PN++QA T                PL      
Sbjct: 290  YDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLNEDDDD 349

Query: 179  --------------XXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                               LAQFDKVTRTKSRWKCTLKDG+MH+NN+DILFNKATGEF+F
Sbjct: 350  DEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKATGEFEF 409


>ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Cucumis sativus] gi|449496658|ref|XP_004160191.1|
            PREDICTED: transcription initiation factor IIA large
            subunit-like [Cucumis sativus]
          Length = 402

 Score =  362 bits (928), Expect = 3e-97
 Identities = 210/423 (49%), Positives = 252/423 (59%), Gaps = 46/423 (10%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            +TSTS++YI+VIEDVINK+RDEF+ D GPG+ VL ELQG+WE KMMQAGA+ GPI+RSA 
Sbjct: 2    ATSTSSIYINVIEDVINKLRDEFV-DNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 992  QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 816
             K   GGPITP  VHDLNV           TAD                     TPL   
Sbjct: 61   SKPTPGGPITP--VHDLNVPYEGTEEYETPTADLL----------------FPPTPLQTP 102

Query: 815  AQTPLPGNDSSSFYNIPTG-------GTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHP 657
             QTPLPG   ++ YN+PTG       GT  +P   ++T    G   ++V +GRP+ YM P
Sbjct: 103  IQTPLPGTADNAMYNVPTGPSDHSASGTDASPA--ATTPGGSGNNNVEVRSGRPTPYMQP 160

Query: 656  PSSWLSQRPSLDVNVAYVEGREEG-DKG--GANHTGTQDFFLMPSGKRKRDDVPPPFQSG 486
            PS W+ QR  +DVN+AYVEGREE  D+G  GA+ + TQDFF+M SGKRKRDD    +Q+ 
Sbjct: 161  PS-WMGQRTPVDVNIAYVEGREEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQAN 219

Query: 485  GYIPQQDGAGDVLSEVLKVGPGSISKMPDQEGSLSC--------------RIPQLDGPIP 348
            G+IPQQDGAGD  + V ++     +    + G+++               +IPQLDGP+P
Sbjct: 220  GFIPQQDGAGDAANSVFEIEISGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMP 279

Query: 347  DPYDDSLSTPNIYNYQGVINEDYNIVNTPMPNEMQAPT---------------------X 231
            DPYDD LSTPNIYNYQGV NEDYNI NTP PN+  A T                      
Sbjct: 280  DPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNE 339

Query: 230  XXXXXXXXXXXXXXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGE 51
                                  LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKATGE
Sbjct: 340  DDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE 399

Query: 50   FDF 42
            FDF
Sbjct: 400  FDF 402


>gb|EXC10718.1| Transcription initiation factor IIA large subunit [Morus notabilis]
          Length = 404

 Score =  360 bits (925), Expect = 6e-97
 Identities = 209/403 (51%), Positives = 243/403 (60%), Gaps = 33/403 (8%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            +TSTS VY+ VIEDVI+KVRDEFIN+G PG+ VL ELQG+WE KMM AG +  PI+RS  
Sbjct: 2    ATSTSAVYVSVIEDVISKVRDEFINNG-PGEDVLKELQGMWEAKMMHAGVVNSPIERSGA 60

Query: 992  QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 816
             K   GGPITP  VHDLNV           TAD                     TPL   
Sbjct: 61   AKPTPGGPITP--VHDLNVPYEGTEEYETPTADML----------------FPPTPLQTP 102

Query: 815  AQTPLPGNDSSSFYNIPTGGT--PITPNEYSSTNENGGEG--QIKVGAGRPSQYMHPPSS 648
             QTPLPG  ++  YNIPTG T  P + NE  S    GG G     +  GRPS YM PPS 
Sbjct: 103  IQTPLPG--TADIYNIPTGPTDYPASGNETPSGGGGGGGGGGNTDMKGGRPSPYMQPPSP 160

Query: 647  WLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQ 468
            W+SQRPSLDVN+AYVEGR+E D+G ++   TQDFF+ PSGKRKRD++P  +Q+GG++PQQ
Sbjct: 161  WMSQRPSLDVNIAYVEGRDEVDRGTSHQPPTQDFFMPPSGKRKRDELPSQYQAGGFLPQQ 220

