BLASTX nr result
ID: Mentha28_contig00001767
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00001767
(1816 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 877 0.0
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 812 0.0
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 743 0.0
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 694 0.0
dbj|BAA22288.1| polyprotein [Oryza australiensis] 669 0.0
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 645 0.0
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 645 0.0
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 645 0.0
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 635 e-179
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 617 e-174
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 561 e-157
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 560 e-156
emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera] 551 e-154
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 545 e-152
emb|CDF77009.1| hypothetical transposable element-related protei... 542 e-151
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera] 542 e-151
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera] 531 e-148
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 524 e-146
emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera] 520 e-145
emb|CAN74511.1| hypothetical protein VITISV_011891 [Vitis vinifera] 514 e-143
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 877 bits (2265), Expect = 0.0
Identities = 430/602 (71%), Positives = 504/602 (83%)
Frame = +3
Query: 6 KVIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKINPQPTNVVGEIANNITEPNQNIIIP 185
KV VSTNA FLE +YM +F+P SKVVLEELL D+I+P PT VV T + P
Sbjct: 55 KVFVSTNATFLEYNYMADFKPISKVVLEELLADEISPTPTTVVERQRKETTAQDLTPPPP 114
Query: 186 RRSERVIKPPIRYRQDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMNQEMESMYSN 365
RRS R I+ PIRYR++ EA VA++DG DDDP TF+ AM+D D+EKW EAM E+ESMYSN
Sbjct: 115 RRSGREIRLPIRYRENGEAQVAVTDGSDDDPLTFKMAMDDVDREKWQEAMKLEIESMYSN 174
Query: 366 SVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFSPVAM 545
SVW LVD PEG+KPIGCKWIYK KRG +GKVETFKARLVAKG++Q+EGVDYE+TFSPV M
Sbjct: 175 SVWKLVDLPEGIKPIGCKWIYKXKRGPNGKVETFKARLVAKGFTQKEGVDYEDTFSPVXM 234
Query: 546 LKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSI 725
LKSIRILLSI A DYEIWQMDVKT FLNG+++E IYM QPEGF K QEQKVCKL RSI
Sbjct: 235 LKSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYMVQPEGFVVKDQEQKVCKLQRSI 294
Query: 726 YGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGNDVEV 905
YGLKQASRSWN+ F+E IKSYGF+Q++ EPCVYK+I KV GNDVE
Sbjct: 295 YGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIGNDVES 354
Query: 906 LSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKG 1085
LS+VK WLA+QFQMKDLGEASYILGI++ RDRK RLLALSQA+YIDK+++++ M++SKKG
Sbjct: 355 LSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALSQAAYIDKVLVKFAMENSKKG 414
Query: 1086 YLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVTRFQS 1265
LP+RHG+ LSKEQCPKTPQ+EE M R+PYASAVGSLMYAM CTRPDIC+AVG+V+R+QS
Sbjct: 415 NLPSRHGVHLSKEQCPKTPQDEEKMRRVPYASAVGSLMYAMLCTRPDICFAVGVVSRYQS 474
Query: 1266 NPGIDHWVAVKNILKYLRRTRNYMLVYCGDKLQLDGYTDSDFQSDKDDRRSISGSVFTLC 1445
NPG+DHWVAVK+ILKYLRRTRNYMLVY G +L GYTDSDFQSD+D R+S S +VFTL
Sbjct: 475 NPGLDHWVAVKHILKYLRRTRNYMLVYSGRELIPIGYTDSDFQSDRDSRKSTSEAVFTLG 534
Query: 1446 GGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCDNS 1625
GGAI+WRS+KQT ADSTMEAEY+AACEA+KEAVWL+ FL +LE+VPNM PI LYCDNS
Sbjct: 535 GGAIIWRSVKQTCVADSTMEAEYVAACEAAKEAVWLREFLKELEVVPNMHEPIRLYCDNS 594
Query: 1626 GAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEK 1805
GAVAN+KEPR+H++ KHIERK+HL+R+IVSRGDVSV KIASA+N+ADPFTKTLP + FE+
Sbjct: 595 GAVANAKEPRNHRKGKHIERKFHLVREIVSRGDVSVEKIASANNIADPFTKTLPARSFEQ 654
Query: 1806 HL 1811
HL
Sbjct: 655 HL 656
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 812 bits (2097), Expect = 0.0
Identities = 412/581 (70%), Positives = 468/581 (80%), Gaps = 5/581 (0%)
Frame = +3
Query: 6 KVIVSTNAVFLENDYMDNFQPRSKVVLEELL---TDKINPQPTNVVGEIAN--NITEPNQ 170
KV VSTNA FLE D+ N QPRSK+VL+E+ TDK P + V + AN + + +Q
Sbjct: 712 KVFVSTNATFLEEDHXRNHQPRSKIVLKEMFKNATDK--PSSSTKVVDKANISDQSHTSQ 769
Query: 171 NIIIPRRSERVIKPPIRYRQDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMNQEME 350
+ +PRRS RV+ P RY E + I D +DP T++ AM D D+++W++AMN EME
Sbjct: 770 ELRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEME 829
Query: 351 SMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETF 530
SMY NSVW LVD P VKPIGCKWIYKRKR GKV+TFKARLVAKGY+Q+EGVDYEETF
Sbjct: 830 SMYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETF 889
Query: 531 SPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCK 710
SPVAMLKSIRILLSIA +YEIWQMDVKTAFLNG ++E IYM QPEGF A+ QEQKVCK
Sbjct: 890 SPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCK 949
Query: 711 LLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXG 890
L +SIYGLKQASRSWN+RFD IKSYGF+Q++DEPCVYKKI N V G
Sbjct: 950 LQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIG 1009
Query: 891 NDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQ 1070
NDVE L++VK WL TQFQMKDLGEA YILGI+IVR+RK + LA+SQASYIDK++ RY+MQ
Sbjct: 1010 NDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQ 1069
Query: 1071 DSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIV 1250
+SKKG LP RHGI LSKEQCPKTPQE E+M IPY+SAVGSLMYAM CTRPDICY+VGIV
Sbjct: 1070 NSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIV 1129
Query: 1251 TRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGDKLQLDGYTDSDFQSDKDDRRSISGS 1430
+R+QSNPG DHW AVKNILKYLRRTRNYMLVY L L GYTDSDFQSDKD R+S SGS
Sbjct: 1130 SRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGS 1189
Query: 1431 VFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITL 1610
VFTL GGA+VWRS+KQT ADSTMEAEY+AACEA+KEAVWL+ FLTDLE+VPNM PITL
Sbjct: 1190 VFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITL 1249
Query: 1611 YCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSV 1733
YCDNSGAVANSKEPRSHKR KHIERKYHLIR+IV RGDV V
