BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00050245
         (373 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99961.1| retrotransposon protein, putative, unclassified [...    56   6e-06

>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1619

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/115 (26%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
 Frame = -3

Query: 341 KWVIQGFEFQYSPRLLKNEGCDMILGGDWFRFCTPIELDYTNMSVTV*LNGERVTFHALT 162
           +W +QG +FQ + R+L     DMILG DW    +P+ +D++  ++T+ L G  VT   + 
Sbjct: 532 EWQVQGHKFQTTLRVLPITSYDMILGMDWLMKHSPMSVDWSLKTITLSLQGTTVTLQGVH 591

Query: 161 NSV-DCTLVTGAVLSSLIHQE-ISTIEEIFLLNEPTQIHTSPVELEPLLQEFSDV 3
           + +  C +++   +     ++ ++ + ++  + +  +  T PV ++ L+QEF+ V
Sbjct: 592 SELAHCKILSANEMQQFQQRKAVAHMVQLCSITDDVEPETIPVPVQELMQEFTTV 646