Query: 467  DGAGDVLSEVLKV---------GPGSISKMPDQEGSLSCRIPQLDGPIPDPYDDSLSTPN 315
            DGAGDV  EV ++         G    S++      +S +IPQLDGPIPDPYDD LSTPN
Sbjct: 221  DGAGDVAPEVFEIEVIGGSTSDGTRGNSEILASVLGVSSKIPQLDGPIPDPYDDVLSTPN 280

Query: 314  IYNYQGVINEDYNIVNTPMPNEMQA-------------------PTXXXXXXXXXXXXXX 192
            IYNYQGV NEDYNI NTP PN++ A                   P               
Sbjct: 281  IYNYQGVFNEDYNIANTPAPNDLPAGTPAIPAPNDVGEDDDDEPPLNENDDDELDDIDQG 340

Query: 191  XXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNK 63
                     LAQFDKVTRTKSRWKCTLKDGIM +NNKDILFNK
Sbjct: 341  EELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMRINNKDILFNK 383


>ref|XP_007205331.1| hypothetical protein PRUPE_ppa006992mg [Prunus persica]
            gi|462400973|gb|EMJ06530.1| hypothetical protein
            PRUPE_ppa006992mg [Prunus persica]
          Length = 386

 Score =  358 bits (919), Expect = 3e-96
 Identities = 201/405 (49%), Positives = 242/405 (59%), Gaps = 28/405 (6%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            +TSTS+VY+ VIEDVINKVR+EF+N G PG+ VL ELQG WE KMMQAG +  PI+R+  
Sbjct: 2    ATSTSSVYVSVIEDVINKVREEFMNSG-PGEDVLKELQGTWEAKMMQAGVVNTPIERAVA 60

Query: 992  QKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGTA 813
             K   G    TPVHDLNV           TA+                     TPL    
Sbjct: 61   SKPTPGSAI-TPVHDLNVPYEGTEEYETPTAEIL----------------FPPTPLQTPI 103

Query: 812  QTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSSWLSQR 633
            QTPLPG    + YNIPTGG+  + +   S + NGG    ++ AGRPS YM PPS W++ R
Sbjct: 104  QTPLPGT-GDNLYNIPTGGSDFSASANESGSSNGGSNT-ELKAGRPSPYMQPPSPWMNHR 161

Query: 632  PSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGAGD 453
            P LDVN+AYVEGR+E D+G ++   TQDFF M SGKRKR+D+   + +GG+IPQQDGAGD
Sbjct: 162  PPLDVNIAYVEGRDEVDRGTSHQPPTQDFFQMNSGKRKREDLASQYPAGGFIPQQDGAGD 221

Query: 452  VLSEVLKV---------GPGSISKMPDQEGSLSCRIPQLDGPIPDPYDDSLSTPNIYNYQ 300
               EV ++         G  + S+M       + +IPQLDGPIPDPYDD+LSTPNIYNYQ
Sbjct: 222  AAPEVFEIEVSGGSTSIGGRACSEMVTCALRSTPKIPQLDGPIPDPYDDALSTPNIYNYQ 281

Query: 299  GVINEDYNIVNTPMPNEM-------------------QAPTXXXXXXXXXXXXXXXXPLX 177
            G  NEDYN+ NTP PN++                   + P                    
Sbjct: 282  GTFNEDYNVANTPTPNDLPVSTPAPVVQNDVGDDDDDEPPLNENDDDDLDDVDQGEEVNT 341

Query: 176  XXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                LAQFDKVTRTKSRWKCTLKDGIM +NNKDILFNKATGEFDF
Sbjct: 342  HHLVLAQFDKVTRTKSRWKCTLKDGIMRINNKDILFNKATGEFDF 386


>ref|XP_007150517.1| hypothetical protein PHAVU_005G159000g [Phaseolus vulgaris]
            gi|561023781|gb|ESW22511.1| hypothetical protein
            PHAVU_005G159000g [Phaseolus vulgaris]
          Length = 385

 Score =  356 bits (913), Expect = 2e-95
 Identities = 210/412 (50%), Positives = 242/412 (58%), Gaps = 35/412 (8%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            +++TS VYI VIEDV+ KVRDEF+N+GGPG+ VL ELQ +WE KMMQAGA+LGPI+RS  
Sbjct: 3    ASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSTA 62