Sbjct: 1250 YCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVHRGDVVV 1290
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 743 bits (1917), Expect = 0.0
Identities = 363/545 (66%), Positives = 439/545 (80%)
Frame = +3
Query: 177 IIPRRSERVIKPPIRYRQDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMNQEMESM 356
++ RRS R +PP+RY EA I + V+ +P + +A++D D +KWL AM EMESM
Sbjct: 77 VVLRRSGRTRRPPVRYTXLGEAFDRIPEEVNTEPVCYDDALQDKDADKWLVAMKSEMESM 136
Query: 357 YSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFSP 536
YSN VW LV+PP+GVKPIGCKWIYK+KRG+DGK +T+KA LVAKGY+Q+EG+DYEETFSP
Sbjct: 137 YSNQVWELVEPPKGVKPIGCKWIYKKKRGIDGKXZTYKAXLVAKGYTQKEGIDYEETFSP 196
Query: 537 VAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLL 716
VAMLKSIRILLSIAA DYEIWQMDVKTAFLNG +DE IYM+Q EGF GQE +CKL
Sbjct: 197 VAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQXEGFIXNGQEHLLCKLN 256
Query: 717 RSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGND 896
RSIYGLKQASRSWN FD+TIK++GFDQ DE CVYKK + KV GN
Sbjct: 257 RSIYGLKQASRSWNTCFDQTIKTFGFDQCHDESCVYKKWNGKKVVFLVLYVDDILLIGNC 316
Query: 897 VEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDS 1076
+ +L+ VK WL+ +F MKDLGEA++ILGI+++R+RKK+++ LSQA YID ++ R+ MQ S
Sbjct: 317 IGMLTSVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMIGLSQALYIDTILNRFNMQGS 376
Query: 1077 KKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVTR 1256
KKG+LP RHGI LSK+Q PKTP+E E+M +PYASAVGSLMYAM CTRPDIC+AVG+V+R
Sbjct: 377 KKGFLPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDICFAVGMVSR 436
Query: 1257 FQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGDKLQLDGYTDSDFQSDKDDRRSISGSVF 1436
FQSN G +HW AVK+I+KYL+RTR+YMLV+ + L GYTDSDFQSD+D R+S SG+VF
Sbjct: 437 FQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSENLXPIGYTDSDFQSDQDSRKSTSGNVF 496
Query: 1437 TLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYC 1616
L GGAI WRSIKQT ADSTMEAEY+AA EA+KEAVWL++FL DL +VP++ PITLYC
Sbjct: 497 XLGGGAISWRSIKQTXVADSTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQSPITLYC 556
Query: 1617 DNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKV 1796
DNSGAVANSKEPRSHKR+KHIERKYHLIRDIV RGD V+KIAS +NLADPFTK+L
Sbjct: 557 DNSGAVANSKEPRSHKRAKHIERKYHLIRDIVQRGDXVVMKIASENNLADPFTKSLSSXT 616
Query: 1797 FEKHL 1811
FE+H+
Sbjct: 617 FERHV 621
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 694 bits (1792), Expect = 0.0
Identities = 373/649 (57%), Positives = 457/649 (70%), Gaps = 46/649 (7%)
Frame = +3
Query: 3 KKVIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKI---------NPQPTNVVGEI---- 143
KK+IVSTNA +LE DY+ N P+S++ L EL D I P+P V +I
Sbjct: 651 KKIIVSTNAHYLEEDYIRNHIPKSQLALNELRGDTIPARIFPSEHEPEPFMVRADIPLPQ 710
Query: 144 --ANNITEPNQ---NIIIPRRSERVIKPPIRYRQDEEANVAIS----------------D 260
N++ P +I +P E ++ PI +E + +
Sbjct: 711 RSGRNVSGPEFETFDISLPVGDEENVEAPIHVPFEEHIDEVQDVVPPVINLPALQPQQDE 770
Query: 261 GVDDDPSTFRNA-----------MEDSDKEKWLEAMNQE-MESMYSNSVWILVDPPEGVK 404
GV + P R + + ++ E +N E MESMYSN VW LV+PP+GVK
Sbjct: 771 GVAEQPVVLRRSGRTRRPPVRYTLLGEAFDRIPEEVNTEPMESMYSNQVWELVEPPKGVK 830
Query: 405 PIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFSPVAMLKSIRILLSIAAC 584
PIGCKWIYK+KRG+DGKV+T+KA+LVAKGY+Q+EG+DYEETFSPVAMLKSIRILLSIAA
Sbjct: 831 PIGCKWIYKKKRGIDGKVQTYKAKLVAKGYTQKEGIDYEETFSPVAMLKSIRILLSIAAY 890
Query: 585 LDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLR 764
DYEIWQMDVKTAFLNG +DE IYM+Q EGF GQE +CKL RSIYGLKQASRSWN
Sbjct: 891 FDYEIWQMDVKTAFLNGSLDECIYMKQLEGFITNGQEHLLCKLNRSIYGLKQASRSWNTC 950
Query: 765 FDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQ 944
FD+TIK++GFDQ D CVYKK + KV + +F
Sbjct: 951 FDQTIKTFGFDQCHDVSCVYKKWNGKKV--------------------------VFLRFD 984
Query: 945 MKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKE 1124
MK LGEA++ILGI+++R+RKKR++ LSQA YID ++ R+ MQ SKKG+LP RHGIVLSK+
Sbjct: 985 MKYLGEAAHILGIKLMRNRKKRMIGLSQALYIDTILNRFNMQGSKKGFLPFRHGIVLSKD 1044
Query: 1125 QCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVTRFQSNPGIDHWVAVKNI 1304
Q PKTP+E E+M +PYASAVGSLMYAM CTRPDI +AVG+V+RFQSNPG +HW AVK+I
Sbjct: 1045 QSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDIYFAVGMVSRFQSNPGREHWTAVKHI 1104
Query: 1305 LKYLRRTRNYMLVYCGDKLQLDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTS 1484
+KYL+RTR+YMLV+ + L GYTDSDFQSD+D R+S SG+VF L GGAI WRSIKQT
Sbjct: 1105 IKYLKRTRDYMLVFQSENLVPIGYTDSDFQSDQDSRKSTSGNVFVLGGGAISWRSIKQTC 1164
Query: 1485 TADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCDNSGAVANSKEPRSHK 1664
AD TMEAEY+AA EA+KEAVWL++FL DL +VP++ PITLYCDNSGAVANSKEPRSHK
Sbjct: 1165 VADFTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQSPITLYCDNSGAVANSKEPRSHK 1224
Query: 1665 RSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHL 1811
R+KHI RKYHLIRDIV RGDV V+KIAS +NLADPFTK+L FE+H+
Sbjct: 1225 RAKHIXRKYHLIRDIVQRGDVVVMKIASENNLADPFTKSLSSTTFERHV 1273
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 669 bits (1725), Expect = 0.0
Identities = 333/602 (55%), Positives = 425/602 (70%), Gaps = 1/602 (0%)
Frame = +3
Query: 6 KVIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKINPQPTNVVGEIANNITEPNQNIIIP 185
KV V+ + VFLE +++ +V LEE+ T + ++ P + P
Sbjct: 707 KVFVARHGVFLEKEFLSRRVSGIRVHLEEVQETPETVSATTEPQQEDQSVAPPVVDTPAP 766
Query: 186 RRSERVIKPPIRYRQDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMNQEMESMYSN 365
RRSER + P RY E+ ++ + D +D+P T+ AM D KWL AM E+ESMY N
Sbjct: 767 RRSERSRRAPDRYTGAEQRDILLLD--NDEPKTYEEAMVGHDSNKWLGAMKSEIESMYDN 824
Query: 366 SVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFSPVAM 545
VW LVDPP+GVK I CKW++K+K +DG V +KARLVAKG+ Q +GVDY+ETFSPVAM
Sbjct: 825 QVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAM 884
Query: 546 LKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSI 725
LKSIRI+L+IAA DYEIWQMDVKTAFLNG + E +YM QP+GF K+CKL +SI
Sbjct: 885 LKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKSI 944
Query: 726 YGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGNDVEV 905
YGLKQASRSWN+RFDE IK +GF ++ +E CVYKK+S + GND+ +
Sbjct: 945 YGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPM 1004
