BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00049810
         (289 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    86   5e-15
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...    78   1e-12
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    75   7e-12
dbj|BAD43406.1| hypothetical protein [Arabidopsis thaliana]            72   1e-10
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    72   1e-10
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    71   2e-10
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...    70   2e-10
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]    70   4e-10
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]    69   5e-10
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi...    69   5e-10
gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]         67   3e-09
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]                65   1e-08
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    64   3e-08
emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]    63   4e-08
ref|XP_004498023.1| PREDICTED: uncharacterized protein LOC101511...    63   5e-08
emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]    63   5e-08
emb|CAN76630.1| hypothetical protein VITISV_032334 [Vitis vinifera]    62   6e-08
emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabido...    62   1e-07
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia...    60   2e-07
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    60   3e-07

>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 13/104 (12%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLDSH-PVIS--SVLSIN*WHSRLGHPSFDKLKSMSSVIPIS-- 122
           +KG  +G G R+GNLYVLD+  P IS  +V+ ++ WH RLGHPSF +L S+S V+  +  
Sbjct: 534 TKGLTLGEGKRIGNLYVLDTQSPAISVNAVVDVSVWHKRLGHPSFSRLDSLSEVLGTTRH 593

Query: 121 -NSQTEICHV-------KLPFPLSSSIADLPFDLIDCDVWGPFT 14
            N ++  CHV       KL FP +++I +  F+L+  DVWGPF+
Sbjct: 594 KNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFS 637


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 20/107 (18%)
 Frame = -1

Query: 274 MIGMGHRLGNLYVLD----SHP------VISSVLSIN*WHSRLGHPSFDKLKSMSSVI-- 131
           M+GMG ++ NLY++D    SHP       ++SV S + WH RLGHPS  KL+ MSS++  
Sbjct: 369 MVGMGKQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPMSSLLSF 428

Query: 130 PISNSQTE----ICHVK----LPFPLSSSIADLPFDLIDCDVWGPFT 14
           P   + T+    +CH+     LPF   ++ +  PFDLI  D WGPF+
Sbjct: 429 PKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWGPFS 475


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 13/103 (12%)
 Frame = -1

Query: 283 KGKMIGMGHRLGNLYVLD---SHPVISSVLSIN*WHSRLGHPSFDKLKSMSSVIPIS--- 122
           KG+M+G G R+ NLY+LD       +++V+ I+ WH RLGH S  +L ++S  +  +   
Sbjct: 524 KGRMLGQGRRVANLYLLDVGDQSISVNAVVDISMWHRRLGHASLQRLDAISDSLGTTRHK 583

Query: 121 NSQTEICHV-------KLPFPLSSSIADLPFDLIDCDVWGPFT 14
           N  ++ CHV       KL FP S+ +    FDL+  DVWGPF+
Sbjct: 584 NKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFS 626


>dbj|BAD43406.1| hypothetical protein [Arabidopsis thaliana]
          Length = 161

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 13/99 (13%)
 Frame = -1

Query: 271 IGMGHRLGNLYVLDSH-PVIS--SVLSIN*WHSRLGHPSFDKLKSMSSVIPIS------N 119
           IG G R+GNLYVLD+  P IS  +V+ +  W+ RLGHPS+ +L  +S  +  S      N
Sbjct: 55  IGKGRRIGNLYVLDTKTPSISLNAVVDVGMWNRRLGHPSYSRLDVLSEDLGTSKHKNKDN 114

Query: 118 SQTEICHV----KLPFPLSSSIADLPFDLIDCDVWGPFT 14
           S    CH+    KL FP  ++I +  F+L+  DVWGPF+
Sbjct: 115 SYCHDCHLAKHRKLYFPSGNNICNSAFELLHIDVWGPFS 153


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
          Length = 1131

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 13/104 (12%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLD--SHPV-ISSVLSIN*WHSRLGHPSFDKLKSMSSVIPIS-- 122
           +KG  IG G R+ NLYVLD  S P+ I++V+ I+ WH RLGHPS+ +L  +S  +  +  
Sbjct: 483 TKGWTIGQGRRVANLYVLDVKSSPMKINAVVDISLWHKRLGHPSYTRLDKISEALGTTKH 542