Query: 992  QKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGTA 813
             K   GPITP  VHDLN+                                   TPL    
Sbjct: 63   AKPTPGPITP--VHDLNMPYTEEYETPTAEML------------------FPPTPLQTPI 102

Query: 812  QTPLPGNDSSSFYNIPTGGTPITPNEY-SSTNENGGEGQIKVGAGRPSQYMHPPSSWLSQ 636
            QTPLPG   +S YNIPTG     P+EY SS N+ GG    K   GRP+ YM PPS W++ 
Sbjct: 103  QTPLPGTGDNSTYNIPTG-----PSEYPSSGNDTGGNADGK--GGRPATYMQPPSPWMNP 155

Query: 635  RPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGAG 456
            RPSLDVNVAYVEGR+E D+G +N   TQDFF M SGKRKR+D+P    +GGYIPQQDGAG
Sbjct: 156  RPSLDVNVAYVEGRDEADRGTSNQPLTQDFFTMSSGKRKRNDLPSHHNAGGYIPQQDGAG 215

Query: 455  DVLSEV--LKVGPGSIS----------KMPDQEGSLSCRIPQLDGPIPDPYDDSLSTPNI 312
            D    V  ++V  G IS          KM      L+ RIPQLDGPI  PYDD LSTPNI
Sbjct: 216  DAALGVFEIEVNGGDISINSHHTISKGKMQADLERLTTRIPQLDGPI--PYDDELSTPNI 273

Query: 311  YNYQGVINEDYNIVNTPMPNEM----------------------QAPTXXXXXXXXXXXX 198
            YNY  V ++DYNI NTP P E+                      + P             
Sbjct: 274  YNYGEVFSDDYNISNTPAPPEVPVSTPALLAQNEVGNDEDDDDDEPPLNEEDDDELDDME 333

Query: 197  XXXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                       LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKATGEF+F
Sbjct: 334  QGDDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFEF 385


>ref|XP_007150356.1| hypothetical protein PHAVU_005G146700g [Phaseolus vulgaris]
            gi|561023620|gb|ESW22350.1| hypothetical protein
            PHAVU_005G146700g [Phaseolus vulgaris]
          Length = 386

 Score =  353 bits (907), Expect = 8e-95
 Identities = 211/412 (51%), Positives = 245/412 (59%), Gaps = 35/412 (8%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            +++TS VYI VIEDV+ KVRDEF+N+GGPG+ VL ELQ +WE KMMQAGA+LGPI+RSA 
Sbjct: 3    ASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSAA 62

Query: 992  QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 816
             K   GGPITP  VHDLN+                                   TPL   
Sbjct: 63   AKPTPGGPITP--VHDLNMPYTEEYETPTAEML------------------FPPTPLQTP 102

Query: 815  AQTPLPGNDSSSFYNIPTGGTPITPNEY-SSTNENGGEGQIKVGAGRPSQYMHPPSSWLS 639
             QTPLPG   +S YNIPTG     P++Y SS N+NGG    K   GRP+ YM PPS W++
Sbjct: 103  IQTPLPGTGDNSTYNIPTG-----PSDYPSSGNDNGGNADGK--GGRPAPYMKPPSPWMN 155

Query: 638  QRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGA 459
             RP LDVNVAYVEGR+E D+G +N   TQDFF M SGKRKR+D+   + SGGYIPQQDGA
Sbjct: 156  PRPPLDVNVAYVEGRDEADRGTSNQPLTQDFFTMSSGKRKRNDLTSQYNSGGYIPQQDGA 215

Query: 458  GDVLSEV--LKVGPGSIS----------KMPDQEGSLSCRIPQLDGPIPDPYDDSLSTPN 315
            GD    V  ++V  G IS          K+P     L+ RIPQLDGPIP   DD+LSTPN
Sbjct: 216  GDAALGVFEIEVNGGDISINSHHTISKAKVPADLERLTSRIPQLDGPIPYE-DDALSTPN 274

Query: 314  IYNYQGVINEDYNIVNTPMPNEMQA---------------------PTXXXXXXXXXXXX 198
            IYNY  V +EDYNI NTP P E+ A                     P             
Sbjct: 275  IYNYGEVFSEDYNISNTPAPPEVPASTPALVAQNEVGNDDDDDDEPPLNEEDDDDLDDIE 334