Query: 906 LSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKG 1085
L VK L F MKDLGEA+YILGIRI RDR KRL+ LSQ++YIDK++ R+ M DSKKG
Sbjct: 1005 LESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKG 1064
Query: 1086 YLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVTRFQS 1265
+LP HGI LSK QCP+T E MG +PYASA+GS+MYAM CTRPD+ YA+ +R+QS
Sbjct: 1065 FLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQS 1124
Query: 1266 NPGIDHWVAVKNILKYLRRTRNYMLVYCGDK-LQLDGYTDSDFQSDKDDRRSISGSVFTL 1442
+PG HW AVKNILKYLRRT++ LVY G++ L + GYTD+ FQ+DKDD RS SG VF L
Sbjct: 1125 DPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASFQTDKDDYRSQSGFVFCL 1184
Query: 1443 CGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCDN 1622
GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+K F+++L ++ + P++LYCDN
Sbjct: 1185 NGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTGPMSLYCDN 1244
Query: 1623 SGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFE 1802
SGA+A +KEPRSH++SKHI R+YHLIR+IV RGDV + K+ + N+ADP TK LP E
Sbjct: 1245 SGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPLTKPLPQPKHE 1304
Query: 1803 KH 1808
H
Sbjct: 1305 AH 1306
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 645 bits (1664), Expect = 0.0
Identities = 322/603 (53%), Positives = 422/603 (69%), Gaps = 2/603 (0%)
Frame = +3
Query: 6 KVIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKINPQPTNVVGEI-ANNITEPNQNIII 182
KV V N FLE +++ SKV+LEE+ + + + ++ + EP
Sbjct: 351 KVFVVRNGAFLEREFLSKGTSGSKVLLEEVREPQGDVPTSQEEHQLDLRRVVEPILVEPE 410
Query: 183 PRRSERVIKPPIRYRQDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMNQEMESMYS 362
RRSER P R+R + A+ D+P+++ A+ D +KWLEA EMESM
Sbjct: 411 VRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESMSQ 470
Query: 363 NSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFSPVA 542
N VW LVD P+GVKPI CKWI+K+K +DG ++ +KA LVAKGY Q G+DY+ET+SPVA
Sbjct: 471 NKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSPVA 530
Query: 543 MLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRS 722
MLKSIRILL+ AA DYEIWQMDVKTAFLNG ++E +YM QPEGF +KVCKL RS
Sbjct: 531 MLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRS 590
Query: 723 IYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGNDVE 902
IYGLKQASRSWNLRF+E IK + F ++ +EPCVYKK S V GND+
Sbjct: 591 IYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIP 650
Query: 903 VLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKK 1082
+L VK WL + F MKD+GEA+YILGIRI RDR +++ LSQ +YIDK++ R+ M DSKK
Sbjct: 651 LLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKK 710
Query: 1083 GYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVTRFQ 1262
G++P HGI LSK QCP T E E M +IPYASA+GS+MYAM TRPD+ A+ + +R+Q
Sbjct: 711 GFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQ 770
Query: 1263 SNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDGYTDSDFQSDKDDRRSISGSVFT 1439
S+PG HW+ V+NI KYLRRT++ LVY G ++L + GYTD+ FQ+DKDD RS SG F
Sbjct: 771 SDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQSGFFFC 830
Query: 1440 LCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCD 1619
L GGA+ W+S KQ++ ADST EAEYIAA EA+KE VW++ F+T+L +VP++ PI LYCD
Sbjct: 831 LNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISGPIDLYCD 890
Query: 1620 NSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVF 1799
N+GA+A +KEP+SH++SKHI+R+YHLIR+I+ RGDV + ++++ N+AD FTK LP
Sbjct: 891 NNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPLPQPKH 950
Query: 1800 EKH 1808
E H
Sbjct: 951 ESH 953
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 645 bits (1664), Expect = 0.0
Identities = 330/604 (54%), Positives = 424/604 (70%), Gaps = 10/604 (1%)
Frame = +3
Query: 6 KVIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKINPQPT-------NVVGEIANNITEP 164
KV V+ + VFLE +++ S V L+E+ N + +VV ++ + EP
Sbjct: 647 KVFVARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVEQDVVQQVEQVVVEP 706
Query: 165 NQNIIIPRRSERVIKPPIRYR--QDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMN 338
RRSER+ + P RY + ++ + D +D+P+T+ AM D EKWL AM
Sbjct: 707 VVEAPASRRSERIRRTPARYALLTSGQRDILLLD--NDEPTTYEEAMVGPDTEKWLGAMK 764
Query: 339 QEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDY 518
E+ESM+ N VW LVDPP+GVK I CKWI+K+ VDG V + ARLVAKG+ Q +GVDY
Sbjct: 765 SEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDY 824
Query: 519 EETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQ 698
+ETFSPVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +YM QP+GF +
Sbjct: 825 DETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAK 884
Query: 699 KVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXX 878
K+CKL +SIY LKQASRSWN+RFDE +K+ GF ++ +EPCVYKKIS +
Sbjct: 885 KICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDI 944
Query: 879 XXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLR 1058
GND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+ LSQ++YIDK++ R
Sbjct: 945 LLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKR 1004
Query: 1059 YRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYA 1238
+ MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+MYAM CTR D+ YA
Sbjct: 1005 FNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYA 1064
Query: 1239 VGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDGYTDSDFQSDKDDRR 1415
+ +R+QS+ G HW+AVKNILKYLRRT++ LVY ++L ++GYTD+ FQ+DKDD R
Sbjct: 1065 LSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFR 1124
Query: 1416 SISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMD 1595
S SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+K F++ L ++ +
Sbjct: 1125 SQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSAS 1184
Query: 1596 RPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFT 1775
P+ LYCDNSGA+A +KEPRSH++SKHI R+YHLIR++V RGDV + KI + N+ADP T
Sbjct: 1185 SPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKICKIHTDLNVADPLT 1244
Query: 1776 KTLP 1787
K LP
Sbjct: 1245 KPLP 1248
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 645 bits (1664), Expect = 0.0
Identities = 330/604 (54%), Positives = 424/604 (70%), Gaps = 10/604 (1%)
Frame = +3