Query: 121 ----NSQTEICHV----KLPFPLSSSIADLPFDLIDCDVWGPFT 14
               ++   +CH+    KL +   + I    F L+  DVWGPF+
Sbjct: 543 KNKGDAHCHVCHLAKQKKLSYSSQNHICTASFQLLHVDVWGPFS 586


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
 Frame = -1

Query: 280  GKMIGMGHRLGNLYVLDSHPVISSVLSIN*----WHSRLGHPSFDKLKSMSSVIPISNSQ 113
            GKMIG G + G LY +      S V  ++     WH RLGHPSF + K +S ++P  + +
Sbjct: 736  GKMIGSGKQRGGLYYMHPSTNKSVVFHVSQPSDLWHLRLGHPSFSRFKLLSRLLPDIHKE 795

Query: 112  T----EIC----HVKLPFPLSSSIADLPFDLIDCDVWGP 20
                  IC      +LPFP SS     PF L+ CDVWGP
Sbjct: 796  IGNHCPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGP 834


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 18/105 (17%)
 Frame = -1

Query: 277  KMIGMGHRLGNLYVLD---------SHPVISSVLSIN*WHSRLGHPSFDKLKSMSSVIPI 125
            K IG       LY+L           H  +   +S + WH R+GHPS  ++K ++ +I I
Sbjct: 1759 KTIGKAELTNGLYLLRMKNEKVNCIQHTALMCKVSASMWHKRMGHPSISRIKELAKMIEI 1818

Query: 124  SNSQT--EICHV-------KLPFPLSSSIADLPFDLIDCDVWGPF 17
            S+     E+CH+       +L FP+ ++IA+  FDLI CD+WGPF
Sbjct: 1819 SDFPNCKEVCHICPLAKQRRLSFPILNNIAENIFDLIHCDIWGPF 1863



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 9/67 (13%)
 Frame = -1

Query: 190 WHSRLGHPSFDKLKSMSSVIPISNSQT--EICHV-------KLPFPLSSSIADLPFDLID 38
           WH R+GHPS  ++K ++ +I IS+     E+ H+       +L FP+ ++IA+  F+LI 
Sbjct: 372 WHKRMGHPSISRIKELAKMIEISDFPNCKEVYHICPLAKQRRLSFPILNNIAENVFELIH 431

Query: 37  CDVWGPF 17
           CD+WGPF
Sbjct: 432 CDIWGPF 438


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLDSHPVI-------------SSVLSIN*WHSRLGHPSFDKLKS 146
           S+GKMIG G R G LY LD    +             S++LS+  WHSRLGHPSF +LK 
Sbjct: 373 SRGKMIGKGSRKGQLYQLDFDSFVADKAFVAASRIPTSNILSL--WHSRLGHPSFSRLKG 430

Query: 145 MSSVIPISNS----QTEICHVK----LPFPLSSSIADLPFDLIDCDVWGPFT 14
           + SV+   +S       +C +     LP+   +      FDL+  D+WGPF+
Sbjct: 431 LQSVLDFDSSFDLTPCNVCPLAKQRCLPYISLNKRCSSTFDLLHLDIWGPFS 482


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLDSHPVI-------------SSVLSIN*WHSRLGHPSFDKLKS 146
           S+GKMIG G R G LY LD    +             S++LS+  WHSRLGHPSF +LK 
Sbjct: 372 SRGKMIGKGSRKGQLYQLDFDSFVADKAFVAASRIPTSNILSL--WHSRLGHPSFSRLKG 429

Query: 145 MSSVIPISNS----QTEICHVK----LPFPLSSSIADLPFDLIDCDVWGPFT 14
           + SV+   +S       +C +     LP+   +      FDL+  D+WGPF+
Sbjct: 430 LQSVLDFDSSFDLTPCXVCPLAKQRCLPYISLNKRCSSTFDLLHLDIWGPFS 481


>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
 Frame = -1

Query: 283 KGKMIGMGHRLGNLYVLD---SHPVISSVLSIN*WHSRLGHPSFDKLKSMSSVIPIS--- 122
           KG+M+G G R+ NLYV+D   ++  +++V+ I+ WH+RL H S  +L  +S  +  +   
Sbjct: 383 KGRMLGHGRRVANLYVMDVEDTNVSVNAVVDISTWHNRLRHASLQRLDVISESLGTTKHK 442