Query: 197  XXXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                       LAQFDKV+RTKSRWKCTLKDGIMH+NNKDILFNKATGEF+F
Sbjct: 335  QGDDQNTHHLVLAQFDKVSRTKSRWKCTLKDGIMHINNKDILFNKATGEFEF 386


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoformX1 [Glycine max]
          Length = 391

 Score =  353 bits (907), Expect = 8e-95
 Identities = 215/415 (51%), Positives = 245/415 (59%), Gaps = 38/415 (9%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            +++TS VYI VIEDV+ KVRDEF+N+GGPG+ VL ELQ +WE KMMQAGA+LGPI+RS  
Sbjct: 3    ASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSTA 62

Query: 992  QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 816
             K   GGPITP  VHDLNV           TAD                     TPL   
Sbjct: 63   AKPTPGGPITP--VHDLNVPYEGTDEYETPTADML----------------FPPTPLQTP 104

Query: 815  AQTPLPGNDSSSFYNIPTGGTPITPNEY-SSTNENGGEGQIKVGAGRPSQYMHPPSSWLS 639
             QTPLPG   +S YNIPTG     P++Y SS N+ GG    K    RP+ YM  PS W++
Sbjct: 105  IQTPLPGTGDNSTYNIPTG-----PSDYPSSGNDTGGNADGK--GARPAPYMQSPSPWMN 157

Query: 638  QRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGA 459
            QRP LDVNVAYVEGR+E D+G +N   TQDFF MPSGKRKR+D+   + +GGYIPQQDGA
Sbjct: 158  QRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGYIPQQDGA 217

Query: 458  GDVLS---EVLKVGPG-------SISK---MPDQEGSLSCRIPQLDGPIPDPYDDSLSTP 318
            GD      E+   G G       +ISK     D E S S RIPQLDGPIP   DD LSTP
Sbjct: 218  GDATHGDFEIEVSGRGISINSHHTISKGKMSADLERSTS-RIPQLDGPIPYDDDDVLSTP 276

Query: 317  NIYNYQGVINEDYNIVNTPMPNEMQA-----------------------PTXXXXXXXXX 207
            NIYNY  V +EDYNI NTP P E+ A                       P          
Sbjct: 277  NIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDDDEPPLNEEDDDDLD 336

Query: 206  XXXXXXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                          LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKATGEF+F
Sbjct: 337  DMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFEF 391


>ref|XP_003537974.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoform X1 [Glycine max]
          Length = 392

 Score =  350 bits (897), Expect = 1e-93
 Identities = 214/418 (51%), Positives = 249/418 (59%), Gaps = 41/418 (9%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            +++TS VYI VI+DV+NKVRDEF+N+GGPGD VL ELQ +WE KMMQAGAI+GPI+RS  
Sbjct: 3    ASTTSQVYIQVIDDVMNKVRDEFVNNGGPGDEVLKELQSIWESKMMQAGAIVGPIERSGA 62

Query: 992  QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 816
             K   GGPI  TPVHDLN+           TA+                     TPL   
Sbjct: 63   PKPTPGGPI--TPVHDLNMPYEGTEEYETPTAEML----------------FPPTPLQTP 104

Query: 815  AQTPLPGNDSSSFYNIPTGGTPITPNEY-SSTNENGGEGQIKVGAGRPSQYMH-PPSSWL 642
             QTPLPG   +S YNIPTG     P++Y S+ NE G   +IK   GRP  YM  PPS W 
Sbjct: 105  LQTPLPGTVDNSMYNIPTG-----PSDYPSAGNEPGANNEIK--GGRPGPYMQPPPSPWT 157

Query: 641  ------SQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGY 480
                  +QR  LDVNVAYVEGR+E ++G +N   TQDFF M SGKRKRD++   + +GGY
Sbjct: 158  NQNQNQNQRAPLDVNVAYVEGRDEAERGASNQPLTQDFF-MSSGKRKRDEIASQYNAGGY 216

Query: 479  IPQQDGAGDVLSEVLKV---GPG---------SISKMPDQEGSLSCRIPQLDGPIPDPYD 336
            IPQQDGAGD  S++L++   G G         S  KMP Q    + +IPQLDGPIP   D
Sbjct: 217  IPQQDGAGDAASQILEIEVYGGGMSIDAGHSTSKGKMPAQSDRPASQIPQLDGPIPYD-D 275