Query: 6 KVIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKINPQPT-------NVVGEIANNITEP 164
KV V+ + VFLE +++ S V L+E+ N + +VV ++ + EP
Sbjct: 560 KVFVARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVEQDVVQQVEQVVVEP 619
Query: 165 NQNIIIPRRSERVIKPPIRYR--QDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMN 338
RRSER+ + P RY + ++ + D +D+P+T+ AM D EKWL AM
Sbjct: 620 VVEAPASRRSERIRRTPARYALLTSGQRDILLLD--NDEPTTYEEAMVGPDTEKWLGAMK 677
Query: 339 QEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDY 518
E+ESM+ N VW LVDPP+GVK I CKWI+K+ VDG V + ARLVAKG+ Q +GVDY
Sbjct: 678 SEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDY 737
Query: 519 EETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQ 698
+ETFSPVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +YM QP+GF +
Sbjct: 738 DETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAK 797
Query: 699 KVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXX 878
K+CKL +SIY LKQASRSWN+RFDE +K+ GF ++ +EPCVYKKIS +
Sbjct: 798 KICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDI 857
Query: 879 XXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLR 1058
GND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+ LSQ++YIDK++ R
Sbjct: 858 LLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKR 917
Query: 1059 YRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYA 1238
+ MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+MYAM CTR D+ YA
Sbjct: 918 FNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYA 977
Query: 1239 VGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDGYTDSDFQSDKDDRR 1415
+ +R+QS+ G HW+AVKNILKYLRRT++ LVY ++L ++GYTD+ FQ+DKDD R
Sbjct: 978 LSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFR 1037
Query: 1416 SISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMD 1595
S SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+K F++ L ++ +
Sbjct: 1038 SQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSAS 1097
Query: 1596 RPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFT 1775
P+ LYCDNSGA+A +KEPRSH++SKHI R+YHLIR++V RGDV + KI + N+ADP T
Sbjct: 1098 SPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKICKIHTDLNVADPLT 1157
Query: 1776 KTLP 1787
K LP
Sbjct: 1158 KPLP 1161
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 635 bits (1637), Expect = e-179
Identities = 315/554 (56%), Positives = 402/554 (72%), Gaps = 1/554 (0%)
Frame = +3
Query: 150 NITEPNQNIIIPRRSERVIKPPIRYRQDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLE 329
NI EP PRRS+R + PIRY D + + + +D+P+T++ AM D D EKWL
Sbjct: 755 NIVEPVDEASAPRRSKRPCQMPIRYAHD----ILLLN--NDEPNTYKEAMMDPDSEKWLG 808
Query: 330 AMNQEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEG 509
AM E++SM N VW LVDP +GVK I CKWIYK+K +DG V KARLVAKG+ Q +G
Sbjct: 809 AMKSEIDSMRDNQVWNLVDPLDGVKTIECKWIYKKKIDMDGNVHIHKARLVAKGFRQVQG 868
Query: 510 VDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKG 689
VDY+ETFS VAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG + E +YM QPEGF
Sbjct: 869 VDYDETFSLVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVYMTQPEGFVDPN 928
Query: 690 QEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXX 869
KVCKL +SIYGLKQASRSWN+RFDE IK +GF ++ +EPCVY K+S +
Sbjct: 929 NASKVCKLQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYV 988
Query: 870 XXXXXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKM 1049
GND+ +L VK L F MKDLGEA+YILGI+I RDR +RL+ LSQ++YIDK+
Sbjct: 989 DDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKV 1048
Query: 1050 MLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDI 1229
++R+ MQ++KKG+LP HGI SK Q P T E + M IPYASA+GS+MYAM CTR D+
Sbjct: 1049 LIRFNMQNTKKGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDV 1108
Query: 1230 CYAVGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGD-KLQLDGYTDSDFQSDKD 1406
YA+ + +R+Q++PG HW AVKNILKYLRRT++ L+Y GD +L ++GYTD+ FQ+DKD
Sbjct: 1109 SYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVVNGYTDASFQTDKD 1168
Query: 1407 DRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVP 1586
D RS SG VF L GGA+ W+S KQ + ADST +AEYIAA EA+KE VW+++F+ +L +VP
Sbjct: 1169 DYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVP 1228
Query: 1587 NMDRPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLAD 1766
+ P+ LYCDN+GA+A +KEPRSH++SKHI R+YHLIR++V RGDV + KI + N+AD
Sbjct: 1229 SASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHTDLNVAD 1288
Query: 1767 PFTKTLPGKVFEKH 1808
P TK L E H
Sbjct: 1289 PLTKPLTQPKHEAH 1302
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 617 bits (1591), Expect = e-174
Identities = 323/603 (53%), Positives = 410/603 (67%), Gaps = 11/603 (1%)
Frame = +3
Query: 9 VIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKINPQPTNVVGEIANNITE-----PNQN 173
V V+ AVF E + + S + LEE+ + +GE +N E P
Sbjct: 683 VFVARRAVFRERELIFKEDSGSTIDLEEIQESSDDA----TLGETSNQHEEEVPVGPTDV 738
Query: 174 IIIPRRSERVIKPPIRY--RQDEEANVAISDGVD---DDPSTFRNAMEDSDKEKWLEAMN 338
+ RRS RV PP Y + + +SD D+P+ ++ A+ + KW EAM+
Sbjct: 739 SLPLRRSGRVSMPPEFYGFHITSDGDTFVSDRTLINLDEPANYQEAVAGPESAKWKEAMD 798
Query: 339 QEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDY 518
E++SMY N VW LVD G K +GCKWI+K+K +DGKV TFKARLVAKG++Q GVDY
Sbjct: 799 SEIKSMYDNQVWNLVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDY 858
Query: 519 EETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQ 698
+ETFSPVA +KSIRI+L+IAA DYEIWQMDVKTAFLNG + E +YM QPEGF
Sbjct: 859 DETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQPEGFVDAKYPN 918
Query: 699 KVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXX 878
KVCKL RSIYGLKQASRSWNL F E +K +GF +S DE CVY K S VT
Sbjct: 919 KVCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKASGSIVTFLVLYVDDI 978
Query: 879 XXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLR 1058
GND+ L +VK WL F MKDLGEA+YILGIRI+RDRKKRL+ LSQ +Y++K++ R
Sbjct: 979 LLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKR 1038
Query: 1059 YRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYA 1238
+ M++SKKG LP + LSK Q P T +E M R+PYASAVGS+MYAM CTRPD+ +A
