BLASTX nr result
ID: Mentha27_contig00049830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00049830
(373 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 77 9e-23
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera] 77 8e-22
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group] 67 6e-21
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 69 8e-21
ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777... 66 1e-20
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ... 79 2e-20
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 67 2e-20
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 65 2e-20
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ... 69 4e-20
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 74 5e-20
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 64 5e-20
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 64 5e-20
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 64 1e-19
emb|CAH66819.1| OSIGBa0093K19.6 [Oryza sativa Indica Group] 63 1e-19
emb|CAE04381.1| OSJNBa0027G07.23 [Oryza sativa Japonica Group] g... 63 1e-19
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695... 72 2e-19
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 61 2e-19
gb|AAW56918.1| putative polyprotein [Oryza sativa Japonica Group] 65 2e-19
gb|AAB82754.1| retrofit [Oryza longistaminata] 64 3e-19
emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera] 67 4e-19
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 77.4 bits (189), Expect(2) = 9e-23
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P AL+ P W +AM+ EFQ L +N TWDLV ++ +KV+ NK IFK+K H D ++ +
Sbjct: 324 PTSVSAALSDPKWFKAMQEEFQALQNNHTWDLVLPSEPIKVVGNKWIFKIKYHADGTISR 383
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF GVD
Sbjct: 384 YKARLVAKGFHQTQGVD 400
Score = 55.1 bits (131), Expect(2) = 9e-23
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R + +NN FLNG+L + +YM QP F D P +VCK K++LYGLKQ
Sbjct: 429 RQVDVNNAFLNGILVEDVYMGQPEGFIDPSRPLHVCKLKKALYGLKQ 475
>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
Length = 731
Score = 77.0 bits (188), Expect(2) = 8e-22
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P C L P W AM+ E++ L+ N TWDLVPY V+ NK +FK+K H+DD+L+K
Sbjct: 277 PMCVKQVLADPNWKIAMKEEYKALMRNDTWDLVPYQPQYNVVGNKWVFKLKFHLDDTLNK 336
Query: 189 LKVRLVAWGFE*FDGVD 139
K LVA GF GVD
Sbjct: 337 HKASLVAKGFHQTPGVD 353
Score = 52.4 bits (124), Expect(2) = 8e-22
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L INN FLNG L++ ++M++P F P+++CK +++LYGLKQ
Sbjct: 382 RQLDINNAFLNGYLQENVFMSEPKDFIHPTKPHHICKLRKALYGLKQ 428
>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
Length = 950
Score = 67.0 bits (162), Expect(2) = 6e-21
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ AL WI AM+AE+ L+ N TW LVPY +I K ++K+K D +LD+
Sbjct: 5 PQNNREALGDKNWIAAMQAEYDALIKNNTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDR 64
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF+ G+D
Sbjct: 65 YKARLVAKGFKQRYGID 81
Score = 59.3 bits (142), Expect(2) = 6e-21
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + NVFL+G L++++YM QP FE + PNYVCK ++LYGLKQ
Sbjct: 110 RQLDVQNVFLHGFLQEEVYMQQPPGFESSSKPNYVCKLDKALYGLKQ 156
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 68.6 bits (166), Expect(2) = 8e-21
Identities = 37/77 (48%), Positives = 44/77 (57%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P AL P W AM AEFQ L N TW LVP +I K +FKVK + D S+D+
Sbjct: 925 PSSVSEALADPQWRAAMEAEFQALQKNNTWTLVPPDRTRNLIDCKWVFKVKYNADGSIDR 984
Query: 189 LKVRLVAWGFE*FDGVD 139
LK RLVA GF+ G+D
Sbjct: 985 LKARLVAKGFKQQYGID 1001
Score = 57.4 bits (137), Expect(2) = 8e-21
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+G+LE+ +YM QP F D +PNY C ++SLYGLKQ
Sbjct: 1030 RQLDVQNAFLHGILEETVYMKQPPGFADTTHPNYHCHLQKSLYGLKQ 1076
>ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777694 [Setaria italica]
Length = 1416
Score = 65.9 bits (159), Expect(2) = 1e-20
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 351 ALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDKLKVRLV 172
AL P W +AM EF L+ N TWDLVP +++ K IFK K H D SL++ K R V
Sbjct: 906 ALADPNWRQAMHEEFDALLSNNTWDLVPRPSGSNIVTGKWIFKHKFHADGSLERYKARWV 965
Query: 171 AWGFE*FDGVD 139
GF GVD
Sbjct: 966 LRGFTQRPGVD 976
Score = 59.7 bits (143), Expect(2) = 1e-20
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = -1
Query: 136 LYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
L + N FL+G L + +Y QPT FED+ +P YVCK RSLYGLKQ
Sbjct: 1007 LDVKNAFLHGTLSETVYCAQPTGFEDSAHPGYVCKLNRSLYGLKQ 1051
>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268350|emb|CAB78643.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 1942
Score = 79.3 bits (194), Expect(2) = 2e-20
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ AL P W AM E+ + QTW LVPYT DM V+ +K +F+ K + D SLDK
Sbjct: 808 PKTVTEALKHPGWTAAMHEEYDNCTEAQTWSLVPYTSDMNVLGSKWVFRTKLNADGSLDK 867
Query: 189 LKVRLVAWGFE*FDGVD 139
LK RLVA GF+ +G+D
Sbjct: 868 LKARLVAKGFDQEEGID 884
Score = 79.3 bits (194), Expect(2) = 2e-20
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ AL P W AM E+ + QTW LVPYT DM V+ +K +F+ K + D SLDK
Sbjct: 1708 PKTVTEALKHPGWTAAMHEEYDNCTEAQTWSLVPYTSDMNVLGSKWVFRTKLNADGSLDK 1767
Query: 189 LKVRLVAWGFE*FDGVD 139
LK RLVA GF+ +G+D
Sbjct: 1768 LKARLVAKGFDQEEGID 1784
Score = 45.1 bits (105), Expect(2) = 2e-20
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = -1
Query: 130 INNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
+ N FL+G L + +YM QP F + + P +VC ++LYGLKQ
Sbjct: 917 VKNAFLHGDLTETVYMLQPAGFVNKEKPTHVCHLHKALYGLKQ 959
Score = 45.1 bits (105), Expect(2) = 2e-20
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = -1
Query: 130 INNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
+ N FL+G L + +YM QP F + + P +VC ++LYGLKQ
Sbjct: 1817 VKNAFLHGDLTETVYMLQPAGFVNKEKPTHVCHLHKALYGLKQ 1859
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 67.0 bits (162), Expect(2) = 2e-20
Identities = 35/77 (45%), Positives = 45/77 (58%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P AL W AM AEF L+DN+TW LVP + D +I K ++K+K D SLD+
Sbjct: 527 PNNLAEALADNNWKHAMDAEFTALLDNKTWHLVPPSSDKNIIDCKWVYKIKRKSDGSLDR 586
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF+ G+D
Sbjct: 587 YKARLVAKGFKQRYGID 603
Score = 57.4 bits (137), Expect(2) = 2e-20
Identities = 24/47 (51%), Positives = 35/47 (74%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+G LE+++YM QP+ +ED P+YVCK +++YGLKQ
Sbjct: 632 RQLDVQNAFLHGYLEEEVYMRQPSGYEDKSKPSYVCKLDKAIYGLKQ 678
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 65.5 bits (158), Expect(2) = 2e-20
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ A+ + W EAM AE+ L++N+TW LVP VI K ++KVK D SLD+
Sbjct: 307 PQSLEEAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDR 366
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF+ G+D
Sbjct: 367 YKARLVAKGFKQRYGID 383
Score = 58.9 bits (141), Expect(2) = 2e-20
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+GVLE+++YM QP +E PNYVCK ++LYGLKQ
Sbjct: 412 RQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQ 458
>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
gi|241947225|gb|EES20370.1| hypothetical protein
SORBIDRAFT_0019s003280 [Sorghum bicolor]
Length = 761
Score = 68.9 bits (167), Expect(2) = 4e-20
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = -2
Query: 351 ALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDKLKVRLV 172
ALT P W +AM E+ L+DN TWDLVP + V++ K IFK K H D +LD+ K R V
Sbjct: 253 ALTDPHWRQAMEEEYAALMDNHTWDLVPRPNAANVVTGKWIFKHKFHADGTLDRYKARWV 312
Query: 171 AWGFE*FDGVD 139