Query: 335  DSLSTPNIYNYQGVINEDYNIVNTPMPNEMQA--------------------PTXXXXXX 216
            D LSTPNIYNY GV NEDYNI NTP P+E+ A                    P       
Sbjct: 276  DVLSTPNIYNY-GVFNEDYNIANTPAPSEVPASTPAPIAQNEVDEEDDDDEPPLNENDDD 334

Query: 215  XXXXXXXXXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                             LAQFDKVTRTKSRWKCTLKDGIMH+NNKDILFNKATGEFDF
Sbjct: 335  DLDDLDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 392


>ref|XP_003597404.1| Transcription factor/ transcription initiation factor [Medicago
            truncatula] gi|355486452|gb|AES67655.1| Transcription
            factor/ transcription initiation factor [Medicago
            truncatula] gi|388523053|gb|AFK49588.1| unknown [Medicago
            truncatula]
          Length = 388

 Score =  350 bits (897), Expect = 1e-93
 Identities = 211/413 (51%), Positives = 244/413 (59%), Gaps = 36/413 (8%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGG-PGDGVLAELQGLWELKMMQAGAILGPIDRSA 996
            +++TS VYI VIEDV+ KVRDEF+N G  PGD VL ELQ +WE K +QAGA+LGPI+R+ 
Sbjct: 3    ASTTSQVYIDVIEDVMVKVRDEFVNTGASPGDEVLRELQAIWESKCIQAGAVLGPIERNT 62

Query: 995  --KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLP 822
               +   GGPITP  VHDLNV           TA+                     TPL 
Sbjct: 63   GVNRPMPGGPITP--VHDLNVPYEGTEEYETPTAEIL----------------FPPTPLQ 104

Query: 821  GTAQTPLPGNDSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPPSSWL 642
               QTPLPG   +  YNIPTG     P++YSS N+ GG   +K G      +M PPS W+
Sbjct: 105  TPIQTPLPGPGETPNYNIPTG-----PSDYSSGNDAGGNADVKGGR---QAFMPPPSPWM 156

Query: 641  S--QRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQ 468
            +  QRP LDVNVAYVEGR+E D+G +N   TQDFF M  GKRKR+D+PPP+ +GGYIPQQ
Sbjct: 157  NMNQRPPLDVNVAYVEGRDEADRGASNQPMTQDFFTMTGGKRKRNDLPPPYDAGGYIPQQ 216

Query: 467  DGAGDVLSE--VLKVGPGSIS----------KMPDQEGSLSCRIPQLDGPIPDPYDDSLS 324
            DGAGD +S    ++V  GSIS          KMP     L+ RIPQLDGPIP   DD LS
Sbjct: 217  DGAGDAVSGDFEIEVCGGSISFNSQHTNSKGKMPADLERLASRIPQLDGPIPYE-DDVLS 275

Query: 323  TPNIYNYQGVINEDYNIVNTPMPNEMQA-------------------PTXXXXXXXXXXX 201
            TPNIYNY GV NEDYNI NTP P E+ A                   P            
Sbjct: 276  TPNIYNYGGVFNEDYNIANTPAPPEVPASTPALVAQNEAVNEDEDDEPLNEDDDDDLDDL 335

Query: 200  XXXXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFNKATGEFDF 42
                        LAQFDKVTRTKSRWKCTLKDGIMH+N KDILFNKATGEFDF
Sbjct: 336  DQEDDQDTNHLVLAQFDKVTRTKSRWKCTLKDGIMHINKKDILFNKATGEFDF 388


>ref|XP_006369541.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
            gi|550348133|gb|ERP66110.1| hypothetical protein
            POPTR_0001s25120g [Populus trichocarpa]
          Length = 455

 Score =  348 bits (892), Expect = 4e-93
 Identities = 215/421 (51%), Positives = 250/421 (59%), Gaps = 47/421 (11%)
 Frame = -2

Query: 1184 MASTSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPID 1005
            MAS++TST  VY  VIEDVI+KVRDEFIN+GGPG+ VL+ELQGLWE K+MQAG + GPI 
Sbjct: 1    MASSATST--VYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIV 58

Query: 1004 RSA--KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQT 831
            RS+  KQ   GG    TPVHDLNV           TA+                PG  QT
Sbjct: 59   RSSANKQLVPGGL---TPVHDLNVPYEGTEEYETPTAEILFPPTPLPGSAQTPLPGNVQT 115