Sbjct: 1039 FSMENSKKGELPIQSNAKLSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTRPDVAFA 1098
Query: 1239 VGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDGYTDSDFQSDKDDRR 1415
+ +V+R+Q NPG HW+AVKNILKYLRRT+N +LV G D L+++GYTD+ FQ+D+D R
Sbjct: 1099 LSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLGGSDTLRVEGYTDASFQTDRDSGR 1158
Query: 1416 SISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMD 1595
S SG VF L GGA+ W+S KQ + ADST E+EYIAA EASKEA WLK+F+ DL +VP++
Sbjct: 1159 SQSGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKEAAWLKNFIGDLGVVPSIQ 1218
Query: 1596 RPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFT 1775
P+ L+CDN GAVA +KEPR H +S+HI+RKYH IR V G + V +++S DN ADP T
Sbjct: 1219 EPLELFCDNEGAVALTKEPRDHGKSRHIDRKYHYIRHRVEEGHLLVKRVSSEDNPADPLT 1278
Query: 1776 KTL 1784
K L
Sbjct: 1279 KAL 1281
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 561 bits (1447), Expect = e-157
Identities = 301/612 (49%), Positives = 392/612 (64%), Gaps = 11/612 (1%)
Frame = +3
Query: 6 KVIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKINPQPT--------NVVGEIANNITE 161
KV V+ + VFLE +++ V LEE+ N + +VV ++ + E
Sbjct: 378 KVFVARHDVFLEKEFISTKDSGIMVRLEEIQETPKNASTSTQPQQDEQDVVQQVEQVVVE 437
Query: 162 PNQNIIIPRRSERVIKPPIRYR--QDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAM 335
P RRSER+ + P RY + ++ + D +D P+T+ AM D +KWL AM
Sbjct: 438 PVVEAPASRRSERIWRTPARYALLTTGQRDILLLD--NDKPTTYEEAMVGPDSKKWLGAM 495
Query: 336 NQEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVD 515
E+ESM+ N VW LVDPP+GVK I CKW++K+K +DG V +KARLVAKG+ Q + VD
Sbjct: 496 KSEIESMHVNQVWNLVDPPDGVKGIECKWVFKKKTDLDGNVHIYKARLVAKGFRQIQSVD 555
Query: 516 YEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQE 695
Y+ TFS V MLKSIRI+L+I A DYEIWQMDVKTAFLN +DE
Sbjct: 556 YDGTFSSVGMLKSIRIILAIPAYFDYEIWQMDVKTAFLNENLDED--------------- 600
Query: 696 QKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXX 875
+SIYGLKQASRSWN+RFDE +K+ GF ++ +EPCVYKKIS +
Sbjct: 601 -------KSIYGLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSAL--------- 644
Query: 876 XXXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMML 1055
DL EA+YIL IRI RDR +RL+ SQ++YIDK++
Sbjct: 645 -------------------------DLREAAYILSIRIYRDRSRRLIG-SQSTYIDKVLK 678
Query: 1056 RYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICY 1235
R+ MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+MYAM CTRPD+ Y
Sbjct: 679 RFNMQDSKKGFLPLSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVPY 738
Query: 1236 AVGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDGYTDSDFQSDKDDR 1412
A+ +++QS+PG HW+AVKNILKYLRRT++ L+Y G ++L ++ YTD+ FQ+DKDD
Sbjct: 739 ALSATSQYQSDPGESHWIAVKNILKYLRRTKDMFLIYGGQEELVVNNYTDASFQTDKDDF 798
Query: 1413 RSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNM 1592
RS SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEA W+K F++ L ++ +
Sbjct: 799 RSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAAWIKKFVSQLGVMTSA 858
Query: 1593 DRPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPF 1772
P+ LYCDNSGA+A +KEPRSH++SKHI R+YHLIR+IV RGDV + KI + N+ DP
Sbjct: 859 SSPMDLYCDNSGAIAQAKEPRSHRKSKHILRRYHLIREIVGRGDVKICKIHTDLNVVDPL 918
Query: 1773 TKTLPGKVFEKH 1808
TK LP E H
Sbjct: 919 TKPLPRPKHETH 930
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 560 bits (1442), Expect = e-156
Identities = 286/515 (55%), Positives = 364/515 (70%), Gaps = 1/515 (0%)
Frame = +3
Query: 267 DDDPSTFRNAMEDSDKEKWLEAMNQEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGV 446
+D+P+T+ AM L AM E+ESM+ N VW LVDPP+GVK I KW++K+K V
Sbjct: 546 NDEPTTYEEAMVG------LGAMKSEIESMHVNQVWNLVDPPDGVKAIEWKWVFKKKTDV 599
Query: 447 DGKVETFKARLVAKGYSQEEGVDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAF 626
DG V +KARLVAKG+ Q +GVDY+ETFS VAMLKSI+I+L+I A DYEIWQMDVKTAF
Sbjct: 600 DGNVHIYKARLVAKGFRQIQGVDYDETFSLVAMLKSIQIVLAITAYFDYEIWQMDVKTAF 659
Query: 627 LNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSI 806
+NG IDE +YM Q +GF +K+CKL +SIYGLKQASRSWN+RFDE +K++ ++
Sbjct: 660 VNGNIDEDVYMTQLKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKAWALSKTK 719
Query: 807 DEPCVYKKISNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIR 986
+Y GND+ +L VK L F MKDLGEA+YILGIR
Sbjct: 720 KSLVLY--------------VDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIR 765
Query: 987 IVRDRKKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGR 1166
I RDR KRL+ LSQ++YIDK++ R+ MQDSKKG+LP HGI L K QCP+T E M
Sbjct: 766 IYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSV 825
Query: 1167 IPYASAVGSLMYAMRCTRPDICYAVGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY 1346
IPYASA+GS+MYAM CT PD+ YA+ +R+QS+PG HW+AVKNILKYLRRT++ LVY
Sbjct: 826 IPYASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVY 885
Query: 1347 CG-DKLQLDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAA 1523
G ++L + GYTD+ FQ+DKDD RS SG VF L GGA+ W+S KQ + DS EAEYIAA
Sbjct: 886 GGQEELVVKGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAA 945
Query: 1524 CEASKEAVWLKSFLTDLEIVPNMDRPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIR 1703
EA+KEAVW+K F++ L ++ + P+ LYCDNSGA+A +KEPRSH++S +I +YHLIR
Sbjct: 946 SEAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKS-NILWRYHLIR 1004
Query: 1704 DIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKH 1808
+IV RG V + KI + N+ADP TK LP + H
Sbjct: 1005 EIVGRGVVKICKIHTDFNVADPLTKPLPQPKHQAH 1039
>emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]
Length = 1356
Score = 551 bits (1421), Expect = e-154
Identities = 289/613 (47%), Positives = 395/613 (64%), Gaps = 18/613 (2%)
Frame = +3
Query: 24 NAVFLEND----YMDNFQPRSKVVLEELLTDKINPQPTNVVGE--IANNITEPNQNIIIP 185
N VF E + DN Q ++ +E+ ++PQPT+ + + IAN P + P
Sbjct: 736 NIVFEEEEGSTIAFDNVQVSLPIIDQEV---NLDPQPTDNIVQPLIANEDIAPEEQTQQP 792
Query: 186 ------RRSERVIKPPIR-----YRQDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEA 332
RRS R + I Y Q+ E S ++DDP F+ AM+ S+ KW+EA
Sbjct: 793 QENMPLRRSTRERRNAISDDYIVYLQEREVE---SGMMEDDPINFQQAMKSSNSHKWIEA 849
Query: 333 MNQEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGV 512
MN+E +SM N VW LV P G KPIGCKWI+K KR +G VE +KARLVAKG++Q+EG+