Query: 121 NSQTEICHV-------KLPFPLSSSIADLPFDLIDCDVWGPFT 14
           N  ++ CHV       KL FP  +++ +  F+++  D+WGPF+
Sbjct: 443 NKGSDYCHVCHLAKHRKLSFPSQNNVCNEIFEMLHIDIWGPFS 485


>gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]
          Length = 937

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
 Frame = -1

Query: 283 KGKMIGMGHRLGNLYVLDSHPVI--SSVLSIN*WHSRLGHPSFDKLKSMSSVIPIS---N 119
           KG MI  G R+ NLYVLD+   I  + V+ +  WH R GHPS+ +L  +S V+  +   N
Sbjct: 445 KGLMIEKGRRVANLYVLDTEEKIQVNVVVDVVMWHKRFGHPSYSRLDVISKVLGTTKHKN 504

Query: 118 SQTEICH-------VKLPFPLSSSIADLPFDLIDCDVWGPFT 14
            ++  CH       +KL +   +++  + F+L+  DVWGPF+
Sbjct: 505 KKSAYCHIYHLAKQIKLFYVSPNNMCKIIFELLHIDVWGPFS 546


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 24/115 (20%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLDSHPVISSVLSI-------------N*WHSRLGHPSFDKLKS 146
           +K  M+G G ++GNLY+L+    +  V S                WH RLGHPSF K+ +
Sbjct: 513 TKELMLGKGSQVGNLYILNLDKSLVDVSSFPGKSVCSSVKNESEMWHKRLGHPSFAKIDT 572

Query: 145 MSSVIPI-------SNSQTEICHVK----LPFPLSSSIADLPFDLIDCDVWGPFT 14
           +S V+ +        +S   +CH+     LPF   + I +  F+L+  D WGPF+
Sbjct: 573 LSDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSVNHIREKAFELVHIDTWGPFS 627


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 27/120 (22%)
 Frame = -1

Query: 283 KGKMIGMGHRLGNLYVLDSHPVISSVLSIN*----------------WHSRLGHPSFDKL 152
           K + IG G+++G LYVLD+  V  + + IN                 WHSRLGHPS++K 
Sbjct: 539 KEQKIGRGNQIGGLYVLDTSSVECTSVDINSSVTEKQYCNAVVDSALWHSRLGHPSYEKN 598

Query: 151 KSMSSVIPISNSQTE------ICHVK----LPFPLSSSIADLPFDLIDCDVWGPF-TPCT 5
             +  V+ +     E      IC       L FP  +++++  FDLI  D WGPF TP T
Sbjct: 599 DVLHDVLGLPKRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTT 658


>emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]
          Length = 987

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/90 (37%), Positives = 48/90 (53%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLDSHPVISSVLSIN*WHSRLGHPSFDKLKSMSSVIPISNSQTE 107
           S+GK+IGMG R GNLY+LDS                         +S+S V  + N+ + 
Sbjct: 374 SQGKLIGMGRRQGNLYLLDS----------------------SXFRSISFVFVVDNNTS- 410

Query: 106 ICHVKLPFPLSSSIADLPFDLIDCDVWGPF 17
             H +LPF   ++++  PFDLI CD+WGPF
Sbjct: 411 -AHKRLPFDCHNNLSPSPFDLIHCDIWGPF 439


>ref|XP_004498023.1| PREDICTED: uncharacterized protein LOC101511025 [Cicer arietinum]
          Length = 852

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
 Frame = -1

Query: 196 N*WHSRLGHPSFDKLKSMSSVIPI-----SNSQTEIC----HVKLPFPLSSSIADLPFDL 44
           N WH+ LGH SFD L  M+   P      S S  ++C    H +LPFP S+ IAD  FDL
Sbjct: 534 NIWHNLLGHASFDVLNHMNKSFPFVRISKSISPCDVCFHAKHKRLPFPNSTIIADCCFDL 593