Query: 830  PLPGTAQTPLPGN-DSSSFYNIPTGGTPITPNEYSSTNENGGEGQIKVGAGRPSQYMHPP 654
            PLPG   TPLPG+ D+SS YNI TG +   P   S     GG   +K  AGRPS +M  P
Sbjct: 116  PLPGNVPTPLPGSVDNSSMYNISTGSSSDYPTPVSDA---GGSTDVK--AGRPSHFMQSP 170

Query: 653  SSWLSQRPSLDVNV------------AYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDD 510
            S  + QRP LDVNV            AYVEGR+E D+GG++ T TQDFF M SGKRKR D
Sbjct: 171  SPLMHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQDFF-MSSGKRKRGD 229

Query: 509  VPPPFQSGGYIPQQDGAGDVLSEVLKVGPGS---------ISKMPDQEGSLS---CRIPQ 366
              P + +GG+IPQQDGA D  SEV +V  G+          +K  +    +S    +IPQ
Sbjct: 230  FAPKYNNGGFIPQQDGAVDSASEVSQVSQGNNPHGRCDTITTKNREILARVSRSYVKIPQ 289

Query: 365  LDGPIPDPYDDSLSTPNIYNYQGVINEDYNIVNTPMPNEMQAPTXXXXXXXXXXXXXXXX 186
            +DGPIPDPYDD LSTPNIYNYQGV NEDYNI NTP PN++QA T                
Sbjct: 290  VDGPIPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDE 349

Query: 185  PL--------------------XXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNKDILFN 66
            PL                         LAQFDKVTRTKSRWKCTLKDG+MH+NN+DILFN
Sbjct: 350  PLNEDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFN 409

Query: 65   K 63
            K
Sbjct: 410  K 410


>ref|XP_006595034.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoform X2 [Glycine max]
          Length = 409

 Score =  346 bits (887), Expect = 2e-92
 Identities = 211/433 (48%), Positives = 242/433 (55%), Gaps = 56/433 (12%)
 Frame = -2

Query: 1172 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 993
            +++TS VYI VIEDV+ KVRDEF+N+GGPG+ VL ELQ +WE KMMQAGA+LGPI+RS  
Sbjct: 3    ASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSTA 62

Query: 992  QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 816
             K   GGPITP  VHDLNV           TAD                     TPL   
Sbjct: 63   AKPTPGGPITP--VHDLNVPYEGTDEYETPTADML----------------FPPTPLQTP 104

Query: 815  AQTPLPGNDSSSFYNIPTGGTPITPNEY-SSTNENGGEGQIKVGAGRPSQYMHPPSSWLS 639
             QTPLPG   +S YNIPTG     P++Y SS N+ GG    K    RP+ YM  PS W++
Sbjct: 105  IQTPLPGTGDNSTYNIPTG-----PSDYPSSGNDTGGNADGK--GARPAPYMQSPSPWMN 157

Query: 638  QRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGA 459
            QRP LDVNVAYVEGR+E D+G +N   TQDFF MPSGKRKR+D+   + +GGYIPQQDGA
Sbjct: 158  QRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGYIPQQDGA 217

Query: 458  GDVLSEVLKVGPGSISK-------------------------------MPDQEGSLSCRI 372
            GD      ++    IS+                                 D E S S RI
Sbjct: 218  GDATHGDFEIEVPPISQHHIYHQDVCISFVSGRGISINSHHTISKGKMSADLERSTS-RI 276

Query: 371  PQLDGPIPDPYDDSLSTPNIYNYQGVINEDYNIVNTPMPNEMQA---------------- 240
            PQLDGPIP   DD LSTPNIYNY  V +EDYNI NTP P E+ A                
Sbjct: 277  PQLDGPIPYDDDDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFD 336

Query: 239  -------PTXXXXXXXXXXXXXXXXPLXXXXXLAQFDKVTRTKSRWKCTLKDGIMHVNNK 81
                   P                        LAQFDKVTRTKSRWKCTLKDGIMH+NNK
Sbjct: 337  DDDDDEPPLNEEDDDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNK 396

Query: 80   DILFNKATGEFDF 42
            DILFNKATGEF+F
Sbjct: 397  DILFNKATGEFEF 409