Sbjct: 850 MNEEYKSMQDNKVWELVPLPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGI 909
Query: 513 DYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQ 692
D++ETFSPV+ S RI++++ A D E+ QMDVKTAFLNG IDE IYM QPE F ++
Sbjct: 910 DFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIYMVQPENFVSEDS 969
Query: 693 EQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXX 872
+ VCKL +SIYGLKQASR W +F + I SYGF+ ++ + CVY K S K
Sbjct: 970 KNMVCKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDECVYHKFSGSKYIFLVLYVD 1029
Query: 873 XXXXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMM 1052
ND+ +L + K +L+ F+MKDLG+AS++LGI+I RDR + +L LSQ +YIDK++
Sbjct: 1030 DILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVL 1089
Query: 1053 LRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDIC 1232
RY MQ+SK G P G S QCPK E + M +IPYASAVGSLMYA CTRPDI
Sbjct: 1090 QRYGMQNSKPGDTPVAKGDKFSLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIA 1149
Query: 1233 YAVGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDGYTDSDFQSDKDD 1409
Y VG++ R+ SNPG+DHW A K +++YL+RT+ YML Y D+L+L GY+DSDF +D
Sbjct: 1150 YIVGMLGRYLSNPGMDHWKAAKRVMRYLQRTKEYMLTYRRLDQLELIGYSDSDFAGCQDS 1209
Query: 1410 RRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPN 1589
RRS SG ++ L GGAI WRS KQT STMEAE++A EAS + +WL++F+T L ++
Sbjct: 1210 RRSTSGYIYLLAGGAISWRSAKQTLVTSSTMEAEFVACYEASNQGIWLRNFVTGLRVLDG 1269
Query: 1590 MDRPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADP 1769
++RP+ ++CDN AV S RS +SK+I+ K+ ++++ V G +S+ I + +ADP
Sbjct: 1270 IERPLKIFCDNKSAVLYSNNNRSSTKSKYIDIKFLVVKEKVQSGQISIEHIGTNSMIADP 1329
Query: 1770 FTKTLPGKVFEKH 1808
TK LP KVF +H
Sbjct: 1330 LTKGLPPKVFHEH 1342
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 545 bits (1403), Expect = e-152
Identities = 273/461 (59%), Positives = 337/461 (73%), Gaps = 1/461 (0%)
Frame = +3
Query: 429 KRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFSPVAMLKSIRILLSIAACLDYEIWQM 608
K+K VDG V +KARLVAKG+ Q +GVDY+ETFSPVAMLK I I+L+IAA DYEIWQM
Sbjct: 717 KKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKFIWIVLAIAAYFDYEIWQM 776
Query: 609 DVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSY 788
VKTAFLNG +DE +YM QP+GF +K+CKL +SIYGLKQASRSWN+RFDE +K+
Sbjct: 777 YVKTAFLNGNLDEDVYMTQPKGFDDPQSAKKICKLHQSIYGLKQASRSWNIRFDEVVKAL 836
Query: 789 GFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQMKDLGEAS 968
GF ++ +EPCVYKKIS + GND+ +L VK L F MKDLGEA+
Sbjct: 837 GFVRNEEEPCVYKKISGSALVFLILYVDDILLIGNDISMLESVKTSLKNSFSMKDLGEAA 896
Query: 969 YILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQE 1148
YILGIRI RDR KRL+ LSQ++YIDK++ R+ MQDSKKG+LP HGI L K QCP+T E
Sbjct: 897 YILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDE 956
Query: 1149 EENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVTRFQSNPGIDHWVAVKNILKYLRRTR 1328
M IPYASA+GS+MYAM CTRPD+ YA+ +R+QS+PG HW+AVKNILKYLRRT+
Sbjct: 957 RNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTK 1016
Query: 1329 NYMLVYCG-DKLQLDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTME 1505
+ L Y G ++L ++GYTD+ FQ DKDD RS SG VF L GGA+ W+S KQ DST E
Sbjct: 1017 DMFLAYGGQEELVVNGYTDASFQIDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVVDSTTE 1076
Query: 1506 AEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCDNSGAVANSKEPRSHKRSKHIER 1685
AEYIAA EAVW+K F++ L ++ + + LYCDNSGA+A +KEPRSH++SKHI R
Sbjct: 1077 AEYIAA----SEAVWIKKFVSQLGVMTSASSSMDLYCDNSGAIAQAKEPRSHQKSKHILR 1132
Query: 1686 KYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKH 1808
+YHLIR+IV RGDV + KI + N+ADP TK LP E H
Sbjct: 1133 QYHLIREIVGRGDVKICKIHTDLNVADPLTKPLPQPKHEAH 1173
>emb|CDF77009.1| hypothetical transposable element-related protein, partial [Boechera
divaricarpa]
Length = 1350
Score = 542 bits (1397), Expect = e-151
Identities = 282/622 (45%), Positives = 395/622 (63%), Gaps = 26/622 (4%)
Frame = +3
Query: 21 TNAVFLENDYMDNFQPRSKVVLEELLT----------DKINPQPTNVVGEIA--NNITEP 164
T F +N++ + R+ + EE ++ DK N +P N G + N+
Sbjct: 718 TATFFEDNEFRGRNKVRNIIFEEESVSAVNPIQIVVFDKANLEPQNDTGILPTQNDDDIG 777
Query: 165 NQNIIIPRRSERVIKPPIRYRQDEEANVAISDGV-------------DDDPSTFRNAMED 305
++ I P+ + + P+R E N D + DDP +FR AM
Sbjct: 778 HEEIQNPQELVQQEQVPLRRSTRERRNAIPDDYIVFLMEQEENQTQLKDDPVSFREAMGS 837
Query: 306 SDKEKWLEAMNQEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVA 485
S+ EKW++ M +E +SM N VW LV+ P+G KPIGCKWI+K KR G V+ +KARLVA
Sbjct: 838 SNSEKWIKGMEEEYQSMLDNKVWDLVELPKGQKPIGCKWIFKTKRDSSGNVQRYKARLVA 897
Query: 486 KGYSQEEGVDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQ 665
KGY+Q+EG+DY+ETFSPV+ +S R ++++ A D E+ QMDVKTAFLNG IDE IYM+Q
Sbjct: 898 KGYTQKEGIDYKETFSPVSSKESFRTIMALVAHYDLELHQMDVKTAFLNGDIDETIYMEQ 957
Query: 666 PEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGK 845
PE F + ++ VCKL +SIYGLKQASR W +F + I S+GF+ ++ E CVY+K S K
Sbjct: 958 PENFVSHDSKKMVCKLNKSIYGLKQASRQWYHKFHKVIISFGFEVNLVEDCVYQKFSGSK 1017
Query: 846 VTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALS 1025
+ ND+ +L E+K +L F+MKDLGEAS++LGI+I+RDR + +L LS
Sbjct: 1018 LIFLVLYVDDILLATNDINMLHEIKNFLKDNFEMKDLGEASFVLGIQIIRDRNQGILRLS 1077
Query: 1026 QASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYA 1205
Q +YIDK++ R+ M D K G P G QCPK E + M +IPYASAVGSLMYA
Sbjct: 1078 QKNYIDKVLKRFGMHDCKPGDTPVAKGDKFCLSQCPKENLEIQEMQKIPYASAVGSLMYA 1137
Query: 1206 MRCTRPDICYAVGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDGYTD 1382
CTRPDI Y VG++ R+ SNPG+DHW A K +++YL+RT++YML Y D L++ GY+D
Sbjct: 1138 QVCTRPDIAYIVGVLGRYLSNPGLDHWKAAKRVMRYLQRTKDYMLTYQRSDNLEIIGYSD 1197
Query: 1383 SDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSF 1562
SDF +D R+S SG VF L GGAI WRS KQ+ A STM AE++A EAS + +WLK+F
Sbjct: 1198 SDFAGCQDSRKSTSGYVFLLAGGAISWRSAKQSLVASSTMAAEFVAVFEASNQGLWLKNF 1257
Query: 1563 LTDLEIVPNMDRPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKI 1742
+T L+I+ ++RP+ +YCDN AV S + RS +SK I+ K+ ++++ + GD+S+ I
Sbjct: 1258 VTRLQILEGIERPLKIYCDNKSAVLYSNKNRSTTKSKFIDIKFLVVQERIQSGDISIEHI 1317
Query: 1743 ASADNLADPFTKTLPGKVFEKH 1808
+ +ADP TK +P KVF +H
Sbjct: 1318 GTNSMVADPLTKGIPPKVFHEH 1339