Query: 43  IDCDVWGPFT 14
           I  D+WGPF+
Sbjct: 594 IHMDIWGPFS 603


>emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
          Length = 1240

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/90 (37%), Positives = 48/90 (53%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLDSHPVISSVLSIN*WHSRLGHPSFDKLKSMSSVIPISNSQTE 107
           S+GK+IGMG R GNLY+LDS                         +S+S V  + N+ + 
Sbjct: 374 SQGKLIGMGRRQGNLYLLDS----------------------SVFRSISFVFVVDNNTS- 410

Query: 106 ICHVKLPFPLSSSIADLPFDLIDCDVWGPF 17
             H +LPF   ++++  PFDLI CD+WGPF
Sbjct: 411 -AHKRLPFDCHNNLSPSPFDLIHCDIWGPF 439


>emb|CAN76630.1| hypothetical protein VITISV_032334 [Vitis vinifera]
          Length = 540

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 21/105 (20%)
 Frame = -1

Query: 271 IGMGHRLGNLYVLD-SHPVISSVLSIN*-------WHSRLGHPSFDKLKSMSS--VIPIS 122
           +G+G     LYVLD +H  + S++S N        WH+RLGHPSF  + S+S    I  S
Sbjct: 418 LGVGRCENGLYVLDQNHHALVSIVSSNKSCASVPLWHARLGHPSFRTINSLSKSGFISCS 477

Query: 121 NS----QTEIC-------HVKLPFPLSSSIADLPFDLIDCDVWGP 20
           N      + +C       + +LPF L+++   LPFD + CD+WGP
Sbjct: 478 NKLMGLDSSLCVGCNLGKNHRLPFSLNNNRCPLPFDRLHCDLWGP 522


>emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabidopsis thaliana]
           gi|7268775|emb|CAB78981.1| putative LTR retrotransposon
           (fragment) [Arabidopsis thaliana]
          Length = 281

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 32/123 (26%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLDSHP------------------VISSVL--SIN*WHSRLGHP 167
           +K  MIG G  +GNLYVLD +                   V SSV+  S+  WH RLGHP
Sbjct: 95  TKELMIGRGSEVGNLYVLDFNENNHIVSLKGTASMCPEFSVCSSVVVDSVT-WHKRLGHP 153

Query: 166 SFDKLKSMSSVI-----PISNSQTEICHV-------KLPFPLSSSIADLPFDLIDCDVWG 23
           ++ K+  +S V+      I+   + +CHV        L F    ++    FDL+  D WG
Sbjct: 154 AYSKIDLLSDVLNLKDKKINKEHSPVCHVCHLSKQKHLSFQYRQNMCSAAFDLVHIDTWG 213

Query: 22  PFT 14
           PF+
Sbjct: 214 PFS 216


>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268497|emb|CAB78748.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1433

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 35/126 (27%)
 Frame = -1

Query: 286 SKGKMIGMGHRLGNLYVLDSHP------------------VISSVL--SIN*WHSRLGHP 167
           +K  MIG G ++GNLYVLD +                   V SSV+  S+  WH RLGHP
Sbjct: 502 TKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPEFSVCSSVVVDSVT-WHKRLGHP 560

Query: 166 SFDKLKSMSSVI-----PISNSQTEICHV----------KLPFPLSSSIADLPFDLIDCD 32
           ++ K+  +S V+      I+   + +CHV           L F    ++    FDL+  D
Sbjct: 561 AYSKIDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQKHLSFQSRQNMCSAAFDLVHID 620

Query: 31  VWGPFT 14
            WGPF+
Sbjct: 621 TWGPFS 626


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
 Frame = -1

Query: 277 KMIGMGHRLGNLYVL--DSHPVISSVLS--IN*WHSRLGHPSFDKLKSMSSVIPI----S 122
           K IG+G +   LY L  D +P ++  +    + WH RLGHPS   L+ ++ V P     S
Sbjct: 506 KTIGLGKQHNGLYYLAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNPKIYFDS 565

Query: 121 NSQTEIC----HVKLPFPLSSSIADLPFDLIDCDVWGP 20
               +IC      +L FP S   +  PFDLI CD+WGP
Sbjct: 566 KHVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGP 603