BLASTX nr result

ID: Mentha28_contig00001699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00001699
         (423 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234598.1| TCP transcription factor 22 [Solanum lycoper...    74   2e-11

>ref|NP_001234598.1| TCP transcription factor 22 [Solanum lycopersicum]
           gi|306416859|gb|ADM87273.1| TCP transcription factor 22
           [Solanum lycopersicum]
          Length = 371

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 49/126 (38%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
 Frame = -2

Query: 362 MFPYGENP-----LEPTFKKQSFQLYDQIQNPTISKTDELPFFCNFPSPFFDEHELPLNQ 198
           MFP   N         TF ++SF  YD     + S+ ++ PFF NFPSPF D +E PL+Q
Sbjct: 1   MFPSSNNHDTFSYTSKTFLERSFT-YDHQNPSSSSRQEDNPFFLNFPSPFLDHNESPLSQ 59

Query: 197 IFPT-FTASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRTGKKDRHSKICTAQG 21
           I P                                       R+RTGKKDRHSKICTAQG
Sbjct: 60  ILPQDHHVKEGNFTHLSSETSKEEMSIEAKPSSKKRSLSTTPRRRTGKKDRHSKICTAQG 119

Query: 20  VRDRRM 3
           VRDRR+
Sbjct: 120 VRDRRV 125


Top