>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
Length = 1250
Score = 542 bits (1397), Expect = e-151
Identities = 290/648 (44%), Positives = 402/648 (62%), Gaps = 53/648 (8%)
Frame = +3
Query: 24 NAVFLEND----YMDNFQPRSKVVLEELLTDKINPQPT-NVVGEIANN--------ITEP 164
N VF E + +DN Q ++ +E+ ++PQPT N+V + N +P
Sbjct: 593 NIVFEEEEGSTIAIDNVQVSLPIIDQEV---NLDPQPTDNIVQPLIANEDIVPEEQTQQP 649
Query: 165 NQNIII-----PRRSERVIKP--------------------PIRYRQDEEANVAISDG-- 263
+N+ + RR+ +++P P+R R E AISD
Sbjct: 650 QENMPLRKSTRERRNXNIVQPLIANEDIXXEEQTQQPQENMPLR-RSTRERRNAISDDYI 708
Query: 264 ------------VDDDPSTFRNAMEDSDKEKWLEAMNQEMESMYSNSVWILVDPPEGVKP 407
++DDP F+ A + S+ KW+EAMN+E +SM N VW LV P G KP
Sbjct: 709 VYLQEREVESGMMEDDPINFQQAXKSSNSXKWIEAMNEEYKSMQDNKVWELVPLPVGTKP 768
Query: 408 IGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFSPVAMLKSIRILLSIAACL 587
IGCKWI+K KR +G VE +KARLVAKG++Q+EG+D++ETFSPV+ S RI++++ A
Sbjct: 769 IGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHY 828
Query: 588 DYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRF 767
D E+ QMDVKTAFLNG IDE IYM QPE F ++ + VCKL +SIYGLKQASR W +F
Sbjct: 829 DLELHQMDVKTAFLNGDIDETIYMVQPENFVSEDSKNMVCKLTKSIYGLKQASRQWYFKF 888
Query: 768 DETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQM 947
+ I SYGF+ ++ + CVY K S K ND+ +L + K +L+ F+M
Sbjct: 889 HQIIVSYGFEANLMDECVYHKFSGSKYIFLVLYVDDILLATNDIXILHDTKRFLSKHFEM 948
Query: 948 KDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQ 1127
KDLG+AS++LGI+I RDR + +L LSQ +YIDK++ RY MQ+SK G P G S Q
Sbjct: 949 KDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQ 1008
Query: 1128 CPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVTRFQSNPGIDHWVAVKNIL 1307
CPK E + M +IPYASAVGSLMYA CTRPDI Y VG++ R+ SNPG+DHW A K ++
Sbjct: 1009 CPKNXLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVM 1068
Query: 1308 KYLRRTRNYMLVYCG-DKLQLDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTS 1484
+YL+RT+ YML Y D+L+L GY+DSDF +D RRS SG ++ L GGAI WRS KQT
Sbjct: 1069 RYLQRTKEYMLTYRRLDQLELIGYSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTL 1128
Query: 1485 TADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCDNSGAVANSKEPRSHK 1664
STMEAE++A EAS + +WL++F+T L ++ ++RP+ ++CDN AV S RS
Sbjct: 1129 VTSSTMEAEFVACYEASNQGIWLRNFVTGLRVLDGIERPLKIFCDNKSAVLYSNNNRSST 1188
Query: 1665 RSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKH 1808
+SK+I+ K+ ++++ V G +S+ I + +ADP TK LP KVF +H
Sbjct: 1189 KSKYIDIKFLVVKEKVQSGQISIEHIGTNSMIADPLTKGLPPKVFHEH 1236
>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
Length = 1181
Score = 531 bits (1369), Expect = e-148
Identities = 276/607 (45%), Positives = 385/607 (63%), Gaps = 6/607 (0%)
Frame = +3
Query: 9 VIVSTNAVFLENDYMDNFQPRSKVVLEELLTDKINPQPTNVVGEIANNITEPNQNIIIPR 188
+I + + + ND + N Q + + + +P V E+ EP + + R
Sbjct: 567 IITTGHGHIMFNDTIQNVQSITGIQDTPEIPPXQVXEPIQVHQEVTQQPQEPXVQVPL-R 625
Query: 189 RSERVIKPPIR-----YRQDEEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMNQEMES 353
RS R + I Y Q+ E ++ G++DDP + + S+ EKW+EAM EM+S
Sbjct: 626 RSTRERRSTISDDYVVYLQEHEFDM----GLEDDPISVSQVKQSSNSEKWIEAMKDEMKS 681
Query: 354 MYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFS 533
M N VW LV+ P+GVKPIGCKWI+K KR G + +KARLVAKG++Q+EG+DY+ETFS
Sbjct: 682 MKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFS 741
Query: 534 PVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKL 713
PV+ S RI++++ A D E+ QMDVKTAFLNG IDE IYM QPE F +K +Q VC+L
Sbjct: 742 PVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESKDSKQLVCRL 801
Query: 714 LRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGN 893
RSIYGLKQASR W +FD+ I S+GF ++ + C+Y K S K +
Sbjct: 802 KRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLKFSGSKFIILVLYVDDILLASS 861
Query: 894 DVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQD 1073
DV +L E K +L+++F MKDLG AS++LGI+I RDR + +L LSQ +YIDK++ R+ M +
Sbjct: 862 DVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSN 921
Query: 1074 SKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVT 1253
G P G S QCPK E+++M R PYASAVGSLMYA CTRPDI Y VG++
Sbjct: 922 CAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLG 981
Query: 1254 RFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDGYTDSDFQSDKDDRRSISGS 1430
R+ SNPG+DHW K +++YL+RT++YML Y L++ GY+DSDF D RRS SG
Sbjct: 982 RYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSSHLEIVGYSDSDFAGCLDSRRSTSGY 1041
Query: 1431 VFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITL 1610
+F L GGA+ W+S+KQT A STMEAE+IA EAS +WL++F+T L IV +++P+ +
Sbjct: 1042 IFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLRNFVTQLXIVDGIEKPLRI 1101
Query: 1611 YCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPG 1790
CDN SK RS +SKHI+ K+ ++++ V VS+ I++ +ADP TK LP
Sbjct: 1102 NCDNKAXELYSKNNRSSSKSKHIDIKFLVVKERVQSLQVSIEHISTNSMIADPLTKGLPP 1161
Query: 1791 KVFEKHL 1811
KV+ +H+
Sbjct: 1162 KVYHEHV 1168
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 524 bits (1350), Expect = e-146
Identities = 286/647 (44%), Positives = 395/647 (61%), Gaps = 45/647 (6%)
Frame = +3
Query: 6 KVIVSTNAVFLEND----------------YMDNFQPRSKVVLEELLTDKIN-------- 113
+++ S NA F+END Y+++ S L + T ++
Sbjct: 670 RIVESRNAKFIENDLISGSDQLRDLGSEIDYIESQPSTSNERLVVIHTPQVQRDDEQHMI 729
Query: 114 --PQPT--NVVGEIANNITE----------PNQNIIIP-RRSERVIKPPIR-----YRQD 233
PQ N+V ++ + I E P +N+ RRS RV K I Y Q+
Sbjct: 730 GIPQTVVDNLVDQVDHQIHENDEQPVEQHDPQENVDATLRRSTRVRKSAIPSDYIVYLQE 789
Query: 234 EEANVAISDGVDDDPSTFRNAMEDSDKEKWLEAMNQEMESMYSNSVWILVDPPEGVKPIG 413
+ N+ G ++DP TF AM + W +AM EM SM SN VW LV+ P G K IG
Sbjct: 790 SDYNI----GAENDPETFDQAMSCKESNLWYDAMKDEMSSMQSNKVWNLVELPNGAKAIG 845
Query: 414 CKWIYKRKRGVDGKVETFKARLVAKGYSQEEGVDYEETFSPVAMLKSIRILLSIAACLDY 593
CKW++K K+ G +E +KARLVAKG++Q+EG+DY+ETFSPV+ S+RI+L++ A D
Sbjct: 846 CKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIILALVAHFDL 905
Query: 594 EIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDE 773
E+ QMDVKTAFLNG ++E +YM+QPEGF + E VCKL +SIYGLKQASR W L+F
Sbjct: 906 ELQQMDVKTAFLNGDLEEEVYMKQPEGFSSNSGEHLVCKLNKSIYGLKQASRQWYLKFHG 965