GF G+D
Sbjct: 313 LRGFTQRPGID 323
Score = 54.7 bits (130), Expect(2) = 4e-20
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = -1
Query: 136 LYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
L + N FL+G L + +Y +QPT F D+ +P +VCK +SLYGLKQ
Sbjct: 354 LDVKNAFLHGTLSETVYCSQPTGFADSTHPTHVCKLNKSLYGLKQ 398
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 74.3 bits (181), Expect(2) = 5e-20
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ A+ P W EA+ E + TW LVP TDDM ++S+K +FK K H D S+DK
Sbjct: 860 PKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSIDK 919
Query: 189 LKVRLVAWGFE*FDGVD 139
LK RLVA GF+ +GVD
Sbjct: 920 LKARLVAKGFDQEEGVD 936
Score = 48.9 bits (115), Expect(2) = 5e-20
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = -1
Query: 136 LYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
L ++N FL+G L++ ++M QP+ F D Q P +VC+ +++YGLKQ
Sbjct: 967 LDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQ 1011
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 64.3 bits (155), Expect(2) = 5e-20
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = -2
Query: 351 ALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDKLKVRLV 172
A+ + W EAM AE+ L++N+TW LVP VI K ++KVK D SLD+ K RLV
Sbjct: 891 AVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLV 950
Query: 171 AWGFE*FDGVD 139
A GF+ G+D
Sbjct: 951 AKGFKQRYGID 961
Score = 58.9 bits (141), Expect(2) = 5e-20
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+GVLE+++YM QP +E PNYVCK ++LYGLKQ
Sbjct: 990 RQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKLDKALYGLKQ 1036
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 64.3 bits (155), Expect(2) = 5e-20
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = -2
Query: 351 ALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDKLKVRLV 172
A+ + W EAM AE+ L++N+TW LVP VI K ++KVK D SLD+ K RLV
Sbjct: 837 AVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLV 896
Query: 171 AWGFE*FDGVD 139
A GF+ G+D
Sbjct: 897 AKGFKQRYGID 907
Score = 58.9 bits (141), Expect(2) = 5e-20
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+GVLE+++YM QP +E PNYVCK ++LYGLKQ
Sbjct: 936 RQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKLDKALYGLKQ 982
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 64.3 bits (155), Expect(2) = 1e-19
Identities = 33/77 (42%), Positives = 43/77 (55%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ AL W AM AE+ L+ N TW LVPY VI K ++K+K D +LD+
Sbjct: 928 PQNDKEALGDKNWKAAMEAEYDALIKNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDR 987
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF+ G+D
Sbjct: 988 YKARLVAKGFKQRYGID 1004
Score = 57.8 bits (138), Expect(2) = 1e-19
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+G LE+++YM QP FE PNYVCK ++LYGLKQ
Sbjct: 1033 RQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQ 1079
>emb|CAH66819.1| OSIGBa0093K19.6 [Oryza sativa Indica Group]
Length = 472
Score = 63.2 bits (152), Expect(2) = 1e-19
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ A + W EAM AE+Q L+ NQTW LVP +I K ++KVK SLD+
Sbjct: 126 PQSLDEAFATNHWREAMDAEYQALMKNQTWHLVPLQQGRNIIDCKWVYKVKRKAYGSLDR 185
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF+ G+D
Sbjct: 186 YKARLVAKGFKQRYGID 202
Score = 58.5 bits (140), Expect(2) = 1e-19
Identities = 22/47 (46%), Positives = 39/47 (82%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+G+LE++++M QP+ +E++++PN++CK ++LYGLKQ
Sbjct: 231 RQLDVQNAFLHGILEEEVHMKQPSGYENSKFPNHICKLDKALYGLKQ 277
>emb|CAE04381.1| OSJNBa0027G07.23 [Oryza sativa Japonica Group]
gi|38347090|emb|CAE02562.2| OSJNBa0006M15.5 [Oryza
sativa Japonica Group]
Length = 472
Score = 63.2 bits (152), Expect(2) = 1e-19
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ A + W EAM AE+Q L+ NQTW LVP +I K ++KVK SLD+