Query: 774 TIKSYGFDQSIDEPCVYKKISNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQMKD 953
I S+GFD++ + C+Y K+S K+ ND +L EVK +L+ F MKD
Sbjct: 966 IISSFGFDENPMDQCIYHKVSGSKICFLVLYVDDILLAANDRGLLHEVKQFLSKNFDMKD 1025
Query: 954 LGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCP 1133
+G+ASY++GI+I RDR + +L LSQ +YI+K++ R+RM+D P G + QCP
Sbjct: 1026 MGDASYVIGIKIHRDRSRGILGLSQETYINKILERFRMKDCSPSVAPIVKGDRFNLNQCP 1085
Query: 1134 KTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVTRFQSNPGIDHWVAVKNILKY 1313
K E E M IPYAS VGSLMYA CTRPDI +AVG++ R+QSNPGIDHW A K +L+Y
Sbjct: 1086 KNDFEREQMKNIPYASVVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWRAAKKVLRY 1145
Query: 1314 LRRTRNYMLVY-CGDKLQLDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTA 1490
L+ T++YML+Y D L GY+DSDF D RRS SG +F + GGAI W S+KQ+ A
Sbjct: 1146 LQGTKDYMLMYRQTDNLDAIGYSDSDFAGCVDSRRSTSGYIFMMAGGAISWGSVKQSLAA 1205
Query: 1491 DSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCDNSGAVANSKEPRSHKRS 1670
STMEAE+++ EA+ VWLKSF++ L+I+ + RP+ ++CDNS AV +K +S RS
Sbjct: 1206 TSTMEAEFVSCFEATSHGVWLKSFISGLKIIDTISRPLRIFCDNSAAVFMAKNNKSGSRS 1265
Query: 1671 KHIERKYHLIRDIVSRGDVSVLKIASADNLADPFTKTLPGKVFEKHL 1811
KHI+ KY IR+ V V + I++ +ADP TK +P F+ H+
Sbjct: 1266 KHIDIKYLAIRERVKDKKVVIEHISTELMIADPLTKGMPPFKFKDHV 1312
>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
Length = 2026
Score = 520 bits (1339), Expect = e-145
Identities = 269/628 (42%), Positives = 386/628 (61%), Gaps = 26/628 (4%)
Frame = +3
Query: 6 KVIVSTNAVFLENDYMDNFQPRSKVVLEELLTDK---------INPQPTNVVGEIANNIT 158
+++ + NA FLEN + K +EE+ D I PQP V +
Sbjct: 478 RIVETXNARFLENGEISGSNEPRKXDIEEIRVDIXPPFLPQEIIVPQPXQQVEXNEQHNR 537
Query: 159 E---PNQNIIIPRRSERVIKPPIRYRQDEEANVAISD-------------GVDDDPSTFR 290
+ P +NI I E P+R R E AI+D G+ DP +F
Sbjct: 538 DGSLPXENIPIENXVEPPQPXPLR-RSQRERRPAITDDYVVYLXESDFDIGIRKDPVSFS 596
Query: 291 NAMEDSDKEKWLEAMNQEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVETFK 470
AME D KW+EAMN+E++SM N VW L++ P KP+GCKW++K KR G +E FK
Sbjct: 597 QAMESDDSSKWMEAMNEELKSMAHNGVWDLIELPNNCKPVGCKWVFKTKRDAKGNIERFK 656
Query: 471 ARLVAKGYSQEEGVDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEP 650
ARLVAKG++Q+EG+DY++TFSPV+ S+RI++++ A D E+ QMDVKTAFLNG +DE
Sbjct: 657 ARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDED 716
Query: 651 IYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKK 830
IYM+Q EGF KG E VCKL +SIYGLKQASR W ++F+ TI +GF ++ + C+Y K
Sbjct: 717 IYMEQXEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITYFGFKENXVDQCIYLK 776
Query: 831 ISNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKR 1010
+S K +D+ +L E K +L+ F M D+GEA+Y++GI I RDR +
Sbjct: 777 VSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRG 836
Query: 1011 LLALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVG 1190
+L LSQ YID+++ R+ MQ G P G LSK QCP+ E E M +IPYAS VG
Sbjct: 837 VLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNXEREQMKKIPYASXVG 896
Query: 1191 SLMYAMRCTRPDICYAVGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQL 1367
SLMYA CTRPDI +AVG++ R+QS+PG +HW K +++YL+ T++YML Y ++L++
Sbjct: 897 SLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKXAKKVMRYLQGTKDYMLTYKRSEQLEV 956
Query: 1368 DGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAV 1547
GY++SD+ + +S SG VF L GAI W+S KQ+ TA STMEAE++A EAS +
Sbjct: 957 VGYSBSDYGGCLBSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHVL 1016
Query: 1548 WLKSFLTDLEIVPNMDRPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSRGDV 1727
WL++F++ L +V + +P+ +YCDN+ V SK + SKH++ KY ++++ V + +
Sbjct: 1017 WLQNFISGLGVVDPIAKPLRIYCDNTATVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQM 1076
Query: 1728 SVLKIASADNLADPFTKTLPGKVFEKHL 1811
S+ I + +ADP TK LP K + +H+
Sbjct: 1077 SIENIRTTLMVADPLTKGLPPKAYLEHV 1104
>emb|CAN74511.1| hypothetical protein VITISV_011891 [Vitis vinifera]
Length = 1283
Score = 514 bits (1323), Expect = e-143
Identities = 265/571 (46%), Positives = 364/571 (63%), Gaps = 6/571 (1%)
Frame = +3
Query: 117 QPTNVVGEIANNITEPNQNIIIPRRSERVIKPPIR-----YRQDEEANVAISDGVDDDPS 281
+P V E+ EP + + RRS R + I Y Q+ E ++ G++DDP
Sbjct: 705 EPIQVHQEVTQQPQEPQVQVPL-RRSTRERRSTISDDYVVYLQEHEFDM----GLEDDPI 759
Query: 282 TFRNAMEDSDKEKWLEAMNQEMESMYSNSVWILVDPPEGVKPIGCKWIYKRKRGVDGKVE 461
+ + D EKW+EAM EM+SM N VW L + P+GVK IGCKWI+K KR G +
Sbjct: 760 SVSQVKQSFDSEKWIEAMKDEMKSMKDNGVWDLEELPKGVKSIGCKWIFKTKRDSKGNIV 819
Query: 462 TFKARLVAKGYSQEEGVDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYI 641
+KARLVAKG++Q+EG+DY+ETFSPV+ S RI++++ A D E+ QMDVKTAFLNG I
Sbjct: 820 KYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNI 879
Query: 642 DEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCV 821
DE IYM QPE F + +Q VC+L RSIYGLKQASR W +FD+ I S+GF ++ + C+
Sbjct: 880 DETIYMVQPENFESXDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCI 939
Query: 822 YKKISNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDR 1001
Y K S K +DV +L E K +L+++F MKDLG AS++LGI+I RDR
Sbjct: 940 YLKFSGSKFIILVLYVDDILLASSDVXLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDR 999
Query: 1002 KKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYAS 1181
+ +L LSQ +YIDK++ R+ M + G P S QCPK E+++M R PYAS
Sbjct: 1000 SRGILGLSQKAYIDKVLSRFGMSNCAPGDTPVAKXDKFSLHQCPKNELEKKDMERFPYAS 1059
Query: 1182 AVGSLMYAMRCTRPDICYAVGIVTRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDK 1358
AVGSLMYA CTRPDI Y VG++ R+ SNPG+DHW K +++YL+RT++YML Y
Sbjct: 1060 AVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRIXSH 1119
Query: 1359 LQLDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASK 1538
L++ GY DSDF D RRS S +F L GGA+ W+S+KQT STMEAE+IA EAS
Sbjct: 1120 LEIVGYXDSDFAGCLDSRRSTSXYIFMLAGGAVSWKSVKQTLIXSSTMEAEFIACYEASN 1179
Query: 1539 EAVWLKSFLTDLEIVPNMDRPITLYCDNSGAVANSKEPRSHKRSKHIERKYHLIRDIVSR 1718
+WL++F+T L IV +++P+ + CDN A SK RS +SKHI+ K+ ++++ V
Sbjct: 1180 HGIWLRNFVTQLRIVDXIEKPLXINCDNKAAELYSKNNRSSSKSKHIDIKFLVVKEKVQS 1239
Query: 1719 GDVSVLKIASADNLADPFTKTLPGKVFEKHL 1811
VS+ I++ +AD TK LP KV+ +H+
Sbjct: 1240 LQVSIEHISTNSMIADXLTKGLPPKVYHEHV 1270