Sbjct: 126 PQSLDEAFATNHWREAMDAEYQALMKNQTWHLVPLQQGRNIIDCKWVYKVKRKAYGSLDR 185
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF+ G+D
Sbjct: 186 YKARLVAKGFKQRYGID 202
Score = 58.5 bits (140), Expect(2) = 1e-19
Identities = 22/47 (46%), Positives = 39/47 (82%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+G+LE++++M QP+ +E++++PN++CK ++LYGLKQ
Sbjct: 231 RQLDVQNAFLHGILEEEVHMKQPSGYENSKFPNHICKLDKALYGLKQ 277
>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
putative protein [Arabidopsis thaliana]
Length = 1318
Score = 71.6 bits (174), Expect(2) = 2e-19
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ AL P W AM E + QTW LVPY DM V+ +K +F+ K H D +L+K
Sbjct: 714 PKTVTAALKHPGWTGAMTEEIGNCSETQTWSLVPYKSDMHVLGSKWVFRTKLHADGTLNK 773
Query: 189 LKVRLVAWGFE*FDGVD 139
LK R+VA GF +G+D
Sbjct: 774 LKARIVAKGFLQEEGID 790
Score = 49.7 bits (117), Expect(2) = 2e-19
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = -1
Query: 130 INNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
+ N FL+G L++ +YMTQP F D P++VC +S+YGLKQ
Sbjct: 823 VKNAFLHGDLKETVYMTQPAGFVDPSKPDHVCLLHKSIYGLKQ 865
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 61.2 bits (147), Expect(2) = 2e-19
Identities = 35/77 (45%), Positives = 44/77 (57%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
PE AL W +AM AEF L +N+TW LVP VI K ++K+K D SLD+
Sbjct: 739 PENLDDALKDNNWKKAMDAEFMALQNNKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDR 798
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF+ G+D
Sbjct: 799 YKARLVAKGFKQRYGID 815
Score = 60.1 bits (144), Expect(2) = 2e-19
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+GVLE+++YM QP +ED+ P YVCK ++LYGLKQ
Sbjct: 844 RQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGYVCKLDKALYGLKQ 890
>gb|AAW56918.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1018
Score = 65.1 bits (157), Expect(2) = 2e-19
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = -2
Query: 351 ALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDKLKVRLV 172
A + W EAM AE+Q L+ NQTW LVP +I K ++KVK D SLD+ K RLV
Sbjct: 564 AFATNHWREAMDAEYQALMKNQTWHLVPPQQGRNIIDCKWVYKVKRKADGSLDRYKARLV 623
Query: 171 AWGFE*FDGVD 139
A GF+ G+D
Sbjct: 624 AKGFKQRYGID 634
Score = 55.8 bits (133), Expect(2) = 2e-19
Identities = 21/47 (44%), Positives = 37/47 (78%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+G+LE+++YM Q +E++++PN++CK +++YGLKQ
Sbjct: 663 RQLDVQNAFLHGILEEEVYMKQTPGYENSKFPNHICKLDKAIYGLKQ 709
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 63.5 bits (153), Expect(2) = 3e-19
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ AL W +AM E+ L+ N TW LVPY +I K ++K+K D +LD+
Sbjct: 937 PQNDKEALGDKNWRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDR 996
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF+ G+D
Sbjct: 997 YKARLVAKGFKQRYGID 1013
Score = 57.0 bits (136), Expect(2) = 3e-19
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+G LE+++YM QP FE + P+YVCK ++LYGLKQ
Sbjct: 1042 RQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQ 1088
>emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]
Length = 1884
Score = 67.4 bits (163), Expect(2) = 4e-19
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = -2
Query: 369 PECTVVALTSPPWIEAMRAEFQTLVDNQTWDLVPYTDDMKVISNK*IFKVKTHVDDSLDK 190
P+ AL P W++AM+ E + L+ N+TWDLVP ++ +K +FK K D ++D+
Sbjct: 921 PKTYRTALKIPHWLKAMQEEIKALIQNRTWDLVPRPPTTNIVGSKWVFKTKLKEDGTIDR 980
Query: 189 LKVRLVAWGFE*FDGVD 139
K RLVA GF G+D
Sbjct: 981 YKARLVARGFSQIPGLD 997
Score = 52.8 bits (125), Expect(2) = 4e-19
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -1
Query: 142 RLLYINNVFLNGVLEDKIYMTQPTCFEDAQYPNYVCKPKRSLYGLKQ 2
R L + N FL+G L+++++M QP F + PN+VCK RSLYGLKQ
Sbjct: 1026 RQLDVKNAFLHGFLKEEVFMEQPPGFINEVLPNHVCKLNRSLYGLKQ 1072